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Search of human proteins with 148596994
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148596994 nuclear pore complex interacting protein [Homo
sapiens]
(350 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148596994 nuclear pore complex interacting protein [Homo sapi... 733 0.0
gi|193290184 hypothetical protein LOC339047 [Homo sapiens] 717 0.0
gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo sapi... 523 e-149
gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isofor... 514 e-146
gi|239745475 PREDICTED: similar to NPIP-like protein ENSP0000028... 457 e-129
gi|239745469 PREDICTED: nuclear pore complex interacting protein... 447 e-126
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens] 425 e-119
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho... 425 e-119
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch... 425 e-119
gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo ... 390 e-109
gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane d... 390 e-109
gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane d... 390 e-109
gi|239745482 PREDICTED: hypothetical protein [Homo sapiens] 360 e-100
gi|239745607 PREDICTED: nuclear pore complex interacting protein... 202 3e-52
gi|239745496 PREDICTED: hypothetical protein XP_002343477 [Homo ... 180 2e-45
gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo sap... 152 6e-37
gi|239745494 PREDICTED: similar to NPIP-like protein ENSP0000034... 151 7e-37
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 45 1e-04
gi|195947369 junction-mediating and regulatory protein [Homo sap... 42 0.001
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 40 0.002
gi|66932999 testis-specific protein kinase 1 [Homo sapiens] 40 0.004
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 40 0.004
gi|83367077 mucin 16 [Homo sapiens] 39 0.009
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 39 0.009
gi|153792074 proline rich 12 [Homo sapiens] 39 0.009
gi|221139926 NHS-like 1 [Homo sapiens] 38 0.012
gi|116284392 mucin 2 precursor [Homo sapiens] 38 0.015
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 38 0.015
gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo sap... 38 0.015
gi|163965366 nascent polypeptide-associated complex alpha subuni... 37 0.020
>gi|148596994 nuclear pore complex interacting protein [Homo
sapiens]
Length = 350
Score = 733 bits (1892), Expect = 0.0
Identities = 350/350 (100%), Positives = 350/350 (100%)
Query: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT 60
MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT
Sbjct: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT 60
Query: 61 SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAK 120
SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAK
Sbjct: 61 SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAK 120
Query: 121 IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT 180
IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT
Sbjct: 121 IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT 180
Query: 181 YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK 240
YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK
Sbjct: 181 YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK 240
Query: 241 NRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPS 300
NRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPS
Sbjct: 241 NRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPS 300
Query: 301 ADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLPFHPQRMIISRN 350
ADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLPFHPQRMIISRN
Sbjct: 301 ADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLPFHPQRMIISRN 350
>gi|193290184 hypothetical protein LOC339047 [Homo sapiens]
Length = 369
Score = 717 bits (1850), Expect = 0.0
Identities = 348/369 (94%), Positives = 348/369 (94%), Gaps = 19/369 (5%)
Query: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT 60
MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT
Sbjct: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT 60
Query: 61 SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAK 120
SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSN RRQEGIKIVLEDIFTLWRQVETKVRAK
Sbjct: 61 SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAK 120
Query: 121 IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT 180
IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT
Sbjct: 121 IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT 180
Query: 181 YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK 240
YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK
Sbjct: 181 YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK 240
Query: 241 NRMGHQPPPPTQQHSIIDNSLSLKTPS-------------------ECLLTPLPPSALPS 281
NRMGHQPPPPTQQHSIIDNSLSLKTPS ECLLTPLPPSALPS
Sbjct: 241 NRMGHQPPPPTQQHSIIDNSLSLKTPSECVLYPLPPSADDNLKTPPECLLTPLPPSALPS 300
Query: 282 ADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLPFH 341
ADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPS DDNLKTPPECVCSLPFH
Sbjct: 301 ADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSADDNLKTPPECVCSLPFH 360
Query: 342 PQRMIISRN 350
PQRMIISRN
Sbjct: 361 PQRMIISRN 369
>gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo
sapiens]
Length = 380
Score = 523 bits (1348), Expect = e-149
Identities = 267/348 (76%), Positives = 281/348 (80%), Gaps = 29/348 (8%)
Query: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT 60
MFCCLGYEWLSGGCKTWHSAWVINTLADH HRGTDFGGSPWL II F RSYK ++L T
Sbjct: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHHHRGTDFGGSPWLRIIIAFPRSYKVVLTLWT 60
Query: 61 SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAK 120
YL +SFLKTIF S+NGHD STDVQQRARRSNRRRQEG KI L+D+ TL R VETK RAK
Sbjct: 61 VYLWLSFLKTIFQSENGHDVSTDVQQRARRSNRRRQEGNKIGLKDVITLRRHVETKGRAK 120
Query: 121 IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT 180
IRKMKVTTK+N HDKINGKRKTAK+ +KLS+KE EH EKERQVSEAEENGKLDMKEIHT
Sbjct: 121 IRKMKVTTKINHHDKINGKRKTAKK--QKLSVKECEHAEKERQVSEAEENGKLDMKEIHT 178
Query: 181 YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK 240
YM+MFQRAQ LRRRAEDY++CKI PSARK LCN VRMAA EHRHSSGLPYWPYLTAETLK
Sbjct: 179 YMKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLK 238
Query: 241 NRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPS 300
NRMGHQPPPPTQQHSI DNSLSLKTP ECLLTPLP PSADDNLKTP ECLL PLPPS
Sbjct: 239 NRMGHQPPPPTQQHSITDNSLSLKTPPECLLTPLP----PSADDNLKTPPECLLTPLPPS 294
Query: 301 ADDNLKTPPECLLTPLPPSAPPSVDDNLKTPP----ECVCSLPFHPQR 344
A PPS DDNLKTPP E P P+R
Sbjct: 295 A-------------------PPSADDNLKTPPLATQEAEAEKPPKPKR 323
>gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isoform 3
[Homo sapiens]
Length = 363
Score = 514 bits (1325), Expect = e-146
Identities = 270/354 (76%), Positives = 281/354 (79%), Gaps = 21/354 (5%)
Query: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT 60
MFCCLGYEWLSGGCKTWHSAWVINTLADH H GT F GSPWL I F RSYK I L T
Sbjct: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHHHCGTGFRGSPWLHFIIAFPRSYKVFIILWT 60
Query: 61 SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAK 120
YL +S LKTI S+NGHDGSTDVQQRA RSNR RQEG KI L+D+ TLWR VETKVRAK
Sbjct: 61 VYLWMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQEGNKIGLKDVITLWRHVETKVRAK 120
Query: 121 IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT 180
IRK KVTTK+N HDKINGKRKTAK H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHT
Sbjct: 121 IRKRKVTTKINHHDKINGKRKTAKNHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHT 180
Query: 181 YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK 240
Y +MFQRAQ LRRRAEDY++ KI PSARKPLCN VRMAA EHRHSSGLPYWPYLTAETLK
Sbjct: 181 YKKMFQRAQELRRRAEDYHKRKIPPSARKPLCNWVRMAAAEHRHSSGLPYWPYLTAETLK 240
Query: 241 NRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLL-----Y 295
NRMG QPPPPT QHSI DNSLSLKTP ECLL PLP PS DDN+K EC L
Sbjct: 241 NRMGRQPPPPT-QHSITDNSLSLKTPPECLLRPLP----PSVDDNIK---ECPLAPLPPS 292
Query: 296 PLPPSADDNLKTPPECLLTPLPPS-APPSVDDNLKTPP----ECVCSLPFHPQR 344
PLPPS DDNLK ECLL PLPPS PPSVDDNLKTPP E P P+R
Sbjct: 293 PLPPSVDDNLK---ECLLAPLPPSPLPPSVDDNLKTPPLATQEAEAKKPPKPKR 343
>gi|239745475 PREDICTED: similar to NPIP-like protein
ENSP00000283050 isoform 1 [Homo sapiens]
Length = 385
Score = 457 bits (1176), Expect = e-129
Identities = 247/355 (69%), Positives = 260/355 (73%), Gaps = 58/355 (16%)
Query: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT 60
MFCCLGYEWLSGGCKTWHSAW RG T+F R +
Sbjct: 1 MFCCLGYEWLSGGCKTWHSAW---------RRG-----------FTMFARIVSIS----- 35
Query: 61 SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAK 120
VSFLKTIF S+NGHDGS DVQQRA RSNR RQ+G KI L+D+ TL R VETKVRAK
Sbjct: 36 ----VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAK 91
Query: 121 IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT 180
IRK KVTTK+NRHDKINGKRKTA++H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHT
Sbjct: 92 IRKRKVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHT 151
Query: 181 YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK 240
Y +MFQRAQ LRRRAEDY++CKI PSARKPLCN VRMAA EHRHSSGLPYW YLTAETLK
Sbjct: 152 YKKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHSSGLPYWLYLTAETLK 211
Query: 241 NRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSA-----------------LPSAD 283
NRMG QPPPPTQQHSI DNSLSLKTP ECLLTPLPPS PS D
Sbjct: 212 NRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVD 271
Query: 284 DNLKTPAECLLY-----PLPPSADDNLKTPPECLLTPLPPS-APPSVDDNLKTPP 332
DNLK ECL PLPPS DDNLK ECL PLPPS PPSVDDNLKTPP
Sbjct: 272 DNLK---ECLFVPLPPSPLPPSVDDNLK---ECLFVPLPPSPLPPSVDDNLKTPP 320
Score = 28.5 bits (62), Expect = 9.4
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Query: 315 PLPPSAPPSVDDN---LKTPPECV 335
P PP+ S+ DN LKTPPEC+
Sbjct: 218 PPPPTQQHSITDNSLSLKTPPECL 241
>gi|239745469 PREDICTED: nuclear pore complex interacting
protein-like 1 [Homo sapiens]
Length = 371
Score = 447 bits (1151), Expect = e-126
Identities = 241/355 (67%), Positives = 252/355 (70%), Gaps = 72/355 (20%)
Query: 1 MFCCLGYEWLSGGCKTWHSAWVINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCT 60
MFCCLGYEWLSGGCKTWHSAWV
Sbjct: 1 MFCCLGYEWLSGGCKTWHSAWV-------------------------------------- 22
Query: 61 SYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAK 120
SFLKTIF S+NGHDGS DVQQRA RSNR RQ+G KI L+D+ TL R VETKVRAK
Sbjct: 23 -----SFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAK 77
Query: 121 IRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHT 180
IRK KVTTK+NRHDKINGKRKTA++H+RKLSMKE EH EKERQVSEAEENGKLDMKEIHT
Sbjct: 78 IRKRKVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHT 137
Query: 181 YMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLK 240
Y +MFQRAQ LRRRAEDY++CKI PSARKPLCN VRMAA EH HSSGLPYW YLTAETLK
Sbjct: 138 YKKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHCHSSGLPYWLYLTAETLK 197
Query: 241 NRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSA-----------------LPSAD 283
NRMG QPPPPTQQHSI DNSLSLKTP ECLLTPLPPS PS D
Sbjct: 198 NRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECPLAPLPPSPLPPSVD 257
Query: 284 DNLKTPAECLLY-----PLPPSADDNLKTPPECLLTPLPPS-APPSVDDNLKTPP 332
DNLK ECL PLPPS DDNLK ECL PLPPS PPSVDDNLKTPP
Sbjct: 258 DNLK---ECLFVPLPPSPLPPSVDDNLK---ECLFVPLPPSPLPPSVDDNLKTPP 306
Score = 28.5 bits (62), Expect = 9.4
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Query: 315 PLPPSAPPSVDDN---LKTPPECV 335
P PP+ S+ DN LKTPPEC+
Sbjct: 204 PPPPTQQHSITDNSLSLKTPPECL 227
>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
Length = 1133
Score = 425 bits (1093), Expect = e-119
Identities = 229/356 (64%), Positives = 246/356 (69%), Gaps = 73/356 (20%)
Query: 22 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81
VINTLADH HRGTDFGGSPWL +I F SYK I+L YL VS LKTIF S+NGHDGS
Sbjct: 41 VINTLADHHHRGTDFGGSPWLHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGS 100
Query: 82 TDVQQRARRSNRRRQEGI-----------------KIVLEDIFTLWRQVETKVRAKIRKM 124
TDVQQRA RSNRRRQEG+ KI L+D+ TL R VETKVRAKIRK
Sbjct: 101 TDVQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKR 160
Query: 125 KVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEM 184
KVTTK+N HDKINGKRKTA++ +M
Sbjct: 161 KVTTKINHHDKINGKRKTARKQ------------------------------------KM 184
Query: 185 FQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLKNRMG 244
FQRAQ LRRRAEDY++CKI PSARK LCN VRMAA EHRHSSGLPYWPYLTAETLKNRMG
Sbjct: 185 FQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMG 244
Query: 245 HQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDN 304
HQPPPPTQQHSI DNSLSLKTP ECLLTPLP PSADDNLKTP EC+L PLPPSADDN
Sbjct: 245 HQPPPPTQQHSITDNSLSLKTPPECLLTPLP----PSADDNLKTPPECVLTPLPPSADDN 300
Query: 305 LKTPPECLLTPLPPSA---------------PPSVDDNLKTPPECVCSLPFHPQRM 345
LKTPPEC+LTPLPPSA PPS DDNLKTPPEC+ + P P +
Sbjct: 301 LKTPPECVLTPLPPSADDNLKTPPECLLTPLPPSADDNLKTPPECLLT-PLPPSAL 355
Score = 121 bits (303), Expect = 1e-27
Identities = 71/111 (63%), Positives = 75/111 (67%), Gaps = 11/111 (9%)
Query: 226 SGLPYWPYLTAETLKNR---MGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSA 282
S LP P + LK R + H PP S DN LKTPSE LTPLPPSA PSA
Sbjct: 353 SALPSAPPSADDNLKTRAECLLHPLPP-----SADDN---LKTPSERQLTPLPPSAPPSA 404
Query: 283 DDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPE 333
DDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAPPS DDN+KTP E
Sbjct: 405 DDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAE 455
Score = 118 bits (296), Expect = 7e-27
Identities = 74/128 (57%), Positives = 81/128 (63%), Gaps = 17/128 (13%)
Query: 216 RMAAVEHRHS-SGLPYWPYLTAET------LKNRMGHQ---PPPPTQQHSIIDNSLSLKT 265
RM H S S LP+ P L + L + G + P PP+ DN LKT
Sbjct: 832 RMIISRHLPSVSSLPFHPQLHPQQMIISRHLPSVCGERLRGPLPPSAD----DN---LKT 884
Query: 266 PSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVD 325
PSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAPPS D
Sbjct: 885 PSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSAD 944
Query: 326 DNLKTPPE 333
DN+KTP E
Sbjct: 945 DNIKTPAE 952
Score = 117 bits (294), Expect = 1e-26
Identities = 58/72 (80%), Positives = 61/72 (84%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAP 321
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAP
Sbjct: 426 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAP 485
Query: 322 PSVDDNLKTPPE 333
PS DDN+KTP E
Sbjct: 486 PSADDNIKTPAE 497
Score = 117 bits (294), Expect = 1e-26
Identities = 58/72 (80%), Positives = 61/72 (84%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAP 321
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAP
Sbjct: 923 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAP 982
Query: 322 PSVDDNLKTPPE 333
PS DDN+KTP E
Sbjct: 983 PSADDNIKTPAE 994
Score = 108 bits (271), Expect = 5e-24
Identities = 67/116 (57%), Positives = 70/116 (60%), Gaps = 31/116 (26%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSA- 320
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTP E LT LPPSA
Sbjct: 468 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTALPPSAD 527
Query: 321 --------------PPSVDDNLKTPPE-CVCSLP---------------FHPQRMI 346
PPS DDNLKTP E + LP FHPQRMI
Sbjct: 528 DNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAFHPQRMI 583
Score = 108 bits (270), Expect = 7e-24
Identities = 73/153 (47%), Positives = 79/153 (51%), Gaps = 52/153 (33%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTPLPPSA---------------LPSADDNLKTPAE 291
P PP+ S DN +KTP+E L PLPPSA PSADDN+KTPAE
Sbjct: 479 PLPPSAPPSADDN---IKTPAERLRGPLPPSADDNLKTPSERQLTALPPSADDNIKTPAE 535
Query: 292 CLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPP-----------ECVCSLPF 340
L PLPPSADDNLKTP E LTPLPPSAPPS DDN+KTP V SLPF
Sbjct: 536 RLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAFHPQRMISRHLPSVSSLPF 595
Query: 341 HPQR-----------------------MIISRN 350
HPQ MIISR+
Sbjct: 596 HPQLHPQQMIISRYLLSVCGFRFHHQPMIISRH 628
Score = 82.0 bits (201), Expect = 7e-16
Identities = 40/48 (83%), Positives = 42/48 (87%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPP 309
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTPP
Sbjct: 965 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPP 1012
>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
sapiens]
Length = 678
Score = 425 bits (1093), Expect = e-119
Identities = 229/356 (64%), Positives = 246/356 (69%), Gaps = 73/356 (20%)
Query: 22 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81
VINTLADH HRGTDFGGSPWL +I F SYK I+L YL VS LKTIF S+NGHDGS
Sbjct: 41 VINTLADHHHRGTDFGGSPWLHVIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGS 100
Query: 82 TDVQQRARRSNRRRQEGI-----------------KIVLEDIFTLWRQVETKVRAKIRKM 124
TDVQQRA RSNRRRQEG+ KI L+D+ TL R VETKVRAKIRK
Sbjct: 101 TDVQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKR 160
Query: 125 KVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEM 184
KVTTK+N HDKINGKRKTA++ +M
Sbjct: 161 KVTTKINHHDKINGKRKTARKQ------------------------------------KM 184
Query: 185 FQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLKNRMG 244
FQRAQ LRRRAEDY++CKI PSARK LCN VRMAA EHRHSSGLPYWPYLTAETLKNRMG
Sbjct: 185 FQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMG 244
Query: 245 HQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDN 304
HQPPPPTQQHSI DNSLSLKTP ECLLTPLP PSADDNLKTP EC+L PLPPSADDN
Sbjct: 245 HQPPPPTQQHSITDNSLSLKTPPECLLTPLP----PSADDNLKTPPECVLTPLPPSADDN 300
Query: 305 LKTPPECLLTPLPPSA---------------PPSVDDNLKTPPECVCSLPFHPQRM 345
LKTPPEC+LTPLPPSA PPS DDNLKTPPEC+ + P P +
Sbjct: 301 LKTPPECVLTPLPPSADDNLKTPPECLLTPLPPSADDNLKTPPECLLT-PLPPSAL 355
Score = 121 bits (303), Expect = 1e-27
Identities = 71/111 (63%), Positives = 75/111 (67%), Gaps = 11/111 (9%)
Query: 226 SGLPYWPYLTAETLKNR---MGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSA 282
S LP P + LK R + H PP S DN LKTPSE LTPLPPSA PSA
Sbjct: 353 SALPSAPPSADDNLKTRAECLLHPLPP-----SADDN---LKTPSERQLTPLPPSAPPSA 404
Query: 283 DDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPE 333
DDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAPPS DDN+KTP E
Sbjct: 405 DDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAE 455
Score = 117 bits (294), Expect = 1e-26
Identities = 58/72 (80%), Positives = 61/72 (84%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAP 321
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAP
Sbjct: 426 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAP 485
Query: 322 PSVDDNLKTPPE 333
PS DDN+KTP E
Sbjct: 486 PSADDNIKTPAE 497
Score = 117 bits (294), Expect = 1e-26
Identities = 58/72 (80%), Positives = 61/72 (84%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAP 321
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAP
Sbjct: 468 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAP 527
Query: 322 PSVDDNLKTPPE 333
PS DDN+KTP E
Sbjct: 528 PSADDNIKTPAE 539
Score = 82.0 bits (201), Expect = 7e-16
Identities = 40/48 (83%), Positives = 42/48 (87%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPP 309
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTPP
Sbjct: 510 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPP 557
>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
family member 2 [Homo sapiens]
Length = 1122
Score = 425 bits (1092), Expect = e-119
Identities = 228/335 (68%), Positives = 240/335 (71%), Gaps = 61/335 (18%)
Query: 22 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81
VINTLADH HRGTDFGGSPWL II F SYK I+L YL VS LKTIF S+NGHDGS
Sbjct: 41 VINTLADHHHRGTDFGGSPWLHIIIAFPTSYKVVITLWIVYLWVSLLKTIFWSRNGHDGS 100
Query: 82 TDVQQRARRSNRRRQEGI-----------------KIVLEDIFTLWRQVETKVRAKIRKM 124
TDVQQRA RSNRRRQEG+ KI L+D+ TL R VETKVRAKIRK
Sbjct: 101 TDVQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDVITLRRHVETKVRAKIRKR 160
Query: 125 KVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEM 184
KVTTK+NRHDKINGKRKTA++ +M
Sbjct: 161 KVTTKINRHDKINGKRKTARKQ------------------------------------KM 184
Query: 185 FQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLKNRMG 244
FQRAQ LRRRAEDY++CKI PSARK LCN VRMAA EHRHSSGLPYWPYLTAETLKNRMG
Sbjct: 185 FQRAQELRRRAEDYHKCKIPPSARKALCNWVRMAAAEHRHSSGLPYWPYLTAETLKNRMG 244
Query: 245 HQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDN 304
HQPPPPTQQH I DNSLSLKTP ECLLTPLP PSADDNLKTP ECLL PLPPSADDN
Sbjct: 245 HQPPPPTQQHCITDNSLSLKTPLECLLTPLP----PSADDNLKTPPECLLTPLPPSADDN 300
Query: 305 LKTPPECLLTPL----PPSAPPSVDDNLKTPPECV 335
LKTPPECLLTPL PPSAPPS DDNLKT EC+
Sbjct: 301 LKTPPECLLTPLPPSAPPSAPPSADDNLKTRAECL 335
Score = 129 bits (324), Expect = 4e-30
Identities = 67/89 (75%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAP 321
+LKTPSE LTPLPPSA PSADDN+KT AE L PLPPSADDNLKTP E LTPLPPSAP
Sbjct: 514 NLKTPSERQLTPLPPSAPPSADDNIKTTAEHLRGPLPPSADDNLKTPSERQLTPLPPSAP 573
Query: 322 PSVDDNLKTPPECVCSLPFHPQRMIISRN 350
PS DDN+KTP E + FHPQRMIISR+
Sbjct: 574 PSADDNIKTPAEHL-QFRFHPQRMIISRD 601
Score = 119 bits (297), Expect = 5e-27
Identities = 67/99 (67%), Positives = 71/99 (71%), Gaps = 12/99 (12%)
Query: 235 TAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLL 294
TAE L+ P PP+ DN LKTPSE LTPLPPSA PSADDN+KTPAE L
Sbjct: 373 TAERLRG-----PLPPSAD----DN---LKTPSERQLTPLPPSAPPSADDNIKTPAEHLR 420
Query: 295 YPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPE 333
PLPPSADDNLKTP E LTPLPPSAPPS DDN+KTP E
Sbjct: 421 GPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAE 459
Score = 117 bits (294), Expect = 1e-26
Identities = 58/72 (80%), Positives = 61/72 (84%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAP 321
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAP
Sbjct: 430 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAP 489
Query: 322 PSVDDNLKTPPE 333
PS DDN+KTP E
Sbjct: 490 PSADDNIKTPAE 501
Score = 117 bits (293), Expect = 2e-26
Identities = 66/102 (64%), Positives = 70/102 (68%), Gaps = 9/102 (8%)
Query: 232 PYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAE 291
P + E L G PP S DN LKTPS+ LTPLPPSA PSADDN+KTPAE
Sbjct: 878 PSVCGERLWRLRGPLPP------SADDN---LKTPSKRQLTPLPPSAPPSADDNIKTPAE 928
Query: 292 CLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPE 333
L PLPPSADDNLKTP E LTPLPPSAPPS DDN+KTP E
Sbjct: 929 RLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAE 970
Score = 115 bits (288), Expect = 6e-26
Identities = 69/111 (62%), Positives = 73/111 (65%), Gaps = 11/111 (9%)
Query: 226 SGLPYWPYLTAETLKNR---MGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSA 282
S P P + LK R + H PP S DN LKTPSE LTPLPPSA PSA
Sbjct: 315 SAPPSAPPSADDNLKTRAECLLHPLPP-----SADDN---LKTPSERQLTPLPPSAPPSA 366
Query: 283 DDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPE 333
DDN+KT AE L PLPPSADDNLKTP E LTPLPPSAPPS DDN+KTP E
Sbjct: 367 DDNIKTTAERLRGPLPPSADDNLKTPSERQLTPLPPSAPPSADDNIKTPAE 417
Score = 114 bits (286), Expect = 1e-25
Identities = 57/72 (79%), Positives = 60/72 (83%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAP 321
+LKTPSE LTPLPPSA PSADDN+KTPAE L PLPPSADDNLKTP E LTPLPPSAP
Sbjct: 941 NLKTPSERQLTPLPPSAPPSADDNIKTPAERLRGPLPPSADDNLKTPSERQLTPLPPSAP 1000
Query: 322 PSVDDNLKTPPE 333
S DDN+KTP E
Sbjct: 1001 TSADDNIKTPAE 1012
Score = 79.0 bits (193), Expect = 6e-15
Identities = 39/48 (81%), Positives = 41/48 (85%)
Query: 262 SLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPP 309
+LKTPSE LTPLPPSA SADDN+KTPAE L PLPPSADDNLKTPP
Sbjct: 983 NLKTPSERQLTPLPPSAPTSADDNIKTPAERLRGPLPPSADDNLKTPP 1030
Score = 67.8 bits (164), Expect = 1e-11
Identities = 50/116 (43%), Positives = 58/116 (50%), Gaps = 13/116 (11%)
Query: 235 TAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLL 294
TAE L+ P PP+ DN LKTPSE LTPLPPSA PSADDN+KTPAE L
Sbjct: 541 TAEHLRG-----PLPPSAD----DN---LKTPSERQLTPLPPSAPPSADDNIKTPAEHLQ 588
Query: 295 YPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLPFHPQRMIISRN 350
+ P + P P P P + +C FH QRMIISR+
Sbjct: 589 FRFHPQRMIISRDLPSVSSLPFHPQLHPQ-QMIISRYLLSICGFRFHRQRMIISRH 643
>gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo
sapiens]
Length = 317
Score = 390 bits (1003), Expect = e-109
Identities = 193/196 (98%), Positives = 194/196 (98%)
Query: 22 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81
VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS
Sbjct: 41 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
Query: 82 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 141
TDVQQRARRSN RRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK
Sbjct: 101 TDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 160
Query: 142 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 201
TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC
Sbjct: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
Query: 202 KITPSARKPLCNRVRM 217
KITPSARKPLCNRV +
Sbjct: 221 KITPSARKPLCNRVSL 236
>gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane
domain-containing protein FLJ00285 [Homo sapiens]
Length = 317
Score = 390 bits (1003), Expect = e-109
Identities = 193/196 (98%), Positives = 194/196 (98%)
Query: 22 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81
VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS
Sbjct: 41 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
Query: 82 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 141
TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKI KMKVTTKVNRHDKINGKRK
Sbjct: 101 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRK 160
Query: 142 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 201
TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC
Sbjct: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
Query: 202 KITPSARKPLCNRVRM 217
KITPSARKPLCNRV +
Sbjct: 221 KITPSARKPLCNRVSL 236
>gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane
domain-containing protein FLJ00285 [Homo sapiens]
Length = 317
Score = 390 bits (1003), Expect = e-109
Identities = 193/196 (98%), Positives = 194/196 (98%)
Query: 22 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 81
VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS
Sbjct: 41 VINTLADHRHRGTDFGGSPWLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGS 100
Query: 82 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRK 141
TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKI KMKVTTKVNRHDKINGKRK
Sbjct: 101 TDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICKMKVTTKVNRHDKINGKRK 160
Query: 142 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 201
TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC
Sbjct: 161 TAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRC 220
Query: 202 KITPSARKPLCNRVRM 217
KITPSARKPLCNRV +
Sbjct: 221 KITPSARKPLCNRVSL 236
>gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 449
Score = 360 bits (925), Expect = e-100
Identities = 215/369 (58%), Positives = 230/369 (62%), Gaps = 100/369 (27%)
Query: 22 VINTLADHRHRGTDFG-------------GSPW-----LLIITVFLRSYKFAISLCTSYL 63
VIN+LA +RHR TDFG SP ++II FLR Y F I CTS L
Sbjct: 58 VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCL 117
Query: 64 CVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI-----------------KIVLEDI 106
CVSFLKTIF S+NGHDGS DVQQRA RSNR RQ+G+ KI L+D+
Sbjct: 118 CVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV 177
Query: 107 FTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSE 166
TL R VETKVRAKIRK KVTTK+NRHDKINGKRKTA++
Sbjct: 178 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ-------------------- 217
Query: 167 AEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSS 226
+MFQRAQ LRRRAEDY++CKI PSARKPLCN VRMAA EHRHSS
Sbjct: 218 ----------------KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRMAAAEHRHSS 261
Query: 227 GLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSA-------- 278
GLPYW YLTAETLKNRMG QPPPPTQQHSI DNSLSLKTP ECLLTPLPPS
Sbjct: 262 GLPYWLYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPPSVDDNIKECP 321
Query: 279 ---------LPSADDNLKTPAECLLY-----PLPPSADDNLKTPPECLLTPLPPS-APPS 323
PS DDNLK ECL PLPPS DDNLK ECL PLPPS PPS
Sbjct: 322 LAPLPPSPLPPSVDDNLK---ECLFVPLPPSPLPPSVDDNLK---ECLFVPLPPSPLPPS 375
Query: 324 VDDNLKTPP 332
VDDNLKTPP
Sbjct: 376 VDDNLKTPP 384
Score = 28.5 bits (62), Expect = 9.4
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 3/24 (12%)
Query: 315 PLPPSAPPSVDDN---LKTPPECV 335
P PP+ S+ DN LKTPPEC+
Sbjct: 282 PPPPTQQHSITDNSLSLKTPPECL 305
>gi|239745607 PREDICTED: nuclear pore complex interacting
protein-like 2 [Homo sapiens]
Length = 265
Score = 202 bits (515), Expect = 3e-52
Identities = 125/235 (53%), Positives = 141/235 (60%), Gaps = 57/235 (24%)
Query: 9 WLSGGCKTWHSAWVINTLADHRHRGTDFG-------------GSPW-----LLIITVFLR 50
WL G + VIN+LA +RHR TDFG SP ++II FLR
Sbjct: 10 WLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLR 69
Query: 51 SYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLW 110
F I CTSYLCVSFLKTIF S+NGHDGSTDVQQRA RSNR RQ+G KI L+D+ TL
Sbjct: 70 RDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLR 129
Query: 111 RQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEEN 170
R VETKVRAKIRK KVTTK+NRHDKINGKRKTA++
Sbjct: 130 RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK------------------------- 164
Query: 171 GKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRM---AAVEH 222
+MFQRAQ LRRRAEDY++CKI PSARKPLCN V + A EH
Sbjct: 165 -----------QKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEH 208
>gi|239745496 PREDICTED: hypothetical protein XP_002343477 [Homo
sapiens]
Length = 218
Score = 180 bits (456), Expect = 2e-45
Identities = 102/155 (65%), Positives = 103/155 (66%), Gaps = 33/155 (21%)
Query: 217 MAAVEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPP 276
MAA EHRHSSGLPYWPYLTAETLKNRMG QPPPPTQQHSI DNSLSLKTP ECLLTPLPP
Sbjct: 1 MAAAEHRHSSGLPYWPYLTAETLKNRMGRQPPPPTQQHSITDNSLSLKTPPECLLTPLPP 60
Query: 277 SA-----------------LPSADDNLKTPAECLLY-----PLPPSADDNLKTPPECLLT 314
SA PS DDNLK ECL PLPPS DDNLK ECL
Sbjct: 61 SADDNIKECPLAPLPPSPLPPSVDDNLK---ECLFVPLPPSPLPPSVDDNLK---ECLFV 114
Query: 315 PLPPS-APPSVDDNLKTPP----ECVCSLPFHPQR 344
PLPPS PPSVDDNLKTPP E P P+R
Sbjct: 115 PLPPSPLPPSVDDNLKTPPLATQEAEAEKPPKPKR 149
>gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo
sapiens]
Length = 224
Score = 152 bits (383), Expect = 6e-37
Identities = 93/194 (47%), Positives = 108/194 (55%), Gaps = 56/194 (28%)
Query: 41 WLLIITVFLRSYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI- 99
W+L +F +F C +C+S LKTI S+NGHDGSTDVQQRA RSNR RQ+G+
Sbjct: 5 WMLFWLLFGLLLEFISHQC---ICMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQKGLR 61
Query: 100 ----------------KIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTA 143
KI L+D+ TLWR VETKVRAKIRK KVTTK+N HDKINGKRKTA
Sbjct: 62 SICMHTKKRVSSFPGNKIGLKDVITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRKTA 121
Query: 144 KEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKI 203
K +MFQR Q L RRAEDY++ KI
Sbjct: 122 KN------------------------------------QKMFQRVQELWRRAEDYHKRKI 145
Query: 204 TPSARKPLCNRVRM 217
PSARKPLCN V +
Sbjct: 146 PPSARKPLCNWVSL 159
>gi|239745494 PREDICTED: similar to NPIP-like protein
ENSP00000346774 [Homo sapiens]
Length = 221
Score = 151 bits (382), Expect = 7e-37
Identities = 93/178 (52%), Positives = 105/178 (58%), Gaps = 56/178 (31%)
Query: 65 VSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGI-----------------KIVLEDIF 107
VS LKTIF S+NGHDGSTDVQQRA RSNR RQ+G+ KI L+D+
Sbjct: 23 VSLLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVI 82
Query: 108 TLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEA 167
TL R VETKVRAKIRK KVTTK+NRHDKINGKRKTA++
Sbjct: 83 TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK---------------------- 120
Query: 168 EENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRM---AAVEH 222
+MFQRAQ LRRRAEDY++CKI PSARK LCN V + A EH
Sbjct: 121 --------------QKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVSLFVFLAFEH 164
>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
Length = 1989
Score = 45.1 bits (105), Expect = 1e-04
Identities = 58/222 (26%), Positives = 90/222 (40%), Gaps = 29/222 (13%)
Query: 115 TKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKE----REHGEKERQVSEAEEN 170
TK + +K+K +TK + K++ TAK+ LRK K ++ E+ERQ E ++
Sbjct: 402 TKTKTVQQKVKTSTKTHSAKKVS---TTAKQALRKQQTKAWKKLQQQKEQERQ-KEEDQR 457
Query: 171 GKLDMKEIHTYMEMFQRAQALRRRAEDYYR-CKITPSARKPLCNR----VRMAAVEHRHS 225
+ + +E E ++ + L + E Y R K+ R+ +R + +
Sbjct: 458 KQAEEEERRKREEEIRKIRDLSNQEEQYNRFMKLVGGKRRSRSKSSDPDLRRSLDKQPTD 517
Query: 226 SGLPYWPYLTAETL----KNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPP--SAL 279
SG + Y E + + P P Q + SL +P+ L P PP S+L
Sbjct: 518 SGGGIYQYDNYEEVAMDTDSETSSPAPSPVQPPFFSECSLGYFSPAPSLSLPPPPQVSSL 577
Query: 280 PSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAP 321
P L PLPP PP L PLPP P
Sbjct: 578 PPLSQPYVEGLCVSLEPLPP-------LPP---LPPLPPEDP 609
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 41.6 bits (96), Expect = 0.001
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 125 KVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEM 184
K K+ + +I + +T H +L +E+ H E+ER+ + + + + + T+ +
Sbjct: 633 KHNEKIQQRTRIEDEYRT--HHTVQLK-REKLHDEEERKSAWVSQERQRTLDRLRTFKQR 689
Query: 185 FQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSGLPYWPYL---TAETLKN 241
+ L+ R ++ + RK + V ++ H LP + T E +
Sbjct: 690 YPGQVILKST-----RLRLAHARRKGAASPV----LQEDHCDSLPSVLQVEEKTEEVGEG 740
Query: 242 RMGHQPPPPTQQHSII---DNSLS----LKTPSECLLTPLPPS-ALPSADDNLKTPAECL 293
R+ P T+ S++ D SL+ P + + LPP+ +LP ++NL+ P
Sbjct: 741 RVKRGPSQTTEPQSLVQLEDTSLTQLEATSLPLSGVTSELPPTISLPLLNNNLE-PCSVT 799
Query: 294 LYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKT 330
+ PLP PP P PP P + D +T
Sbjct: 800 INPLPSPLPPTPPPPPPPPPPPPPPPLPVAKDSGPET 836
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 40.4 bits (93), Expect = 0.002
Identities = 51/199 (25%), Positives = 72/199 (36%), Gaps = 51/199 (25%)
Query: 168 EENGKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRMAAVEHRHSSG 227
+ NG++ + H+ + Q AQ R AE T +KP A+ + H
Sbjct: 464 QPNGQIP-QATHSVSAVLQEAQ---RHAE-------TSKDKKP--------ALGNHHDPA 504
Query: 228 LPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLS------------LKTPSECLLTPLP 275
+P P+ +L PPPP ++ S S + L P + L P P
Sbjct: 505 VPRAPHAPKSSLP------PPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPP 558
Query: 276 PSA------LPSADDNLKTPAECLLYPLPPS----ADDNLKTPPECLLTPLPPSAPPSVD 325
P LP + P + P PPS A L PP P P AP V
Sbjct: 559 PPPPLDDPELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPPP----PPPAPAPAPVP 614
Query: 326 DNLKTPPECVCSLPFHPQR 344
D+ + PP P P+R
Sbjct: 615 DSARPPPAVAKRPPVPPKR 633
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/81 (25%), Positives = 26/81 (32%), Gaps = 3/81 (3%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLK 306
PPPP + P + P PPS A L P P P D+ +
Sbjct: 559 PPPPLDDPELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPPPPPPPAPAPAPVPDSAR 618
Query: 307 TPPECLLTPLPPSAPPSVDDN 327
PP P PP +N
Sbjct: 619 PPP---AVAKRPPVPPKRQEN 636
>gi|66932999 testis-specific protein kinase 1 [Homo sapiens]
Length = 626
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 263 LKTPSECLLTPLPPSALPSADDNLKTPAECLLYP-LPPSADDNLKTPPEC---LLTPLPP 318
L TPS+ +L +PPS PS L T E L+ P P +L + PE + T LP
Sbjct: 395 LDTPSKPVLPLVPPSPFPSTQLPLVTTPETLVQPGTPARRCRSLPSSPELPRRMETALPG 454
Query: 319 SAPPSVDDNLKTPPECVCSLP 339
PP+V + + EC S P
Sbjct: 455 PGPPAVGPSAEEKMECEGSSP 475
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 39.7 bits (91), Expect = 0.004
Identities = 33/92 (35%), Positives = 42/92 (45%), Gaps = 18/92 (19%)
Query: 247 PPPPTQQHSIID-NSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLY---------- 295
P PP+ I D N LS+ S +L P+P SA PS L PA L
Sbjct: 260 PAPPSVPTLISDSNPLSV---SASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPLAL 316
Query: 296 ---PLPPSADDNLKTP-PECLLTPLPPSAPPS 323
P+PPSA + P P +L P+P S PP+
Sbjct: 317 IQAPVPPSAPTLVLAPVPTPVLAPMPASTPPA 348
Score = 33.1 bits (74), Expect = 0.38
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 21/109 (19%)
Query: 247 PPPP---TQQHSIIDN-SLSLKTPSECLLTPLPPSALPSADDNLKTPAEC-------LLY 295
PP P + HS+ D + L P+ P+P S L PA L
Sbjct: 205 PPAPGSASVPHSVPDAFQVPLSVPA-----PVPHSGLVPVQVATSVPAPSPPLAPVPALA 259
Query: 296 PLPPS-----ADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLP 339
P PPS +D N + +L P+P SAPPS L P S+P
Sbjct: 260 PAPPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVP 308
Score = 32.0 bits (71), Expect = 0.85
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 22/116 (18%)
Query: 246 QPPPPTQQHSIIDNSLSLKTPSECLLTPLP-------------PSALPSADDNLKTPAEC 292
QP P + D SL + ++ L TP P P+ +PS +
Sbjct: 538 QPAPDGVPGPLADTSL-VTASAKVLPTPQPLLPAPSGSSAPPHPAKMPSGTEQQTEGTSV 596
Query: 293 LLYPL--PPSADDNLKTPPECLLTPLPPSAPPS-----VDDNLKTPPECVCSLPFH 341
PL PP + + +PPEC PL S+ + + + KTPP V + P H
Sbjct: 597 TFSPLKSPPQLEREMASPPECSEMPLDLSSKSNRQKLPLPNQRKTPPMPVLT-PVH 651
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 38.5 bits (88), Expect = 0.009
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 224 HSSGLPYWPYLTAETLKNR----MGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSAL 279
HS+ +P+ TL +R M Q P + S + + LSL + P S L
Sbjct: 7059 HSTLTQRFPHSEMTTLMSRGPGDMSWQSSPSLENPSSLPSLLSLPATTS---PPPISSTL 7115
Query: 280 PSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLP 339
P + P LL P + D L T PE L+T PP + D+ L T + +
Sbjct: 7116 PVTISSSPLPVTSLLTSSPVTTTDMLHTSPE-LVTSSPPKLSHTSDERLTTGKDTTNTEA 7174
Query: 340 FHPQRMIISRN 350
HP + N
Sbjct: 7175 VHPSTNTAASN 7185
Score = 33.5 bits (75), Expect = 0.29
Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 9/131 (6%)
Query: 224 HSSGLPYWPYLTAETLKNR----MGHQPPPPTQQHSIIDNSLSLKTPSECLLTPLPPSAL 279
HS +P+ T+ N+ + PP ++ S + + PS + +P S L
Sbjct: 6765 HSMATQEFPHSEMTTVMNKDPEILSWTIPPSIEKTSFSSSLM----PSPAMTSPPVSSTL 6820
Query: 280 PSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLP 339
P +P LL P D L T PE T PP+ + + L T +
Sbjct: 6821 PKTIHTTPSPMTSLLTPSLVMTTDTLGTSPE-PTTSSPPNLSSTSHEILTTDEDTTAIEA 6879
Query: 340 FHPQRMIISRN 350
HP + N
Sbjct: 6880 MHPSTSTAATN 6890
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 38.5 bits (88), Expect = 0.009
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 264 KTPSECLLTPLPPSA----LPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPS 319
+TPS LLT +PPSA +PS P+ LL + +A +TPP T PP
Sbjct: 575 RTPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDSTASIT-RTPPRASPTETPPR 633
Query: 320 APPSVDDNLKTPP 332
A P+ TPP
Sbjct: 634 ASPT-----GTPP 641
Score = 33.5 bits (75), Expect = 0.29
Identities = 36/120 (30%), Positives = 48/120 (40%), Gaps = 23/120 (19%)
Query: 204 TPSARKPLCNRVRMAAVEHRHSSGLPYWPYLTAETLKNRMGHQPPPPTQQHSIIDNSLSL 263
TPS R L A++ S P W TA PT S +L++
Sbjct: 496 TPS-RASLTKMESTASITRTPSRASPTWTPSTAS------------PTGSPS---TALAM 539
Query: 264 KTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPS 323
+PS LT P A + +TP+ L PS +TP LLT +PPSA P+
Sbjct: 540 GSPSRAALTRTPSRASLT-----RTPSRASL--TTPSRASLTRTPSTVLLTRMPPSASPT 592
Score = 30.4 bits (67), Expect = 2.5
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 6/84 (7%)
Query: 248 PPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKT 307
P T + ++L K S +T PP A P+ +TP PP A T
Sbjct: 595 PSRTSPTGMPSSALLTKMDSTASITRTPPRASPT-----ETPPRASPTGTPPRASPT-GT 648
Query: 308 PPECLLTPLPPSAPPSVDDNLKTP 331
PP T PP A P+ + +P
Sbjct: 649 PPRASPTGTPPRASPTGTPSRASP 672
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 38.5 bits (88), Expect = 0.009
Identities = 27/77 (35%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 266 PSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVD 325
P+ + P P LPSA+ N TP LL PP TP P PP PP
Sbjct: 1426 PAAAVPGPPPLPGLPSANSN-GTPEPPLLEEKPPPTPPPAPTPQ-----PQPPPPPPPPQ 1479
Query: 326 DNLKTPPECVCSLPFHP 342
L +PP V P P
Sbjct: 1480 PALPSPPPLVAPTPSSP 1496
Score = 33.9 bits (76), Expect = 0.22
Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 16/104 (15%)
Query: 248 PPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKT 307
PPP + ++ S TP LL PP P A P P PP L +
Sbjct: 1433 PPPLPG---LPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP-----PPPPPPQPALPS 1484
Query: 308 PPECLLT--------PLPPSAPPSVDDNLKTPPECVCSLPFHPQ 343
PP + PLPP PP++ PP L P+
Sbjct: 1485 PPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPE 1528
Score = 33.5 bits (75), Expect = 0.29
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 17/86 (19%)
Query: 247 PPPPTQQ------HSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECL----LYP 296
PPPPT Q H ++ + P +L P PP LPS + +P+ ++
Sbjct: 766 PPPPTAQSTQPTPHGLLLEAGGPDLP--LVLPPPPPQLLPSVLSHAPSPSPSASKVGVHL 823
Query: 297 LPPSADDNLKTPPECLLTPLPPSAPP 322
L P+ D PP P PP PP
Sbjct: 824 LEPATRDGAPQPP-----PPPPPPPP 844
Score = 32.7 bits (73), Expect = 0.50
Identities = 26/87 (29%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLK 306
P PP + TP P PP P L +P L+ P P S
Sbjct: 1448 PEPPLLEEKPPPTPPPAPTPQ-----PQPPPPPPPPQPALPSPPP-LVAPTPSSPPPPPL 1501
Query: 307 TPPECLLTPLPPSAPPSVDDNLKTPPE 333
PP P PP PP L PPE
Sbjct: 1502 PPPPPPAMPSPPPPPPPAAAPLAAPPE 1528
Score = 28.5 bits (62), Expect = 9.4
Identities = 29/98 (29%), Positives = 35/98 (35%), Gaps = 21/98 (21%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLK-TPAECLLYPLPPSADDNL 305
PP PT Q P P P ALPS + TP+ PLPP
Sbjct: 1462 PPAPTPQ------------PQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP----- 1504
Query: 306 KTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLPFHPQ 343
PP + +P PP PP+ P E P P+
Sbjct: 1505 --PPPAMPSP-PPPPPPAAAPLAAPPEEPAAPSPEDPE 1539
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 38.1 bits (87), Expect = 0.012
Identities = 27/79 (34%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALP---SADDNLKTPAECLLYPLPPSADD 303
PPPP + D S P + P PP AL S D +P L P+ P +
Sbjct: 952 PPPP-----VTDCSQGSPLPHSPVFPPPPPEALIPFCSPPDWCLSPPRPALSPILPDSPV 1006
Query: 304 NLKTPPECLLTPLPPSAPP 322
+L PP L + PP APP
Sbjct: 1007 SLPLPPPLLPSSEPPPAPP 1025
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 37.7 bits (86), Expect = 0.015
Identities = 29/91 (31%), Positives = 34/91 (37%), Gaps = 10/91 (10%)
Query: 247 PPPPTQQHSIIDNSLS---LKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADD 303
PPP T I + + TPS TP PP+ PS T P PP+
Sbjct: 1448 PPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTT-- 1505
Query: 304 NLKTP--PECLLTPLPPSAPPSVDDNLKTPP 332
TP P T LPP+ PS T P
Sbjct: 1506 ---TPITPPASTTTLPPTTTPSPPTTTTTTP 1533
Score = 35.8 bits (81), Expect = 0.059
Identities = 24/92 (26%), Positives = 32/92 (34%), Gaps = 11/92 (11%)
Query: 248 PPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKT 307
PPPT S S TP PP+ + TP+ + PS+
Sbjct: 1675 PPPTTTPS-----------SPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSP 1723
Query: 308 PPECLLTPLPPSAPPSVDDNLKTPPECVCSLP 339
PP + TP P + P + T P S P
Sbjct: 1724 PPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSP 1755
Score = 34.7 bits (78), Expect = 0.13
Identities = 28/98 (28%), Positives = 37/98 (37%), Gaps = 6/98 (6%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLK 306
P PPT + + + P TP PP+ PS + T P PP+ +
Sbjct: 1422 PSPPTTTTTTPPPTTTPSPPITTTTTP-PPTTTPSPPISTTTTPPPTTTPSPPTTTPSPP 1480
Query: 307 T----PPECLLTPLPPSAPPSVDDNLK-TPPECVCSLP 339
T PP T PP+ PS TPP +LP
Sbjct: 1481 TTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLP 1518
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/92 (29%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTP------LPPSALPSADDNLKTPAECLLYPLPPS 300
P PPT + + + P+ +TP LPP+ PS T P PP+
Sbjct: 1484 PSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPT 1543
Query: 301 ADDNLKTPPECLLTPLPPSAPPSVDDNLKTPP 332
TPP T LPP+ PS T P
Sbjct: 1544 TTP--ITPPTS-TTTLPPTTTPSPPPTTTTTP 1572
Score = 32.7 bits (73), Expect = 0.50
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 268 ECLLTPLPPSALPSADDNLKTPAECLLYPLPPSA------DDNLKTPPECLLTPLPPSAP 321
+C+ TP PP+ PS T P PP+ +PP T PP+
Sbjct: 1394 KCITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTT 1453
Query: 322 PSVDDNLKTPP 332
PS + T P
Sbjct: 1454 PSPPISTTTTP 1464
Score = 32.7 bits (73), Expect = 0.50
Identities = 25/91 (27%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPS-----A 301
PPP T S I + S P+ + TP P + S TP+ PP+ +
Sbjct: 1675 PPPTTTPSSPITTTPS--PPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPS 1732
Query: 302 DDNLKTPPECLLTPLPPSAPPSVDDNLKTPP 332
+PP +T LPP+ S PP
Sbjct: 1733 PTTTPSPPTTTMTTLPPTTTSSPLTTTPLPP 1763
Score = 32.3 bits (72), Expect = 0.65
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 5/85 (5%)
Query: 248 PPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKT 307
PPPT S + + +P T PP+ PS T P PP+ T
Sbjct: 1572 PPPTTTPS--PPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTP--IT 1627
Query: 308 PPECLLTPLPPSAPPSVDDNLKTPP 332
PP T LPP+ PS T P
Sbjct: 1628 PPTS-TTTLPPTTTPSPPPTTTTTP 1651
Score = 32.0 bits (71), Expect = 0.85
Identities = 25/100 (25%), Positives = 32/100 (32%), Gaps = 8/100 (8%)
Query: 248 PPPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKT 307
PPPT S + + P+ TP PP+ P T P PP
Sbjct: 1596 PPPTTTPSPPTTTTTTPPPTT---TPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPP 1652
Query: 308 P-----PECLLTPLPPSAPPSVDDNLKTPPECVCSLPFHP 342
P P TP PP + TP + + P P
Sbjct: 1653 PTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPP 1692
Score = 31.2 bits (69), Expect = 1.4
Identities = 28/114 (24%), Positives = 38/114 (33%), Gaps = 21/114 (18%)
Query: 247 PPPPTQQHSIIDNSLSLKTPSECLLTP------LPPSALPSADDNLKTPAECLLYPLPPS 300
P PPT + + + P+ +TP LPP+ PS T P PP+
Sbjct: 1523 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1582
Query: 301 ADD--------------NLKTPPECLLTPLPPSAPPSVDDNLK-TPPECVCSLP 339
+PP T PP+ PS TPP +LP
Sbjct: 1583 TTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLP 1636
Score = 30.8 bits (68), Expect = 1.9
Identities = 26/99 (26%), Positives = 32/99 (32%), Gaps = 22/99 (22%)
Query: 263 LKTPSECLLTP---------LPPSALPSADDNLKTPAECLLYPLP-------------PS 300
+ TPS TP LPP+ PS T P P PS
Sbjct: 1396 ITTPSPPTTTPSPPPTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPPTTTPS 1455
Query: 301 ADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSLP 339
+ T P TP PP+ PS +PP + P
Sbjct: 1456 PPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTP 1494
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 37.7 bits (86), Expect = 0.015
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 13/79 (16%)
Query: 261 LSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADD------NLKTPPECLLT 314
L+ +PS P+PP DN TP L P PP A + PP
Sbjct: 304 LATPSPSGTKARPVPPP------DNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTL 357
Query: 315 PLPPSAPPS-VDDNLKTPP 332
P PP+ PPS ++ TPP
Sbjct: 358 PSPPATPPSQAPPSMTTPP 376
Score = 34.7 bits (78), Expect = 0.13
Identities = 38/124 (30%), Positives = 47/124 (37%), Gaps = 24/124 (19%)
Query: 234 LTAETLKNRMGHQPPPPTQQHSIIDNSLSLKTPSECLLTPL--PPSAL----PSADDNLK 287
LT L+N + PPP Q S + L+TP PL PPS L P ++
Sbjct: 530 LTTPPLEN-LPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIA 588
Query: 288 TPAECLLYPLPPSADDNLKTPP---------ECLLTPLPPSAPPSVDDNLKTPPECVCSL 338
TP PP A L +PP L TP P + P L+ PP S
Sbjct: 589 TP--------PPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASP 640
Query: 339 PFHP 342
P P
Sbjct: 641 PLSP 644
Score = 32.0 bits (71), Expect = 0.85
Identities = 39/125 (31%), Positives = 51/125 (40%), Gaps = 34/125 (27%)
Query: 238 TLKNRMGHQPP--PPTQQHSIIDNSLSLKTPSECLLTPL-------PPSALPS-ADDNLK 287
T +R PP PP Q + S L+T ++PL P AL S A + +
Sbjct: 442 TSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQ 501
Query: 288 TPAECLLYP--------LPPSADDNLKTPPECLLTP----LPPSAPPSVD--------DN 327
P L+ P PPS L+TPP L TP LP APP + +
Sbjct: 502 APLSSLIMPPLETQSSLAPPS----LQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPH 557
Query: 328 LKTPP 332
L+TPP
Sbjct: 558 LETPP 562
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 4/72 (5%)
Query: 273 PLPPSALPSADDNLKTPAECLLYPL--PPSADDNLKTPPECLLTPLPPSAPPSVDDNLKT 330
P P PSA + P PL PPS + P TP P + PP L+
Sbjct: 680 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA--TPPPQAPPPLAAPPLQV 737
Query: 331 PPECVCSLPFHP 342
PP S P P
Sbjct: 738 PPSPPASPPMSP 749
Score = 30.0 bits (66), Expect = 3.2
Identities = 28/95 (29%), Positives = 34/95 (35%), Gaps = 6/95 (6%)
Query: 249 PPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSADDNLKTPAECLLYPLPPSADDNLKTP 308
PP+Q + PS P+ PSA P A L P P A +P
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPA-----SP 745
Query: 309 PECLLTPLPPSAPPSVD-DNLKTPPECVCSLPFHP 342
P PP PP + L+ PP SLP P
Sbjct: 746 PMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSP 780
Score = 28.5 bits (62), Expect = 9.4
Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 13/69 (18%)
Query: 276 PSALPSADDNLKTPAECLLYPLPPSADDNLKTPPECLLTPLP------------PSAPPS 323
P+ P + L TP+ P DN TP L P P PSAPPS
Sbjct: 294 PALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPS 353
Query: 324 VDDNLKTPP 332
+ L +PP
Sbjct: 354 L-QTLPSPP 361
Score = 28.5 bits (62), Expect = 9.4
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 9/62 (14%)
Query: 273 PLPPSALPSADDNLKTPAECLLYPL--PPSADDNLKTPPECLLTPLPPSAPPSVDDNLKT 330
P P PSA + P PL PPS +L P L PP APP+ L T
Sbjct: 742 PASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSP---LAKPPPQAPPA----LAT 794
Query: 331 PP 332
PP
Sbjct: 795 PP 796
>gi|63054848 coiled-coil domain containing 34 isoform 1 [Homo
sapiens]
Length = 373
Score = 37.7 bits (86), Expect = 0.015
Identities = 23/114 (20%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 85 QQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAK 144
QQ +R +E KI+ E+ W Q + + + K R+ K+ N+ + ++ K
Sbjct: 170 QQLEKRKEMEEREKRKIIAEEKHKEWVQKKNEQKRKEREQKI----NKEMEEKAAKELEK 225
Query: 145 EHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQALRRRAEDY 198
E+L++ + ++ + K++ E E K KE E+ ++ + ++ +++
Sbjct: 226 EYLQEKAKEKYQEWLKKKNAEECERKKKEKEKEKQQQAEIQEKKEIAEKKFQEW 279
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 37.4 bits (85), Expect = 0.020
Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 273 PLPPSALP-SADDNLKTP----AECLLYPLPPSADDNLKTPPECLLTPLPPSAPPSVDDN 327
P+PP+A P S L TP A PPS L TPP P + PPS
Sbjct: 1103 PMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1162
Query: 328 LKTPP 332
L TPP
Sbjct: 1163 LATPP 1167
Score = 35.0 bits (79), Expect = 0.10
Identities = 36/114 (31%), Positives = 42/114 (36%), Gaps = 9/114 (7%)
Query: 227 GLPYWPYLTAETLKNRMGHQPP---PPTQQHSIIDNSLSLKTPSECLLTPLPPSALPSAD 283
G P P T + K + P P T + L TPS P + PS
Sbjct: 1170 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1229
Query: 284 DNLKTP----AECLLYPLPPSADDNLKTPPECLLTPLPPSA-PPSVDDNLKTPP 332
L TP A PPS TPP P PP+A PPS+ L TPP
Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPP-KGAPTPPAATPPSLKGGLATPP 1282
Score = 33.9 bits (76), Expect = 0.22
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Query: 273 PLPPSALPSADDN---LKTPAECLLYPL--PPSADDNLKTPPECLLTPLPPSAPPSVDDN 327
P PP+A P + +P + P PPS L TPP P + PPS
Sbjct: 1080 PTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGG 1139
Query: 328 LKTPP 332
L TPP
Sbjct: 1140 LATPP 1144
Score = 33.5 bits (75), Expect = 0.29
Identities = 27/112 (24%), Positives = 38/112 (33%), Gaps = 22/112 (19%)
Query: 249 PPTQQHSIIDNSLSLKTPSECLLTPL------PPSALPSADDNLKTPAECLLYP------ 296
PP + ++ TP E TP PP+ PS +P E L+ P
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPS 1609
Query: 297 ----------LPPSADDNLKTPPECLLTPLPPSAPPSVDDNLKTPPECVCSL 338
PPS + TP PP P S+ D+ +P C +
Sbjct: 1610 PKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKM 1661
Score = 31.6 bits (70), Expect = 1.1
Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 263 LKTPSECLLTPLPPSALPSADDNLKTP----AECLLYPLPPSADDNLKTPPECLLTPLPP 318
L TP P + PS L TP A PPS L TPP P
Sbjct: 1117 LATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPA 1176
Query: 319 SAPPSVDDNLKTP 331
+ PPS L TP
Sbjct: 1177 ATPPSPKGGLATP 1189
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,461,132
Number of Sequences: 37866
Number of extensions: 879133
Number of successful extensions: 6219
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 316
Number of HSP's that attempted gapping in prelim test: 4759
Number of HSP's gapped (non-prelim): 1230
length of query: 350
length of database: 18,247,518
effective HSP length: 103
effective length of query: 247
effective length of database: 14,347,320
effective search space: 3543788040
effective search space used: 3543788040
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.