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Search of human proteins with 9506797
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|9506797 adaptor-related protein complex 1, mu 2 subunit
[Homo sapiens]
(423 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo... 836 0.0
gi|14210504 adaptor-related protein complex 1, mu 1 subunit isof... 702 0.0
gi|194473724 adaptor-related protein complex 1, mu 1 subunit iso... 693 0.0
gi|68799814 adaptor-related protein complex 2, mu 1 subunit isof... 335 6e-92
gi|14917109 adaptor-related protein complex 2, mu 1 subunit isof... 332 5e-91
gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo... 204 2e-52
gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Hom... 204 2e-52
gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Ho... 191 1e-48
gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo... 191 1e-48
gi|14917111 adaptor-related protein complex 4, mu 1 subunit [Hom... 182 5e-46
gi|21361863 stonin 2 [Homo sapiens] 74 3e-13
gi|26787993 stonin 1 [Homo sapiens] 63 4e-10
gi|29553944 STON1-GTF2A1L protein [Homo sapiens] 63 4e-10
gi|224451116 Mu-2 related death-inducing protein [Homo sapiens] 45 1e-04
gi|11863154 archain isoform 1 [Homo sapiens] 39 0.007
gi|189409104 adaptor-related protein complex 4, sigma 1 subunit ... 39 0.012
gi|70906430 adaptor-related protein complex 2, sigma 1 subunit i... 38 0.020
gi|88703051 adaptor-related protein complex 1, sigma 3 subunit [... 37 0.044
gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [H... 35 0.13
gi|22027655 adaptor-related protein complex 1 sigma 2 subunit [H... 34 0.22
gi|63079709 apolipoprotein AV [Homo sapiens] 33 0.64
gi|11038643 adaptor-related protein complex 2, sigma 1 subunit i... 32 1.1
gi|87159812 vacuolar H+ ATPase C2 isoform a [Homo sapiens] 32 1.4
gi|47717098 vacuolar H+ ATPase C2 isoform b [Homo sapiens] 32 1.4
gi|7705983 coatomer protein complex, subunit zeta 2 [Homo sapiens] 31 2.4
gi|82830424 gon-4-like isoform a [Homo sapiens] 31 2.4
gi|144227752 GRAM domain containing 1B [Homo sapiens] 31 2.4
gi|209180434 homeobox containing 1 [Homo sapiens] 30 3.2
gi|47059040 homeobox containing 1 [Homo sapiens] 30 3.2
gi|21361394 adaptor-related protein complex 4, sigma 1 subunit i... 30 3.2
>gi|9506797 adaptor-related protein complex 1, mu 2 subunit [Homo
sapiens]
Length = 423
Score = 836 bits (2159), Expect = 0.0
Identities = 423/423 (100%), Positives = 423/423 (100%)
Query: 1 MSASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWI 60
MSASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWI
Sbjct: 1 MSASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWI 60
Query: 61 KHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDF 120
KHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDF
Sbjct: 61 KHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDF 120
Query: 121 GFPQTTDSKILQEYITQQSNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVN 180
GFPQTTDSKILQEYITQQSNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVN
Sbjct: 121 GFPQTTDSKILQEYITQQSNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVN 180
Query: 181 LLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQ 240
LLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQ
Sbjct: 181 LLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQ 240
Query: 241 CVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQ 300
CVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQ
Sbjct: 241 CVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQ 300
Query: 301 FKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHF 360
FKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHF
Sbjct: 301 FKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHF 360
Query: 361 GLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQL 420
GLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQL
Sbjct: 361 GLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQL 420
Query: 421 RTS 423
RTS
Sbjct: 421 RTS 423
>gi|14210504 adaptor-related protein complex 1, mu 1 subunit isoform
2 [Homo sapiens]
Length = 423
Score = 702 bits (1812), Expect = 0.0
Identities = 337/422 (79%), Positives = 389/422 (92%)
Query: 1 MSASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWI 60
MSASAV++LD+KGK LI RNY+GDV MS++EHFMP+L+++EEEG L+P+L+HG V F+WI
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWI 60
Query: 61 KHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDF 120
KH+NLYLVAT+ KNA SLV+SFLYK ++VF EYFKELEEESIRDNFVI+YELLDELMDF
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF 120
Query: 121 GFPQTTDSKILQEYITQQSNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVN 180
G+PQTTDSKILQEYITQ+ +KLETG R P TVTNAVSWRSEGIKY+KNEVF+DVIESVN
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVN 180
Query: 181 LLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKNKSVELEDVKFHQ 240
LLV+ANG+VL SEIVG+IK++VFLSGMPELRLGLND+VLF+ TGR K+KSVELEDVKFHQ
Sbjct: 181 LLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKSKSVELEDVKFHQ 240
Query: 241 CVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQ 300
CVRLSRF+NDRTISFIPPDG+FELMSYRL+T VKPLIWIESVIEK SHSR+E M+KAK Q
Sbjct: 241 CVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSHSRIEYMIKAKSQ 300
Query: 301 FKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHF 360
FK++S AN VEI +PVP+DADSP+FKT+VGS K+VPE + ++WSIKSFPGGKEYLMRAHF
Sbjct: 301 FKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHF 360
Query: 361 GLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPWVRYITQSGDYQL 420
GLPSVE E+ EG+PPI VKFEIPYFT SGIQVRY+KIIEKSGYQALPWVRYITQ+GDYQL
Sbjct: 361 GLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQL 420
Query: 421 RT 422
RT
Sbjct: 421 RT 422
>gi|194473724 adaptor-related protein complex 1, mu 1 subunit
isoform 1 [Homo sapiens]
Length = 435
Score = 693 bits (1789), Expect = 0.0
Identities = 337/434 (77%), Positives = 389/434 (89%), Gaps = 12/434 (2%)
Query: 1 MSASAVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWI 60
MSASAV++LD+KGK LI RNY+GDV MS++EHFMP+L+++EEEG L+P+L+HG V F+WI
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEGMLSPILAHGGVRFMWI 60
Query: 61 KHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDF 120
KH+NLYLVAT+ KNA SLV+SFLYK ++VF EYFKELEEESIRDNFVI+YELLDELMDF
Sbjct: 61 KHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESIRDNFVIIYELLDELMDF 120
Query: 121 GFPQTTDSKILQEYITQQSNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVN 180
G+PQTTDSKILQEYITQ+ +KLETG R P TVTNAVSWRSEGIKY+KNEVF+DVIESVN
Sbjct: 121 GYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWRSEGIKYRKNEVFLDVIESVN 180
Query: 181 LL------------VNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGRSKN 228
LL V+ANG+VL SEIVG+IK++VFLSGMPELRLGLND+VLF+ TGR K+
Sbjct: 181 LLGKYPGVGWLGHTVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKVLFDNTGRGKS 240
Query: 229 KSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSH 288
KSVELEDVKFHQCVRLSRF+NDRTISFIPPDG+FELMSYRL+T VKPLIWIESVIEK SH
Sbjct: 241 KSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPLIWIESVIEKHSH 300
Query: 289 SRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSF 348
SR+E M+KAK QFK++S AN VEI +PVP+DADSP+FKT+VGS K+VPE + ++WSIKSF
Sbjct: 301 SRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSF 360
Query: 349 PGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPW 408
PGGKEYLMRAHFGLPSVE E+ EG+PPI VKFEIPYFT SGIQVRY+KIIEKSGYQALPW
Sbjct: 361 PGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSGYQALPW 420
Query: 409 VRYITQSGDYQLRT 422
VRYITQ+GDYQLRT
Sbjct: 421 VRYITQNGDYQLRT 434
>gi|68799814 adaptor-related protein complex 2, mu 1 subunit isoform
b [Homo sapiens]
Length = 433
Score = 335 bits (858), Expect = 6e-92
Identities = 166/430 (38%), Positives = 268/430 (62%), Gaps = 16/430 (3%)
Query: 6 VFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSNL 65
+FI + KG+ LISR Y+ D+ + ++ F ++ ++ +P+ + + F +K SN+
Sbjct: 5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHVKRSNI 63
Query: 66 YLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQT 125
+L A T +N NA++V+ FLYK +V YF ++ EE+I++NFV++YELLDE++DFG+PQ
Sbjct: 64 WLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQN 123
Query: 126 TDSKILQEYITQQSNKLETGK--SRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLV 183
+++ L+ +ITQQ K +T + S++ VT + WR EGIKY++NE+F+DV+ESVNLL+
Sbjct: 124 SETGALKTFITQQGIKSQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNLLM 183
Query: 184 NANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGR--------SKNKSVELED 235
+ G VL + + G + +K +LSGMPE + G+ND+++ E G+ S +S+ ++D
Sbjct: 184 SPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAIDD 243
Query: 236 VKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMV 295
FHQCVRLS+FD++R+ISFIPPDG+FELM YR + + + ++ + +++E+ V
Sbjct: 244 CTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTKLEVKV 303
Query: 296 KAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYL 355
K FK +A +E+ +P P + + G AKY N ++W IK G KE
Sbjct: 304 VIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQ 363
Query: 356 MRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEK----SGYQALPWVRY 411
+ A L ++ RPPI + FE+P F SG++VRY+K+ E S + + WVRY
Sbjct: 364 ISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 422
Query: 412 ITQSGDYQLR 421
I +SG Y+ R
Sbjct: 423 IGRSGIYETR 432
>gi|14917109 adaptor-related protein complex 2, mu 1 subunit isoform
a [Homo sapiens]
Length = 435
Score = 332 bits (850), Expect = 5e-91
Identities = 165/432 (38%), Positives = 267/432 (61%), Gaps = 18/432 (4%)
Query: 6 VFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSNL 65
+FI + KG+ LISR Y+ D+ + ++ F ++ ++ +P+ + + F +K SN+
Sbjct: 5 LFIYNHKGEVLISRVYRDDIGRNAVDAFRVNVIHARQQ-VRSPVTNIARTSFFHVKRSNI 63
Query: 66 YLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQT 125
+L A T +N NA++V+ FLYK +V YF ++ EE+I++NFV++YELLDE++DFG+PQ
Sbjct: 64 WLAAVTKQNVNAAMVFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQN 123
Query: 126 TDSKILQEYITQQSNKLE----TGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNL 181
+++ L+ +ITQQ K + +S++ VT + WR EGIKY++NE+F+DV+ESVNL
Sbjct: 124 SETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQIGWRREGIKYRRNELFLDVLESVNL 183
Query: 182 LVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGR--------SKNKSVEL 233
L++ G VL + + G + +K +LSGMPE + G+ND+++ E G+ S +S+ +
Sbjct: 184 LMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQSIAI 243
Query: 234 EDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEI 293
+D FHQCVRLS+FD++R+ISFIPPDG+FELM YR + + + ++ + +++E+
Sbjct: 244 DDCTFHQCVRLSKFDSERSISFIPPDGEFELMRYRTTKDIILPFRVIPLVREVGRTKLEV 303
Query: 294 MVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKE 353
V K FK +A +E+ +P P + + G AKY N ++W IK G KE
Sbjct: 304 KVVIKSNFKPSLLAQKIEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKE 363
Query: 354 YLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEK----SGYQALPWV 409
+ A L ++ RPPI + FE+P F SG++VRY+K+ E S + + WV
Sbjct: 364 SQISAEIELLPTNDKKKWARPPISMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWV 422
Query: 410 RYITQSGDYQLR 421
RYI +SG Y+ R
Sbjct: 423 RYIGRSGIYETR 434
>gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo
sapiens]
Length = 418
Score = 204 bits (518), Expect = 2e-52
Identities = 128/434 (29%), Positives = 225/434 (51%), Gaps = 35/434 (8%)
Query: 5 AVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSN 64
++F+++ G + +++K V+ S ++F + + + P++S + + I
Sbjct: 4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFFEAQEKAADVENVPPVISTPHHYLISIYRDK 63
Query: 65 LYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQ 124
L+ V+ V FL++ + F +YF E E +I+DN VIVYELL+E++D GFP
Sbjct: 64 LFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPL 123
Query: 125 TTDSKILQEYITQQS------NKLETGKSRVPPTVTNA----VSWRSEGIKYKKNEVFID 174
T+S IL+E I + N + TG S V T+ + WR G+KY NE + D
Sbjct: 124 ATESNILKELIKPPTILRSVVNSI-TGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFD 182
Query: 175 VIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLG-LNDRVLFELTGRSKNKSVEL 233
V+E ++ +++ +GS + +EI G I + LSGMP+L L +N R+ L
Sbjct: 183 VVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRL--------------L 228
Query: 234 EDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQ--VKPLIWIESVI---EKFSH 288
+DV FH C+R R++++R +SFIPPDG+F L+SYR+S+Q V ++++ I E S
Sbjct: 229 DDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSC 288
Query: 289 SRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSF 348
R +I + K K G+ ++V +P + + GS + P V+ W +
Sbjct: 289 GRFDITIGPKQNMGK--TIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKI 346
Query: 349 PGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPW 408
K ++ L S + E P + ++F+I +SG++V + + + Y+
Sbjct: 347 TPQKLPSLKGLVNLQS-GAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEK-YKPFKG 404
Query: 409 VRYITQSGDYQLRT 422
V+Y+T++G +Q+RT
Sbjct: 405 VKYVTKAGKFQVRT 418
>gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Homo
sapiens]
Length = 418
Score = 204 bits (518), Expect = 2e-52
Identities = 128/434 (29%), Positives = 225/434 (51%), Gaps = 35/434 (8%)
Query: 5 AVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSN 64
++F+++ G + +++K V+ S ++F + + + P++S + + I
Sbjct: 4 SLFLINCSGDIFLEKHWKSVVSQSVCDYFFEAQEKAADVENVPPVISTPHHYLISIYRDK 63
Query: 65 LYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQ 124
L+ V+ V FL++ + F +YF E E +I+DN VIVYELL+E++D GFP
Sbjct: 64 LFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDNGFPL 123
Query: 125 TTDSKILQEYITQQS------NKLETGKSRVPPTVTNA----VSWRSEGIKYKKNEVFID 174
T+S IL+E I + N + TG S V T+ + WR G+KY NE + D
Sbjct: 124 ATESNILKELIKPPTILRSVVNSI-TGSSNVGDTLPTGQLSNIPWRRAGVKYTNNEAYFD 182
Query: 175 VIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLG-LNDRVLFELTGRSKNKSVEL 233
V+E ++ +++ +GS + +EI G I + LSGMP+L L +N R+ L
Sbjct: 183 VVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRL--------------L 228
Query: 234 EDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQ--VKPLIWIESVI---EKFSH 288
+DV FH C+R R++++R +SFIPPDG+F L+SYR+S+Q V ++++ I E S
Sbjct: 229 DDVSFHPCIRFKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSC 288
Query: 289 SRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSF 348
R +I + K K G+ ++V +P + + GS + P V+ W +
Sbjct: 289 GRFDITIGPKQNMGK--TIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKI 346
Query: 349 PGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPW 408
K ++ L S + E P + ++F+I +SG++V + + + Y+
Sbjct: 347 TPQKLPSLKGLVNLQS-GAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEK-YKPFKG 404
Query: 409 VRYITQSGDYQLRT 422
V+Y+T++G +Q+RT
Sbjct: 405 VKYVTKAGKFQVRT 418
>gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Homo
sapiens]
Length = 418
Score = 191 bits (484), Expect = 1e-48
Identities = 125/434 (28%), Positives = 220/434 (50%), Gaps = 35/434 (8%)
Query: 5 AVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSN 64
++F+++ G + +++K V+ S ++F + E + P++ + L +
Sbjct: 4 SLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHK 63
Query: 65 LYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQ 124
++ VA V FL++ ++ F +YF E I+DN V+VYE+L+E++D GFP
Sbjct: 64 IFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPL 123
Query: 125 TTDSKILQEYITQQS------NKLETGKSRV----PPTVTNAVSWRSEGIKYKKNEVFID 174
T+S IL+E I + N + TG + V P + V WR G+KY NE + D
Sbjct: 124 ATESNILKELIKPPTILRTVVNTI-TGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFD 182
Query: 175 VIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLG-LNDRVLFELTGRSKNKSVEL 233
VIE ++ +++ +GS + +EI G I V L+GMP+L L +N R+ L
Sbjct: 183 VIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRL--------------L 228
Query: 234 EDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQ--VKPLIWIE---SVIEKFSH 288
+DV FH CVR R++++R +SFIPPDG+F L+SY +S Q V ++++ S + S
Sbjct: 229 DDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHNISFRDSSSL 288
Query: 289 SRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSF 348
R EI V K K GV ++ +P + S G+ + P ++ W +
Sbjct: 289 GRFEITVGPKQTMGK--TIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKI 346
Query: 349 PGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPW 408
K ++ L + + E P I ++F+I +SG++V + + + Y+
Sbjct: 347 NPQKLPSLKGTMSLQAGASKPDE-NPTINLQFKIQQLAISGLKVNRLDMYGEK-YKPFKG 404
Query: 409 VRYITQSGDYQLRT 422
++Y+T++G +Q+RT
Sbjct: 405 IKYMTKAGKFQVRT 418
>gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo
sapiens]
Length = 418
Score = 191 bits (484), Expect = 1e-48
Identities = 125/434 (28%), Positives = 220/434 (50%), Gaps = 35/434 (8%)
Query: 5 AVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSN 64
++F+++ G + +++K V+ S ++F + E + P++ + L +
Sbjct: 4 SLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHK 63
Query: 65 LYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQ 124
++ VA V FL++ ++ F +YF E I+DN V+VYE+L+E++D GFP
Sbjct: 64 IFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPL 123
Query: 125 TTDSKILQEYITQQS------NKLETGKSRV----PPTVTNAVSWRSEGIKYKKNEVFID 174
T+S IL+E I + N + TG + V P + V WR G+KY NE + D
Sbjct: 124 ATESNILKELIKPPTILRTVVNTI-TGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFD 182
Query: 175 VIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLG-LNDRVLFELTGRSKNKSVEL 233
VIE ++ +++ +GS + +EI G I V L+GMP+L L +N R+ L
Sbjct: 183 VIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRL--------------L 228
Query: 234 EDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQ--VKPLIWIE---SVIEKFSH 288
+DV FH CVR R++++R +SFIPPDG+F L+SY +S Q V ++++ S + S
Sbjct: 229 DDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHNISFRDSSSL 288
Query: 289 SRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSF 348
R EI V K K GV ++ +P + S G+ + P ++ W +
Sbjct: 289 GRFEITVGPKQTMGK--TIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKI 346
Query: 349 PGGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALPW 408
K ++ L + + E P I ++F+I +SG++V + + + Y+
Sbjct: 347 NPQKLPSLKGTMSLQAGASKPDE-NPTINLQFKIQQLAISGLKVNRLDMYGEK-YKPFKG 404
Query: 409 VRYITQSGDYQLRT 422
++Y+T++G +Q+RT
Sbjct: 405 IKYMTKAGKFQVRT 418
>gi|14917111 adaptor-related protein complex 4, mu 1 subunit [Homo
sapiens]
Length = 453
Score = 182 bits (462), Expect = 5e-46
Identities = 131/453 (28%), Positives = 221/453 (48%), Gaps = 38/453 (8%)
Query: 4 SAVFILDVKGKPLISRNYKGDVAMSKI-EHFMPLLVQREEEGALAPLLSHGQVHFLWIKH 62
S FIL KG PLI ++++GD + E F L + + + HG+ HF+ I+H
Sbjct: 3 SQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGDESPVVMHHHGR-HFIHIRH 61
Query: 63 SNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGF 122
S LYLV TTS+N + + L + + +Y L E +I N +VYELLDE++D+G+
Sbjct: 62 SGLYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGY 121
Query: 123 PQTTDSKILQEYITQQS----------------NKLETGKSRVPPTVTNA---VSWRSEG 163
QTT +++L+ +I ++ ET +S+V P+ + +S RS+
Sbjct: 122 VQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSSRSD- 180
Query: 164 IKYKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELT 223
+ +KNEVF+DV+E +++L+ +NGS+L ++ G I+LK FL E+R+GL + +
Sbjct: 181 -QSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVGKS 239
Query: 224 G-RSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDGDFELMSYRLSTQVK---PLIWI 279
R + +++V FH V L F++ R + PP G+ +M Y+LS + P
Sbjct: 240 ELRGYGPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDLPSPLPFRLF 299
Query: 280 ESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERN 339
SV R+++ +K + +S A V + +P+P S + S K
Sbjct: 300 PSVQWDRGSGRLQVYLKLRCDLLSKSQALNVRLHLPLPRGVVSLSQELSSPEQKAELAEG 359
Query: 340 VVIWSIKSFPGGKEYLMRAHFGLPSVEKEEVEGRP---------PIGVKFEIPYFTVSGI 390
+ W + GG + +P G P + FE+P T SG+
Sbjct: 360 ALRWDLPRVQGGSQLSGLFQMDVPGPPGPPSHGLSTSASPLGLGPASLSFELPRHTCSGL 419
Query: 391 QVRYMKIIEKSGYQALP--WVRYITQSGDYQLR 421
QVR++++ + A P WVR+++ S Y +R
Sbjct: 420 QVRFLRLAFRPCGNANPHKWVRHLSHSDAYVIR 452
>gi|21361863 stonin 2 [Homo sapiens]
Length = 905
Score = 73.6 bits (179), Expect = 3e-13
Identities = 72/304 (23%), Positives = 118/304 (38%), Gaps = 57/304 (18%)
Query: 163 GIKYKKNEVFIDVIESVNLLVN-ANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVL-- 219
G+ Y + E+ +DV + + +V+ + +L ++ I + FLSG+ E RLGLND ++
Sbjct: 563 GLNYLEEEITVDVRDEFSGIVSKGDNQILQHHVLTRIHILSFLSGLAECRLGLNDILVKG 622
Query: 220 ------FELTGRSKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDG-DFELMSYRLSTQ 272
++ + K ++L + +FH CV F N R I F P D FELM +R
Sbjct: 623 NEIVLRQDIMPTTTTKWIKLHECRFHGCVDEDVFHNSRVILFNPLDACRFELMRFRTVFA 682
Query: 273 VKPLIWIESVIEKFSHSRVEIM--------VKAKGQFKKQSVANGVEISVPVPSD----- 319
K L + + + VE+ A Q V I PVPS+
Sbjct: 683 EKTLPFTLRTATSVNGAEVEVQSWLRMSTGFSANRDPLTQVPCENVMIRYPVPSEWVKNF 742
Query: 320 ---------------------------ADSPRFKTSVGSAKYVPERNVVIWSIKSFP--- 349
P + ++G+AKY N ++W I P
Sbjct: 743 RRESVLGEKSLKAKVNRGASFGSTSVSGSEPVMRVTLGTAKYEHAFNSIVWRINRLPDKN 802
Query: 350 --GGKEYLMRAHFGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKIIEKSGYQALP 407
G + H L S + + V+F +P + S VR + + +K+ +
Sbjct: 803 SASGHPHCFFCHLELGSDREVPSRFANHVNVEFSMPTTSASKASVRSISVEDKTDVR--K 860
Query: 408 WVRY 411
WV Y
Sbjct: 861 WVNY 864
>gi|26787993 stonin 1 [Homo sapiens]
Length = 735
Score = 63.2 bits (152), Expect = 4e-10
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 57/286 (19%)
Query: 166 YKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGR 225
Y++ E+ ++++++ V G + S ++ I F++G E L LND EL R
Sbjct: 410 YEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLND---LELPKR 466
Query: 226 --------SKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDG-DFELMSYR--LSTQVK 274
S+ K +++ D FH+CV + F+ R I F+P D FELM ++ +
Sbjct: 467 DESYYEKDSEKKGIDILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNL 526
Query: 275 PLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVA------NGVEISVPVPSD--------- 319
P V+ + ++ ++ V ++ S A + + I PVPS
Sbjct: 527 PFSLKSVVVVQGAYVELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMN 586
Query: 320 -----------------------ADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLM 356
P + +VGSAKY V+W I P L
Sbjct: 587 LQRQKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLD 646
Query: 357 RAH-----FGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKI 397
H L S ++ + P V+F +P S +VR + +
Sbjct: 647 HPHCLSYKLELGSDQEIPSDWYPFATVQFSVPDTCASRTEVRSLGV 692
>gi|29553944 STON1-GTF2A1L protein [Homo sapiens]
Length = 1182
Score = 63.2 bits (152), Expect = 4e-10
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 57/286 (19%)
Query: 166 YKKNEVFIDVIESVNLLVNANGSVLLSEIVGTIKLKVFLSGMPELRLGLNDRVLFELTGR 225
Y++ E+ ++++++ V G + S ++ I F++G E L LND EL R
Sbjct: 410 YEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNGNLECFLTLND---LELPKR 466
Query: 226 --------SKNKSVELEDVKFHQCVRLSRFDNDRTISFIPPDG-DFELMSYR--LSTQVK 274
S+ K +++ D FH+CV + F+ R I F+P D FELM ++ +
Sbjct: 467 DESYYEKDSEKKGIDILDYHFHKCVNVQEFEQSRIIKFVPLDACRFELMRFKTLYNGDNL 526
Query: 275 PLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVA------NGVEISVPVPSD--------- 319
P V+ + ++ ++ V ++ S A + + I PVPS
Sbjct: 527 PFSLKSVVVVQGAYVELQAFVNMASLAQRSSYAGSLRSCDNIRIHFPVPSQWIKALWTMN 586
Query: 320 -----------------------ADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLM 356
P + +VGSAKY V+W I P L
Sbjct: 587 LQRQKSLKAKMNRRACLGSLQELESEPVIQVTVGSAKYESAYQAVVWKIDRLPDKNSSLD 646
Query: 357 RAH-----FGLPSVEKEEVEGRPPIGVKFEIPYFTVSGIQVRYMKI 397
H L S ++ + P V+F +P S +VR + +
Sbjct: 647 HPHCLSYKLELGSDQEIPSDWYPFATVQFSVPDTCASRTEVRSLGV 692
>gi|224451116 Mu-2 related death-inducing protein [Homo sapiens]
Length = 490
Score = 45.4 bits (106), Expect = 1e-04
Identities = 58/237 (24%), Positives = 91/237 (38%), Gaps = 42/237 (17%)
Query: 158 SWRSEGIKYKKNEVFIDVIESV-NLLVNANGSVLLSEIVGTIKLKVFLSG-MPELRLGLN 215
+W++ G K +V I + E V ++ + G ++VGT+ K L G MP + + L+
Sbjct: 197 AWKT-GTYKGKPQVSISITEKVKSMQYDKQGIADTWQVVGTVTCKCDLEGIMPNVTISLS 255
Query: 216 DRVLFELTGRSKNKSVELEDVKFHQCVRL----------------SRFDNDRTISFIPPD 259
L+D+ H CV S F F PP
Sbjct: 256 ----------LPTNGSPLQDILVHPCVTSLDSAILTSSSIDAMDDSAFSGPYKFPFTPPL 305
Query: 260 GDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEI-SVPVPS 318
F L Y V P++ + E+ R+ I +K +SV N E +P
Sbjct: 306 ESFNLCFYTSQVPVPPILGFYQMKEEEVQLRITINLKL-----HESVKNNFEFCEAHIPF 360
Query: 319 DADSP----RFKTSVGSAKYVPERNVVIWSI-KSFPGGKEYLM--RAHFGLPSVEKE 368
P +KTS G + E++++IW I + FP E + FG S EK+
Sbjct: 361 YNRGPITHLEYKTSFGQLEVFREKSLLIWIIGQKFPKSMEISLSGTVTFGAKSHEKQ 417
>gi|11863154 archain isoform 1 [Homo sapiens]
Length = 511
Score = 39.3 bits (90), Expect = 0.007
Identities = 27/129 (20%), Positives = 57/129 (44%), Gaps = 1/129 (0%)
Query: 13 GKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSNLYLVATTS 72
GK ++SR + ++ ++IE + + G + V +++ LY+V T+
Sbjct: 13 GKAIVSRQFV-EMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITT 71
Query: 73 KNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQ 132
KN+N L V EY + LEE I ++ + DE++ G+ + + ++
Sbjct: 72 KNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGYRENVNLAQIR 131
Query: 133 EYITQQSNK 141
+ S++
Sbjct: 132 TFTEMDSHE 140
>gi|189409104 adaptor-related protein complex 4, sigma 1 subunit
isoform 2 [Homo sapiens]
Length = 144
Score = 38.5 bits (88), Expect = 0.012
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 58 LWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDEL 117
++ +++ L++V + N +Y F++ +EV EYF + E I N V+ +LDE+
Sbjct: 58 IYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEM 117
Query: 118 MDFG-FPQTTDSKIL 131
+ G +T ++IL
Sbjct: 118 VLNGCIVETNRARIL 132
>gi|70906430 adaptor-related protein complex 2, sigma 1 subunit
isoform AP17 [Homo sapiens]
Length = 142
Score = 37.7 bits (86), Expect = 0.020
Identities = 22/83 (26%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Query: 58 LWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYELLDEL 117
++ +++ LY N N ++ +EV EYF + E + NF VY ++DE+
Sbjct: 58 IYRRYAGLYFCICVDVNDNNLAYLEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEM 117
Query: 118 MDFG-FPQTTDSKILQEYITQQS 139
G +T+ +K+L++ + QS
Sbjct: 118 FLAGEIRETSQTKVLKQLLMLQS 140
>gi|88703051 adaptor-related protein complex 1, sigma 3 subunit
[Homo sapiens]
Length = 154
Score = 36.6 bits (83), Expect = 0.044
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 54 QVHFLWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRDNFVIVYEL 113
++ ++ ++++LY N L +++ +E+ +YF + E I NF Y +
Sbjct: 54 ELKLVYKRYASLYFCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIFNFEKAYFI 113
Query: 114 LDELMDFGFPQTT----------DSKILQEYITQQSNK 141
LDE + G Q T DS +LQE + + NK
Sbjct: 114 LDEFIIGGEIQETSKKIAVKAIEDSDMLQETMEEYMNK 151
>gi|4557471 adaptor-related protein complex 1, sigma 1 subunit [Homo
sapiens]
Length = 158
Score = 35.0 bits (79), Expect = 0.13
Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
Query: 30 IEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSNLYLVATTSKNANASLVYSFLYKTIE 89
+ M +++ R+ + + L + ++ ++++LY N + +++ +E
Sbjct: 32 VRELMQVVLARKPK--MCSFLEWRDLKVVYKRYASLYFCCAIEGQDNELITLELIHRYVE 89
Query: 90 VFCEYFKELEEESIRDNFVIVYELLDELMDFGFPQTTDSKILQEYITQ 137
+ +YF + E I NF Y +LDE + G Q T K + + I Q
Sbjct: 90 LLDKYFGSVCELDIIFNFEKAYFILDEFLMGGDVQDTSKKSVLKAIEQ 137
>gi|22027655 adaptor-related protein complex 1 sigma 2 subunit [Homo
sapiens]
Length = 157
Score = 34.3 bits (77), Expect = 0.22
Identities = 21/92 (22%), Positives = 41/92 (44%)
Query: 46 LAPLLSHGQVHFLWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEEESIRD 105
+ L + ++ ++++LY N + +++ +E+ +YF + E I
Sbjct: 45 MCSFLEWRDLKIVYKRYASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIF 104
Query: 106 NFVIVYELLDELMDFGFPQTTDSKILQEYITQ 137
NF Y +LDE + G Q T K + + I Q
Sbjct: 105 NFEKAYFILDEFLLGGEVQETSKKNVLKAIEQ 136
>gi|63079709 apolipoprotein AV [Homo sapiens]
Length = 366
Score = 32.7 bits (73), Expect = 0.64
Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 9/97 (9%)
Query: 137 QQSNKLETGKSRVPPTVTNA---VSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSE 193
Q +LE K+R+ P + A V W EG++ + +D++E V L V L
Sbjct: 95 QLQEELEEVKARLQPYMAEAHELVGWNLEGLRQQLKPYTMDLMEQVALRVQELQEQL--R 152
Query: 194 IVGTIKLKVFLSGMPE---LRLGLNDRVLFELTGRSK 227
+VG L G+ E L GL RV+ TGR K
Sbjct: 153 VVGEDTKAQLLGGVDEAWALLQGLQSRVVHH-TGRFK 188
>gi|11038643 adaptor-related protein complex 2, sigma 1 subunit
isoform AP17delta [Homo sapiens]
Length = 104
Score = 32.0 bits (71), Expect = 1.1
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 88 IEVFCEYFKELEEESIRDNFVIVYELLDELMDFG-FPQTTDSKILQEYITQQS 139
+EV EYF + E + NF VY ++DE+ G +T+ +K+L++ + QS
Sbjct: 50 VEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQS 102
>gi|87159812 vacuolar H+ ATPase C2 isoform a [Homo sapiens]
Length = 427
Score = 31.6 bits (70), Expect = 1.4
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 280 ESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEIS 313
ES+I + + S VE+M +KG+ ++ +ANGV+++
Sbjct: 65 ESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLT 98
>gi|47717098 vacuolar H+ ATPase C2 isoform b [Homo sapiens]
Length = 381
Score = 31.6 bits (70), Expect = 1.4
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 280 ESVIEKFSHSRVEIMVKAKGQFKKQSVANGVEIS 313
ES+I + + S VE+M +KG+ ++ +ANGV+++
Sbjct: 65 ESLIRRMAQSVVEVMEDSKGKVQEHLLANGVDLT 98
>gi|7705983 coatomer protein complex, subunit zeta 2 [Homo sapiens]
Length = 210
Score = 30.8 bits (68), Expect = 2.4
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 4/159 (2%)
Query: 5 AVFILDVKGKPLISRNYKGDVAMSKIEHFMPLLVQREEEGALAPLLSHGQVHFLWIKHSN 64
AVFILD G+ L+++ Y K + V + + + G + ++ +
Sbjct: 48 AVFILDNDGRRLLAKYYDDTFPSMKEQMVFEKNVFNKTSRTESEIAFFGGMTIVYKNSID 107
Query: 65 LYLVATTSKNANASLVYSFLYKTIEVFCEYF-KELEEESIRDNFVIVYELLDELMDFGFP 123
L+L S N ++ S L E K +E+ + +N + +LDE++D G
Sbjct: 108 LFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFLVLDEIVDGGVI 167
Query: 124 QTTD-SKILQE--YITQQSNKLETGKSRVPPTVTNAVSW 159
+D +++Q+ + E ++V + + W
Sbjct: 168 LESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKW 206
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 30.8 bits (68), Expect = 2.4
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 302 KKQSVANGVEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHFG 361
++ +V + + P P ++P+F + G+ Y +RN V ++S P L + G
Sbjct: 1959 REVTVTERLLLDGPPPHSPETPQFPPTTGAVLYTVKRNQVGPEVRSCPKASPRLQKEREG 2018
Query: 362 LPSVEKEE 369
+V + E
Sbjct: 2019 QKAVSESE 2026
>gi|144227752 GRAM domain containing 1B [Homo sapiens]
Length = 738
Score = 30.8 bits (68), Expect = 2.4
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 12/74 (16%)
Query: 239 HQC----VRLSRFDNDRTISFIPPDGDFELMSYRLSTQVKPLIWIESVIEKFSHSRVEIM 294
HQC + L+ D D ++PPD DF M Y V+ V + S S +E
Sbjct: 219 HQCYGNELGLTSDDED----YVPPDDDFNTMGYCEEIPVEE----NEVNDSSSKSSIETK 270
Query: 295 VKAKGQFKKQSVAN 308
A Q K+S+ N
Sbjct: 271 PDASPQLPKKSITN 284
>gi|209180434 homeobox containing 1 [Homo sapiens]
Length = 420
Score = 30.4 bits (67), Expect = 3.2
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 137 QQSNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVG 196
+ + +L T ++ PT +A S ++ +E +DV + V L+ + SV+ EI
Sbjct: 120 ENNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEI-- 177
Query: 197 TIKLKVFLSGMPELRLGLNDRVLFELTGRSKNK 229
K FL+ ++ V+ ++TG S+++
Sbjct: 178 ----KAFLANR-----RISQAVVAQVTGISQSR 201
>gi|47059040 homeobox containing 1 [Homo sapiens]
Length = 420
Score = 30.4 bits (67), Expect = 3.2
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 137 QQSNKLETGKSRVPPTVTNAVSWRSEGIKYKKNEVFIDVIESVNLLVNANGSVLLSEIVG 196
+ + +L T ++ PT +A S ++ +E +DV + V L+ + SV+ EI
Sbjct: 120 ENNERLSTSNGKMSPTRYHANSMGQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEI-- 177
Query: 197 TIKLKVFLSGMPELRLGLNDRVLFELTGRSKNK 229
K FL+ ++ V+ ++TG S+++
Sbjct: 178 ----KAFLANR-----RISQAVVAQVTGISQSR 201
>gi|21361394 adaptor-related protein complex 4, sigma 1 subunit
isoform 1 [Homo sapiens]
Length = 159
Score = 30.4 bits (67), Expect = 3.2
Identities = 11/43 (25%), Positives = 24/43 (55%)
Query: 58 LWIKHSNLYLVATTSKNANASLVYSFLYKTIEVFCEYFKELEE 100
++ +++ L++V + N +Y F++ +EV EYF + E
Sbjct: 58 IYRQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSE 100
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,194,370
Number of Sequences: 37866
Number of extensions: 659951
Number of successful extensions: 1432
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1365
Number of HSP's gapped (non-prelim): 39
length of query: 423
length of database: 18,247,518
effective HSP length: 105
effective length of query: 318
effective length of database: 14,271,588
effective search space: 4538364984
effective search space used: 4538364984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.