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Search of human proteins with 151101235
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|151101235 TERF1 (TRF1)-interacting nuclear factor 2 isoform
2 [Homo sapiens]
(354 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|151101266 TERF1 (TRF1)-interacting nuclear factor 2 isoform 1... 718 0.0
gi|151101235 TERF1 (TRF1)-interacting nuclear factor 2 isoform 2... 718 0.0
gi|19923830 pre-B-cell leukemia homeobox interacting protein 1 [... 34 0.23
gi|27886667 potassium voltage-gated channel, subfamily H, member... 32 0.86
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 32 0.86
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 32 0.86
gi|169215700 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|169216113 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|169215489 PREDICTED: hypothetical protein [Homo sapiens] 32 1.1
gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens] 32 1.1
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 31 1.5
gi|33188443 microfilament and actin filament cross-linker protei... 31 1.9
gi|114431236 zinc finger protein 462 [Homo sapiens] 31 1.9
gi|32307175 KIAA1737 protein [Homo sapiens] 31 1.9
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 31 1.9
gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens] 30 2.5
gi|157909822 pragmin [Homo sapiens] 30 2.5
gi|25168263 serum/glucocorticoid regulated kinase 1 isoform 1 [H... 30 3.3
gi|219521880 serum/glucocorticoid regulated kinase 1 isoform 4 [... 30 3.3
gi|219521878 serum/glucocorticoid regulated kinase 1 isoform 3 [... 30 3.3
gi|219521876 serum/glucocorticoid regulated kinase 1 isoform 2 [... 30 3.3
gi|71040094 ADP-ribosylation factor interacting protein 1 isofor... 30 3.3
gi|71040092 ADP-ribosylation factor interacting protein 1 isofor... 30 3.3
gi|7657210 ADP-ribosylation factor interacting protein 1 isoform... 30 3.3
gi|121582655 ankyrin repeat domain 35 [Homo sapiens] 30 3.3
gi|7661864 USP6 N-terminal like isoform 1 [Homo sapiens] 30 4.3
gi|122937432 USP6 N-terminal like isoform 2 [Homo sapiens] 30 4.3
gi|42544161 forkhead box M1 isoform 3 [Homo sapiens] 30 4.3
gi|42544165 forkhead box M1 isoform 2 [Homo sapiens] 30 4.3
gi|42544167 forkhead box M1 isoform 1 [Homo sapiens] 30 4.3
>gi|151101266 TERF1 (TRF1)-interacting nuclear factor 2 isoform 1
[Homo sapiens]
Length = 451
Score = 718 bits (1853), Expect = 0.0
Identities = 354/354 (100%), Positives = 354/354 (100%)
Query: 1 MATPLVAGPAALRFAAAASWQVVRGRCVEHFPRVLEFLRSLRAVAPGLVRYRHHERLCMG 60
MATPLVAGPAALRFAAAASWQVVRGRCVEHFPRVLEFLRSLRAVAPGLVRYRHHERLCMG
Sbjct: 1 MATPLVAGPAALRFAAAASWQVVRGRCVEHFPRVLEFLRSLRAVAPGLVRYRHHERLCMG 60
Query: 61 LKAKVVVELILQGRPWAQVLKALNHHFPESGPIVRDPKATKQDLRKILEAQETFYQQVKQ 120
LKAKVVVELILQGRPWAQVLKALNHHFPESGPIVRDPKATKQDLRKILEAQETFYQQVKQ
Sbjct: 61 LKAKVVVELILQGRPWAQVLKALNHHFPESGPIVRDPKATKQDLRKILEAQETFYQQVKQ 120
Query: 121 LSEAPVDLASKLQELEQEYGEPFLAAMEKLLFEYLCQLEKALPTPQAQQLQDVLSWMQPG 180
LSEAPVDLASKLQELEQEYGEPFLAAMEKLLFEYLCQLEKALPTPQAQQLQDVLSWMQPG
Sbjct: 121 LSEAPVDLASKLQELEQEYGEPFLAAMEKLLFEYLCQLEKALPTPQAQQLQDVLSWMQPG 180
Query: 181 VSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQQQRLALHNPLPKAKPGTHL 240
VSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQQQRLALHNPLPKAKPGTHL
Sbjct: 181 VSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQQQRLALHNPLPKAKPGTHL 240
Query: 241 PQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVI 300
PQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVI
Sbjct: 241 PQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVI 300
Query: 301 SKPESKEEHAIYTADLAMGTRAASTGKSKSPCQTLGGRALKENPVDLPATEQKE 354
SKPESKEEHAIYTADLAMGTRAASTGKSKSPCQTLGGRALKENPVDLPATEQKE
Sbjct: 301 SKPESKEEHAIYTADLAMGTRAASTGKSKSPCQTLGGRALKENPVDLPATEQKE 354
>gi|151101235 TERF1 (TRF1)-interacting nuclear factor 2 isoform 2
[Homo sapiens]
Length = 354
Score = 718 bits (1853), Expect = 0.0
Identities = 354/354 (100%), Positives = 354/354 (100%)
Query: 1 MATPLVAGPAALRFAAAASWQVVRGRCVEHFPRVLEFLRSLRAVAPGLVRYRHHERLCMG 60
MATPLVAGPAALRFAAAASWQVVRGRCVEHFPRVLEFLRSLRAVAPGLVRYRHHERLCMG
Sbjct: 1 MATPLVAGPAALRFAAAASWQVVRGRCVEHFPRVLEFLRSLRAVAPGLVRYRHHERLCMG 60
Query: 61 LKAKVVVELILQGRPWAQVLKALNHHFPESGPIVRDPKATKQDLRKILEAQETFYQQVKQ 120
LKAKVVVELILQGRPWAQVLKALNHHFPESGPIVRDPKATKQDLRKILEAQETFYQQVKQ
Sbjct: 61 LKAKVVVELILQGRPWAQVLKALNHHFPESGPIVRDPKATKQDLRKILEAQETFYQQVKQ 120
Query: 121 LSEAPVDLASKLQELEQEYGEPFLAAMEKLLFEYLCQLEKALPTPQAQQLQDVLSWMQPG 180
LSEAPVDLASKLQELEQEYGEPFLAAMEKLLFEYLCQLEKALPTPQAQQLQDVLSWMQPG
Sbjct: 121 LSEAPVDLASKLQELEQEYGEPFLAAMEKLLFEYLCQLEKALPTPQAQQLQDVLSWMQPG 180
Query: 181 VSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQQQRLALHNPLPKAKPGTHL 240
VSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQQQRLALHNPLPKAKPGTHL
Sbjct: 181 VSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQQQRLALHNPLPKAKPGTHL 240
Query: 241 PQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVI 300
PQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVI
Sbjct: 241 PQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVI 300
Query: 301 SKPESKEEHAIYTADLAMGTRAASTGKSKSPCQTLGGRALKENPVDLPATEQKE 354
SKPESKEEHAIYTADLAMGTRAASTGKSKSPCQTLGGRALKENPVDLPATEQKE
Sbjct: 301 SKPESKEEHAIYTADLAMGTRAASTGKSKSPCQTLGGRALKENPVDLPATEQKE 354
>gi|19923830 pre-B-cell leukemia homeobox interacting protein 1
[Homo sapiens]
Length = 731
Score = 33.9 bits (76), Expect = 0.23
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 89 ESGPIVRDPKATKQDLRKILEAQ-----ETFYQQVKQLSEAPVDLASKLQELEQEYGEPF 143
E GP ++P+ + ++ LEA+ + +Q + L DL LQ+ + G+P
Sbjct: 368 EQGPREQEPELSFLKQKEQLEAEAQALRQELERQRRLLGSVQQDLERSLQDASR--GDPA 425
Query: 144 LAAMEKLLFEYLCQLEKALPTPQAQQLQDVLSWMQ-PGVSITSSLAWRQ 191
A + +L AQ+LQ + +W Q PGVS +S AW Q
Sbjct: 426 HAGLAELGHRL------------AQKLQGLENWGQDPGVSANASKAWHQ 462
>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
[Homo sapiens]
Length = 1107
Score = 32.0 bits (71), Expect = 0.86
Identities = 43/154 (27%), Positives = 60/154 (38%), Gaps = 24/154 (15%)
Query: 88 PESGPIVRDPKA--TKQDLRKILEAQETFYQQVKQLSEAPVDLASKLQELEQEYGEPFLA 145
PE G V KA TKQ + K+ T Q+V QL + D+ + +Q LE L+
Sbjct: 849 PEIGAAVLFIKAEETKQQINKLNSEVTTLTQEVSQLGK---DMRNVIQLLEN-----VLS 900
Query: 146 AMEKLLFEYLCQLEKALPTPQAQQLQDVLSWM--QPGVSI-TSSLAWRQYGVDMG----- 197
+ F C L P + LQ SW QP + + T A+ Q +
Sbjct: 901 PQQPSRF---CSLHSTSVCPSRESLQTRTSWSAHQPCLHLQTGGAAYTQAQLCSSNITSD 957
Query: 198 -WLLPECSVTDSVNLAEPMEQNPPQQQRLALHNP 230
W + SV S EQNP + H+P
Sbjct: 958 IWSVDPSSVGSSPQRTGAHEQNPADSE--LYHSP 989
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 32.0 bits (71), Expect = 0.86
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 25/160 (15%)
Query: 214 PMEQNPPQQQ------RLALHNPL-PKAKPGTHLPQGPSSRTHPEP-----------LAG 255
P++++P ++ R L P P PG P GP+S T E +G
Sbjct: 806 PLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSG 865
Query: 256 RHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVISKPESKEEHAIYTAD 315
A G ++ + +E P F NL V +P+ +E + TA
Sbjct: 866 EGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDF-NLTESDTVKRRPKCREREPLQTAL 924
Query: 316 LAMGTRAASTG-----KSKSPCQTLGGRALKE-NPVDLPA 349
LA G +A+ G S +P ++ +L + P LPA
Sbjct: 925 LAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPA 964
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 32.0 bits (71), Expect = 0.86
Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 25/160 (15%)
Query: 214 PMEQNPPQQQ------RLALHNPL-PKAKPGTHLPQGPSSRTHPEP-----------LAG 255
P++++P ++ R L P P PG P GP+S T E +G
Sbjct: 888 PLDESPGPKEGATGPRRRTLSEPAGPSEPPGPPAPAGPASDTEEEEPGPEGTPPSRGSSG 947
Query: 256 RHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVISKPESKEEHAIYTAD 315
A G ++ + +E P F NL V +P+ +E + TA
Sbjct: 948 EGLPFAEEGNLTIKQRPKPAGPPPRETPVPPGLDF-NLTESDTVKRRPKCREREPLQTAL 1006
Query: 316 LAMGTRAASTG-----KSKSPCQTLGGRALKE-NPVDLPA 349
LA G +A+ G S +P ++ +L + P LPA
Sbjct: 1007 LAFGVASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPA 1046
>gi|169215700 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 177 MQPGVSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQ-QQRLALHNPLPKAK 235
+Q G+S++ S A D+ + + + +P+E NP LAL +P
Sbjct: 221 LQTGISLSPSAACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASAT- 279
Query: 236 PGTHLPQGPSSRTHPEPLAGRHFNLAPL 263
GP + T P PL G H L PL
Sbjct: 280 ------MGPEASTSPPPLPGSHRLLEPL 301
>gi|169216113 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 177 MQPGVSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQ-QQRLALHNPLPKAK 235
+Q G+S++ S A D+ + + + +P+E NP LAL +P
Sbjct: 221 LQTGISLSPSAACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASAT- 279
Query: 236 PGTHLPQGPSSRTHPEPLAGRHFNLAPL 263
GP + T P PL G H L PL
Sbjct: 280 ------MGPEASTSPPPLPGSHRLLEPL 301
>gi|169215489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 31.6 bits (70), Expect = 1.1
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
Query: 177 MQPGVSITSSLAWRQYGVDMGWLLPECSVTDSVNLAEPMEQNPPQ-QQRLALHNPLPKAK 235
+Q G+S++ S A D+ + + + +P+E NP LAL +P
Sbjct: 221 LQTGISLSPSAACSLQRDDLATYYYQQHYSYPPTVLQPLEWNPGNGAASLALLSPASAT- 279
Query: 236 PGTHLPQGPSSRTHPEPLAGRHFNLAPL 263
GP + T P PL G H L PL
Sbjct: 280 ------MGPEASTSPPPLPGSHRLLEPL 301
>gi|21536415 bridging integrator 1 isoform 9 [Homo sapiens]
Length = 439
Score = 31.6 bits (70), Expect = 1.1
Identities = 47/206 (22%), Positives = 75/206 (36%), Gaps = 38/206 (18%)
Query: 99 ATKQDLRKILEAQETFYQQVKQLSEAPVDLASKLQELEQE----YGEPF--LAAMEKLLF 152
A K+D KI +A+E + K E VDL +L L Y F +A +E+
Sbjct: 163 AKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFH 222
Query: 153 EYLCQLEKALPTPQAQQLQDVLSWMQPGVSITSSLAWRQYGVDMGWLLPECSVTDSVNLA 212
+ + +L Q L DVL ++ +Q+G + + +D+
Sbjct: 223 KEMSKLN--------QNLNDVLVGLE-----------KQHGSNT--FTVKAQPSDNAPAK 261
Query: 213 EPMEQNPPQQQRLAL------HNPLPK--AKPGTHLPQGPSSRTHPEPLAGRHFNLAPLG 264
+PP A H P P A PG LP+ PS +AG P
Sbjct: 262 GNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPAEASEVAG---GTQPAA 318
Query: 265 RRRVQSQWASTRGGHKERPTVMLFPF 290
+ + A++ P V++ F
Sbjct: 319 GAQEPGETAASEAASSSLPAVVVETF 344
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 31.2 bits (69), Expect = 1.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 98 KATKQDLRKILEAQETFYQQVKQLSEAPVDLASKLQELEQEYGEPFLAAMEKLLFEYL 155
K++++ + K+ + E K+L+ +L KLQ E+E+ E A+EK EYL
Sbjct: 472 KSSEEQIAKLQKLHE------KELARKEQELTKKLQTREREFQEQMKVALEKSQSEYL 523
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 30.8 bits (68), Expect = 1.9
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 97 PKATKQDLRKILEAQETFYQQVKQLSEAPVD-LASKLQELEQEYGEPFLAAMEKLL---F 152
P+ +Q LR + E Q +F Q + + + A VD L LQ++EQE L +
Sbjct: 2000 PQQNRQMLRLLNELQRSF-QDILEQTAAQVDALQGHLQQMEQEALVKTLQKQQNTCHQQL 2058
Query: 153 EYLC----QLEKALPTPQAQQLQDVLSWMQPGVS 182
E LC Q E+AL Q + Q LS +Q S
Sbjct: 2059 EDLCSWVGQAERALAGHQGRTTQQDLSALQKNQS 2092
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 30.8 bits (68), Expect = 1.9
Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 19/144 (13%)
Query: 81 KALNHHFPESGPIVRDPKATKQDLRKILEAQETFYQQVKQLSEAPVDLASKLQELEQEYG 140
++++ H+ P + K R IL+ + + V + E +D + ++L+Q YG
Sbjct: 856 RSVSTHYQRMHPYI------KFSFRYILDPND--HSAVYRCLECYIDYTN-FEDLQQHYG 906
Query: 141 EPFLAAMEKLLFE-----YLCQLEKALPTPQAQQLQDVLSWMQPGVSITSSLAWRQYGVD 195
E AM L F+ Y C+ + +P + L M P V I +++ + Y V+
Sbjct: 907 EHHPEAMNVLNFDHSDLIYRCRF-CSYTSPNVRSLMPHYQRMHPTVKINNAMIFSSYVVE 965
Query: 196 MGWLLPECSVTDSVNLAEPMEQNP 219
E T+S L E + P
Sbjct: 966 Q----QEGLNTESQTLREILNSAP 985
>gi|32307175 KIAA1737 protein [Homo sapiens]
Length = 399
Score = 30.8 bits (68), Expect = 1.9
Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Query: 221 QQQRLALHNPLPKAKPGTHLPQGPSSRTHPEPLAGRHFNLAPLGRRRVQS---QWASTRG 277
Q Q L LH P+P H + S + P+ + +AP +R S + T G
Sbjct: 124 QPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSG 183
Query: 278 GHKERPTVMLFPFRNLGSPTQVISKPESKEEHAIYTADLA 317
K+ T L P + PT+ + P S A +A LA
Sbjct: 184 VQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLA 223
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 30.8 bits (68), Expect = 1.9
Identities = 28/98 (28%), Positives = 36/98 (36%), Gaps = 11/98 (11%)
Query: 216 EQNPPQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWAST 275
E+ PPQ + P P KP PQG + P P G+ P G QSQ
Sbjct: 100 ERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGN--QSQGPPP 157
Query: 276 RGGHKERP---------TVMLFPFRNLGSPTQVISKPE 304
G E P + P + G P Q +KP+
Sbjct: 158 HPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQ 195
Score = 30.4 bits (67), Expect = 2.5
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 219 PPQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWASTRGG 278
PPQ + P P KP PQG + P P G+ P G QSQ G
Sbjct: 61 PPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGN--QSQGTPPPPG 118
Query: 279 HKERP 283
ERP
Sbjct: 119 KPERP 123
Score = 28.5 bits (62), Expect = 9.5
Identities = 23/70 (32%), Positives = 26/70 (37%), Gaps = 8/70 (11%)
Query: 214 PMEQNPPQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEPLAGRHFNLAPLGRRRVQSQWA 273
P N PQ+ P P KP PQG + P P G+ P G QSQ
Sbjct: 41 PQGGNQPQRP------PPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGN--QSQGP 92
Query: 274 STRGGHKERP 283
G ERP
Sbjct: 93 PPHPGKPERP 102
>gi|4757748 bridging integrator 1 isoform 8 [Homo sapiens]
Length = 454
Score = 30.4 bits (67), Expect = 2.5
Identities = 49/208 (23%), Positives = 76/208 (36%), Gaps = 27/208 (12%)
Query: 99 ATKQDLRKILEAQETFYQQVKQLSEAPVDLASKLQELEQE----YGEPF--LAAMEKLLF 152
A K+D KI +A+E + K E VDL +L L Y F +A +E+
Sbjct: 163 AKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFH 222
Query: 153 EYLCQLEKALPTPQAQQLQDVLSWM--QPGVSITSSLAWRQYGVDMGWLLPECSVTDSVN 210
+ + +L Q L DVL + Q G + + A + + L +D+
Sbjct: 223 KEMSKLN--------QNLNDVLVGLEKQHGSNTFTVKAQPRKKSKLFSRLRRKKNSDNAP 274
Query: 211 LAEPMEQNPPQQQRLAL------HNPLPK--AKPGTHLPQGPSSRTHPEPLAGRHFNLAP 262
+PP A H P P A PG LP+ PS +AG P
Sbjct: 275 AKGNKSPSPPDGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQPAEASEVAG---GTQP 331
Query: 263 LGRRRVQSQWASTRGGHKERPTVMLFPF 290
+ + A++ P V++ F
Sbjct: 332 AAGAQEPGETAASEAASSSLPAVVVETF 359
>gi|157909822 pragmin [Homo sapiens]
Length = 1402
Score = 30.4 bits (67), Expect = 2.5
Identities = 42/202 (20%), Positives = 73/202 (36%), Gaps = 14/202 (6%)
Query: 137 QEYGEPFLAAMEKLLFEYLCQLEKALPTPQAQQLQ-DVLSWMQPGVSITSSLAWRQYGVD 195
Q P A + ++ + +KA P P Q + + + Q + + AW Q
Sbjct: 396 QPPAHPREATQPEPIYAESTKRKKAAPVPSKSQAKIEHAAAAQGQGQVCTGNAWAQKAAS 455
Query: 196 MGWLLPECSVTDSVNLAEPMEQNPPQQQRLALHNPLPKAKPGTHLPQGPSSRT----HPE 251
GW T V+ + P++ ++ P + G P+GP S+ E
Sbjct: 456 -GWGRDSPDPTPQVSATITVMAAHPEEDHRTIYLSSPDSAVGVQWPRGPVSQNSEVGEEE 514
Query: 252 PLAGRHFNLAPLGRRRVQSQWASTRGGHKERPTVMLFPFRNLGSPTQVISKPESKEEHAI 311
AG+ + R +++ KERP + P + SP P +
Sbjct: 515 TSAGQGLS------SRESHAHSASESKPKERPAIP--PKLSKSSPVGSPVSPSAGGPPVS 566
Query: 312 YTADLAMGTRAASTGKSKSPCQ 333
ADL+ G+ S+ + P Q
Sbjct: 567 PLADLSDGSSGGSSIGPQPPSQ 588
>gi|25168263 serum/glucocorticoid regulated kinase 1 isoform 1 [Homo
sapiens]
Length = 431
Score = 30.0 bits (66), Expect = 3.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 220 PQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEP 252
PQ+ L NP P P + GPSS H +P
Sbjct: 63 PQEPELMNANPSPPPSPSQQINLGPSSNPHAKP 95
>gi|219521880 serum/glucocorticoid regulated kinase 1 isoform 4
[Homo sapiens]
Length = 445
Score = 30.0 bits (66), Expect = 3.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 220 PQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEP 252
PQ+ L NP P P + GPSS H +P
Sbjct: 77 PQEPELMNANPSPPPSPSQQINLGPSSNPHAKP 109
>gi|219521878 serum/glucocorticoid regulated kinase 1 isoform 3
[Homo sapiens]
Length = 459
Score = 30.0 bits (66), Expect = 3.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 220 PQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEP 252
PQ+ L NP P P + GPSS H +P
Sbjct: 91 PQEPELMNANPSPPPSPSQQINLGPSSNPHAKP 123
>gi|219521876 serum/glucocorticoid regulated kinase 1 isoform 2
[Homo sapiens]
Length = 526
Score = 30.0 bits (66), Expect = 3.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 220 PQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEP 252
PQ+ L NP P P + GPSS H +P
Sbjct: 158 PQEPELMNANPSPPPSPSQQINLGPSSNPHAKP 190
>gi|71040094 ADP-ribosylation factor interacting protein 1 isoform 1
[Homo sapiens]
Length = 373
Score = 30.0 bits (66), Expect = 3.3
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 93 IVRDPKATKQDLRKILEAQET-FYQQV---KQLSEAPVDLASKLQELEQEYGEPFLAAME 148
I+RD K +++ K+ + T +Q V +QL +A DL+ K EL +E+G + A +
Sbjct: 164 ILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFG--YNADTQ 221
Query: 149 KLL 151
KLL
Sbjct: 222 KLL 224
>gi|71040092 ADP-ribosylation factor interacting protein 1 isoform 2
[Homo sapiens]
Length = 341
Score = 30.0 bits (66), Expect = 3.3
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 93 IVRDPKATKQDLRKILEAQET-FYQQV---KQLSEAPVDLASKLQELEQEYGEPFLAAME 148
I+RD K +++ K+ + T +Q V +QL +A DL+ K EL +E+G + A +
Sbjct: 132 ILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFG--YNADTQ 189
Query: 149 KLL 151
KLL
Sbjct: 190 KLL 192
>gi|7657210 ADP-ribosylation factor interacting protein 1 isoform 2
[Homo sapiens]
Length = 341
Score = 30.0 bits (66), Expect = 3.3
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 93 IVRDPKATKQDLRKILEAQET-FYQQV---KQLSEAPVDLASKLQELEQEYGEPFLAAME 148
I+RD K +++ K+ + T +Q V +QL +A DL+ K EL +E+G + A +
Sbjct: 132 ILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFG--YNADTQ 189
Query: 149 KLL 151
KLL
Sbjct: 190 KLL 192
>gi|121582655 ankyrin repeat domain 35 [Homo sapiens]
Length = 1001
Score = 30.0 bits (66), Expect = 3.3
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 77 AQVLKALNHHFPESGPIVRDPKATKQDLRKILEAQETFYQQVKQLSEAPV-------DLA 129
A+ +L H G +V +A Q+L+ +LE T ++V +L EA DLA
Sbjct: 826 AREAASLRQHEKTRGSLVAQAQAWGQELKALLEKYNTACREVGRLREAVAEERRRSGDLA 885
Query: 130 SKLQELEQEYGE 141
++ E E++ E
Sbjct: 886 AQAAEQERQASE 897
>gi|7661864 USP6 N-terminal like isoform 1 [Homo sapiens]
Length = 828
Score = 29.6 bits (65), Expect = 4.3
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 213 EPMEQNPPQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEPLA-GRHFNLAPLGRRRVQSQ 271
+P+ Q PP+ Q +H HL G S P PLA GR + AP RR S
Sbjct: 368 KPLGQLPPELQSWGVH----------HLSNGQRSVGRPSPLASGRRESGAP-HRRHEHSP 416
Query: 272 WASTRGGHKER 282
+R G ER
Sbjct: 417 HPQSRTGTPER 427
>gi|122937432 USP6 N-terminal like isoform 2 [Homo sapiens]
Length = 845
Score = 29.6 bits (65), Expect = 4.3
Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
Query: 213 EPMEQNPPQQQRLALHNPLPKAKPGTHLPQGPSSRTHPEPLA-GRHFNLAPLGRRRVQSQ 271
+P+ Q PP+ Q +H HL G S P PLA GR + AP RR S
Sbjct: 385 KPLGQLPPELQSWGVH----------HLSNGQRSVGRPSPLASGRRESGAP-HRRHEHSP 433
Query: 272 WASTRGGHKER 282
+R G ER
Sbjct: 434 HPQSRTGTPER 444
>gi|42544161 forkhead box M1 isoform 3 [Homo sapiens]
Length = 748
Score = 29.6 bits (65), Expect = 4.3
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 297 TQVISKPESKEEHAIYTADLAMGTRAASTGKSK--------SPCQTLGGRALKENPVDLP 348
TQV++ P + H+I TA A G + S+G +K +P Q G R + D
Sbjct: 73 TQVVAIPNNANIHSIITALTAKGKESGSSGPNKFILISCGGAPTQPPGLRPQTQTSYDAK 132
Query: 349 ATE 351
TE
Sbjct: 133 RTE 135
>gi|42544165 forkhead box M1 isoform 2 [Homo sapiens]
Length = 763
Score = 29.6 bits (65), Expect = 4.3
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 297 TQVISKPESKEEHAIYTADLAMGTRAASTGKSK--------SPCQTLGGRALKENPVDLP 348
TQV++ P + H+I TA A G + S+G +K +P Q G R + D
Sbjct: 73 TQVVAIPNNANIHSIITALTAKGKESGSSGPNKFILISCGGAPTQPPGLRPQTQTSYDAK 132
Query: 349 ATE 351
TE
Sbjct: 133 RTE 135
>gi|42544167 forkhead box M1 isoform 1 [Homo sapiens]
Length = 801
Score = 29.6 bits (65), Expect = 4.3
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 8/63 (12%)
Query: 297 TQVISKPESKEEHAIYTADLAMGTRAASTGKSK--------SPCQTLGGRALKENPVDLP 348
TQV++ P + H+I TA A G + S+G +K +P Q G R + D
Sbjct: 73 TQVVAIPNNANIHSIITALTAKGKESGSSGPNKFILISCGGAPTQPPGLRPQTQTSYDAK 132
Query: 349 ATE 351
TE
Sbjct: 133 RTE 135
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,538,321
Number of Sequences: 37866
Number of extensions: 777154
Number of successful extensions: 3160
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 3116
Number of HSP's gapped (non-prelim): 83
length of query: 354
length of database: 18,247,518
effective HSP length: 103
effective length of query: 251
effective length of database: 14,347,320
effective search space: 3601177320
effective search space used: 3601177320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.