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Search of human proteins with 148728182
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148728182 JAW1-related protein isoform b [Homo sapiens]
(821 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154091332 JAW1-related protein isoform b [Homo sapiens] 1631 0.0
gi|148728182 JAW1-related protein isoform b [Homo sapiens] 1631 0.0
gi|148747864 JAW1-related protein isoform a [Homo sapiens] 1630 0.0
gi|154091334 JAW1-related protein isoform c [Homo sapiens] 1183 0.0
gi|42789729 lymphoid-restricted membrane protein [Homo sapiens] 133 6e-31
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 61 4e-09
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 60 1e-08
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 54 4e-07
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 54 4e-07
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 54 4e-07
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 54 4e-07
gi|19924097 synapsin I isoform Ib [Homo sapiens] 54 4e-07
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 54 4e-07
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 54 8e-07
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 54 8e-07
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 53 1e-06
gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein ... 52 2e-06
gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein ... 52 2e-06
gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein ... 52 2e-06
gi|44662807 hypothetical protein LOC388407 [Homo sapiens] 52 3e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 51 4e-06
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 51 4e-06
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 51 5e-06
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 51 5e-06
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 50 6e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 50 6e-06
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 50 1e-05
gi|119943102 CREB binding protein isoform b [Homo sapiens] 50 1e-05
gi|119943104 CREB binding protein isoform a [Homo sapiens] 50 1e-05
gi|237757312 synaptojanin 1 isoform c [Homo sapiens] 49 1e-05
>gi|154091332 JAW1-related protein isoform b [Homo sapiens]
Length = 821
Score = 1631 bits (4223), Expect = 0.0
Identities = 821/821 (100%), Positives = 821/821 (100%)
Query: 1 MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 60
MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS
Sbjct: 1 MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 60
Query: 61 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 120
ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL
Sbjct: 61 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 120
Query: 121 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 180
TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR
Sbjct: 121 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 180
Query: 181 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 240
LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG
Sbjct: 181 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 240
Query: 241 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 300
KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR
Sbjct: 241 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 300
Query: 301 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 360
GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL
Sbjct: 301 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 360
Query: 361 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 420
TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL
Sbjct: 361 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 420
Query: 421 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 480
LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK
Sbjct: 421 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 480
Query: 481 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 540
ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK
Sbjct: 481 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 540
Query: 541 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 600
ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM
Sbjct: 541 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 600
Query: 601 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 660
PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN
Sbjct: 601 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 660
Query: 661 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 720
GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE
Sbjct: 661 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 720
Query: 721 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 780
SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL
Sbjct: 721 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 780
Query: 781 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 821
YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ
Sbjct: 781 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 821
>gi|148728182 JAW1-related protein isoform b [Homo sapiens]
Length = 821
Score = 1631 bits (4223), Expect = 0.0
Identities = 821/821 (100%), Positives = 821/821 (100%)
Query: 1 MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 60
MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS
Sbjct: 1 MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 60
Query: 61 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 120
ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL
Sbjct: 61 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 120
Query: 121 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 180
TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR
Sbjct: 121 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 180
Query: 181 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 240
LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG
Sbjct: 181 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 240
Query: 241 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 300
KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR
Sbjct: 241 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 300
Query: 301 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 360
GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL
Sbjct: 301 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 360
Query: 361 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 420
TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL
Sbjct: 361 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 420
Query: 421 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 480
LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK
Sbjct: 421 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 480
Query: 481 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 540
ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK
Sbjct: 481 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 540
Query: 541 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 600
ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM
Sbjct: 541 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 600
Query: 601 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 660
PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN
Sbjct: 601 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 660
Query: 661 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 720
GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE
Sbjct: 661 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 720
Query: 721 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 780
SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL
Sbjct: 721 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 780
Query: 781 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 821
YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ
Sbjct: 781 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 821
>gi|148747864 JAW1-related protein isoform a [Homo sapiens]
Length = 903
Score = 1630 bits (4220), Expect = 0.0
Identities = 820/821 (99%), Positives = 821/821 (100%)
Query: 1 MTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 60
+TGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS
Sbjct: 83 LTGDATSPEGETDKNLANRVHSPHKRLSHRHLKVSTASLTSVDPAGHIIDLVNDQLPDIS 142
Query: 61 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 120
ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL
Sbjct: 143 ISEEDKKKNLALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSL 202
Query: 121 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 180
TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR
Sbjct: 203 TVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGR 262
Query: 181 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 240
LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG
Sbjct: 263 LAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG 322
Query: 241 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 300
KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR
Sbjct: 323 KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLR 382
Query: 301 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 360
GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL
Sbjct: 383 GLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPGLKDFQIQVQPVRMQKL 442
Query: 361 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 420
TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL
Sbjct: 443 TKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEEESKSGLDVMPNISDVL 502
Query: 421 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 480
LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK
Sbjct: 503 LRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRINQAERERNLTEENTEK 562
Query: 481 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 540
ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK
Sbjct: 563 ELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVGAVRQEKRMSK 622
Query: 541 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 600
ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM
Sbjct: 623 ATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNM 682
Query: 601 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 660
PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN
Sbjct: 683 PRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTN 742
Query: 661 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 720
GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE
Sbjct: 743 GDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSE 802
Query: 721 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 780
SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL
Sbjct: 803 SPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVIWMMAAVMLVLTVVLGL 862
Query: 781 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 821
YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ
Sbjct: 863 YNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 903
>gi|154091334 JAW1-related protein isoform c [Homo sapiens]
Length = 597
Score = 1183 bits (3061), Expect = 0.0
Identities = 597/597 (100%), Positives = 597/597 (100%)
Query: 225 MALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAG 284
MALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAG
Sbjct: 1 MALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAG 60
Query: 285 SKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPG 344
SKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPG
Sbjct: 61 SKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAPG 120
Query: 345 LKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEE 404
LKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEE
Sbjct: 121 LKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAIEEE 180
Query: 405 ESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRI 464
ESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRI
Sbjct: 181 ESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLESRI 240
Query: 465 NQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSS 524
NQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSS
Sbjct: 241 NQAERERNLTEENTEKELENFKASITSSASLWHHCEHRETYQKLLEDIAVLHRLAARLSS 300
Query: 525 RAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDG 584
RAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDG
Sbjct: 301 RAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDG 360
Query: 585 VPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSL 644
VPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSL
Sbjct: 361 VPRTARSMSLTLGKNMPRRRVSVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSL 420
Query: 645 PVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKT 704
PVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKT
Sbjct: 421 PVTSALPALLENGKTNGDPDCEASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKT 480
Query: 705 KELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVI 764
KELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVI
Sbjct: 481 KELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHFLQVMYPKLCQHWQVI 540
Query: 765 WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 821
WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ
Sbjct: 541 WMMAAVMLVLTVVLGLYNSYNSCAEQADGPLGRSTCSAAQRDSWWSSGLQHEQPTEQ 597
>gi|42789729 lymphoid-restricted membrane protein [Homo sapiens]
Length = 499
Score = 133 bits (335), Expect = 6e-31
Identities = 89/215 (41%), Positives = 128/215 (59%), Gaps = 12/215 (5%)
Query: 403 EEESKSGLDVMPNISDVLLRKLRVHRSLPGSAPPLTEKEVENVFVQLSLAFRNDSYTLES 462
++E SG V+ + ++ + + +S SA EKEVE F++LSL F+ D +TLE
Sbjct: 118 KKEHASGDSVVSPLPVTTVKSVNLRQSENTSA---NEKEVEAEFLRLSLGFKCDWFTLEK 174
Query: 463 RINQAERERNLTEENTEKELENFKASITSSASLWHHCEH----RETYQKLLEDIAVLHRL 518
R+ ER R+L EEN +KE+ N + S L CE +E +KL + I L +
Sbjct: 175 RVKLEERSRDLAEENLKKEITNCLKLLESLTPL---CEDDNQAQEIIKKLEKSIKFLSQC 231
Query: 519 AARLSSRAEVVGAVRQEKRMSKATEVMMQYVENLKRTYEKDHAELMEFKKLANQNSSRSC 578
AAR++SRAE++GA+ QE R+SKA EVM+Q+VENLKR Y K+HAEL E K++ QN RS
Sbjct: 232 AARVASRAEMLGAINQESRVSKAVEVMIQHVENLKRMYAKEHAELEELKQVLLQN-ERSF 290
Query: 579 GPSEDGVPRTARSMSLTL-GKNMPRRRVSVAVVPK 612
P ED + S +L K RRV++A +P+
Sbjct: 291 NPLEDDDDCQIKKRSASLNSKPSSLRRVTIASLPR 325
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 61.2 bits (147), Expect = 4e-09
Identities = 54/191 (28%), Positives = 73/191 (38%), Gaps = 29/191 (15%)
Query: 123 PTPPGLDVCSGPPSPL---PGAPPQKGDEADVSSPHPGEPNVP--------KGLADRKQN 171
P P G + GPP P G PPQ G+++ PHPG+P P +G
Sbjct: 60 PPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGK 119
Query: 172 DQRKVSQG---RLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALN 228
+R QG P PPP + + ++ P +P P+G P + + A +
Sbjct: 120 PERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHP-GKPEGPPPQEGNKSRSARS 178
Query: 229 SP--QPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSK 286
P GP + E K +G P P P G P PAG+P GP
Sbjct: 179 PPGKPQGPPQQEGNKP------QGPPPPGKPQGPPPAGGNPQQPQAPPAGKPQGPPP--- 229
Query: 287 AELPPTVSRPP 297
PP RPP
Sbjct: 230 ---PPQGGRPP 237
Score = 44.7 bits (104), Expect = 4e-04
Identities = 45/171 (26%), Positives = 59/171 (34%), Gaps = 28/171 (16%)
Query: 134 PPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKE 193
PP G PPQ G+++ P PG+P + R G + PPP E
Sbjct: 53 PPGKPQGPPPQGGNQSQGPPPPPGKP------------EGRPPQGGNQSQGPPPHPGKPE 100
Query: 194 IAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPL 253
Q N P P G G + P P P GK G+
Sbjct: 101 RPPPQGGNQSQGTPP---PPGKPERPPPQGGNQSHRPPPPP-----GKPERPPPQGGNQS 152
Query: 254 PRSPTQDAAGVGPPASQG------RGPAGEPMGP--EAGSKAELPPTVSRP 296
P GPP +G R P G+P GP + G+K + PP +P
Sbjct: 153 QGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKP 203
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 59.7 bits (143), Expect = 1e-08
Identities = 65/234 (27%), Positives = 84/234 (35%), Gaps = 23/234 (9%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGAPPQKGDEADVS 152
P P P S SP S P P G + GPP P P PP +G
Sbjct: 94 PPGKPQGPPPQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 152
Query: 153 SPHPGEPNVPKGLADRKQNDQRKVS--------QGRLAPR-PPPVEKSKEIAIEQKENFD 203
P PG+P P D K R QG P+ PPP + Q N
Sbjct: 153 PPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKP 212
Query: 204 PLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLPRSPTQDAA 262
P P+G P ++ + A + P +P + G Q +G P P Q
Sbjct: 213 QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQP-----QGPPPPPGKPQGPP 267
Query: 263 GVGPPASQGRGPAGEPMG--PEAGSK---AELPPTVSRPPLLRGLSWDSGPEEP 311
G QG P G+P G P+ GSK + PP + P +G + GP P
Sbjct: 268 PQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPP 321
Score = 57.4 bits (137), Expect = 5e-08
Identities = 71/275 (25%), Positives = 97/275 (35%), Gaps = 33/275 (12%)
Query: 96 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGL---------DVCSGPPSP--LPGAPPQ 144
G+ P P P P + S + +PPG + GPP P P PP
Sbjct: 147 GNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 206
Query: 145 KGDEADVSSPHPGEPNVPKGLADRKQNDQRKVS--------QGRLAPR-PPPVEKSKEIA 195
+G P PG+P P D K R QG P+ PPP +
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 266
Query: 196 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 254
Q N P P+G P S + + + P +P + G Q +G P P
Sbjct: 267 PPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQP-----QGPPPP 321
Query: 255 RSPTQDAAGVGPPASQGRGPAGEPMG--PEAGSK---AELPPTVSR-PPLLRGLSWDSGP 308
Q G QG P G+P G P+ GSK A PP + PP G + P
Sbjct: 322 PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPP 381
Query: 309 EEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAP 343
G Q+ A P + + GG+ ++ P
Sbjct: 382 PPAGGNPQQPQAP-PAGQPQGPPRPPQGGRPSRPP 415
Score = 52.8 bits (125), Expect = 1e-06
Identities = 59/229 (25%), Positives = 86/229 (37%), Gaps = 38/229 (16%)
Query: 98 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPL---PGAPPQKGDEADVSSP 154
S ++ ++S SP+ N P P G + GPPSP G PPQ G++ P
Sbjct: 15 SAQNLNEDVSQEESPSLIAGNPQGAP-PQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPP 73
Query: 155 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 214
PG+P P QG P+ PP + Q + + P P+G
Sbjct: 74 PPGKPQGPP-------------PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQG 120
Query: 215 LAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPP------A 268
P G P P P + + +G P+ P GPP +
Sbjct: 121 PPP----QGGNQPQGPPPPPGKPQGPPP------QGGNKPQGPPPPGKPQGPPPQGDNKS 170
Query: 269 SQGRGPAGEPMG--PEAGSKAE-LPPTVSRP--PLLRGLSWDSGPEEPG 312
R P G+P G P+ G++ + PP +P P +G + GP PG
Sbjct: 171 RSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 219
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 54.3 bits (129), Expect = 4e-07
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 98 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP--PQKGDEADVSSPH 155
+P A +PN +PT+ + + T P P P +P AP P+ + P
Sbjct: 534 TPKAAAPNTPKEPAPTTPKEPAPTTPKEP------APTTPKETAPTTPKGTAPTTLKEPA 587
Query: 156 PGEPN--VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 213
P P PK LA + + + AP P + + ++ P + TTPK
Sbjct: 588 PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP--KGTAPTTPKEPAPTTPKEPAPTTPK 645
Query: 214 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG-------SPLPRSPTQDAAGV-- 264
G AP T L P P + K+L T +G P P +P + A
Sbjct: 646 GTAPTT-------LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 698
Query: 265 --GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE---EPGPRLQKVL 319
P + P P S+ P T P + +S PE EP P+ +
Sbjct: 699 EPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENS 758
Query: 320 AKLP 323
K P
Sbjct: 759 PKEP 762
Score = 47.4 bits (111), Expect = 5e-05
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 85 TRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT-----VPTPPGLDVCSGPPSPLP 139
T+ + P + + +P SPT+++ + T PT P + P P P
Sbjct: 393 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 452
Query: 140 GAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 195
P P + ++P P PK A + +LAP P EK
Sbjct: 453 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP--EKPAPTT 510
Query: 196 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 254
E+ P + TTP+ AP T + A N+P +P P K+ T P P
Sbjct: 511 PEELAPTTPEEPTPTTPEEPAPTTPKAA--APNTPKEPAPTTP---KEPAPT-TPKEPAP 564
Query: 255 RSPTQDAAGVGPPASQGRGPA----GEPMGPEAGSKAELPPTVSRPP 297
+P + A P +G P P P+ + EL PT ++ P
Sbjct: 565 TTPKETA----PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 607
Score = 43.9 bits (102), Expect = 6e-04
Identities = 52/228 (22%), Positives = 75/228 (32%), Gaps = 32/228 (14%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP 154
P + + +P +PT+ + + T P P P P P E ++P
Sbjct: 286 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 345
Query: 155 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 214
P PK A P+ P KE A + P TTPK
Sbjct: 346 KEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPSP-----TTPKE 387
Query: 215 LAPVTNSSGKMALNSPQPGPVES--ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR 272
AP T S P P +S K+ T + P P +P + A P + +
Sbjct: 388 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK-EPAPTTPKEPA-----PTTPKK 441
Query: 273 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLA 320
P P + E PT ++ P + P+EP P K A
Sbjct: 442 PAPTTPKEPAPTTPKEPAPTTTKKPA------PTTPKEPAPTTPKETA 483
Score = 40.4 bits (93), Expect = 0.007
Identities = 52/221 (23%), Positives = 70/221 (31%), Gaps = 22/221 (9%)
Query: 99 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 158
P++ +P +PT+ +S T P S P +P AP P P
Sbjct: 224 PASTTPK---EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP------TTTKEPAPTT 274
Query: 159 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKE--NFDPLQYPETTPKGLA 216
P P ++ S P P K KE P + TTPK A
Sbjct: 275 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 334
Query: 217 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAG 276
P T P P + K T E P P +P + A P ++ P
Sbjct: 335 PTTKEPAPTTPKEPAPTAPK----KPAPTTPKE--PAPTTPKEPA----PTTTKEPSPT- 383
Query: 277 EPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQK 317
P P + P T P S + P+EP P K
Sbjct: 384 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 424
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 54.3 bits (129), Expect = 4e-07
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 98 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP--PQKGDEADVSSPH 155
+P A +PN +PT+ + + T P P P +P AP P+ + P
Sbjct: 575 TPKAAAPNTPKEPAPTTPKEPAPTTPKEP------APTTPKETAPTTPKGTAPTTLKEPA 628
Query: 156 PGEPN--VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 213
P P PK LA + + + AP P + + ++ P + TTPK
Sbjct: 629 PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP--KGTAPTTPKEPAPTTPKEPAPTTPK 686
Query: 214 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG-------SPLPRSPTQDAAGV-- 264
G AP T L P P + K+L T +G P P +P + A
Sbjct: 687 GTAPTT-------LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 739
Query: 265 --GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE---EPGPRLQKVL 319
P + P P S+ P T P + +S PE EP P+ +
Sbjct: 740 EPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENS 799
Query: 320 AKLP 323
K P
Sbjct: 800 PKEP 803
Score = 47.4 bits (111), Expect = 5e-05
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 85 TRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT-----VPTPPGLDVCSGPPSPLP 139
T+ + P + + +P SPT+++ + T PT P + P P P
Sbjct: 434 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 493
Query: 140 GAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 195
P P + ++P P PK A + +LAP P EK
Sbjct: 494 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP--EKPAPTT 551
Query: 196 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 254
E+ P + TTP+ AP T + A N+P +P P K+ T P P
Sbjct: 552 PEELAPTTPEEPTPTTPEEPAPTTPKAA--APNTPKEPAPTTP---KEPAPT-TPKEPAP 605
Query: 255 RSPTQDAAGVGPPASQGRGPA----GEPMGPEAGSKAELPPTVSRPP 297
+P + A P +G P P P+ + EL PT ++ P
Sbjct: 606 TTPKETA----PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 648
Score = 43.9 bits (102), Expect = 6e-04
Identities = 52/228 (22%), Positives = 75/228 (32%), Gaps = 32/228 (14%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP 154
P + + +P +PT+ + + T P P P P P E ++P
Sbjct: 327 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 386
Query: 155 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 214
P PK A P+ P KE A + P TTPK
Sbjct: 387 KEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPSP-----TTPKE 428
Query: 215 LAPVTNSSGKMALNSPQPGPVES--ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR 272
AP T S P P +S K+ T + P P +P + A P + +
Sbjct: 429 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK-EPAPTTPKEPA-----PTTPKK 482
Query: 273 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLA 320
P P + E PT ++ P + P+EP P K A
Sbjct: 483 PAPTTPKEPAPTTPKEPAPTTTKKPA------PTTPKEPAPTTPKETA 524
Score = 40.4 bits (93), Expect = 0.007
Identities = 52/221 (23%), Positives = 70/221 (31%), Gaps = 22/221 (9%)
Query: 99 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 158
P++ +P +PT+ +S T P S P +P AP P P
Sbjct: 265 PASTTPK---EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP------TTTKEPAPTT 315
Query: 159 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKE--NFDPLQYPETTPKGLA 216
P P ++ S P P K KE P + TTPK A
Sbjct: 316 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 375
Query: 217 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAG 276
P T P P + K T E P P +P + A P ++ P
Sbjct: 376 PTTKEPAPTTPKEPAPTAPK----KPAPTTPKE--PAPTTPKEPA----PTTTKEPSPT- 424
Query: 277 EPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQK 317
P P + P T P S + P+EP P K
Sbjct: 425 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 465
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 54.3 bits (129), Expect = 4e-07
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 98 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP--PQKGDEADVSSPH 155
+P A +PN +PT+ + + T P P P +P AP P+ + P
Sbjct: 627 TPKAAAPNTPKEPAPTTPKEPAPTTPKEP------APTTPKETAPTTPKGTAPTTLKEPA 680
Query: 156 PGEPN--VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 213
P P PK LA + + + AP P + + ++ P + TTPK
Sbjct: 681 PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP--KGTAPTTPKEPAPTTPKEPAPTTPK 738
Query: 214 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG-------SPLPRSPTQDAAGV-- 264
G AP T L P P + K+L T +G P P +P + A
Sbjct: 739 GTAPTT-------LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 791
Query: 265 --GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE---EPGPRLQKVL 319
P + P P S+ P T P + +S PE EP P+ +
Sbjct: 792 EPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENS 851
Query: 320 AKLP 323
K P
Sbjct: 852 PKEP 855
Score = 47.4 bits (111), Expect = 5e-05
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 85 TRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT-----VPTPPGLDVCSGPPSPLP 139
T+ + P + + +P SPT+++ + T PT P + P P P
Sbjct: 486 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 545
Query: 140 GAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 195
P P + ++P P PK A + +LAP P EK
Sbjct: 546 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP--EKPAPTT 603
Query: 196 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 254
E+ P + TTP+ AP T + A N+P +P P K+ T P P
Sbjct: 604 PEELAPTTPEEPTPTTPEEPAPTTPKAA--APNTPKEPAPTTP---KEPAPT-TPKEPAP 657
Query: 255 RSPTQDAAGVGPPASQGRGPA----GEPMGPEAGSKAELPPTVSRPP 297
+P + A P +G P P P+ + EL PT ++ P
Sbjct: 658 TTPKETA----PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 700
Score = 43.9 bits (102), Expect = 6e-04
Identities = 52/228 (22%), Positives = 75/228 (32%), Gaps = 32/228 (14%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP 154
P + + +P +PT+ + + T P P P P P E ++P
Sbjct: 379 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 438
Query: 155 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 214
P PK A P+ P KE A + P TTPK
Sbjct: 439 KEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPSP-----TTPKE 480
Query: 215 LAPVTNSSGKMALNSPQPGPVES--ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR 272
AP T S P P +S K+ T + P P +P + A P + +
Sbjct: 481 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK-EPAPTTPKEPA-----PTTPKK 534
Query: 273 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLA 320
P P + E PT ++ P + P+EP P K A
Sbjct: 535 PAPTTPKEPAPTTPKEPAPTTTKKPA------PTTPKEPAPTTPKETA 576
Score = 40.4 bits (93), Expect = 0.007
Identities = 52/221 (23%), Positives = 70/221 (31%), Gaps = 22/221 (9%)
Query: 99 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 158
P++ +P +PT+ +S T P S P +P AP P P
Sbjct: 317 PASTTPK---EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP------TTTKEPAPTT 367
Query: 159 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKE--NFDPLQYPETTPKGLA 216
P P ++ S P P K KE P + TTPK A
Sbjct: 368 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 427
Query: 217 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAG 276
P T P P + K T E P P +P + A P ++ P
Sbjct: 428 PTTKEPAPTTPKEPAPTAPK----KPAPTTPKE--PAPTTPKEPA----PTTTKEPSPT- 476
Query: 277 EPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQK 317
P P + P T P S + P+EP P K
Sbjct: 477 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 517
Score = 33.9 bits (76), Expect = 0.63
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 15/198 (7%)
Query: 551 NLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVV 610
N K+T + +E + + ++N S S T R + + + R + +
Sbjct: 100 NKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRKIKSSKN-SAANRELQKKLK 158
Query: 611 PKFNALNLPGQTPSSSSIPSLPALSESPNG--KGSLPVTSALPALLENGKTNGDPDCEAS 668
K N N + P+ P P + E+ +G G VT+ + ++ K + P +
Sbjct: 159 VKDNKKNRTKKKPT----PKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTA 214
Query: 669 APALTLSCL---EELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEP 725
P L + S+ET + +E + K+T + ++K+ S +E
Sbjct: 215 KPINPRPSLPPNSDTSKETSLTVNKETTVE-----TKETTTTNKQTSTDGKEKTTSAKET 269
Query: 726 EEVEETEEEEKGPRSSKL 743
+ +E+T ++ P S L
Sbjct: 270 QSIEKTSAKDLAPTSKVL 287
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 54.3 bits (129), Expect = 4e-07
Identities = 59/244 (24%), Positives = 87/244 (35%), Gaps = 33/244 (13%)
Query: 98 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP--PQKGDEADVSSPH 155
+P A +PN +PT+ + + T P P P +P AP P+ + P
Sbjct: 668 TPKAAAPNTPKEPAPTTPKEPAPTTPKEP------APTTPKETAPTTPKGTAPTTLKEPA 721
Query: 156 PGEPN--VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 213
P P PK LA + + + AP P + + ++ P + TTPK
Sbjct: 722 PTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTP--KGTAPTTPKEPAPTTPKEPAPTTPK 779
Query: 214 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG-------SPLPRSPTQDAAGV-- 264
G AP T L P P + K+L T +G P P +P + A
Sbjct: 780 GTAPTT-------LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPK 832
Query: 265 --GPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE---EPGPRLQKVL 319
P + P P S+ P T P + +S PE EP P+ +
Sbjct: 833 EPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENS 892
Query: 320 AKLP 323
K P
Sbjct: 893 PKEP 896
Score = 47.4 bits (111), Expect = 5e-05
Identities = 55/227 (24%), Positives = 84/227 (37%), Gaps = 26/227 (11%)
Query: 85 TRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLT-----VPTPPGLDVCSGPPSPLP 139
T+ + P + + +P SPT+++ + T PT P + P P P
Sbjct: 527 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 586
Query: 140 GAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 195
P P + ++P P PK A + +LAP P EK
Sbjct: 587 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTP--EKPAPTT 644
Query: 196 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLP 254
E+ P + TTP+ AP T + A N+P +P P K+ T P P
Sbjct: 645 PEELAPTTPEEPTPTTPEEPAPTTPKAA--APNTPKEPAPTTP---KEPAPT-TPKEPAP 698
Query: 255 RSPTQDAAGVGPPASQGRGPA----GEPMGPEAGSKAELPPTVSRPP 297
+P + A P +G P P P+ + EL PT ++ P
Sbjct: 699 TTPKETA----PTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEP 741
Score = 43.9 bits (102), Expect = 6e-04
Identities = 52/228 (22%), Positives = 75/228 (32%), Gaps = 32/228 (14%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP 154
P + + +P +PT+ + + T P P P P P E ++P
Sbjct: 420 PAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKEPAPTTP 479
Query: 155 HPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 214
P PK A P+ P KE A + P TTPK
Sbjct: 480 KEPAPTAPKKPAP-------------TTPKEPAPTTPKEPAPTTTKEPSP-----TTPKE 521
Query: 215 LAPVTNSSGKMALNSPQPGPVES--ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR 272
AP T S P P +S K+ T + P P +P + A P + +
Sbjct: 522 PAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK-EPAPTTPKEPA-----PTTPKK 575
Query: 273 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLA 320
P P + E PT ++ P + P+EP P K A
Sbjct: 576 PAPTTPKEPAPTTPKEPAPTTTKKPA------PTTPKEPAPTTPKETA 617
Score = 40.4 bits (93), Expect = 0.007
Identities = 52/221 (23%), Positives = 70/221 (31%), Gaps = 22/221 (9%)
Query: 99 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 158
P++ +P +PT+ +S T P S P +P AP P P
Sbjct: 358 PASTTPK---EPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAP------TTTKEPAPTT 408
Query: 159 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKE--NFDPLQYPETTPKGLA 216
P P ++ S P P K KE P + TTPK A
Sbjct: 409 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 468
Query: 217 PVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAG 276
P T P P + K T E P P +P + A P ++ P
Sbjct: 469 PTTKEPAPTTPKEPAPTAPK----KPAPTTPKE--PAPTTPKEPA----PTTTKEPSPT- 517
Query: 277 EPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQK 317
P P + P T P S + P+EP P K
Sbjct: 518 TPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTK 558
Score = 33.9 bits (76), Expect = 0.63
Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 15/198 (7%)
Query: 551 NLKRTYEKDHAELMEFKKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVV 610
N K+T + +E + + ++N S S T R + + + R + +
Sbjct: 141 NKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRKIKSSKN-SAANRELQKKLK 199
Query: 611 PKFNALNLPGQTPSSSSIPSLPALSESPNG--KGSLPVTSALPALLENGKTNGDPDCEAS 668
K N N + P+ P P + E+ +G G VT+ + ++ K + P +
Sbjct: 200 VKDNKKNRTKKKPT----PKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTA 255
Query: 669 APALTLSCL---EELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEP 725
P L + S+ET + +E + K+T + ++K+ S +E
Sbjct: 256 KPINPRPSLPPNSDTSKETSLTVNKETTVE-----TKETTTTNKQTSTDGKEKTTSAKET 310
Query: 726 EEVEETEEEEKGPRSSKL 743
+ +E+T ++ P S L
Sbjct: 311 QSIEKTSAKDLAPTSKVL 328
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 54.3 bits (129), Expect = 4e-07
Identities = 73/294 (24%), Positives = 104/294 (35%), Gaps = 61/294 (20%)
Query: 38 SLTSVDPAGHIIDLVNDQLPDISISEEDKKKNLALLEEAKLVSE--RFLTRRGRKSRSSP 95
+L D HII++V +P I +++ K+ + L K+ R R R S
Sbjct: 374 ALHGKDGRDHIIEVVGSSMPLIGDHQDEDKQLIVELVVNKMAQALPRQRQRDASPGRGSH 433
Query: 96 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGA-----------PPQ 144
G +PS + L S + + P P G GPP P PG PPQ
Sbjct: 434 GQTPSPGALPLGRQTSQQPAGPPAQQRPPPQG-----GPPQPGPGPQRQGPPLQQRPPPQ 488
Query: 145 KGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQ--------GRLA------PRPPPVEK 190
P G P +P+ L Q+ SQ GR + P PP +
Sbjct: 489 GQQHLSGLGPPAGSP-LPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPPAAR 547
Query: 191 SKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG 250
Q++ P +T+ G AP +SG + GP + G
Sbjct: 548 PPASPSPQRQAGPPQATRQTSVSGPAP-PKASGAPPGGQQRQGPPQKPPG---------- 596
Query: 251 SPLPRSPTQDAAGVGP-----------PASQGRGPAGEPMGPEAGSK--AELPP 291
P PT+ A+ GP P G GPAG P P+ K ++PP
Sbjct: 597 ---PAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPK-PQLAQKPSQDVPP 646
Score = 38.1 bits (87), Expect = 0.033
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 22/109 (20%)
Query: 189 EKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGW 248
++ K++ +E N P + +P S G+ +P PG +
Sbjct: 400 DEDKQLIVELVVNKMAQALPRQRQRDASPGRGSHGQ----TPSPGAL------------- 442
Query: 249 EGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPP 297
PL R +Q AG PPA Q P G P P G + + PP RPP
Sbjct: 443 ---PLGRQTSQQPAG--PPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPP 486
Score = 35.4 bits (80), Expect = 0.22
Identities = 51/198 (25%), Positives = 73/198 (36%), Gaps = 25/198 (12%)
Query: 96 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPP--GLDVCSGPPSPLPGAPPQKGDEADVSS 153
G P A SP SPTS+ + PP G S P + PGAPP ++
Sbjct: 495 GLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP--------AA 546
Query: 154 PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 213
P P+ + + Q VS P PP + ++ Q P P
Sbjct: 547 RPPASPSPQRQAGPPQATRQTSVS----GPAPPKASGAPPGGQQR-------QGPPQKPP 595
Query: 214 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRG 273
G A T + + A P+ GP ++ + G G P P+ + + V PPA+ G
Sbjct: 596 GPAGPTRQASQ-AGPVPRTGPPTTQQPRP-SGPGPAGRPKPQLAQKPSQDVPPPATAAAG 653
Query: 274 PAGEPMGPEAGSKAELPP 291
G P S A+ P
Sbjct: 654 --GPPHPQLKASPAQAQP 669
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 54.3 bits (129), Expect = 4e-07
Identities = 58/212 (27%), Positives = 72/212 (33%), Gaps = 24/212 (11%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGAPPQKGDEADVS 152
P P P S SP S P P G + GPP P P PP +G +
Sbjct: 134 PPGKPQGPPPQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQG 192
Query: 153 SPHPGEPNVPKGLADRKQNDQRKVS-------QGRLAPRPPPVEKSKEIAIEQKENFDPL 205
P PG+P P D+ ++ Q QG P+ PP K P
Sbjct: 193 PPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--------PP 244
Query: 206 QYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVG 265
P+G P G A + S GK EG+ P+ P A G
Sbjct: 245 PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN-PQGPPPPAG--G 301
Query: 266 PPASQGRGPAGEPMGPEAGSKAELPPTVSRPP 297
P PAG+P GP + P SRPP
Sbjct: 302 NPQQPQAPPAGQPQGPPRPPQGGRP---SRPP 330
Score = 53.9 bits (128), Expect = 6e-07
Identities = 68/265 (25%), Positives = 91/265 (34%), Gaps = 23/265 (8%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGAPPQKGDEADVS 152
P P P S SP S P P G + GPP P P PP +G
Sbjct: 73 PPGKPQGPPPQGDKSRSPRSPPGKPQG-PPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQG 131
Query: 153 SPHPGEPNVPKGLADRKQND-------QRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPL 205
P PG+P P D+ ++ Q QG P+ PP K + P
Sbjct: 132 PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQ 191
Query: 206 QYPET-TPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGV 264
P P+G P + S +P + G Q +G P P Q
Sbjct: 192 GPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQP-----QGPPPPPGKPQGPPPQ 246
Query: 265 GPPASQGRGPAGEPMGPEA--GSKAEL----PPTVSRPPLLRGLSWDSGPEEPGPRLQKV 318
G QG P G+P GP A GSK++ P PP G + P G Q+
Sbjct: 247 GGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQP 306
Query: 319 LAKLPLAEEEKRFAGKAGGKLAKAP 343
A P + + GG+ ++ P
Sbjct: 307 QAP-PAGQPQGPPRPPQGGRPSRPP 330
Score = 49.3 bits (116), Expect = 1e-05
Identities = 60/241 (24%), Positives = 77/241 (31%), Gaps = 29/241 (12%)
Query: 96 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGL--------DVCSGPPSPL---PGAPPQ 144
G+ P P P N P PPG D P SP G PPQ
Sbjct: 44 GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQ 103
Query: 145 KGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDP 204
G++ P PG+P P + Q G+ PP +KS+ + P
Sbjct: 104 GGNQPQGPPPPPGKPQGPPPQGGNR--PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGP 161
Query: 205 LQYPETTPKGLAPVTN-------SSGKMALNSPQPGPVES---ELGKQLLKTGWEGSPLP 254
P+G P GK P PG + + K G P
Sbjct: 162 PPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQG 221
Query: 255 RSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSR---PPLLRGLSWDSGPEEP 311
P GPP G+ P G P P+ G+K + PP + PP G S P
Sbjct: 222 PPPQGGNQPQGPPPPPGK-PQGPP--PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPP 278
Query: 312 G 312
G
Sbjct: 279 G 279
Score = 39.3 bits (90), Expect = 0.015
Identities = 48/187 (25%), Positives = 68/187 (36%), Gaps = 27/187 (14%)
Query: 135 PSPLPGAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEK 190
PS + G P PQ G++ P PG+P P QG P+ PP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP-------------PQGGNKPQGPPPPG 75
Query: 191 SKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG 250
+ Q + + P P+G P G P P P + + +G
Sbjct: 76 KPQGPPPQGDKSRSPRSPPGKPQGPPP----QGGNQPQGPPPPPGKPQGPPPQGGNRPQG 131
Query: 251 SPLPRSPTQDAAGVGPPASQGRGPAGEPMG--PEAGSKAE-LPPTVSRP--PLLRGLSWD 305
P P P Q G + R P G+P G P+ G++ + PP +P P +G
Sbjct: 132 PPPPGKP-QGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKP 190
Query: 306 SGPEEPG 312
GP PG
Sbjct: 191 QGPPPPG 197
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 53.5 bits (127), Expect = 8e-07
Identities = 128/610 (20%), Positives = 218/610 (35%), Gaps = 87/610 (14%)
Query: 50 DLVNDQLPDISISEEDKKKNLALL--EEAKLVSERFLTRRGRKSRSSPGDS--PSAVSPN 105
D ++ + I+ ++D + ++ L E AKL E ++ S S+ + PS S
Sbjct: 512 DALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA 571
Query: 106 LSPSASPTSSRSNSLTVPTP-PGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKG 164
P A P S ++ P P PG PP P P PP +SSP P++P G
Sbjct: 572 PVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSP----PSLPGG 627
Query: 165 LADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGK 224
A + +S P PPP+ + I P P T P S +
Sbjct: 628 TAI---SPPPPLSGDATIPPPPPLPEGVGIP-------SPSSLPGGTAIPPPPPLPGSAR 677
Query: 225 MALNSPQPGPVESELG---KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGP 281
+ P P P+ G G G P P P G+ PP GP P P
Sbjct: 678 IP---PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPP 734
Query: 282 EAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAK 341
G +PP PP G + P P K L K + ++ L++
Sbjct: 735 GMG----MPPP---PPF--GFGVPAAPVLPFGLTPKKLYKPEVQLRRPNWSKLVAEDLSQ 785
Query: 342 APGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAI 401
F +V+ R + + + Q D E E++K + + +
Sbjct: 786 ----DCFWTKVKEDRFENNELFAKLTLTFSAQTKTSKAKKD-QEGGEEKKSVQKKKVKEL 840
Query: 402 EEEESKSGLDVMPNISDVLLRKLRVHR-SLPGSAPPLTEKEVENVFVQL-------SLAF 453
+ +SK+ ++ + + + L + LTE ++N+ Q+ L+
Sbjct: 841 KVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSE 900
Query: 454 RNDSY-----------------TLESRINQAERERNLTEENTEKELENFKASITSSASLW 496
D Y L R+N L + +++EN K I S +
Sbjct: 901 LKDEYDDLAESEQFGVVMGTVPRLRPRLNAI-----LFKLQFSEQVENIKPEIVSVTAAC 955
Query: 497 HHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVG---AVRQEKRMSKATEVMMQYVENLK 553
E++ LLE ++ S A G + + R +K+T+ M + L
Sbjct: 956 EELRKSESFSNLLEITLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSTDQKMTLLHFLA 1015
Query: 554 RTYEKDHAELMEF-KKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPK 612
E D+ ++++F +LA+ V + +R + L KN+ + + ++ V +
Sbjct: 1016 ELCENDYPDVLKFPDELAH-------------VEKASRVSAENLQKNLDQMKKQISDVER 1062
Query: 613 FNALNLPGQT 622
+ N P T
Sbjct: 1063 -DVQNFPAAT 1071
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 53.5 bits (127), Expect = 8e-07
Identities = 128/610 (20%), Positives = 218/610 (35%), Gaps = 87/610 (14%)
Query: 50 DLVNDQLPDISISEEDKKKNLALL--EEAKLVSERFLTRRGRKSRSSPGDS--PSAVSPN 105
D ++ + I+ ++D + ++ L E AKL E ++ S S+ + PS S
Sbjct: 521 DALHSEKQQIATEKQDLEAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRA 580
Query: 106 LSPSASPTSSRSNSLTVPTP-PGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKG 164
P A P S ++ P P PG PP P P PP +SSP P++P G
Sbjct: 581 PVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSP----PSLPGG 636
Query: 165 LADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGK 224
A + +S P PPP+ + I P P T P S +
Sbjct: 637 TAI---SPPPPLSGDATIPPPPPLPEGVGIP-------SPSSLPGGTAIPPPPPLPGSAR 686
Query: 225 MALNSPQPGPVESELG---KQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGP 281
+ P P P+ G G G P P P G+ PP GP P P
Sbjct: 687 IP---PPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPPPP 743
Query: 282 EAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAK 341
G +PP PP G + P P K L K + ++ L++
Sbjct: 744 GMG----MPPP---PPF--GFGVPAAPVLPFGLTPKKLYKPEVQLRRPNWSKLVAEDLSQ 794
Query: 342 APGLKDFQIQVQPVRMQKLTKLREEHILMRNQNLVGLKLPDLSEAAEQEKGLPSELSPAI 401
F +V+ R + + + Q D E E++K + + +
Sbjct: 795 ----DCFWTKVKEDRFENNELFAKLTLTFSAQTKTSKAKKD-QEGGEEKKSVQKKKVKEL 849
Query: 402 EEEESKSGLDVMPNISDVLLRKLRVHR-SLPGSAPPLTEKEVENVFVQL-------SLAF 453
+ +SK+ ++ + + + L + LTE ++N+ Q+ L+
Sbjct: 850 KVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSE 909
Query: 454 RNDSY-----------------TLESRINQAERERNLTEENTEKELENFKASITSSASLW 496
D Y L R+N L + +++EN K I S +
Sbjct: 910 LKDEYDDLAESEQFGVVMGTVPRLRPRLNAI-----LFKLQFSEQVENIKPEIVSVTAAC 964
Query: 497 HHCEHRETYQKLLEDIAVLHRLAARLSSRAEVVG---AVRQEKRMSKATEVMMQYVENLK 553
E++ LLE ++ S A G + + R +K+T+ M + L
Sbjct: 965 EELRKSESFSNLLEITLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSTDQKMTLLHFLA 1024
Query: 554 RTYEKDHAELMEF-KKLANQNSSRSCGPSEDGVPRTARSMSLTLGKNMPRRRVSVAVVPK 612
E D+ ++++F +LA+ V + +R + L KN+ + + ++ V +
Sbjct: 1025 ELCENDYPDVLKFPDELAH-------------VEKASRVSAENLQKNLDQMKKQISDVER 1071
Query: 613 FNALNLPGQT 622
+ N P T
Sbjct: 1072 -DVQNFPAAT 1080
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 53.1 bits (126), Expect = 1e-06
Identities = 71/256 (27%), Positives = 91/256 (35%), Gaps = 25/256 (9%)
Query: 104 PNLSPSASPTSSRSNSLTVP---TPPGLDVC--SGPPSPLPGAPPQKGDEADVSSPHPGE 158
P+L+P P + S LT P TPP C PPSPL PP+ + +++P
Sbjct: 539 PSLAPP--PLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPET--PSSIATP---P 591
Query: 159 PNVPKGLADRKQNDQRKVSQGRLA---PRPPPVEKSKEIAIEQKENFDPLQYPETTPKGL 215
P P LA LA P+ PP + P P TP
Sbjct: 592 PQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQ 651
Query: 216 APVTNSSGKMALNSP-QPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQ--GR 272
AP N+ L +P P P SP P+Q + P Q
Sbjct: 652 AP--NALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPS 709
Query: 273 GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGP-----EEPGPRLQKVLAKLPLAEE 327
PA PM P A + PP ++ PPL S + P P PR+ +LA PL
Sbjct: 710 PPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVP 769
Query: 328 EKRFAGKAGGKLAKAP 343
A LAK P
Sbjct: 770 PSPPASLPMSPLAKPP 785
Score = 45.4 bits (106), Expect = 2e-04
Identities = 57/226 (25%), Positives = 79/226 (34%), Gaps = 20/226 (8%)
Query: 99 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGE 158
P A P P + P S + P P + + PP +P +PP + ++ P
Sbjct: 729 PLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKP---P 785
Query: 159 PNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGL--- 215
P P LA Q S P P S + + P Q P L
Sbjct: 786 PQAPPALATPPL--QALPSPPASFPGQAPFSPSASLPMSPLAT-PPPQAPPVLAAPLLQV 842
Query: 216 --APVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLP--RSPTQDAAG---VGPPA 268
+P + + + P PGP S G +L G P P RSP+ +G G +
Sbjct: 843 PPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS 902
Query: 269 SQGRGP---AGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEP 311
S P G GPE G+ A PP + +W GP P
Sbjct: 903 SATSTPEELRGYDSGPEGGAAAS-PPPDAELAACHPAAWSRGPAPP 947
Score = 44.7 bits (104), Expect = 4e-04
Identities = 58/225 (25%), Positives = 79/225 (35%), Gaps = 38/225 (16%)
Query: 94 SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSS 153
SP SP +P SP ASP S S + PP L + PP +P +PP + ++
Sbjct: 666 SPPPSPPVQAP-FSPPASPPVSPSATPPSQAPPSL---AAPPLQVPPSPPASPPMSPSAT 721
Query: 154 PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 213
P P P P A Q + P PP P P TP
Sbjct: 722 PPPQAP--PPLAAPPLQ----------VPPSPPA---------------SPPMSPSATPP 754
Query: 214 GLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRG 273
P ++ + + P P S L K + P +P A P + G+
Sbjct: 755 PRVPPLLAAPPLQV---PPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQA 811
Query: 274 P----AGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPR 314
P A PM P A + PP ++ P L S + P PR
Sbjct: 812 PFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 856
Score = 44.3 bits (103), Expect = 5e-04
Identities = 71/260 (27%), Positives = 92/260 (35%), Gaps = 64/260 (24%)
Query: 93 SSPGDSPSAVSPNL--------------SPSASPTSSRSNSLTVPTPPGLDVCSGPPSPL 138
+SP SPSA P+ SP ASP S S + PP L + PP +
Sbjct: 681 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL---AAPPLQV 737
Query: 139 PGAPPQKGDEADVSSPHPGEPNVPKGLA----DRKQNDQRKVSQGRLAPRPPPVEKSKEI 194
P +PP + ++P P VP LA + + LA PP +
Sbjct: 738 PPSPPASPPMSPSATP---PPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALAT 794
Query: 195 AIEQKENFDPLQYPETTPKGLAPVTNSS----GKMALNSPQPGPVESELGKQLLKTGWEG 250
Q P +P G AP + S+ +A PQ PV L LL+
Sbjct: 795 PPLQALPSPPASFP-----GQAPFSPSASLPMSPLATPPPQAPPV---LAAPLLQV--PP 844
Query: 251 SPLPRSPTQD---------------------AAGVGPPASQGRGPAGEPMGPEAGSKAEL 289
SP P SPT A GPP R P+ GP+ +
Sbjct: 845 SP-PASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSS- 902
Query: 290 PPTVSRPPLLRGLSWDSGPE 309
S P LRG +DSGPE
Sbjct: 903 -SATSTPEELRG--YDSGPE 919
Score = 43.5 bits (101), Expect = 8e-04
Identities = 57/213 (26%), Positives = 82/213 (38%), Gaps = 32/213 (15%)
Query: 93 SSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVS 152
++P P + SP +PS S T +R P PP + + P+ LP +PP A
Sbjct: 292 AAPALGPLSSSPLATPSPSGTKAR------PVPPPDNAATPLPATLPPSPPL----ATPL 341
Query: 153 SPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPE--T 210
P P+ P L SQ + PP++ + + P+Q P T
Sbjct: 342 PLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSL-----QTIPPIQVPHSLT 396
Query: 211 TPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQ 270
+P AP +AL+S Q + LG L+ S L SP Q A + P+
Sbjct: 397 SPSLQAP----PSPLALSSLQ---ATTSLGSPTLQA--THSFLTMSPRQTQASLTSPSRP 447
Query: 271 GRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLS 303
P P P + LP + PPL LS
Sbjct: 448 ASTP---PDSPPLQAPLSLP---ASPPLQTSLS 474
Score = 42.7 bits (99), Expect = 0.001
Identities = 59/234 (25%), Positives = 80/234 (34%), Gaps = 30/234 (12%)
Query: 98 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV------ 151
SP P +PS+ T + +PP + S P SPL PPQ +
Sbjct: 574 SPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAP 633
Query: 152 SSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETT 211
SP P P + + V + PPP S + P P T
Sbjct: 634 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPP---SPPVQAPFSPPASPPVSPSAT 690
Query: 212 PKGLAPVTNSSGKMAL-NSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPAS- 269
P AP + ++ + + SP P S +P P++P AA PP
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSP----------SATPPPQAPPPLAA---PPLQV 737
Query: 270 QGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLP 323
PA PM P A +PP ++ PPL P P LAK P
Sbjct: 738 PPSPPASPPMSPSATPPPRVPPLLAAPPL------QVPPSPPASLPMSPLAKPP 785
Score = 32.7 bits (73), Expect = 1.4
Identities = 60/277 (21%), Positives = 85/277 (30%), Gaps = 56/277 (20%)
Query: 85 TRRGRKSRSSPGDSPSAV--------SPNLSPSASPTSSRSNSLTVPTPPGLD------- 129
TR S +P P A + N SP + R++ T P P G
Sbjct: 80 TRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 139
Query: 130 --VCSGPPSPLPGAPP-QKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPP 186
V G + P G D S P PG P+ +A R + +V PRP
Sbjct: 140 ETVARGKATEAPKRSALSAGARRDTSGPTPGTPS--PAMARRSRAAGTEVG----LPRPA 193
Query: 187 PVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKT 246
P + P +G +S+ + + P P ++
Sbjct: 194 PSAR-----------------PRPPTEGPRKSVSSASEHSTTEPSPA-----ARRRPSAG 231
Query: 247 GWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDS 306
G P RS + A + PA G G P P S+ P +GL
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQ----------PKPKGLQALR 281
Query: 307 GPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAP 343
P+ PR A PL+ +G K P
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVP 318
>gi|111118972 collagen, type XI, alpha 2 isoform 2 preproprotein [Homo
sapiens]
Length = 1650
Score = 52.0 bits (123), Expect = 2e-06
Identities = 74/276 (26%), Positives = 95/276 (34%), Gaps = 49/276 (17%)
Query: 87 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNS------LTVPTPPGLDVCSGPPSP--- 137
+G K P P + P P A+ + G +GPP P
Sbjct: 1012 KGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGL 1071
Query: 138 --LPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 195
LPG +KG+ DV P P P+G A D + G + PP EK
Sbjct: 1072 QGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG---- 1127
Query: 196 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPR 255
E E+ P E KG G+ S QPG G P P+
Sbjct: 1128 -EPGESGSPGIQGEPGVKGPRGERGEKGE----SGQPGE--------------PGPPGPK 1168
Query: 256 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 309
PT D G P G GP GE P G + P G + ++GP
Sbjct: 1169 GPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGP- 1227
Query: 310 EPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKA-PG 344
PGP ++ A P +E G+ GGK AK PG
Sbjct: 1228 -PGPLGKRGPAGSPGSE------GRQGGKGAKGDPG 1256
Score = 41.6 bits (96), Expect = 0.003
Identities = 54/204 (26%), Positives = 73/204 (35%), Gaps = 49/204 (24%)
Query: 120 LTVPTPPGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVS 177
L + PPG +G P PL PG+P KG+ D+ P P P+GL R+
Sbjct: 397 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLG---PQGPRGPQGLTGPPGKAGRRGR 453
Query: 178 QGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES 237
G R P + ++ FD GL + G
Sbjct: 454 AGADGARGMPGDPG----VKGDRGFD----------GLPGLPGEKGH-----------RG 488
Query: 238 ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR-GPAGEPMGPEAGSKAELPPTVSRP 296
+ G Q G G P D +GP G GP G +GP+ PP + P
Sbjct: 489 DTGAQ----GLPGPPGEDGERGDDGEIGPRGLPGESGPRGL-LGPKG------PPGIPGP 537
Query: 297 PLLRGLSWDSGPE-------EPGP 313
P +RG+ GP+ EPGP
Sbjct: 538 PGVRGMDGPQGPKGSLGPQGEPGP 561
Score = 41.2 bits (95), Expect = 0.004
Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 57/228 (25%)
Query: 125 PPGLDVCSGPPSPLP--GAPPQKGDEADVSSPH-PGEPNV--PKGLADRKQNDQRKVSQG 179
P G D GPP + G P +KG+ + SP GEP V P+G K + G
Sbjct: 1104 PNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1163
Query: 180 RLAPRPPPVEKSKEIAIEQKENFDPLQYP-------ETTPKGLAPVTN------------ 220
P+ P + K N P+ +P E P+G
Sbjct: 1164 PPGPKGPTGDDGP------KGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1217
Query: 221 SSGKMALNSPQPGPVESELGKQ--LLKTGWEGSPLPRSPTQDAAGVGPPASQG----RGP 274
S G N P PGP LGK+ G EG + D +G P G GP
Sbjct: 1218 SPGPTGENGP-PGP----LGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGP 1272
Query: 275 AGEPMGPEA-----GSKAEL----------PPTVSRPPLLRGLSWDSG 307
AG+P GP+ GS + PP PP L GL D+G
Sbjct: 1273 AGKP-GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAG 1319
Score = 40.4 bits (93), Expect = 0.007
Identities = 51/198 (25%), Positives = 71/198 (35%), Gaps = 28/198 (14%)
Query: 125 PPGLDVCSGPPSP-----LPGAPPQKGDEA-DVSSPHPGEPNV--PKGLADRKQNDQRKV 176
P G GPP P LPG P Q+G+ + PG P V P+G A +
Sbjct: 798 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERG 857
Query: 177 SQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVE 236
G P PP + A ++ DP G A + G+ L GP
Sbjct: 858 HPG--PPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGP-- 913
Query: 237 SELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRP 296
G +G+ P P A G P +G +G P+GP + PP +
Sbjct: 914 ----------GLKGNEGPSGPPGPA---GSPGERGAAGSGGPIGPPGRPGPQGPPGAAGE 960
Query: 297 PLLRGLSWDSGPEEPGPR 314
+G+ + GP P R
Sbjct: 961 ---KGVPGEKGPIGPTGR 975
Score = 34.3 bits (77), Expect = 0.48
Identities = 65/253 (25%), Positives = 82/253 (32%), Gaps = 57/253 (22%)
Query: 71 ALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDV 130
A+L++A+L G R P P SP L S L P G
Sbjct: 390 AILQQARLALRGPPGPMGYTGRPGPLGQPG--SPGLK-------GESGDLGPQGPRGPQG 440
Query: 131 CSGPPSP--------------LPGAPPQKGDEADVSSPH-PGEPNV-----PKGLADRKQ 170
+GPP +PG P KGD P PGE +GL
Sbjct: 441 LTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPG 500
Query: 171 NDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP 230
D + G + PR P E + K P P P G+ + G P
Sbjct: 501 EDGERGDDGEIGPRGLPGESGPRGLLGPK---GPPGIPG--PPGVRGMDGPQGPKGSLGP 555
Query: 231 Q--PGPV--ESELGKQLL-----------------KTGWEGSPLPRSPTQDAAGVGPPAS 269
Q PGP + G Q L K G G P P GPP +
Sbjct: 556 QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGT 615
Query: 270 QG-RGPAGEPMGP 281
+G +GP+G P GP
Sbjct: 616 KGNQGPSG-PQGP 627
>gi|111118968 collagen, type XI, alpha 2 isoform 3 preproprotein [Homo
sapiens]
Length = 1629
Score = 52.0 bits (123), Expect = 2e-06
Identities = 74/276 (26%), Positives = 95/276 (34%), Gaps = 49/276 (17%)
Query: 87 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNS------LTVPTPPGLDVCSGPPSP--- 137
+G K P P + P P A+ + G +GPP P
Sbjct: 991 KGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGL 1050
Query: 138 --LPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 195
LPG +KG+ DV P P P+G A D + G + PP EK
Sbjct: 1051 QGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG---- 1106
Query: 196 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPR 255
E E+ P E KG G+ S QPG G P P+
Sbjct: 1107 -EPGESGSPGIQGEPGVKGPRGERGEKGE----SGQPGE--------------PGPPGPK 1147
Query: 256 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 309
PT D G P G GP GE P G + P G + ++GP
Sbjct: 1148 GPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGP- 1206
Query: 310 EPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKA-PG 344
PGP ++ A P +E G+ GGK AK PG
Sbjct: 1207 -PGPLGKRGPAGSPGSE------GRQGGKGAKGDPG 1235
Score = 41.6 bits (96), Expect = 0.003
Identities = 54/204 (26%), Positives = 73/204 (35%), Gaps = 49/204 (24%)
Query: 120 LTVPTPPGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVS 177
L + PPG +G P PL PG+P KG+ D+ P P P+GL R+
Sbjct: 376 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLG---PQGPRGPQGLTGPPGKAGRRGR 432
Query: 178 QGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES 237
G R P + ++ FD GL + G
Sbjct: 433 AGADGARGMPGDPG----VKGDRGFD----------GLPGLPGEKGH-----------RG 467
Query: 238 ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR-GPAGEPMGPEAGSKAELPPTVSRP 296
+ G Q G G P D +GP G GP G +GP+ PP + P
Sbjct: 468 DTGAQ----GLPGPPGEDGERGDDGEIGPRGLPGESGPRGL-LGPKG------PPGIPGP 516
Query: 297 PLLRGLSWDSGPE-------EPGP 313
P +RG+ GP+ EPGP
Sbjct: 517 PGVRGMDGPQGPKGSLGPQGEPGP 540
Score = 41.2 bits (95), Expect = 0.004
Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 57/228 (25%)
Query: 125 PPGLDVCSGPPSPLP--GAPPQKGDEADVSSPH-PGEPNV--PKGLADRKQNDQRKVSQG 179
P G D GPP + G P +KG+ + SP GEP V P+G K + G
Sbjct: 1083 PNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1142
Query: 180 RLAPRPPPVEKSKEIAIEQKENFDPLQYP-------ETTPKGLAPVTN------------ 220
P+ P + K N P+ +P E P+G
Sbjct: 1143 PPGPKGPTGDDGP------KGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1196
Query: 221 SSGKMALNSPQPGPVESELGKQ--LLKTGWEGSPLPRSPTQDAAGVGPPASQG----RGP 274
S G N P PGP LGK+ G EG + D +G P G GP
Sbjct: 1197 SPGPTGENGP-PGP----LGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGP 1251
Query: 275 AGEPMGPEA-----GSKAEL----------PPTVSRPPLLRGLSWDSG 307
AG+P GP+ GS + PP PP L GL D+G
Sbjct: 1252 AGKP-GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAG 1298
Score = 40.4 bits (93), Expect = 0.007
Identities = 51/198 (25%), Positives = 71/198 (35%), Gaps = 28/198 (14%)
Query: 125 PPGLDVCSGPPSP-----LPGAPPQKGDEA-DVSSPHPGEPNV--PKGLADRKQNDQRKV 176
P G GPP P LPG P Q+G+ + PG P V P+G A +
Sbjct: 777 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERG 836
Query: 177 SQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVE 236
G P PP + A ++ DP G A + G+ L GP
Sbjct: 837 HPG--PPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGP-- 892
Query: 237 SELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRP 296
G +G+ P P A G P +G +G P+GP + PP +
Sbjct: 893 ----------GLKGNEGPSGPPGPA---GSPGERGAAGSGGPIGPPGRPGPQGPPGAAGE 939
Query: 297 PLLRGLSWDSGPEEPGPR 314
+G+ + GP P R
Sbjct: 940 ---KGVPGEKGPIGPTGR 954
Score = 34.3 bits (77), Expect = 0.48
Identities = 65/253 (25%), Positives = 82/253 (32%), Gaps = 57/253 (22%)
Query: 71 ALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDV 130
A+L++A+L G R P P SP L S L P G
Sbjct: 369 AILQQARLALRGPPGPMGYTGRPGPLGQPG--SPGLK-------GESGDLGPQGPRGPQG 419
Query: 131 CSGPPSP--------------LPGAPPQKGDEADVSSPH-PGEPNV-----PKGLADRKQ 170
+GPP +PG P KGD P PGE +GL
Sbjct: 420 LTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPG 479
Query: 171 NDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP 230
D + G + PR P E + K P P P G+ + G P
Sbjct: 480 EDGERGDDGEIGPRGLPGESGPRGLLGPK---GPPGIPG--PPGVRGMDGPQGPKGSLGP 534
Query: 231 Q--PGPV--ESELGKQLL-----------------KTGWEGSPLPRSPTQDAAGVGPPAS 269
Q PGP + G Q L K G G P P GPP +
Sbjct: 535 QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGT 594
Query: 270 QG-RGPAGEPMGP 281
+G +GP+G P GP
Sbjct: 595 KGNQGPSG-PQGP 606
>gi|111118970 collagen, type XI, alpha 2 isoform 1 preproprotein [Homo
sapiens]
Length = 1736
Score = 52.0 bits (123), Expect = 2e-06
Identities = 74/276 (26%), Positives = 95/276 (34%), Gaps = 49/276 (17%)
Query: 87 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNS------LTVPTPPGLDVCSGPPSP--- 137
+G K P P + P P A+ + G +GPP P
Sbjct: 1098 KGNKGEHGPPGPPGPIGPVGQPGAAGADGEPGARGPQGHFGAKGDEGTRGFNGPPGPIGL 1157
Query: 138 --LPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIA 195
LPG +KG+ DV P P P+G A D + G + PP EK
Sbjct: 1158 QGLPGPSGEKGETGDVGPMGPPGPPGPRGPAGPNGADGPQGPPGGVGNLGPPGEKG---- 1213
Query: 196 IEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPR 255
E E+ P E KG G+ S QPG G P P+
Sbjct: 1214 -EPGESGSPGIQGEPGVKGPRGERGEKGE----SGQPGE--------------PGPPGPK 1254
Query: 256 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 309
PT D G P G GP GE P G + P G + ++GP
Sbjct: 1255 GPTGDDGPKGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPGSPGPTGENGP- 1313
Query: 310 EPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKA-PG 344
PGP ++ A P +E G+ GGK AK PG
Sbjct: 1314 -PGPLGKRGPAGSPGSE------GRQGGKGAKGDPG 1342
Score = 41.6 bits (96), Expect = 0.003
Identities = 54/204 (26%), Positives = 73/204 (35%), Gaps = 49/204 (24%)
Query: 120 LTVPTPPGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVS 177
L + PPG +G P PL PG+P KG+ D+ P P P+GL R+
Sbjct: 483 LALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLG---PQGPRGPQGLTGPPGKAGRRGR 539
Query: 178 QGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES 237
G R P + ++ FD GL + G
Sbjct: 540 AGADGARGMPGDPG----VKGDRGFD----------GLPGLPGEKGH-----------RG 574
Query: 238 ELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR-GPAGEPMGPEAGSKAELPPTVSRP 296
+ G Q G G P D +GP G GP G +GP+ PP + P
Sbjct: 575 DTGAQ----GLPGPPGEDGERGDDGEIGPRGLPGESGPRGL-LGPKG------PPGIPGP 623
Query: 297 PLLRGLSWDSGPE-------EPGP 313
P +RG+ GP+ EPGP
Sbjct: 624 PGVRGMDGPQGPKGSLGPQGEPGP 647
Score = 41.2 bits (95), Expect = 0.004
Identities = 64/228 (28%), Positives = 82/228 (35%), Gaps = 57/228 (25%)
Query: 125 PPGLDVCSGPPSPLP--GAPPQKGDEADVSSPH-PGEPNV--PKGLADRKQNDQRKVSQG 179
P G D GPP + G P +KG+ + SP GEP V P+G K + G
Sbjct: 1190 PNGADGPQGPPGGVGNLGPPGEKGEPGESGSPGIQGEPGVKGPRGERGEKGESGQPGEPG 1249
Query: 180 RLAPRPPPVEKSKEIAIEQKENFDPLQYP-------ETTPKGLAPVTN------------ 220
P+ P + K N P+ +P E P+G
Sbjct: 1250 PPGPKGPTGDDGP------KGNPGPVGFPGDPGPPGEGGPRGQDGAKGDRGEDGEPGQPG 1303
Query: 221 SSGKMALNSPQPGPVESELGKQ--LLKTGWEGSPLPRSPTQDAAGVGPPASQG----RGP 274
S G N P PGP LGK+ G EG + D +G P G GP
Sbjct: 1304 SPGPTGENGP-PGP----LGKRGPAGSPGSEGRQGGKGAKGDPGAIGAPGKTGPVGPAGP 1358
Query: 275 AGEPMGPEA-----GSKAEL----------PPTVSRPPLLRGLSWDSG 307
AG+P GP+ GS + PP PP L GL D+G
Sbjct: 1359 AGKP-GPDGLRGLPGSVGQQGRPGATGQAGPPGPVGPPGLPGLRGDAG 1405
Score = 40.4 bits (93), Expect = 0.007
Identities = 51/198 (25%), Positives = 71/198 (35%), Gaps = 28/198 (14%)
Query: 125 PPGLDVCSGPPSP-----LPGAPPQKGDEA-DVSSPHPGEPNV--PKGLADRKQNDQRKV 176
P G GPP P LPG P Q+G+ + PG P V P+G A +
Sbjct: 884 PNGFPGPKGPPGPPGKDGLPGHPGQRGEVGFQGKTGPPGPPGVVGPQGAAGETGPMGERG 943
Query: 177 SQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVE 236
G P PP + A ++ DP G A + G+ L GP
Sbjct: 944 HPG--PPGPPGEQGLPGTAGKEGTKGDPGPPGAPGKDGPAGLRGFPGERGLPGTAGGP-- 999
Query: 237 SELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRP 296
G +G+ P P A G P +G +G P+GP + PP +
Sbjct: 1000 ----------GLKGNEGPSGPPGPA---GSPGERGAAGSGGPIGPPGRPGPQGPPGAAGE 1046
Query: 297 PLLRGLSWDSGPEEPGPR 314
+G+ + GP P R
Sbjct: 1047 ---KGVPGEKGPIGPTGR 1061
Score = 34.3 bits (77), Expect = 0.48
Identities = 65/253 (25%), Positives = 82/253 (32%), Gaps = 57/253 (22%)
Query: 71 ALLEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDV 130
A+L++A+L G R P P SP L S L P G
Sbjct: 476 AILQQARLALRGPPGPMGYTGRPGPLGQPG--SPGLK-------GESGDLGPQGPRGPQG 526
Query: 131 CSGPPSP--------------LPGAPPQKGDEADVSSPH-PGEPNV-----PKGLADRKQ 170
+GPP +PG P KGD P PGE +GL
Sbjct: 527 LTGPPGKAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGLPGPPG 586
Query: 171 NDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSP 230
D + G + PR P E + K P P P G+ + G P
Sbjct: 587 EDGERGDDGEIGPRGLPGESGPRGLLGPK---GPPGIPG--PPGVRGMDGPQGPKGSLGP 641
Query: 231 Q--PGPV--ESELGKQLL-----------------KTGWEGSPLPRSPTQDAAGVGPPAS 269
Q PGP + G Q L K G G P P GPP +
Sbjct: 642 QGEPGPPGQQGTPGTQGLPGPQGAIGPHGEKGPQGKPGLPGMPGSDGPPGHPGKEGPPGT 701
Query: 270 QG-RGPAGEPMGP 281
+G +GP+G P GP
Sbjct: 702 KGNQGPSG-PQGP 713
>gi|44662807 hypothetical protein LOC388407 [Homo sapiens]
Length = 251
Score = 51.6 bits (122), Expect = 3e-06
Identities = 63/246 (25%), Positives = 85/246 (34%), Gaps = 41/246 (16%)
Query: 73 LEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCS 132
L L E R G+ +SSP SPS L P T ++ S P+ P CS
Sbjct: 10 LRALDLYPEPAFLRSGKDPKSSPASSPSFAV--LGPEVRSTGGQAGSRRRPSAP----CS 63
Query: 133 GPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLAD------RKQNDQRKVSQGRLAPRPP 186
+ GAP G SP G P P G A R N G P
Sbjct: 64 QDRAAAEGAPALLG-----GSPSSGSPGHPPGSAFGVEAGCRALNVSEHARGGFALGLPF 118
Query: 187 PVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKT 246
+ + + DP PE AP++++ G+ S ++
Sbjct: 119 GLSGGAYLFLLLDGAGDPKPTPE------APISSADGRAWFPS---------------ES 157
Query: 247 GWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDS 306
W+ LP+ P +G P A G GP P GP G+ + P L R D
Sbjct: 158 SWQ---LPQLPAGSTSGSEPRARPGLGPRQLPTGPRDGAAGQGPGRGLTARLGREREIDC 214
Query: 307 GPEEPG 312
GP + G
Sbjct: 215 GPRQAG 220
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 51.2 bits (121), Expect = 4e-06
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 620 GQTPSSSSIPSLPALSESPNGKGSLP------------VTSALPALLENGKTNGD--PDC 665
G +S +P+ E P G LP VT P L+ G G P
Sbjct: 815 GPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPAL 874
Query: 666 EASAPALTLSCLEELSQETKARMEEEAYSKGFQEGLKKTKE-----LQDLKEEEEEQKSE 720
E + ++ +E +E + EEE + +E ++ +E ++ +EEEEE + E
Sbjct: 875 EEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEE 934
Query: 721 SPEEPEEVEETEEEEKGPRSSKLEEL 746
EE E+EE EEEE +LEE+
Sbjct: 935 FEEEEGELEEEEEEEDEEEEEELEEV 960
Score = 37.7 bits (86), Expect = 0.044
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 689 EEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEE 745
EEE + + F+E E +L+EEEEE E EE EE+EE E+ E G ++EE
Sbjct: 927 EEEEFEEEFEE------EEGELEEEEEE---EDEEEEEELEEVEDLEFGTAGGEVEE 974
Score = 35.8 bits (81), Expect = 0.17
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 701 LKKTKELQDLKEEEEEQKSESPEEPEEVEETEEEEKGPRSSKLEELVHF 749
+ + E ++ +EEEEE++ E EE E+ EE EE+E+ + EE F
Sbjct: 883 INSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEF 931
Score = 35.0 bits (79), Expect = 0.28
Identities = 57/227 (25%), Positives = 71/227 (31%), Gaps = 43/227 (18%)
Query: 94 SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSS 153
+P P A SP +P P P P + S P P G P G V S
Sbjct: 649 APVPPPEAPSPFRAPPFHPPG--------PMPSVGSMPSAGPMPSAGPMPSAGP---VPS 697
Query: 154 PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPK 213
PG P L +S L PP + E N DP+ P TP
Sbjct: 698 ARPGPPTTANHLG---------LSVPGLVSVPPRLLPGPENH-RAGSNEDPILAPSGTPP 747
Query: 214 GLAPVTNSSGKMALNSPQPGPV--------------ESELGKQLLKTGWEGSPLPRSPTQ 259
P + G P+P V ES+ ++ PLP P
Sbjct: 748 PTIPPDETFGGRV---PRPAFVHYDKEEASDVEISLESDSDDSVVIVPEGLPPLPPPPPS 804
Query: 260 DA-----AGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRG 301
A A GPP + PA E + LPP PP + G
Sbjct: 805 GATPPPIAPTGPPTASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPG 851
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 51.2 bits (121), Expect = 4e-06
Identities = 53/202 (26%), Positives = 75/202 (37%), Gaps = 21/202 (10%)
Query: 98 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGAPPQKGDEADVSSPH 155
S ++ ++S SP+ N P+P G + GPP P P PP +G P
Sbjct: 15 SAQNLNEDVSQEESPSLIAGNPQG-PSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPP 73
Query: 156 PGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGL 215
PG+P P D+ ++ + + P+ PP + K P P+G
Sbjct: 74 PGKPQGPPPQGDKSRSPRSPPGK----PQGPPPQGGKPQG--------PPPQGGNKPQGP 121
Query: 216 APVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPA 275
P G A + S GK EG+ P+ P A G P PA
Sbjct: 122 PPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN-PQGPPPPAG--GNPQQPQAPPA 178
Query: 276 GEPMGPEAGSKAELPPTVSRPP 297
G+P GP + P SRPP
Sbjct: 179 GQPQGPPRPPQGGRP---SRPP 197
Score = 35.0 bits (79), Expect = 0.28
Identities = 29/119 (24%), Positives = 39/119 (32%), Gaps = 4/119 (3%)
Query: 96 GDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPH 155
G+ P P P P S + +PPG P P PP +G P
Sbjct: 65 GNKPQGPPPPGKPQGPPPQG-DKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPP 123
Query: 156 PGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKG 214
PG+P P K R G+ P+ PP ++ Q P+ P G
Sbjct: 124 PGKPQGPPAQGGSKSQSARS-PPGK--PQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAG 179
Score = 32.7 bits (73), Expect = 1.4
Identities = 32/117 (27%), Positives = 38/117 (32%), Gaps = 19/117 (16%)
Query: 87 RGRKSRS--SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP------- 137
+G KSRS SP P P P N P PPG GPP+
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKP--QGPPAQGGSKSQS 140
Query: 138 ------LPGAPPQKGDEADVSSPHP--GEPNVPKGLADRKQNDQRKVSQGRLAPRPP 186
P PPQ+ P P G P P+ + + QG RPP
Sbjct: 141 ARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRPP 197
Score = 31.6 bits (70), Expect = 3.1
Identities = 54/219 (24%), Positives = 73/219 (33%), Gaps = 60/219 (27%)
Query: 135 PSPLPGAP----PQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEK 190
PS + G P PQ G++ P PG+P P QG P+ PP
Sbjct: 29 PSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPP-------------PQGGNKPQGPP--- 72
Query: 191 SKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEG 250
P P+G P + S SP+ P GK +G
Sbjct: 73 -----------------PPGKPQGPPPQGDKS-----RSPRSPP-----GKP------QG 99
Query: 251 SPLPRSPTQDAAGVGPPASQGRGPAGEPMGPEA--GSKAEL----PPTVSRPPLLRGLSW 304
P Q G QG P G+P GP A GSK++ P PP G +
Sbjct: 100 PPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNP 159
Query: 305 DSGPEEPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAKAP 343
P G Q+ A P + + GG+ ++ P
Sbjct: 160 QGPPPPAGGNPQQPQAP-PAGQPQGPPRPPQGGRPSRPP 197
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 50.8 bits (120), Expect = 5e-06
Identities = 58/195 (29%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 126 PGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAP 183
PG GPP P+ PG G+ SP P G A K + + G AP
Sbjct: 1010 PGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG--AP 1067
Query: 184 RPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES-ELGKQ 242
P S A + D + P G + + G P+ E+ E G++
Sbjct: 1068 GAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGER 1127
Query: 243 LLK-----TGWEGSPLPRSPTQDAAGVGPPASQG-RGPAGEPMGPEAGSKAELPPTVSRP 296
LK TG +G P P P+ D GP G RGP G P+GP A P P
Sbjct: 1128 GLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPG-PVGPSGKDGANGIPGPIGP 1186
Query: 297 PLLRGLSWDSGPEEP 311
P RG S ++GP P
Sbjct: 1187 PGPRGRSGETGPAGP 1201
Score = 46.6 bits (109), Expect = 9e-05
Identities = 61/238 (25%), Positives = 84/238 (35%), Gaps = 20/238 (8%)
Query: 86 RRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQK 145
++G S P V P + R S PPG D +G +
Sbjct: 1006 KQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKG-------DR 1058
Query: 146 GDEADVSSPH-PGEPNVPKGLADR-KQNDQRKV-SQGRLAPRPPPVEKSKEIAIEQKENF 202
G+ V +P PG P P KQ D+ + +QG + P P ++ I Q
Sbjct: 1059 GETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPA--GARGIQGPQGPRG 1116
Query: 203 DPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESE-LGKQLLKTGWEGSPLPRSPT-QD 260
D + E +GL +G L P PGP + +G G P P P+ +D
Sbjct: 1117 DKGEAGEPGERGLKGHRGFTGLQGLPGP-PGPSGDQGASGPAGPSGPRGPPGPVGPSGKD 1175
Query: 261 AAG-----VGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGP 313
A +GPP +GR P GP PP P + GP E GP
Sbjct: 1176 GANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGP 1233
Score = 43.9 bits (102), Expect = 6e-04
Identities = 67/244 (27%), Positives = 84/244 (34%), Gaps = 36/244 (14%)
Query: 87 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGA--- 141
+G + + A P PS +P +T P G GPP PGA
Sbjct: 848 KGEQGEAGQKGDAGAPGPQ-GPSGAPGPQGPTGVT--GPKGARGAQGPPGATGFPGAAGR 904
Query: 142 ---PPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQ 198
P G+ P P + PKG R G P PP EK E
Sbjct: 905 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKG-----EP 959
Query: 199 KENFDPLQYPETTPKGLAPVTNSSGKMALNSPQ-----PGPVESELGKQLLKTGWEGSPL 253
++ P+GLA G + PGP E GKQ G G+
Sbjct: 960 GDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP-SGEPGKQ----GAPGASG 1014
Query: 254 PRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSG----PE 309
R P VGPP GPAGEP G E A+ PP ++G ++G P
Sbjct: 1015 DRGP---PGPVGPPGL--TGPAGEP-GREGSPGADGPPGRDGAAGVKGDRGETGAVGAPG 1068
Query: 310 EPGP 313
PGP
Sbjct: 1069 APGP 1072
Score = 39.3 bits (90), Expect = 0.015
Identities = 65/259 (25%), Positives = 87/259 (33%), Gaps = 52/259 (20%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPL-----PGAPPQKGDEA 149
PG SA +P ++ + R PPG +GP P PG KG++
Sbjct: 416 PGAKGSAGAPGIAGAPGFPGPRG-------PPGPQGATGPLGPKGQTGEPGIAGFKGEQG 468
Query: 150 DVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPE 209
P P P G A + + G + P PP E
Sbjct: 469 PKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGE-------------------- 508
Query: 210 TTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPAS 269
+G G+ L P+ P E G G P+ D G P
Sbjct: 509 ---RGAPGNRGFPGQDGLAGPKGAPGE---------RGPSGLAGPKGANGDPGRPGEPGL 556
Query: 270 QG-RGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEE 328
G RG G P +AG + ++ P S P G GP+ G R Q + P +
Sbjct: 557 PGARGLTGRP--GDAGPQGKVGP--SGAPGEDGRPGPPGPQ--GARGQPGVMGFPGPKGA 610
Query: 329 KRFAGKAGGK-LAKAPGLK 346
GKAG K L APGL+
Sbjct: 611 NGEPGKAGEKGLPGAPGLR 629
Score = 38.1 bits (87), Expect = 0.033
Identities = 64/249 (25%), Positives = 82/249 (32%), Gaps = 37/249 (14%)
Query: 92 RSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV 151
R PG + A P R P P G GPP P PG + GD+
Sbjct: 629 RGLPGKDGETGAAGPPGPAGPAGERGEQ-GAPGPSGFQGLPGPPGP-PGEGGKPGDQGV- 685
Query: 152 SSPHPGEPNVPKGLADRKQND-----QRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 206
PGE P + R + +QG PR P + K P
Sbjct: 686 ----PGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD---GPKGASGPAG 738
Query: 207 YPETT-PKGLAPVTNSSGKMALNSP--------QPGPVESELGKQLLK--TGWEGSPLPR 255
P P GL + G + P + GP E GK + TG G P P
Sbjct: 739 PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGP-EGAPGKDGGRGLTGPIGPPGPA 797
Query: 256 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 309
+ VGPP G RG GE GP + PP P +G ++G +
Sbjct: 798 GANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK 857
Query: 310 ----EPGPR 314
PGP+
Sbjct: 858 GDAGAPGPQ 866
Score = 33.1 bits (74), Expect = 1.1
Identities = 50/224 (22%), Positives = 65/224 (29%), Gaps = 77/224 (34%)
Query: 123 PTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP----------------HPGEPNVP---- 162
P PG+ GP P PG P + GD+ + P PG P +P
Sbjct: 230 PGEPGVSGPMGPRGP-PGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKG 288
Query: 163 ----------------KGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 206
G+ + S G + PR P E+ +
Sbjct: 289 HRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGR-------------- 334
Query: 207 YPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGP 266
T P G A + G QPGP G P P P G
Sbjct: 335 ---TGPAGAAGARGNDG-------QPGPA--------------GPPGPVGPAGGPGFPGA 370
Query: 267 PASQGR-GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 309
P ++G GP G GPE P P G S + G +
Sbjct: 371 PGAKGEAGPTG-ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTD 413
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 50.8 bits (120), Expect = 5e-06
Identities = 58/195 (29%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 126 PGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAP 183
PG GPP P+ PG G+ SP P G A K + + G AP
Sbjct: 941 PGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVG--AP 998
Query: 184 RPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVES-ELGKQ 242
P S A + D + P G + + G P+ E+ E G++
Sbjct: 999 GAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAGEPGER 1058
Query: 243 LLK-----TGWEGSPLPRSPTQDAAGVGPPASQG-RGPAGEPMGPEAGSKAELPPTVSRP 296
LK TG +G P P P+ D GP G RGP G P+GP A P P
Sbjct: 1059 GLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPG-PVGPSGKDGANGIPGPIGP 1117
Query: 297 PLLRGLSWDSGPEEP 311
P RG S ++GP P
Sbjct: 1118 PGPRGRSGETGPAGP 1132
Score = 46.6 bits (109), Expect = 9e-05
Identities = 61/238 (25%), Positives = 84/238 (35%), Gaps = 20/238 (8%)
Query: 86 RRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQK 145
++G S P V P + R S PPG D +G +
Sbjct: 937 KQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKG-------DR 989
Query: 146 GDEADVSSPH-PGEPNVPKGLADR-KQNDQRKV-SQGRLAPRPPPVEKSKEIAIEQKENF 202
G+ V +P PG P P KQ D+ + +QG + P P ++ I Q
Sbjct: 990 GETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPSGPA--GARGIQGPQGPRG 1047
Query: 203 DPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESE-LGKQLLKTGWEGSPLPRSPT-QD 260
D + E +GL +G L P PGP + +G G P P P+ +D
Sbjct: 1048 DKGEAGEPGERGLKGHRGFTGLQGLPGP-PGPSGDQGASGPAGPSGPRGPPGPVGPSGKD 1106
Query: 261 AAG-----VGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGP 313
A +GPP +GR P GP PP P + GP E GP
Sbjct: 1107 GANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGP 1164
Score = 43.9 bits (102), Expect = 6e-04
Identities = 67/244 (27%), Positives = 84/244 (34%), Gaps = 36/244 (14%)
Query: 87 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSP--LPGA--- 141
+G + + A P PS +P +T P G GPP PGA
Sbjct: 779 KGEQGEAGQKGDAGAPGPQ-GPSGAPGPQGPTGVT--GPKGARGAQGPPGATGFPGAAGR 835
Query: 142 ---PPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQ 198
P G+ P P + PKG R G P PP EK E
Sbjct: 836 VGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGLQGPAGPPGEKG-----EP 890
Query: 199 KENFDPLQYPETTPKGLAPVTNSSGKMALNSPQ-----PGPVESELGKQLLKTGWEGSPL 253
++ P+GLA G + PGP E GKQ G G+
Sbjct: 891 GDDGPSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGP-SGEPGKQ----GAPGASG 945
Query: 254 PRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSG----PE 309
R P VGPP GPAGEP G E A+ PP ++G ++G P
Sbjct: 946 DRGP---PGPVGPPGL--TGPAGEP-GREGSPGADGPPGRDGAAGVKGDRGETGAVGAPG 999
Query: 310 EPGP 313
PGP
Sbjct: 1000 APGP 1003
Score = 39.3 bits (90), Expect = 0.015
Identities = 65/259 (25%), Positives = 87/259 (33%), Gaps = 52/259 (20%)
Query: 95 PGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPL-----PGAPPQKGDEA 149
PG SA +P ++ + R PPG +GP P PG KG++
Sbjct: 347 PGAKGSAGAPGIAGAPGFPGPRG-------PPGPQGATGPLGPKGQTGEPGIAGFKGEQG 399
Query: 150 DVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPE 209
P P P G A + + G + P PP E
Sbjct: 400 PKGEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGE-------------------- 439
Query: 210 TTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPAS 269
+G G+ L P+ P E G G P+ D G P
Sbjct: 440 ---RGAPGNRGFPGQDGLAGPKGAPGE---------RGPSGLAGPKGANGDPGRPGEPGL 487
Query: 270 QG-RGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQKVLAKLPLAEEE 328
G RG G P +AG + ++ P S P G GP+ G R Q + P +
Sbjct: 488 PGARGLTGRP--GDAGPQGKVGP--SGAPGEDGRPGPPGPQ--GARGQPGVMGFPGPKGA 541
Query: 329 KRFAGKAGGK-LAKAPGLK 346
GKAG K L APGL+
Sbjct: 542 NGEPGKAGEKGLPGAPGLR 560
Score = 38.1 bits (87), Expect = 0.033
Identities = 64/249 (25%), Positives = 82/249 (32%), Gaps = 37/249 (14%)
Query: 92 RSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV 151
R PG + A P R P P G GPP P PG + GD+
Sbjct: 560 RGLPGKDGETGAAGPPGPAGPAGERGEQ-GAPGPSGFQGLPGPPGP-PGEGGKPGDQGV- 616
Query: 152 SSPHPGEPNVPKGLADRKQND-----QRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 206
PGE P + R + +QG PR P + K P
Sbjct: 617 ----PGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTD---GPKGASGPAG 669
Query: 207 YPETT-PKGLAPVTNSSGKMALNSP--------QPGPVESELGKQLLK--TGWEGSPLPR 255
P P GL + G + P + GP E GK + TG G P P
Sbjct: 670 PPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGP-EGAPGKDGGRGLTGPIGPPGPA 728
Query: 256 SPTQDAAGVGPPASQG----RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 309
+ VGPP G RG GE GP + PP P +G ++G +
Sbjct: 729 GANGEKGEVGPPGPAGSAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQK 788
Query: 310 ----EPGPR 314
PGP+
Sbjct: 789 GDAGAPGPQ 797
Score = 33.1 bits (74), Expect = 1.1
Identities = 63/227 (27%), Positives = 82/227 (36%), Gaps = 21/227 (9%)
Query: 131 CSGPPSPLPGAPPQKGDEADVSS-PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVE 189
C G PG QKG+ D+ P P P+G A + + +G + P
Sbjct: 23 CQGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQ---GPRGDRGDKGEKGAPGP 79
Query: 190 KSKEIAIEQKENFDPLQYP-ETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQL-LKTG 247
+ ++ N P P P GL N + +MA G E G QL + G
Sbjct: 80 RGRDGEPGTPGNPGPPGPPGPPGPPGLG--GNFAAQMA-----GGFDEKAGGAQLGVMQG 132
Query: 248 WEGSPLPRSPTQDAAGVGPPASQGR-GPAGE-----PMGPEAGSKAELPPTVSRPPLLRG 301
G PR P A GP QG G GE PMGP P G
Sbjct: 133 PMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGDDGEAGKPG 192
Query: 302 LSWDSGPEEP-GPRLQKVLAKLPLAEEEKRFAGKAGGK-LAKAPGLK 346
+ + GP P G R LP + + + G G K A APG+K
Sbjct: 193 KAGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVK 239
Score = 33.1 bits (74), Expect = 1.1
Identities = 50/224 (22%), Positives = 65/224 (29%), Gaps = 77/224 (34%)
Query: 123 PTPPGLDVCSGPPSPLPGAPPQKGDEADVSSP----------------HPGEPNVP---- 162
P PG+ GP P PG P + GD+ + P PG P +P
Sbjct: 161 PGEPGVSGPMGPRGP-PGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKG 219
Query: 163 ----------------KGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 206
G+ + S G + PR P E+ +
Sbjct: 220 HRGYPGLDGAKGEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGR-------------- 265
Query: 207 YPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGP 266
T P G A + G QPGP G P P P G
Sbjct: 266 ---TGPAGAAGARGNDG-------QPGPA--------------GPPGPVGPAGGPGFPGA 301
Query: 267 PASQGR-GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPE 309
P ++G GP G GPE P P G S + G +
Sbjct: 302 PGAKGEAGPTG-ARGPEGAQGPRGEPGTPGSPGPAGASGNPGTD 344
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 50.4 bits (119), Expect = 6e-06
Identities = 66/246 (26%), Positives = 90/246 (36%), Gaps = 36/246 (14%)
Query: 94 SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSS 153
SP SP +P SP ASP S S + PP L + PP +P +PP + ++
Sbjct: 402 SPPPSPPVQAP-FSPPASPPVSPSATPPSQAPPSL---AAPPLQVPPSPPASPPMSPSAT 457
Query: 154 PHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVE--KSKEIAIEQKENFDPL----QY 207
P P P LA + Q A PP++ S + + F P
Sbjct: 458 P---PPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMS 514
Query: 208 PETTPKGLAPVTNSSGKMAL--------------NSPQPGPVESELGKQLLKTGWEGSPL 253
P TP AP ++ + + P PGP S G +L G P
Sbjct: 515 PLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPP 574
Query: 254 P--RSPTQDAAG---VGPPASQGRGP---AGEPMGPEAGSKAELPPTVSRPPLLRGLSWD 305
P RSP+ +G G +S P G GPE G+ A PP + +W
Sbjct: 575 PPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAAS-PPPDAELAACHPAAWS 633
Query: 306 SGPEEP 311
GP P
Sbjct: 634 RGPAPP 639
Score = 47.4 bits (111), Expect = 5e-05
Identities = 63/237 (26%), Positives = 86/237 (36%), Gaps = 20/237 (8%)
Query: 93 SSPGDSPSAVSPNL-SPSASPTSSRSNS-----LTVPTPPGLDVCSGPPSPLPGAPPQKG 146
S P PS + +L SP+ T S S L P P + PP P +PP
Sbjct: 317 SPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP 376
Query: 147 DEADVSSPHPGEPN---VPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENF- 202
+ +++P P PN V A V P PPV S + +
Sbjct: 377 PLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLA 436
Query: 203 -DPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDA 261
PLQ P + P P++ S A PQ P + QL K + P +P A
Sbjct: 437 APPLQVPPSPPAS-PPMSPS----ATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQA 491
Query: 262 AGVGPPASQGRGP----AGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPR 314
P + G+ P A PM P A + PP ++ P L S + P PR
Sbjct: 492 LPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 548
Score = 40.8 bits (94), Expect = 0.005
Identities = 61/248 (24%), Positives = 81/248 (32%), Gaps = 53/248 (21%)
Query: 99 PSAVSP---NLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPH 155
P V+P + +P+ P SS + L P+P S PPSP APP
Sbjct: 273 PPQVTPPRKDAAPALGPLSS--SPLATPSP------SAPPSP--SAPPSL-------QTL 315
Query: 156 PGEPNVPKGLADRKQNDQRKVSQGRLAPRPP-------PVEKSKEIAIEQKENFDPLQYP 208
P P P A + P PP P + +A+ PLQ P
Sbjct: 316 PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP------PLQAP 369
Query: 209 ETTPKG--LAPVTNSSGK----------MALNSPQPGPVESELGKQLLKTGWEGSPLPRS 256
+ P L+P+ S + A SP P P S P S
Sbjct: 370 PSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPS 429
Query: 257 PTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPRLQ 316
+ P PA PM P A + PP ++ PPL +P P+
Sbjct: 430 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLA--------KPPPQAP 481
Query: 317 KVLAKLPL 324
LA PL
Sbjct: 482 PALATPPL 489
Score = 33.9 bits (76), Expect = 0.63
Identities = 62/247 (25%), Positives = 87/247 (35%), Gaps = 40/247 (16%)
Query: 85 TRRGRKSRSSPGD-SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLD---------VCSGP 134
TR R S G+ +P A + + P +SP R++ T P P G V G
Sbjct: 80 TRTSRPPASGRGERAPPAKNTSPGPVSSP--GRASGTTRPGPLGQKGLRISAEETVARGK 137
Query: 135 PSPLPGAPP-QKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAP--RP-PPVEK 190
+ P G D S P PG P+ +A R + +V R AP RP PP E
Sbjct: 138 ATEAPKRSALSAGARRDTSGPTPGTPS--PAMARRSRAAGTEVGLPRPAPSARPRPPTEG 195
Query: 191 SKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELG--KQLLKTGW 248
++ E+ TT A S L P + S ++G
Sbjct: 196 PRKSVSSASEH-------STTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGP 248
Query: 249 EGSPLPRSPTQDA--------AGVGPPASQGRGPAGEPMGPEAGS-----KAELPPTVSR 295
PR+P + A P + R A +GP + S PP+ S
Sbjct: 249 SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSA 308
Query: 296 PPLLRGL 302
PP L+ L
Sbjct: 309 PPSLQTL 315
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 50.4 bits (119), Expect = 6e-06
Identities = 69/294 (23%), Positives = 94/294 (31%), Gaps = 21/294 (7%)
Query: 84 LTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPP 143
+TR G + S +P AV+P A TS+ P+ G P P PP
Sbjct: 1420 VTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPP 1479
Query: 144 QKGDEADVSSPHP--------GEPNVPKGLADRKQNDQRKVSQGR--LAPRPPPVEKSKE 193
A SSP G P +P + + S R +AP + K
Sbjct: 1480 APKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTP 1539
Query: 194 IAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPL 253
+ KE P +PK + A P E+ + + ++G+P
Sbjct: 1540 ATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPA----TPSSKEASSPPAVTPSTYKGAPS 1595
Query: 254 PRSPTQDAAGVGP-PASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPG 312
P+ A P P PA P PE G P P + S P P
Sbjct: 1596 PKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPA 1655
Query: 313 PRLQKVLAKLPLAEEEKRFAGKAGGKLAK----APGLKDFQIQVQPVRMQKLTK 362
K+ A +P A K K G K AP + I P R TK
Sbjct: 1656 SVTCKMGATVPQA--SKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTK 1707
Score = 50.1 bits (118), Expect = 8e-06
Identities = 61/241 (25%), Positives = 87/241 (36%), Gaps = 49/241 (20%)
Query: 97 DSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGA--PPQ----KGDEAD 150
DSPS + ++SP ++ S TP G S P SP+ + P +G +
Sbjct: 792 DSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGN--LSSPVSPVEASFLPENSLSFQGSKDS 849
Query: 151 VSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVE--KSKEIAIEQKENFDP---- 204
++ H P PKG AP P V K + + KE P
Sbjct: 850 PATTHSPTPPSPKG-----------------APTPSAVTPLSPKGVTLPPKETPTPSVVN 892
Query: 205 LQYPETTPKGLAP-------VTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSP 257
L +P+ P AP +T+SS K A +P P + + + G+P P +
Sbjct: 893 LPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPK-------GAPTPPAA 945
Query: 258 TQDAAGVGP----PASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGP 313
T + GP P PA P P+ G P PP S GP P P
Sbjct: 946 TPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSP 1005
Query: 314 R 314
+
Sbjct: 1006 K 1006
Score = 45.1 bits (105), Expect = 3e-04
Identities = 54/235 (22%), Positives = 74/235 (31%), Gaps = 28/235 (11%)
Query: 92 RSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV 151
+ SP +P + P+A+P S + + P P G P P P
Sbjct: 1020 KGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGA 1079
Query: 152 SSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPP---PVEKSKEIAIEQKENFDPLQYP 208
+P P PKG + AP PP P +A P +
Sbjct: 1080 PTPPAATPPSPKG--------GPATPSPKGAPMPPAATPPSPKGGLAT------PPHKGA 1125
Query: 209 ETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAA------ 262
TTP P + G +A P+ P K G P +PT AA
Sbjct: 1126 PTTPAATPP--SPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPK 1183
Query: 263 -GVGPPASQG--RGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPR 314
G+ P+ +G PA P P+ G P P S G P P+
Sbjct: 1184 GGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPK 1238
Score = 42.7 bits (99), Expect = 0.001
Identities = 65/237 (27%), Positives = 80/237 (33%), Gaps = 45/237 (18%)
Query: 98 SPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDV--CSGPPSPL--PGAPPQKGDEAD--- 150
+PS +P+A+P S + L P+P G + PPSP P PP KG
Sbjct: 1211 TPSPKGAPTTPAATPPSPK-GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAA 1269
Query: 151 ---------VSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKEN 201
+ PH G PN P + S + AP PP
Sbjct: 1270 TPPSLKGGLATPPHKGAPN-PAVVTPPSPKGGPATSPPKGAPTPPAATPP---------- 1318
Query: 202 FDPLQYPETTPKGLAP----VTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSP 257
P P T P AP VT S K P P S G + EG P
Sbjct: 1319 -SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP--SSKGGPTTPSSKEG------P 1369
Query: 258 TQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGPR 314
T AA P+ +G GPA P P+ G P P + LS P P R
Sbjct: 1370 TPPAA---TPSHKG-GPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTR 1422
Score = 40.8 bits (94), Expect = 0.005
Identities = 66/276 (23%), Positives = 89/276 (32%), Gaps = 52/276 (18%)
Query: 75 EAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSAS---PTSSRSNSL---TVPTP--- 125
EA + E L+ +G K + SP+ SP +P+ S P S + +L PTP
Sbjct: 832 EASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVV 891
Query: 126 -----------------PGLDVCSGPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADR 168
P L + S P P KG A SP P P
Sbjct: 892 NLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPA---SPSPKGAPTPPAATPP 948
Query: 169 KQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPET-TPKG-----LAPVTNSS 222
+ AP PP P P T +PKG A +
Sbjct: 949 SPKGGPATPSPKWAPTPPAATPP-----------SPKGGPATPSPKGAPTPPAATPPSPK 997
Query: 223 GKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGRGPAGEPM--G 280
G A SP+ P + K +P P+ + A PP+ +G PA P+ G
Sbjct: 998 GGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAAT-PPSPKG-SPAATPLPKG 1055
Query: 281 PEAGSKAELPPTVSRP--PLLRGLSWDSGPEEPGPR 314
A LP P P L+G P P+
Sbjct: 1056 APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPK 1091
Score = 34.7 bits (78), Expect = 0.37
Identities = 52/210 (24%), Positives = 75/210 (35%), Gaps = 16/210 (7%)
Query: 92 RSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADV 151
+ SPG P +P P+ +P S + T P PS G P +
Sbjct: 1321 KGSPGTPPPKGAPT-PPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHK 1379
Query: 152 SSPHPGEPNVPKGLA-DRKQNDQRKVSQGRLAPRPPPVEK-SKEIAIEQKENFDPLQYPE 209
P P+ +G A + D + L+P+ P ++E A + +
Sbjct: 1380 GGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKG-------D 1432
Query: 210 TTPKGLAPVTNSSGKMALNSPQPGP-VESELGKQLLKTGWEGSPL-PRSPTQDAAGVGP- 266
TP + PV+ A ++P+ GP S G L SP P +P Q A P
Sbjct: 1433 LTPPAVTPVSLKKAP-ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPK 1491
Query: 267 PASQGRGPAGEPMGPEA--GSKAELPPTVS 294
A P G P P S E+P T S
Sbjct: 1492 KAPATPAPMGAPTLPAVIPSSPKEVPATPS 1521
Score = 30.0 bits (66), Expect = 9.1
Identities = 51/222 (22%), Positives = 75/222 (33%), Gaps = 36/222 (16%)
Query: 94 SPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAP----------P 143
+P +P +P + SS ++ P P + GP S + AP
Sbjct: 1689 APESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKT 1748
Query: 144 QKGDEADVSSPHPGEPNVPK------GLADRKQNDQRKVSQGRLAPRPP---PVEKSKEI 194
KG +A S P P K A K + + + AP PP P+ S
Sbjct: 1749 AKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSPVP 1808
Query: 195 AIEQKENF---DPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGS 251
+ K+ F P E+ K LAP L P P+ + Q S
Sbjct: 1809 TLPPKQQFLPSSPGLVLESPSKPLAPADEDE---LLPLIPPEPISGGVPFQ--------S 1857
Query: 252 PLPRSPTQDAAGVGPPASQGRGPA---GEPMGPEAGSKAELP 290
L PT +AG+ P + P + G E+ S +P
Sbjct: 1858 VLVNMPTPKSAGIPVPTPSAKQPVTKNNKGSGTESDSDESVP 1899
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 49.7 bits (117), Expect = 1e-05
Identities = 69/234 (29%), Positives = 82/234 (35%), Gaps = 35/234 (14%)
Query: 125 PPGLDVCSGPPSPL--PGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLA 182
PPG +GPP P+ GAP KG A S+ PG P G A R G
Sbjct: 840 PPGPAGPAGPPGPIGNVGAPGAKG--ARGSAGPPGATGFP-GAAGRVGPPG---PSGNAG 893
Query: 183 PRPPPVEKSKEIAIEQKENFDPLQYP-ETTPKGLAPVTNSSGKMALNSPQPGPVESELGK 241
P PP KE + P P E P G G + P P
Sbjct: 894 PPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAP------- 946
Query: 242 QLLKTGWEGSPLPRSPTQDAAGVGPPASQGR-------GPAGEP--MGPEAGSKAELPPT 292
G+P P+ VG P +G GP+GEP GP S PP
Sbjct: 947 --------GTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPG 998
Query: 293 VSRPPLLRGLSWDSGPE-EPGPRLQKVLAKLPLAEEEKRFAGKAGGKLAK-APG 344
PP L G +SG E PG P A+ ++ G AG A APG
Sbjct: 999 PMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPG 1052
Score = 49.7 bits (117), Expect = 1e-05
Identities = 60/204 (29%), Positives = 76/204 (37%), Gaps = 31/204 (15%)
Query: 95 PGDSPSAVSPNLSPS----ASPTSSRSNSLTVPT-PPGLDVCSGPPSPLPGAPPQKGDEA 149
PG+S +P S SP + T P PPG G P P+ G + GD
Sbjct: 1009 PGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPV-GPAGKSGDRG 1067
Query: 150 DVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSK-----EIAIEQKENFDP 204
+ P P P G ++G P+ P +K + + I+ F
Sbjct: 1068 ETGPAGPAGPVGPVG------------ARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSG 1115
Query: 205 LQYPETTP--KGLAPVTNSSGKMALNSPQPGPVESELGKQLLK--TGWEGSPLPRSPTQD 260
LQ P P G + +SG P PG + GK L G G P PR T D
Sbjct: 1116 LQGPPGPPGSPGEQGPSGASGPAGPRGP-PGSAGAP-GKDGLNGLPGPIGPPGPRGRTGD 1173
Query: 261 AAGVGPPASQGRGPAGEPMGPEAG 284
A VGPP GP G P P AG
Sbjct: 1174 AGPVGPPGPP--GPPGPPGPPSAG 1195
Score = 43.9 bits (102), Expect = 6e-04
Identities = 72/250 (28%), Positives = 94/250 (37%), Gaps = 47/250 (18%)
Query: 126 PGLDVCSGPPSPL-----PGAPPQKGDEADVSSPHPGEPNVP--KGLA--------DRKQ 170
PG D +GP P PG KG + PGE +P KGL D K
Sbjct: 496 PGADGVAGPKGPAGERGSPGPAGPKGSPGEAG--RPGEAGLPGAKGLTGSPGSPGPDGKT 553
Query: 171 NDQRKVSQ-GRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNS 229
Q GR P PP + + + +P PKG A +G+ +
Sbjct: 554 GPPGPAGQDGRPGPPGPPGARGQA---------GVMGFPG--PKGAAGEPGKAGERGVPG 602
Query: 230 PQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQG----RGPAGEPMGPEAGS 285
P PG V GK + G +G P P P + GP S G GPAG P EAG
Sbjct: 603 P-PGAV-GPAGKDG-EAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPP--GEAGK 657
Query: 286 KAE--LPPTVSRPPLL-----RGLSWDSGPE-EPGPRLQKVLAKLPLAEEEKRFAGKAGG 337
E +P + P RG + G + PGP + P + K AG G
Sbjct: 658 PGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGA 717
Query: 338 KLAK-APGLK 346
++ APGL+
Sbjct: 718 PGSQGAPGLQ 727
Score = 43.9 bits (102), Expect = 6e-04
Identities = 62/234 (26%), Positives = 86/234 (36%), Gaps = 37/234 (15%)
Query: 99 PSAVSPNLSPSASPTSSRSNSLTVPT----PPGLDVCSGPPSPLPGAPPQKGDE-ADVSS 153
P S N P P + P P G GPP P PG +KG AD +
Sbjct: 885 PPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGP-PGPAGEKGSPGADGPA 943
Query: 154 PHPGEPNVPKGLADRK-------QNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQ 206
PG P P+G+A ++ Q +R G P P ++ A ++ P+
Sbjct: 944 GAPGTPG-PQGIAGQRGVVGLPGQRGERGFP-GLPGPSGEPGKQGPSGASGERGPPGPMG 1001
Query: 207 YPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGP 266
P GLA SG+ + P G +GSP + + GP
Sbjct: 1002 -----PPGLAGPPGESGREGAPGAEGSP------------GRDGSPGAKGDRGETGPAGP 1044
Query: 267 PASQGRGPAGEPMGP--EAGSKAELPPTVSRPPLLRGLSWDSGPEEP-GPRLQK 317
P + G A P+GP ++G + E P P+ G GP P GPR K
Sbjct: 1045 PGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPV--GPVGARGPAGPQGPRGDK 1096
Score = 39.7 bits (91), Expect = 0.011
Identities = 62/227 (27%), Positives = 77/227 (33%), Gaps = 44/227 (19%)
Query: 123 PTPPGLDVCSGPPSPL--PGAPPQKGDEADVSSP-HPGEPNVP-----------KGLADR 168
P PG SGP P PG P + GD+ + P PGE P GL
Sbjct: 205 PGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGM 264
Query: 169 KQN------DQRKVSQGRLAPRPPPVEKSKEIAIEQK-------ENFDPLQYPETTPKGL 215
K + D K G P+ P + A Q E P +G
Sbjct: 265 KGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGN 324
Query: 216 APVTNSSGKMALNSPQ-----PGPV--ESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPA 268
T ++G P PG V + E G Q G GS P+ + GPP
Sbjct: 325 DGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQ----GPRGSEGPQGVRGEP---GPPG 377
Query: 269 SQGR-GPAGEPM--GPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPG 312
G GPAG P G A P ++ P G SGP+ PG
Sbjct: 378 PAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPG 424
Score = 39.7 bits (91), Expect = 0.011
Identities = 60/241 (24%), Positives = 76/241 (31%), Gaps = 45/241 (18%)
Query: 87 RGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGP------------ 134
RG PG P + P A + + + P P G+ GP
Sbjct: 415 RGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGE 474
Query: 135 --PSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSK 192
P+ LPG P ++G P PKG A + S G P+ P E +
Sbjct: 475 PGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERG------SPGPAGPKGSPGEAGR 528
Query: 193 EIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSP 252
P + KGL S G P PGP + G G P
Sbjct: 529 -----------PGEAGLPGAKGLTGSPGSPGPDGKTGP-PGPAGQD--------GRPGPP 568
Query: 253 LPRSPTQDAAGVGPPASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPG 312
P A +G P +G AGEP G PP P G + GP PG
Sbjct: 569 GPPGARGQAGVMGFPGP--KGAAGEP-GKAGERGVPGPPGAVGPAGKDGEAGAQGP--PG 623
Query: 313 P 313
P
Sbjct: 624 P 624
Score = 38.9 bits (89), Expect = 0.020
Identities = 64/227 (28%), Positives = 76/227 (33%), Gaps = 42/227 (18%)
Query: 99 PSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPP--SPLPGAPPQKGDEADVSSPHP 156
P P+ P S S P P G +GPP S GAP +G P
Sbjct: 973 PGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGS--------P 1024
Query: 157 GEPNVPKGLADRKQNDQRKVSQGRLAPRPP----PVEKSKEIAIEQKENFDPLQYPETTP 212
G P DR + AP P P KS + ET P
Sbjct: 1025 GRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRG-------------ETGP 1071
Query: 213 KGLAPVTNSSGKMALNSPQ-PGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQG 271
G A G PQ P + E G+Q G G R + GPP S G
Sbjct: 1072 AGPAGPVGPVGARGPAGPQGPRGDKGETGEQ----GDRGIKGHRGFSGLQGPPGPPGSPG 1127
Query: 272 -RGPAGE--PMGPEAGSKAELPPTVSRPPLLRGLSWDSGP-EEPGPR 314
+GP+G P GP PP + P GL+ GP PGPR
Sbjct: 1128 EQGPSGASGPAGPRG------PPGSAGAPGKDGLNGLPGPIGPPGPR 1168
Score = 35.8 bits (81), Expect = 0.17
Identities = 60/228 (26%), Positives = 74/228 (32%), Gaps = 79/228 (34%)
Query: 122 VPTPPGLDVCSGPPSPLPGAPPQKGDEAD-------------VSSPHPGEPNVPKGLADR 168
+P PGL GPP P PG P G+ A +S P P P+ P+GL
Sbjct: 134 IPGQPGLPGPPGPPGP-PGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGL--- 189
Query: 169 KQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPLQYPETTPKGLAPVTNSSGKMALN 228
P PP P P G +SG M
Sbjct: 190 --------------PGPPGA---------------PGPQGFQGPPGEPGEPGASGPMGPR 220
Query: 229 SPQPGPV-----ESELGKQLLKTGWEGSPLPRSPTQDAAGVGPPASQGR----------- 272
P PGP + E GK + G G P P+ G P +G
Sbjct: 221 GP-PGPPGKNGDDGEAGKP-GRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKG 278
Query: 273 -----GPAGEPMGP-EAGSKAELPPTVSRPPLLRGLSWDSG-PEEPGP 313
GP GEP P E G+ ++ P RGL + G P PGP
Sbjct: 279 DAGPAGPKGEPGSPGENGAPGQMGP--------RGLPGERGRPGAPGP 318
Score = 35.8 bits (81), Expect = 0.17
Identities = 60/233 (25%), Positives = 78/233 (33%), Gaps = 43/233 (18%)
Query: 110 ASPTSSRSNSLTVPTP--PGLDVCSGPPSPLPGAPPQKGDEADVSSP----------HPG 157
A P R +P GL +GPP G P ++G D+ +P PG
Sbjct: 625 AGPAGERGEQGPAGSPGFQGLPGPAGPPGEA-GKPGEQGVPGDLGAPGPSGARGERGFPG 683
Query: 158 EPNV--------PKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEI-AIEQKENFDPLQYP 208
E V P+G ND K G AP P + + + + + L P
Sbjct: 684 ERGVQGPPGPAGPRGANGAPGNDGAKGDAG--APGAPGSQGAPGLQGMPGERGAAGLPGP 741
Query: 209 -----ETTPKGLAPVTNSSGKMALNSP--QPGPVESELGKQLLKTGWEGSPLPRSPTQDA 261
+ PKG G L P PGP + G +G P P
Sbjct: 742 KGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAP--------GDKGESGPSGPAGPT 793
Query: 262 AGVGPPASQGR-GPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWDSGPEEPGP 313
G P +G GP G P G A+ P P G D+GP PGP
Sbjct: 794 GARGAPGDRGEPGPPG-PAGFAGPPGADGQPGAKGEPGDAGAKGDAGP--PGP 843
Score = 31.6 bits (70), Expect = 3.1
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 21/110 (19%)
Query: 246 TGWEGSPLPRSPTQDAAGVGPPASQG----RGPAGEPMGPEAGSKAELPPTVSRPPLLRG 301
TG P P P+ GPP + G +GP GEP P A P PP G
Sbjct: 172 TGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASG----PMGPRGPPGPPG 227
Query: 302 LSWDSG-------PEE---PGPRLQKVL---AKLPLAEEEKRFAGKAGGK 338
+ D G P E PGP+ + L A LP + + F+G G K
Sbjct: 228 KNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAK 277
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 49.7 bits (117), Expect = 1e-05
Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 28/245 (11%)
Query: 73 LEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCS 132
L++A+L+ R T +R+ P S SP +P +PT S T P PP
Sbjct: 1821 LQQAQLMRRRMATMN---TRNVP--QQSLPSPTSAPPGTPTQQPSTPQT-PQPPA----Q 1870
Query: 133 GPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSK 192
PSP+ +P P P ++ K Q P P VE ++
Sbjct: 1871 PQPSPVSMSP--------AGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAAR 1922
Query: 193 EIAIE--QKENFDPLQYPETTPKGLAPVTNSSGKMA---LNSPQPGPVESELGKQLLKTG 247
+I E Q+++ + + P G + +MA LN P+P V + +
Sbjct: 1923 QIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQ 1982
Query: 248 WEGSPLPRSPTQDAAGVGPP--ASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWD 305
W+ +PLP+ Q G+ P + Q + P P + P+ + LLR L
Sbjct: 1983 WQQAPLPQQ--QPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQ-DLLRTLKSP 2039
Query: 306 SGPEE 310
S P++
Sbjct: 2040 SSPQQ 2044
Score = 43.9 bits (102), Expect = 6e-04
Identities = 37/149 (24%), Positives = 53/149 (35%), Gaps = 17/149 (11%)
Query: 99 PSAVSPNLSPSASPTSSRSN--SLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHP 156
P L P+ P S+ + SL TPPG+ PP P P + +P P
Sbjct: 808 PPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMT----PPQPAAPTQPSTPVSSSGQTPTP 863
Query: 157 GEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPL---QYPETTPK 213
+VP + + +Q ++ P+P + +A Q P P TP
Sbjct: 864 TPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPL 923
Query: 214 GLA--------PVTNSSGKMALNSPQPGP 234
A P +S NS QPGP
Sbjct: 924 SQAAASIDNRVPTPSSVASAETNSQQPGP 952
Score = 31.6 bits (70), Expect = 3.1
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 615 ALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTNGDPDCEASAPALTL 674
A ++ + P+ SS+ S S+ P P L E + +PD P
Sbjct: 927 AASIDNRVPTPSSVASAETNSQQPG-----PDVPVLEMKTETQAEDTEPD-----PG--- 973
Query: 675 SCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEEE 734
E E ++ M EE +G + KE D+ E++ E ++PE E +EE
Sbjct: 974 ----ESKGEPRSEMMEEDL-----QGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEE 1024
Query: 735 EK 736
E+
Sbjct: 1025 EE 1026
Score = 31.2 bits (69), Expect = 4.1
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 606 SVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTNGDPDC 665
+ A +P PG TP + P+ P+ S +G+ P ++P+ + T P
Sbjct: 824 TAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQ---TQSTPTV 880
Query: 666 EASAPA 671
+A+A A
Sbjct: 881 QAAAQA 886
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 49.7 bits (117), Expect = 1e-05
Identities = 59/245 (24%), Positives = 95/245 (38%), Gaps = 28/245 (11%)
Query: 73 LEEAKLVSERFLTRRGRKSRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCS 132
L++A+L+ R T +R+ P S SP +P +PT S T P PP
Sbjct: 1859 LQQAQLMRRRMATMN---TRNVP--QQSLPSPTSAPPGTPTQQPSTPQT-PQPPA----Q 1908
Query: 133 GPPSPLPGAPPQKGDEADVSSPHPGEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSK 192
PSP+ +P P P ++ K Q P P VE ++
Sbjct: 1909 PQPSPVSMSP--------AGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAAR 1960
Query: 193 EIAIE--QKENFDPLQYPETTPKGLAPVTNSSGKMA---LNSPQPGPVESELGKQLLKTG 247
+I E Q+++ + + P G + +MA LN P+P V + +
Sbjct: 1961 QIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQ 2020
Query: 248 WEGSPLPRSPTQDAAGVGPP--ASQGRGPAGEPMGPEAGSKAELPPTVSRPPLLRGLSWD 305
W+ +PLP+ Q G+ P + Q + P P + P+ + LLR L
Sbjct: 2021 WQQAPLPQQ--QPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQ-DLLRTLKSP 2077
Query: 306 SGPEE 310
S P++
Sbjct: 2078 SSPQQ 2082
Score = 43.9 bits (102), Expect = 6e-04
Identities = 37/149 (24%), Positives = 53/149 (35%), Gaps = 17/149 (11%)
Query: 99 PSAVSPNLSPSASPTSSRSN--SLTVPTPPGLDVCSGPPSPLPGAPPQKGDEADVSSPHP 156
P L P+ P S+ + SL TPPG+ PP P P + +P P
Sbjct: 846 PPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMT----PPQPAAPTQPSTPVSSSGQTPTP 901
Query: 157 GEPNVPKGLADRKQNDQRKVSQGRLAPRPPPVEKSKEIAIEQKENFDPL---QYPETTPK 213
+VP + + +Q ++ P+P + +A Q P P TP
Sbjct: 902 TPGSVPSATQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPL 961
Query: 214 GLA--------PVTNSSGKMALNSPQPGP 234
A P +S NS QPGP
Sbjct: 962 SQAAASIDNRVPTPSSVASAETNSQQPGP 990
Score = 31.6 bits (70), Expect = 3.1
Identities = 30/122 (24%), Positives = 49/122 (40%), Gaps = 22/122 (18%)
Query: 615 ALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTNGDPDCEASAPALTL 674
A ++ + P+ SS+ S S+ P P L E + +PD P
Sbjct: 965 AASIDNRVPTPSSVASAETNSQQPG-----PDVPVLEMKTETQAEDTEPD-----PG--- 1011
Query: 675 SCLEELSQETKARMEEEAYSKGFQEGLKKTKELQDLKEEEEEQKSESPEEPEEVEETEEE 734
E E ++ M EE +G + KE D+ E++ E ++PE E +EE
Sbjct: 1012 ----ESKGEPRSEMMEEDL-----QGASQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEE 1062
Query: 735 EK 736
E+
Sbjct: 1063 EE 1064
Score = 31.2 bits (69), Expect = 4.1
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 606 SVAVVPKFNALNLPGQTPSSSSIPSLPALSESPNGKGSLPVTSALPALLENGKTNGDPDC 665
+ A +P PG TP + P+ P+ S +G+ P ++P+ + T P
Sbjct: 862 TAAGMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQ---TQSTPTV 918
Query: 666 EASAPA 671
+A+A A
Sbjct: 919 QAAAQA 924
>gi|237757312 synaptojanin 1 isoform c [Homo sapiens]
Length = 1295
Score = 49.3 bits (116), Expect = 1e-05
Identities = 65/219 (29%), Positives = 86/219 (39%), Gaps = 25/219 (11%)
Query: 91 SRSSPGDSPSAVSPNLSPSASPTSSRSNSLTVPTPPGLDVCSGPPSPLPGAPPQKGDEAD 150
S S G SPS+ SP SP SPT S ++P P S PS PG P + D
Sbjct: 1034 SSSGLGTSPSS-SPRTSPCQSPTISEGPVPSLPIRP-----SRAPSRTPGPPSAQSSPID 1087
Query: 151 VSSPHPGEPNVP-KGLADRKQNDQRKVS-QGRLAP--RPPPVEKSKEIAIEQKENFDPLQ 206
P P + L ++ R V+ R AP RPPP ++ A +KE F +
Sbjct: 1088 AQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGARSPAPTRKE-FGAPK 1146
Query: 207 YPETTPKGLAPVTNSSGKMALNSPQPGPVESELGKQLLKTGWEGSPLPRSPTQDAAGVGP 266
P TT K + S + L PGP + + P+S + +AG
Sbjct: 1147 SPGTTRKDNIGRSQPSPQAGLAG--PGPAGYSTARPTIPPRAGVISAPQSHARASAGRLT 1204
Query: 267 PASQ--------GRGPAGEPMGPEAGSKAELPPTVSRPP 297
P SQ G EP+ P+A PP S PP
Sbjct: 1205 PESQSKTSETSKGSTFLPEPLKPQAA----FPPQSSLPP 1239
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.127 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,347,286
Number of Sequences: 37866
Number of extensions: 2328472
Number of successful extensions: 29848
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 432
Number of HSP's successfully gapped in prelim test: 1380
Number of HSP's that attempted gapping in prelim test: 16420
Number of HSP's gapped (non-prelim): 10170
length of query: 821
length of database: 18,247,518
effective HSP length: 111
effective length of query: 710
effective length of database: 14,044,392
effective search space: 9971518320
effective search space used: 9971518320
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.