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Search of human proteins with 145611434
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|145611434 abhydrolase domain containing 8 [Homo sapiens]
(439 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145611434 abhydrolase domain containing 8 [Homo sapiens] 896 0.0
gi|218777837 abhydrolase domain containing 7 [Homo sapiens] 70 3e-12
gi|27597073 epoxide hydrolase 2, cytoplasmic [Homo sapiens] 58 2e-08
gi|218777840 abhydrolase domain containing 9 [Homo sapiens] 56 6e-08
gi|13376164 abhydrolase domain containing 9 [Homo sapiens] 56 6e-08
gi|51242953 monoglyceride lipase isoform 2 [Homo sapiens] 50 4e-06
gi|6005786 monoglyceride lipase isoform 1 [Homo sapiens] 50 4e-06
gi|221316588 biphenyl hydrolase-like [Homo sapiens] 40 0.003
gi|18777795 serine hydrolase-like 2 [Homo sapiens] 40 0.004
gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo sap... 39 0.012
gi|50658087 abhydrolase domain containing 4 [Homo sapiens] 37 0.036
gi|122937424 one cut homeobox 3 [Homo sapiens] 37 0.046
gi|31542303 abhydrolase domain containing 5 [Homo sapiens] 36 0.061
gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo sap... 36 0.061
gi|188536004 zinc finger protein 469 [Homo sapiens] 35 0.10
gi|38788260 bromodomain PHD finger transcription factor isoform ... 35 0.10
gi|38788274 bromodomain PHD finger transcription factor isoform ... 35 0.10
gi|210031154 zinc finger protein 541 [Homo sapiens] 35 0.10
gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens] 35 0.18
gi|153792074 proline rich 12 [Homo sapiens] 35 0.18
gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens] 34 0.23
gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo ... 34 0.23
gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens] 34 0.23
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i... 34 0.23
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s... 34 0.23
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 33 0.39
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 33 0.39
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 33 0.39
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 33 0.51
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 33 0.51
>gi|145611434 abhydrolase domain containing 8 [Homo sapiens]
Length = 439
Score = 896 bits (2315), Expect = 0.0
Identities = 439/439 (100%), Positives = 439/439 (100%)
Query: 1 MLTGVTDGIFCCLLGTPPNAVGPLESVESSDGYTFVEVKPGRVLRVKHAGPAPAAAPPPP 60
MLTGVTDGIFCCLLGTPPNAVGPLESVESSDGYTFVEVKPGRVLRVKHAGPAPAAAPPPP
Sbjct: 1 MLTGVTDGIFCCLLGTPPNAVGPLESVESSDGYTFVEVKPGRVLRVKHAGPAPAAAPPPP 60
Query: 61 SSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLHGQNGSGEPPAALEVE 120
SSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLHGQNGSGEPPAALEVE
Sbjct: 61 SSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLHGQNGSGEPPAALEVE 120
Query: 121 LADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRPKRTIHIDCEKRITSCKGAQADVVLFF 180
LADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRPKRTIHIDCEKRITSCKGAQADVVLFF
Sbjct: 121 LADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRPKRTIHIDCEKRITSCKGAQADVVLFF 180
Query: 181 IHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKR 240
IHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKR
Sbjct: 181 IHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKR 240
Query: 241 YAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGPTALEPSFCSIFNMPTCVLHC 300
YAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGPTALEPSFCSIFNMPTCVLHC
Sbjct: 241 YAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGPTALEPSFCSIFNMPTCVLHC 300
Query: 301 LSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRAMMSGQYWPEGDEVYHAELTV 360
LSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRAMMSGQYWPEGDEVYHAELTV
Sbjct: 301 LSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRAMMSGQYWPEGDEVYHAELTV 360
Query: 361 PVLLVHGMHDKFVPVEEDQRMAEILLLAFLKLIDEGSHMVMLECPETVNTLLHEFLLWEP 420
PVLLVHGMHDKFVPVEEDQRMAEILLLAFLKLIDEGSHMVMLECPETVNTLLHEFLLWEP
Sbjct: 361 PVLLVHGMHDKFVPVEEDQRMAEILLLAFLKLIDEGSHMVMLECPETVNTLLHEFLLWEP 420
Query: 421 EPSPKALPEPLPAPPEDKK 439
EPSPKALPEPLPAPPEDKK
Sbjct: 421 EPSPKALPEPLPAPPEDKK 439
>gi|218777837 abhydrolase domain containing 7 [Homo sapiens]
Length = 362
Score = 70.5 bits (171), Expect = 3e-12
Identities = 75/272 (27%), Positives = 112/272 (41%), Gaps = 32/272 (11%)
Query: 171 GAQADVVLFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYAL 230
G + ++ +HG W+ QL F + Y VVA DL G+G + AP Y L
Sbjct: 89 GERGKPLMLLLHGFPEFWYSWRYQLREF-KSEYRVVALDLRGYGETDAPIHRQNYKLDCL 147
Query: 231 AEDMRAIFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGPTA-------- 282
D++ I + VLIGH +G +A YP++V K+I+IN P
Sbjct: 148 ITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVINFPHPNVFTEYILRH 207
Query: 283 ----LEPSFCSIFNMPTCVLHCLSPCLAWSFLKAGFARQ----GAKEKQLLKEGNAFNVS 334
L+ S+ F +P S + LK F G K QL E +
Sbjct: 208 PAQLLKSSYYYFFQIPWFPEFMFS-INDFKVLKHLFTSHSTGIGRKGCQLTTEDLEAYIY 266
Query: 335 SFVLRAMMSGQYWPEGD-----EVYHAELTVPVLLVHGMHDKFVPVEEDQRMAEILLLAF 389
F +SG + + H +T P LL+ G +D F+ VE MAE+ +
Sbjct: 267 VFSQPGALSGPINHYRNIFSCLPLKHHMVTTPTLLLWGENDAFMEVE----MAEVTKIYV 322
Query: 390 -----LKLIDEGSHMVMLECPETVNTLLHEFL 416
L ++ E SH + + P+ VN L+ FL
Sbjct: 323 KNYFRLTILSEASHWLQQDQPDIVNKLIWTFL 354
>gi|27597073 epoxide hydrolase 2, cytoplasmic [Homo sapiens]
Length = 555
Score = 57.8 bits (138), Expect = 2e-08
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 182 HGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKRY 241
HG S W+ Q+ + GY V+A D+ G+G SSAP Y L ++M +
Sbjct: 265 HGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKL 324
Query: 242 AKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMIN 276
+ V IGH +G ++A YP+ V V +N
Sbjct: 325 GLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLN 359
>gi|218777840 abhydrolase domain containing 9 [Homo sapiens]
Length = 360
Score = 56.2 bits (134), Expect = 6e-08
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 177 VLFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRA 236
++ F+HG + W+ QL F + + VVA DL G+G S AP+ YT L D++
Sbjct: 99 LMLFLHGFPENWFSWRYQLREF-QSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKD 157
Query: 237 IFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMING 277
+ + +L+ H +G + YP LV ++++++G
Sbjct: 158 VILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSG 198
>gi|13376164 abhydrolase domain containing 9 [Homo sapiens]
Length = 360
Score = 56.2 bits (134), Expect = 6e-08
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 177 VLFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRA 236
++ F+HG + W+ QL F + + VVA DL G+G S AP+ YT L D++
Sbjct: 99 LMLFLHGFPENWFSWRYQLREF-QSRFHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKD 157
Query: 237 IFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMING 277
+ + +L+ H +G + YP LV ++++++G
Sbjct: 158 VILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVSG 198
>gi|51242953 monoglyceride lipase isoform 2 [Homo sapiens]
Length = 303
Score = 50.1 bits (118), Expect = 4e-06
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 30/259 (11%)
Query: 177 VLFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMR- 235
++F HG G ++E + L V A D GHG S ++ + F+ D+
Sbjct: 44 LIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVS-DFHVFVRDVLQ 102
Query: 236 ---AIFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGPTAL-EPSFCSIF 291
++ K Y L+GHS G + A E P +++I+ P L P + F
Sbjct: 103 HVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLIS---PLVLANPESATTF 159
Query: 292 NMPTC-VLHCLSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRAMMSGQYWPEG 350
+ VL+ + P L+ + + + E + +N + RA + + G
Sbjct: 160 KVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDI------YNSDPLICRAGLKVCF---G 210
Query: 351 DEVYHA---------ELTVPVLLVHGMHDKFVPVEEDQRMAEILLLA--FLKLIDEGSHM 399
++ +A +LTVP LL+ G D+ + + E+ LK+ + H+
Sbjct: 211 IQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHV 270
Query: 400 VMLECPETVNTLLHEFLLW 418
+ E PE N++ HE +W
Sbjct: 271 LHKELPEVTNSVFHEINMW 289
>gi|6005786 monoglyceride lipase isoform 1 [Homo sapiens]
Length = 313
Score = 50.1 bits (118), Expect = 4e-06
Identities = 59/259 (22%), Positives = 106/259 (40%), Gaps = 30/259 (11%)
Query: 177 VLFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMR- 235
++F HG G ++E + L V A D GHG S ++ + F+ D+
Sbjct: 54 LIFVSHGAGEHSGRYEELARMLMGLDLLVFAHDHVGHGQSEGERMVVS-DFHVFVRDVLQ 112
Query: 236 ---AIFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGPTAL-EPSFCSIF 291
++ K Y L+GHS G + A E P +++I+ P L P + F
Sbjct: 113 HVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLIS---PLVLANPESATTF 169
Query: 292 NMPTC-VLHCLSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRAMMSGQYWPEG 350
+ VL+ + P L+ + + + E + +N + RA + + G
Sbjct: 170 KVLAAKVLNLVLPNLSLGPIDSSVLSRNKTEVDI------YNSDPLICRAGLKVCF---G 220
Query: 351 DEVYHA---------ELTVPVLLVHGMHDKFVPVEEDQRMAEILLLA--FLKLIDEGSHM 399
++ +A +LTVP LL+ G D+ + + E+ LK+ + H+
Sbjct: 221 IQLLNAVSRVERALPKLTVPFLLLQGSADRLCDSKGAYLLMELAKSQDKTLKIYEGAYHV 280
Query: 400 VMLECPETVNTLLHEFLLW 418
+ E PE N++ HE +W
Sbjct: 281 LHKELPEVTNSVFHEINMW 299
>gi|221316588 biphenyl hydrolase-like [Homo sapiens]
Length = 291
Score = 40.4 bits (93), Expect = 0.003
Identities = 49/221 (22%), Positives = 85/221 (38%), Gaps = 26/221 (11%)
Query: 203 YEVVAPDLAGHGASSAPQVAAAYTFYAL-AEDMRAIFKRYAKKRNVLIGHSYGVSFCTFL 261
+ VVA D G+G S P F+ A+D + K K+ L+G S G
Sbjct: 89 FTVVAWDPRGYGHSRPPDRDFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIA 148
Query: 262 AHEYPDLVHKVIMINGGGPTALEPSFCSIFNMPTCVLHCLSPCLAWSFLKAGFARQGAKE 321
A +YP +HK+++ E S + + WS +
Sbjct: 149 AAKYPSYIHKMVIWGANAYVTDEDSM---------IYEGIRDVSKWS----------ERT 189
Query: 322 KQLLKEGNAFNVSSFVLRAMMSG----QYWPEGDEVYHA--ELTVPVLLVHGMHDKFVPV 375
++ L+ ++ + + G ++ P+G+ H + P L+VHG D VP
Sbjct: 190 RKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRVQCPALIVHGEKDPLVPR 249
Query: 376 EEDQRMAEILLLAFLKLIDEGSHMVMLECPETVNTLLHEFL 416
+ + + + L L+ EG H + L + N L +FL
Sbjct: 250 FHADFIHKHVKGSRLHLMPEGKHNLHLRFADEFNKLAEDFL 290
>gi|18777795 serine hydrolase-like 2 [Homo sapiens]
Length = 314
Score = 40.0 bits (92), Expect = 0.004
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
Query: 191 WKEQLDFFVRL------GYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRAIFKRYAKK 244
W + F RL + VA D GHG SS Y ++R +
Sbjct: 41 WLDNASSFDRLIPLLPQDFYYVAMDFGGHGLSSHYSPGVPYYLQTFVSEIRRVVAALKWN 100
Query: 245 RNVLIGHSY-----GVSFCTFLAHEYPDLVHKVIMIN 276
R ++GHS+ G+ FCTF P++V K+I+++
Sbjct: 101 RFSILGHSFGGVVGGMFFCTF-----PEMVDKLILLD 132
>gi|23200008 abhydrolase domain containing 11 isoform 1 [Homo
sapiens]
Length = 315
Score = 38.5 bits (88), Expect = 0.012
Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 142 SGSGGRRRRARRPKRTIHIDCEKRITSCKGAQADVVLFFIHGVGGSLAIWKEQLDFFVR- 200
S SGGR RP + R+ + A VV F+HG+ GS + +
Sbjct: 40 SSSGGRGGAEPRP-----LPLSYRLLDGEAALPAVV--FLHGLFGSKTNFNSIAKILAQQ 92
Query: 201 LGYEVVAPDLAGHGASS-APQVAAAYTFYALAEDMRAIFKRYAKKRNVLIGHSYGVSFCT 259
G V+ D HG S +P ++ + +++D++ + + V++GHS G
Sbjct: 93 TGRRVLTVDARNHGDSPHSPDMS----YEIMSQDLQDLLPQLGLVPCVVVGHSMGGKTAM 148
Query: 260 FLAHEYPDLVHKVIMIN 276
LA + P+LV ++I ++
Sbjct: 149 LLALQRPELVERLIAVD 165
>gi|50658087 abhydrolase domain containing 4 [Homo sapiens]
Length = 342
Score = 37.0 bits (84), Expect = 0.036
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Query: 178 LFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDLAGHGASSAPQV-----AAAYTFYALAE 232
L +HG GG + +W +D + + DL G G SS P A F E
Sbjct: 71 LVMVHGFGGGVGLWILNMDS-LSARRTLHTFDLLGFGRSSRPAFPRDPEGAEDEFVTSIE 129
Query: 233 DMRAIFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGG 279
R + +L+GHS G T + +YPD V +I+++ G
Sbjct: 130 TWR---ETMGIPSMILLGHSLGGFLATSYSIKYPDRVKHLILVDPWG 173
>gi|122937424 one cut homeobox 3 [Homo sapiens]
Length = 494
Score = 36.6 bits (83), Expect = 0.046
Identities = 40/133 (30%), Positives = 49/133 (36%), Gaps = 34/133 (25%)
Query: 48 HAGPAPAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRL----------LVENLGR 97
HA P PAAAPPPP AA S + R + G L + L
Sbjct: 142 HAHPHPAAAPPPPPPPQRLAASVSGSFTLMRDERAALASVGHLYGPYGKELPAMGSPLSP 201
Query: 98 APRA--DLLHGQ-------------------NGSGE---PPAALEVELADPAGSDGRLAP 133
P A LHG + +G+ PPAA E A ++ LA
Sbjct: 202 LPNALPPALHGAPQPPPPPPPPPLAAYGPPGHLAGDKLLPPAAFEPHAALLGRAEDALAR 261
Query: 134 GSAGSGSGSGSGG 146
G G G G+GSGG
Sbjct: 262 GLPGGGGGTGSGG 274
>gi|31542303 abhydrolase domain containing 5 [Homo sapiens]
Length = 349
Score = 36.2 bits (82), Expect = 0.061
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 178 LFFIHGVGGSLAIWKEQLDFF-VRLGYEVVAPDLAGHGASSAPQVAAAYTFYALAEDMRA 236
L +HG GG L +W L+F + V A DL G G SS P+ F + AE++
Sbjct: 78 LVLLHGFGGGLGLWA--LNFGDLCTNRPVYAFDLLGFGRSSRPR------FDSDAEEVEN 129
Query: 237 IFKRYAKK--------RNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGG 279
F ++ + +L+GH+ G + +YP V+ +I++ G
Sbjct: 130 QFVESIEEWRCALGLDKMILLGHNLGGFLAAAYSLKYPSRVNHLILVEPWG 180
>gi|23200012 abhydrolase domain containing 11 isoform 2 [Homo
sapiens]
Length = 308
Score = 36.2 bits (82), Expect = 0.061
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 136 AGSGSGSGSGGRRRRARRPKRTIHIDCEKRITSCKGAQADVVLFFIHGVGGSLAIWKEQL 195
A S S G GG E R+ + A VV F+HG+ GS +
Sbjct: 37 APSSSSGGRGG---------------AEPRLLDGEAALPAVV--FLHGLFGSKTNFNSIA 79
Query: 196 DFFVR-LGYEVVAPDLAGHGASS-APQVAAAYTFYALAEDMRAIFKRYAKKRNVLIGHSY 253
+ G V+ D HG S +P ++ + +++D++ + + V++GHS
Sbjct: 80 KILAQQTGRRVLTVDARNHGDSPHSPDMS----YEIMSQDLQDLLPQLGLVPCVVVGHSM 135
Query: 254 GVSFCTFLAHEYPDLVHKVIMIN 276
G LA + P+LV ++I ++
Sbjct: 136 GGKTAMLLALQRPELVERLIAVD 158
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 35.4 bits (80), Expect = 0.10
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 15/116 (12%)
Query: 41 GRVLRVKHAGPAPAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPR 100
G L+ K AG P + PPP A++ Q G C R GR +LG AP
Sbjct: 882 GHPLKSK-AGVTPESKAPPPLPAATPDPQTPRPGDRGCPAR------GRPKTRSLGLAPT 934
Query: 101 ADLLHGQNGSGEPPAALEVELADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRPKR 156
Q L++ D L G A GSGSG GG R RP+R
Sbjct: 935 EADAPSQGRQQRRGKQLKLFRKD-------LDSGGAAEGSGSGGGG-RASGLRPRR 982
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 35.4 bits (80), Expect = 0.10
Identities = 32/117 (27%), Positives = 41/117 (35%), Gaps = 16/117 (13%)
Query: 47 KHAGPAPAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLHG 106
+ PAP PPPP+S G + GL + R GR AP+ L
Sbjct: 18 ERCAPAPPPPPPPPTS-------GPIGGL---RSRHRGSSRGRWAAAQAEVAPKTRLSSP 67
Query: 107 QNGSGE----PPAALEVELADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRPKRTIH 159
+ GS PP G GR G G G G GG R +R ++
Sbjct: 68 RGGSSSRRKPPPPPPAPPSTSAPGRGGR--GGGGGRTGGGGGGGHLARTTAARRAVN 122
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 35.4 bits (80), Expect = 0.10
Identities = 32/117 (27%), Positives = 41/117 (35%), Gaps = 16/117 (13%)
Query: 47 KHAGPAPAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLHG 106
+ PAP PPPP+S G + GL + R GR AP+ L
Sbjct: 18 ERCAPAPPPPPPPPTS-------GPIGGL---RSRHRGSSRGRWAAAQAEVAPKTRLSSP 67
Query: 107 QNGSGE----PPAALEVELADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRPKRTIH 159
+ GS PP G GR G G G G GG R +R ++
Sbjct: 68 RGGSSSRRKPPPPPPAPPSTSAPGRGGR--GGGGGRTGGGGGGGHLARTTAARRAVN 122
>gi|210031154 zinc finger protein 541 [Homo sapiens]
Length = 1365
Score = 35.4 bits (80), Expect = 0.10
Identities = 50/191 (26%), Positives = 68/191 (35%), Gaps = 19/191 (9%)
Query: 37 EVKPGRVLRVKHAGPAPAAAPPPPSSASSDAAQG-DLSGLVRCQRRITVYRNGRLLVENL 95
E PG R G AA P P ++ S D ++ D+S L + R G L +E++
Sbjct: 637 EASPGSTRRDAKGGLKVAAVPTPLAAPSLDPSRNPDISSLAKQLRS----SKGTLDLEDI 692
Query: 96 GRAPRADLLHGQNGSGEPPAALEVELADPA--GSDGRLAPGSAGSGSGSGSGGRRRRARR 153
P Q G EPP A PA G+ R+ G G G G R R
Sbjct: 693 --FPSTGQRQTQLGGEEPPGASLPGKQAPAENGAASRITKGEKGPACSRGGGYRLLGNPR 750
Query: 154 PKRTIHIDCEKRITS--CKGAQADVVLFFIHGVGGSLAIWKEQLDFF--------VRLGY 203
R EK C + + V + G K +L F RL +
Sbjct: 751 APRFSGFRKEKAKMDMCCAASPSQVAMASFSSAGPPADPSKSKLTIFSRIQGGNIYRLPH 810
Query: 204 EVVAPDLAGHG 214
V ++AG G
Sbjct: 811 PVKEENVAGRG 821
>gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]
Length = 462
Score = 34.7 bits (78), Expect = 0.18
Identities = 38/123 (30%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 48 HAGPAPAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLHGQ 107
H P PA P SSA+++ R +RR + R GR G A AD
Sbjct: 275 HCAPPPADVEPDESSAAAE----------RRRRRGALRRGGRRRAGAEGGAGGAD----- 319
Query: 108 NGSGEPPAALE---VELADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRPKRTIHIDCEK 164
G G P A E + + G GRL+ S+ S S RR R+ +R + EK
Sbjct: 320 -GQGAGPGAAESGALTASRSPGPGGRLSRASSRSVEFFLSRRRRARSSVCRRKVAQAREK 378
Query: 165 RIT 167
R T
Sbjct: 379 RFT 381
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 34.7 bits (78), Expect = 0.18
Identities = 34/99 (34%), Positives = 41/99 (41%), Gaps = 21/99 (21%)
Query: 53 PAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLHGQNGSGE 112
PA+A PPP + A Q LS C ++G RA+L G GE
Sbjct: 295 PASAQPPPPPPPAHALQHYLS----CGGSYP----------SMGH--RANLACSPLGGGE 338
Query: 113 P-PAALEVELADP----AGSDGRLAPGSAGSGSGSGSGG 146
P P A E A P AG+ GR A G G+G GG
Sbjct: 339 PSPGAGEPSKAGPSGATAGASGRATGPEAAGGGGAGGGG 377
Score = 29.3 bits (64), Expect = 7.4
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Query: 14 LGTPPNAVGPLESVESSDGYTFVEVKPGRVLRVKHAGPAPAAAPPPPSSASSDAAQGDLS 73
LG PN L S +++ ++ P H P PPPP A + +G L+
Sbjct: 1008 LGLDPNKPPELPSTVNAEPLGLIQSGP-------HQAAPPPPPPPPPPPAPASEPKGGLT 1060
Query: 74 GLVRCQRR 81
+ C +
Sbjct: 1061 SPIFCSTK 1068
>gi|169172132 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 528
Score = 34.3 bits (77), Expect = 0.23
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 11/44 (25%)
Query: 97 RAPRADLLHGQNGSGEPPAALEVELADPAGSDGRLAPGSAGSGS 140
R PRA G +G EPPAA GRLAP SAG G+
Sbjct: 435 RGPRAGGAQGPSGPSEPPAA-----------QGRLAPDSAGEGA 467
>gi|239743053 PREDICTED: hypothetical protein XP_002342748 [Homo
sapiens]
Length = 591
Score = 34.3 bits (77), Expect = 0.23
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 11/44 (25%)
Query: 97 RAPRADLLHGQNGSGEPPAALEVELADPAGSDGRLAPGSAGSGS 140
R PRA G +G EPPAA GRLAP SAG G+
Sbjct: 498 RGPRAGGAQGPSGPSEPPAA-----------QGRLAPDSAGEGA 530
>gi|113419423 PREDICTED: similar to forkhead box L2 [Homo sapiens]
Length = 387
Score = 34.3 bits (77), Expect = 0.23
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 11/44 (25%)
Query: 97 RAPRADLLHGQNGSGEPPAALEVELADPAGSDGRLAPGSAGSGS 140
R PRA G +G EPPAA GRLAP SAG G+
Sbjct: 202 RGPRAGGAQGPSGPSEPPAA-----------QGRLAPDSAGEGA 234
>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
isoform [Homo sapiens]
Length = 302
Score = 34.3 bits (77), Expect = 0.23
Identities = 31/110 (28%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 46 VKHAGPAPAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLH 105
++ G A AP P S + A+G G R ++ R G + GR
Sbjct: 32 IEQGGQGSALAPSPVSGVRREGARGGGRGRGRWKQ---AGRGGGVCGRGRGRGRGRGRGR 88
Query: 106 GQN-GSGEPPAALEVELADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRP 154
G+ G G PP+ G G G G GSG GG RR P
Sbjct: 89 GRGRGRGRPPS----------GGSGLGGDGGGCGGGGSGGGGAPRREPVP 128
>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
sapiens]
Length = 411
Score = 34.3 bits (77), Expect = 0.23
Identities = 31/110 (28%), Positives = 40/110 (36%), Gaps = 14/110 (12%)
Query: 46 VKHAGPAPAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLH 105
++ G A AP P S + A+G G R ++ R G + GR
Sbjct: 32 IEQGGQGSALAPSPVSGVRREGARGGGRGRGRWKQ---AGRGGGVCGRGRGRGRGRGRGR 88
Query: 106 GQN-GSGEPPAALEVELADPAGSDGRLAPGSAGSGSGSGSGGRRRRARRP 154
G+ G G PP+ G G G G GSG GG RR P
Sbjct: 89 GRGRGRGRPPS----------GGSGLGGDGGGCGGGGSGGGGAPRREPVP 128
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 33.5 bits (75), Expect = 0.39
Identities = 42/122 (34%), Positives = 49/122 (40%), Gaps = 30/122 (24%)
Query: 51 PAPAAAPPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRA-PRAD----LLH 105
PAPA P +A+ G +G R RR + L LGR P A LLH
Sbjct: 141 PAPARTGPAGKAAADRGRPGPAAG--RRVRRSPSFPPFLLAQTRLGRTGPLALCLLLLLH 198
Query: 106 GQNGSGEPPAALEVELADPAGSDGRLAPGSAG--SGSGSGSGGR--------RRRARRPK 155
G G GS +LA G AG + +G G GGR RRR RRP
Sbjct: 199 GAMRLG-------------GGSREKLACGRAGRAARTGRGEGGRRAEEEAAGRRRRRRPG 245
Query: 156 RT 157
RT
Sbjct: 246 RT 247
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 33.5 bits (75), Expect = 0.39
Identities = 32/99 (32%), Positives = 36/99 (36%), Gaps = 14/99 (14%)
Query: 52 APAAA------PPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLH 105
APAAA PPPP S A Q QR G A
Sbjct: 6 APAAASSLGNPPPPPPSELKKAEQQ--------QREEAGGEAAAAAAAERGEMKAAAGQE 57
Query: 106 GQNGSGEPPAALEVELADPAGSDGRLAPGSAGSGSGSGS 144
+ + PP L EL D A S+G G AGSG G G+
Sbjct: 58 SEGPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGA 96
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 33.5 bits (75), Expect = 0.39
Identities = 32/99 (32%), Positives = 36/99 (36%), Gaps = 14/99 (14%)
Query: 52 APAAA------PPPPSSASSDAAQGDLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLH 105
APAAA PPPP S A Q QR G A
Sbjct: 6 APAAASSLGNPPPPPPSELKKAEQQ--------QREEAGGEAAAAAAAERGEMKAAAGQE 57
Query: 106 GQNGSGEPPAALEVELADPAGSDGRLAPGSAGSGSGSGS 144
+ + PP L EL D A S+G G AGSG G G+
Sbjct: 58 SEGPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGA 96
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.51
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 51 PAPAAAPPPPSSASSDAAQGDLSGLVRCQRR--ITVYRNGRLLVENLGRAPRADLLHGQN 108
P P A PPPP+ A ++ + L+ + R ++ G+ L + + A +L
Sbjct: 4 PPPPAPPPPPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPK 63
Query: 109 GSGEPPAALEVELADPAGSDGRLAPGSAGSGSGSGSGG 146
G+G AG G G G G G G GG
Sbjct: 64 GAG-------------AGGGGGGFGGGGGFGGGGGGGG 88
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.1 bits (74), Expect = 0.51
Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 15/98 (15%)
Query: 51 PAPAAAPPPPSSASSDAAQGDLSGLVRCQRR--ITVYRNGRLLVENLGRAPRADLLHGQN 108
P P A PPPP+ A ++ + L+ + R ++ G+ L + + A +L
Sbjct: 4 PPPPAPPPPPTFALANTEKPTLNKTEQAGRNALLSDISKGKKLKKTVTNDRSAPILDKPK 63
Query: 109 GSGEPPAALEVELADPAGSDGRLAPGSAGSGSGSGSGG 146
G+G AG G G G G G G GG
Sbjct: 64 GAG-------------AGGGGGGFGGGGGFGGGGGGGG 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,284,761
Number of Sequences: 37866
Number of extensions: 1075378
Number of successful extensions: 10234
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 9691
Number of HSP's gapped (non-prelim): 610
length of query: 439
length of database: 18,247,518
effective HSP length: 105
effective length of query: 334
effective length of database: 14,271,588
effective search space: 4766710392
effective search space used: 4766710392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.