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Search of human proteins with 15011844
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15011844 selenophosphate synthetase 2 [Homo sapiens]
(448 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15011844 selenophosphate synthetase 2 [Homo sapiens] 888 0.0
gi|24797148 selenophosphate synthetase 1 [Homo sapiens] 583 e-166
gi|169167744 PREDICTED: similar to hCG1641913 [Homo sapiens] 263 2e-70
gi|239748517 PREDICTED: similar to hCG1641913 [Homo sapiens] 263 2e-70
gi|169167587 PREDICTED: similar to hCG1641913 [Homo sapiens] 261 1e-69
gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens] 37 0.028
gi|157364934 fibrosin [Homo sapiens] 33 0.40
gi|239747649 PREDICTED: similar to Putative uncharacterized prot... 33 0.52
gi|110611914 progesterone receptor [Homo sapiens] 32 1.2
gi|24497554 homeobox A13 [Homo sapiens] 32 1.5
gi|239747614 PREDICTED: similar to Putative uncharacterized prot... 32 1.5
gi|239745235 PREDICTED: hypothetical protein [Homo sapiens] 32 1.5
gi|24308514 glutathione S-transferase alpha 5 [Homo sapiens] 32 1.5
gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo s... 31 2.0
gi|50363230 RAB11 family interacting protein 1 isoform 2 [Homo s... 31 2.0
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 31 2.6
gi|239757289 PREDICTED: hypothetical protein [Homo sapiens] 31 2.6
gi|215276987 glutathione S-transferase alpha 2 [Homo sapiens] 30 4.4
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 30 4.4
gi|206597556 kelch domain containing 7B [Homo sapiens] 30 4.4
gi|116812620 hypothetical protein LOC147965 [Homo sapiens] 30 4.4
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 30 5.8
gi|33598929 scavenger receptor class F, member 1 isoform 1 precu... 29 7.6
gi|145309306 scavenger receptor class F, member 1 isoform 5 prec... 29 7.6
gi|25777746 piggyBac transposable element derived 4 [Homo sapiens] 29 7.6
gi|239747859 PREDICTED: hypothetical protein [Homo sapiens] 29 7.6
gi|239741741 PREDICTED: hypothetical protein XP_002342309 [Homo ... 29 7.6
gi|239755805 PREDICTED: hypothetical protein [Homo sapiens] 29 9.9
gi|239749502 PREDICTED: hypothetical protein [Homo sapiens] 29 9.9
gi|209529681 ring finger protein 185 isoform 1 [Homo sapiens] 29 9.9
>gi|15011844 selenophosphate synthetase 2 [Homo sapiens]
Length = 448
Score = 888 bits (2295), Expect = 0.0
Identities = 448/448 (100%), Positives = 448/448 (100%)
Query: 1 MAEASATGACGEAMAAAEGSSGPAGLTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGU 60
MAEASATGACGEAMAAAEGSSGPAGLTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKG
Sbjct: 1 MAEASATGACGEAMAAAEGSSGPAGLTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGU 60
Query: 61 GCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMD 120
GCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMD
Sbjct: 61 GCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMD 120
Query: 121 SCVIPLRHGGLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLMLLSVS 180
SCVIPLRHGGLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLMLLSVS
Sbjct: 121 SCVIPLRHGGLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLMLLSVS 180
Query: 181 QSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVATVVCQPNEFIMPD 240
QSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVATVVCQPNEFIMPD
Sbjct: 181 QSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVATVVCQPNEFIMPD 240
Query: 241 SAVVGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNMATLNR 300
SAVVGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNMATLNR
Sbjct: 241 SAVVGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNMATLNR 300
Query: 301 TAAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRF 360
TAAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRF
Sbjct: 301 TAAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKASGRF 360
Query: 361 GLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKP 420
GLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKP
Sbjct: 361 GLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARIIDKP 420
Query: 421 RVIEVLPRGATAAVLAPDSSNASSEPSS 448
RVIEVLPRGATAAVLAPDSSNASSEPSS
Sbjct: 421 RVIEVLPRGATAAVLAPDSSNASSEPSS 448
>gi|24797148 selenophosphate synthetase 1 [Homo sapiens]
Length = 392
Score = 583 bits (1503), Expect = e-166
Identities = 294/403 (72%), Positives = 331/403 (82%), Gaps = 21/403 (5%)
Query: 33 SNYRPFEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGG 92
S F P++ L S+RLT F+ +KG GCKVPQ+ L KLL L
Sbjct: 2 STRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESL---------------- 45
Query: 93 QEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVEDPYMMGR 152
QE QE GA P LGIGMD+CVIPLRHGGLSLVQTTD+ YP+V+DPYMMGR
Sbjct: 46 QENHFQEDEQFLGA----VMPRLGIGMDTCVIPLRHGGLSLVQTTDYIYPIVDDPYMMGR 101
Query: 153 IACANVLSDLYAMGITECDNMLMLLSVSQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTG 212
IACANVLSDLYAMG+TECDNMLMLL VS M++ ER+KV PL+++GF+DAAEE GT+VTG
Sbjct: 102 IACANVLSDLYAMGVTECDNMLMLLGVSNKMTDRERDKVMPLIIQGFKDAAEEAGTSVTG 161
Query: 213 GQTVVNPWIIIGGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPERW 272
GQTV+NPWI++GGVAT VCQPNEFIMPD+AV GDVLVLTKPLGTQVAV HQWLD PE+W
Sbjct: 162 GQTVLNPWIVLGGVATTVCQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKW 221
Query: 273 NKVKMVVSREEVELAYQEAMFNMATLNRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQ 332
NK+K+VV++E+VELAYQEAM NMA LNRTAAGLMHTFNAHAATDITGFGILGH+QNLAKQ
Sbjct: 222 NKIKLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGFGILGHAQNLAKQ 281
Query: 333 QRNEVSFVIHNLPIIAKMAAVSKASGR-FGLLQGTSAETSGGLLICLPREQAARFCSEIK 391
QRNEVSFVIHNLP++AKMAAVSKA G FGL+ GT ETSGGLLICLPREQAARFC+EIK
Sbjct: 282 QRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMHGTCPETSGGLLICLPREQAARFCAEIK 341
Query: 392 SSKYGEGHQAWIVGIVEKGNRTARIIDKPRVIEVLPRGATAAV 434
S KYGEGHQAWI+GIVEKGNRTARIIDKPR+IEV P+ AT V
Sbjct: 342 SPKYGEGHQAWIIGIVEKGNRTARIIDKPRIIEVAPQVATQNV 384
>gi|169167744 PREDICTED: similar to hCG1641913 [Homo sapiens]
Length = 506
Score = 263 bits (672), Expect = 2e-70
Identities = 138/193 (71%), Positives = 149/193 (77%), Gaps = 32/193 (16%)
Query: 236 FIMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNM 295
FIMPD+A +GDVLVLTKPLGTQVAVNAHQWL++ ERWN+VKMVV EEV+LAYQEAM NM
Sbjct: 257 FIMPDNAAIGDVLVLTKPLGTQVAVNAHQWLEDTERWNQVKMVVFGEEVDLAYQEAMLNM 316
Query: 296 ATLNRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSK 355
AT+NRTAAGLMH FNAH ATDITGFGILGHSQNL KQQRN+VSFVI NLP+IAKMAA+SK
Sbjct: 317 ATINRTAAGLMHKFNAHVATDITGFGILGHSQNLVKQQRNDVSFVICNLPVIAKMAAISK 376
Query: 356 ASGRFGLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTAR 415
A G +SSKY EGHQAWIVGIVEKGNRTA
Sbjct: 377 ARG--------------------------------QSSKYREGHQAWIVGIVEKGNRTAW 404
Query: 416 IIDKPRVIEVLPR 428
IIDKPRVIEVLPR
Sbjct: 405 IIDKPRVIEVLPR 417
Score = 91.3 bits (225), Expect = 2e-18
Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 77 TRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQT 136
TR V G G +EA+QEA LP G+ P+ PALGIG+DSC+I LRHGGLSLVQT
Sbjct: 183 TRRRVEGDFGSGK-DSWDEAAQEAPLP-GSTPANALPALGIGIDSCIISLRHGGLSLVQT 240
Query: 137 TDFFYPLVEDPYMMGRIACANVLSDLYAMG----ITECDNMLMLLSVSQSMSEEEREKVT 192
TD FYPLVEDPYM G A ++ D A+G +T+ + ++ Q + + ER
Sbjct: 241 TDVFYPLVEDPYMKG----AFIMPDNAAIGDVLVLTKPLGTQVAVNAHQWLEDTERWNQV 296
Query: 193 PLMVKG 198
++V G
Sbjct: 297 KMVVFG 302
>gi|239748517 PREDICTED: similar to hCG1641913 [Homo sapiens]
Length = 506
Score = 263 bits (672), Expect = 2e-70
Identities = 138/193 (71%), Positives = 149/193 (77%), Gaps = 32/193 (16%)
Query: 236 FIMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNM 295
FIMPD+A +GDVLVLTKPLGTQVAVNAHQWL++ ERWN+VKMVV EEV+LAYQEAM NM
Sbjct: 257 FIMPDNAAIGDVLVLTKPLGTQVAVNAHQWLEDTERWNQVKMVVFGEEVDLAYQEAMLNM 316
Query: 296 ATLNRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSK 355
AT+NRTAAGLMH FNAH ATDITGFGILGHSQNL KQQRN+VSFVI NLP+IAKMAA+SK
Sbjct: 317 ATINRTAAGLMHKFNAHVATDITGFGILGHSQNLVKQQRNDVSFVICNLPVIAKMAAISK 376
Query: 356 ASGRFGLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTAR 415
A G +SSKY EGHQAWIVGIVEKGNRTA
Sbjct: 377 ARG--------------------------------QSSKYREGHQAWIVGIVEKGNRTAW 404
Query: 416 IIDKPRVIEVLPR 428
IIDKPRVIEVLPR
Sbjct: 405 IIDKPRVIEVLPR 417
Score = 91.3 bits (225), Expect = 2e-18
Identities = 58/126 (46%), Positives = 76/126 (60%), Gaps = 10/126 (7%)
Query: 77 TRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQT 136
TR V G G +EA+QEA LP G+ P+ PALGIG+DSC+I LRHGGLSLVQT
Sbjct: 183 TRRRVEGDFGSGK-DSWDEAAQEAPLP-GSTPANALPALGIGIDSCIISLRHGGLSLVQT 240
Query: 137 TDFFYPLVEDPYMMGRIACANVLSDLYAMG----ITECDNMLMLLSVSQSMSEEEREKVT 192
TD FYPLVEDPYM G A ++ D A+G +T+ + ++ Q + + ER
Sbjct: 241 TDVFYPLVEDPYMKG----AFIMPDNAAIGDVLVLTKPLGTQVAVNAHQWLEDTERWNQV 296
Query: 193 PLMVKG 198
++V G
Sbjct: 297 KMVVFG 302
>gi|169167587 PREDICTED: similar to hCG1641913 [Homo sapiens]
Length = 506
Score = 261 bits (666), Expect = 1e-69
Identities = 137/192 (71%), Positives = 148/192 (77%), Gaps = 32/192 (16%)
Query: 237 IMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPERWNKVKMVVSREEVELAYQEAMFNMA 296
IMPD+A +GDVLVLTKPLGTQVAVNAHQWL++ ERWN+VKMVV EEV+LAYQEAM NMA
Sbjct: 258 IMPDNAAIGDVLVLTKPLGTQVAVNAHQWLEDTERWNQVKMVVFGEEVDLAYQEAMLNMA 317
Query: 297 TLNRTAAGLMHTFNAHAATDITGFGILGHSQNLAKQQRNEVSFVIHNLPIIAKMAAVSKA 356
T+NRTAAGLMH FNAH ATDITGFGILGHSQNL KQQRN+VSFVI NLP+IAKMAA+SKA
Sbjct: 318 TINRTAAGLMHKFNAHVATDITGFGILGHSQNLVKQQRNDVSFVICNLPVIAKMAAISKA 377
Query: 357 SGRFGLLQGTSAETSGGLLICLPREQAARFCSEIKSSKYGEGHQAWIVGIVEKGNRTARI 416
G +SSKY EGHQAWIVGIVEKGNRTA I
Sbjct: 378 RG--------------------------------QSSKYREGHQAWIVGIVEKGNRTAWI 405
Query: 417 IDKPRVIEVLPR 428
IDKPRVIEVLPR
Sbjct: 406 IDKPRVIEVLPR 417
Score = 94.0 bits (232), Expect = 3e-19
Identities = 59/126 (46%), Positives = 77/126 (61%), Gaps = 10/126 (7%)
Query: 77 TRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIPLRHGGLSLVQT 136
TR V G G +EA+QEA LP G+ P+ PALGIG+DSC+I LRHGGLSLVQT
Sbjct: 183 TRRRVEGDFGSGK-DSWDEAAQEAPLP-GSTPANALPALGIGIDSCIISLRHGGLSLVQT 240
Query: 137 TDFFYPLVEDPYMMGRIACANVLSDLYAMG----ITECDNMLMLLSVSQSMSEEEREKVT 192
TDFFYPLVEDPYM G A ++ D A+G +T+ + ++ Q + + ER
Sbjct: 241 TDFFYPLVEDPYMKG----ALIMPDNAAIGDVLVLTKPLGTQVAVNAHQWLEDTERWNQV 296
Query: 193 PLMVKG 198
++V G
Sbjct: 297 KMVVFG 302
>gi|170014689 VPS10 domain receptor protein SORCS 2 [Homo sapiens]
Length = 1159
Score = 37.4 bits (85), Expect = 0.028
Identities = 34/104 (32%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Query: 17 AEGSSGPAGLTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGL 76
+ S GP R+ S P P++ P L G G + P+ L A L
Sbjct: 7 SRASKGPG--PTARAPSPGAPPPPRSPRSRPLLLLLLLLGACGAAGRSPEPGRLGPHAQL 64
Query: 77 TRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMD 120
TR PP GR GG E+ P GPSP PA G G D
Sbjct: 65 TRVPRSPPAGRAEPGGGEDRQARGTEPGAPGPSPG-PAPGPGED 107
>gi|157364934 fibrosin [Homo sapiens]
Length = 460
Score = 33.5 bits (75), Expect = 0.40
Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 2 AEASATGACGEAMAAAEGSSGPAGLTLGRSFSNYRPFEPQALGLSPSWRLTGF 54
A A+A A A AAA ++GP GL L F RP P LG SP R GF
Sbjct: 311 AAAAAAAAAAAAAAAAAAATGPQGLHL--LFERPRP--PPFLGPSPPDRCAGF 359
>gi|239747649 PREDICTED: similar to Putative uncharacterized protein
FLJ44672 [Homo sapiens]
Length = 237
Score = 33.1 bits (74), Expect = 0.52
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 11/70 (15%)
Query: 49 WRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGP 108
W L +G++ G P LL AG +RP V GL G EE Q+ GLP GP
Sbjct: 99 WHLQAPNGLRSVGSSRPSLGLLAASAGPSRPQV------GLEVGLEE--QQVGLP---GP 147
Query: 109 SPTFPALGIG 118
S A G
Sbjct: 148 SSVLSAASPG 157
>gi|110611914 progesterone receptor [Homo sapiens]
Length = 933
Score = 32.0 bits (71), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Query: 177 LSVSQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVATVVCQPNEF 236
+ V + E E PL+ KG A GG A GG V P GGVA V + + F
Sbjct: 219 VEVEEEDGSESEESAGPLL-KGKPRAL--GGAAAGGGAAAVPPGAAAGGVALVPKEDSRF 275
Query: 237 IMPDSAVV 244
P A+V
Sbjct: 276 SAPRVALV 283
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 31.6 bits (70), Expect = 1.5
Identities = 17/36 (47%), Positives = 18/36 (50%)
Query: 2 AEASATGACGEAMAAAEGSSGPAGLTLGRSFSNYRP 37
A A A C AAA+ SSGPA L G S Y P
Sbjct: 145 AGAEAAKQCSPCSAAAQSSSGPAALPYGYFGSGYYP 180
>gi|239747614 PREDICTED: similar to Putative uncharacterized protein
FLJ44672 [Homo sapiens]
Length = 259
Score = 31.6 bits (70), Expect = 1.5
Identities = 29/85 (34%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 49 WRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDV---RPPLGR------------GLVGGQ 93
W L +G++ G P LL AG RP+V RP LG GL G
Sbjct: 100 WHLQAPNGLRSVGSSRPSLGLLAASAGPNRPEVGLSRPSLGLPAASAGPSHPQIGLELGL 159
Query: 94 EEASQEAGLPAGAGPSPTFPALGIG 118
EE Q+ GLP GP+ A G
Sbjct: 160 EE--QQVGLP---GPNSVLSAASPG 179
>gi|239745235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 664
Score = 31.6 bits (70), Expect = 1.5
Identities = 37/168 (22%), Positives = 60/168 (35%), Gaps = 12/168 (7%)
Query: 63 KVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSC 122
+ P+ + +AGL V P LV G E + A GPSP+ P + G D
Sbjct: 135 RTPESQPVSSVAGLVSGSVAGPAEEMLVPGSPEIAAPLPPSASLGPSPSSPRVPGGAD-- 192
Query: 123 VIPLRHGGLSLVQTTDFFYPLVED---PYMMGRIACANVLSDLYAMGITECDNMLMLLSV 179
P++ L T F V P M R + ++ ++ + +
Sbjct: 193 --PIQSSALPYRSQTFSFQDSVSSTPGPSHMTRSVTFTITNEAFSAALLNPASW-----K 245
Query: 180 SQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVA 227
Q + + ++ PL + F G G VN ++ GG A
Sbjct: 246 HQLLRKIIHHQLQPLYHEAFPGFQGIGVLVFRPGSVAVNASLVFGGRA 293
>gi|24308514 glutathione S-transferase alpha 5 [Homo sapiens]
Length = 222
Score = 31.6 bits (70), Expect = 1.5
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 130 GLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLMLLSVSQSMSEEERE 189
G+ LVQT + + G+ L D+Y GI + M++LL + Q EER+
Sbjct: 62 GMKLVQTRAILNYIASKYNLYGKDMKERALIDMYTEGIVDLTEMILLLLICQ---PEERD 118
Query: 190 KVTPLM 195
T L+
Sbjct: 119 AKTALV 124
>gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo
sapiens]
Length = 1283
Score = 31.2 bits (69), Expect = 2.0
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 11 GEAMAAAEGSSGPAG----LTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGUGCKVPQ 66
G + E GP+G L LG ++R PQA +PS + T F K K
Sbjct: 1002 GLVVPCPERGKGPSGEADRLVLGEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGK--S 1059
Query: 67 EALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP 113
+L K L G + + P+G G S + +P+ PS FP
Sbjct: 1060 SSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSLDNPVPS-PSPSEIFP 1105
>gi|50363230 RAB11 family interacting protein 1 isoform 2 [Homo
sapiens]
Length = 612
Score = 31.2 bits (69), Expect = 2.0
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Query: 11 GEAMAAAEGSSGPAG----LTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGUGCKVPQ 66
G + E GP+G L LG ++R PQA +PS + T F K K
Sbjct: 331 GLVVPCPERGKGPSGEADRLVLGEGLCDFRLQAPQASVTAPSEQTTEFGIHKPHLGK--S 388
Query: 67 EALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP 113
+L K L G + + P+G G S + +P+ PS FP
Sbjct: 389 SSLDKQLPGPSGGEEEKPMGNGSPSPPPGTSLDNPVPS-PSPSEIFP 434
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 30.8 bits (68), Expect = 2.6
Identities = 36/122 (29%), Positives = 42/122 (34%), Gaps = 16/122 (13%)
Query: 1 MAEASATGACGEAMAAAEGSSGPAGLT--------LGRSFSNYRPFEPQALGLSPSWRLT 52
M A GA G + A G GPAG G N EP G +
Sbjct: 398 MGPAGIPGAPG--LMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIP 455
Query: 53 GFSGMKGUGCK--VPQEALLKLLAGLT----RPDVRPPLGRGLVGGQEEASQEAGLPAGA 106
G G KG K P E L G P R P G + G++ + E G P A
Sbjct: 456 GVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPA 515
Query: 107 GP 108
GP
Sbjct: 516 GP 517
>gi|239757289 PREDICTED: hypothetical protein [Homo sapiens]
Length = 545
Score = 30.8 bits (68), Expect = 2.6
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 15/91 (16%)
Query: 46 SPSWRLTGFSGMKGUGCKVPQEALLKLLAGLTRPDVRPPLGRG-LVGGQEEASQEAGLPA 104
S W+L G G++ G + P GL +V P G GQ Q + P
Sbjct: 187 SNGWQLHGLGGLRDGGARSPM--------GLEGGEVEDPEITGDASSGQSSPVQVSQQPL 238
Query: 105 GAGPSPTFPALGIGMDSCVIPLRHGGLSLVQ 135
G +P P GIG + HG VQ
Sbjct: 239 GQAQAPKHPQGGIG------SIHHGVAQAVQ 263
>gi|215276987 glutathione S-transferase alpha 2 [Homo sapiens]
Length = 222
Score = 30.0 bits (66), Expect = 4.4
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 130 GLSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLMLLSVSQSMSEEERE 189
G+ LVQT + + G+ L D+Y GI + M++LL SQ EE+
Sbjct: 62 GMKLVQTRAILNYIASKYNLYGKDIKEKALIDMYIEGIADLGEMILLLPFSQ--PEEQDA 119
Query: 190 KVTPLMVK 197
K+ + K
Sbjct: 120 KLALIQEK 127
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 30.0 bits (66), Expect = 4.4
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 4 ASATGACGEAMAAAEGSSGPAGLTLG--RSFSNYRPFEPQALGLSPS 48
+SA+ A A AAA +S PAGL G R S P P L SPS
Sbjct: 134 SSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPS 180
>gi|206597556 kelch domain containing 7B [Homo sapiens]
Length = 594
Score = 30.0 bits (66), Expect = 4.4
Identities = 29/97 (29%), Positives = 40/97 (41%), Gaps = 10/97 (10%)
Query: 66 QEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFPALGIGMDSCVIP 125
QE KL+ L RP G G+V G + S A PA A LG +D
Sbjct: 176 QEEARKLMVFLQRPG-----GWGVVEGPRKPSSRALEPATAAALRRRLDLGSCLDVLAFA 230
Query: 126 LRHGGLSLVQTT-----DFFYPLVEDPYMMGRIACAN 157
+HG L Q T D ++ DP + R++ A+
Sbjct: 231 QQHGEPGLAQETYALMSDNLLRVLGDPCLYRRLSAAD 267
>gi|116812620 hypothetical protein LOC147965 [Homo sapiens]
Length = 349
Score = 30.0 bits (66), Expect = 4.4
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 62 CKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQ------EEASQEAGLPAGAGPSPTFPA 114
C Q L L L P RPPLG G+V G + Q GLP P+P PA
Sbjct: 120 CSELQATRLLCLRSLLDPSPRPPLGEGVVEGAGMVQELDLTLQALGLPR---PAPGTPA 175
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 29.6 bits (65), Expect = 5.8
Identities = 32/110 (29%), Positives = 37/110 (33%), Gaps = 15/110 (13%)
Query: 18 EGSSGPAGLTLGRSFSNYR-PFEPQALGLSPSWRLTGFSGMKGUGCKVPQEALLKLLAGL 76
+G+ P G L F Y P EPQ LGL G G P
Sbjct: 947 KGAGPPGGAGLADGFHRYYGPIEPQGLGLGLGEARAAPRGAAGRPLSPP---------AA 997
Query: 77 TRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP----ALGIGMDSC 122
P PP +V +E A AG G PSP P A +G C
Sbjct: 998 QPPQKPPPSYFAIVRDKEPAEPPAGAFPGF-PSPPAPPAAAATAVGPPLC 1046
>gi|33598929 scavenger receptor class F, member 1 isoform 1
precursor [Homo sapiens]
Length = 830
Score = 29.3 bits (64), Expect = 7.6
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 76 LTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP-----ALGIGMDS 121
L R P L G VG ++ +AGLP GP P LG G +S
Sbjct: 736 LNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTES 786
>gi|145309306 scavenger receptor class F, member 1 isoform 5
precursor [Homo sapiens]
Length = 744
Score = 29.3 bits (64), Expect = 7.6
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)
Query: 76 LTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPTFP-----ALGIGMDS 121
L R P L G VG ++ +AGLP GP P LG G +S
Sbjct: 650 LNRKKGSPGLASGSVGQSPNSAPKAGLPGATGPMAVRPEEAVRGLGAGTES 700
>gi|25777746 piggyBac transposable element derived 4 [Homo sapiens]
Length = 585
Score = 29.3 bits (64), Expect = 7.6
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 384 ARFCSEIKSSKYGEGHQAWIVG------IVEKGNRTARIIDKPRVI 423
ARFC E+ + K+ +G + ++ ++E NR + +PRVI
Sbjct: 376 ARFCGELMALKWCDGKEVTMLSTFHNDTVIEVNNRNGKKTKRPRVI 421
>gi|239747859 PREDICTED: hypothetical protein [Homo sapiens]
Length = 595
Score = 29.3 bits (64), Expect = 7.6
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 18/66 (27%)
Query: 66 QEALLKLLAGLTRPDVRPPLGRG----------LVGGQEEASQEAGLP--------AGAG 107
QE +LL+ + P PPL RG L G ++ AGLP A
Sbjct: 347 QEEEPELLSAVHSPGTAPPLSRGCPSTFQLWTLLAGPEQGLGNSAGLPAWHLESQEAKGD 406
Query: 108 PSPTFP 113
P P+FP
Sbjct: 407 PEPSFP 412
>gi|239741741 PREDICTED: hypothetical protein XP_002342309 [Homo
sapiens]
Length = 404
Score = 29.3 bits (64), Expect = 7.6
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 18/66 (27%)
Query: 66 QEALLKLLAGLTRPDVRPPLGRG----------LVGGQEEASQEAGLP--------AGAG 107
QE +LL+ + P PPL RG L G ++ AGLP A
Sbjct: 156 QEEEPELLSAVHSPGTAPPLSRGCPSTFQLWTLLAGPEQGLGNSAGLPAWHLESQEAKGD 215
Query: 108 PSPTFP 113
P P+FP
Sbjct: 216 PEPSFP 221
>gi|239755805 PREDICTED: hypothetical protein [Homo sapiens]
Length = 435
Score = 28.9 bits (63), Expect = 9.9
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 66 QEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSP 110
+E + LAG RP PPL G VG + E S AG P P
Sbjct: 258 EERKMSGLAGSQRPLTYPPLSPGHVGERTEVSTGRREQAGRLPRP 302
>gi|239749502 PREDICTED: hypothetical protein [Homo sapiens]
Length = 105
Score = 28.9 bits (63), Expect = 9.9
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 46 SPSWRLTGFS---GMKGUGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEAGL 102
SPS +L+G + + GC+VPQ G R G+ + GGQ A ++ L
Sbjct: 19 SPSPQLSGAAQRGAVAYQGCRVPQGR------GAQRS------GKDVAGGQGCACRKTPL 66
Query: 103 PAGAGPSPTFPALGIGMDSCVIP 125
GA + TF G +IP
Sbjct: 67 TTGAAFTATFRQAGTNSQRAIIP 89
>gi|209529681 ring finger protein 185 isoform 1 [Homo sapiens]
Length = 192
Score = 28.9 bits (63), Expect = 9.9
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
Query: 74 AGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGAGPSPT----FPALGIG 118
AG++R V P GRG G Q+ + P G P P F G G
Sbjct: 81 AGISRDKVIPLYGRGSTGQQDPREKTPPRPQGQRPEPENRGGFQGFGFG 129
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,009,054
Number of Sequences: 37866
Number of extensions: 781436
Number of successful extensions: 2278
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 2247
Number of HSP's gapped (non-prelim): 46
length of query: 448
length of database: 18,247,518
effective HSP length: 106
effective length of query: 342
effective length of database: 14,233,722
effective search space: 4867932924
effective search space used: 4867932924
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.