Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 90903247
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|90903247 CD200 antigen isoform a precursor [Homo sapiens]
(269 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|90903247 CD200 antigen isoform a precursor [Homo sapiens] 546 e-156
gi|90903245 CD200 antigen isoform b [Homo sapiens] 538 e-153
gi|11386199 poliovirus receptor-related 3 [Homo sapiens] 73 3e-13
gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens] 69 4e-12
gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens] 69 4e-12
gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens] 69 4e-12
gi|5360210 poliovirus receptor related 2 isoform alpha precursor... 55 8e-08
gi|112789532 poliovirus receptor related 2 isoform delta precurs... 55 8e-08
gi|209413732 poliovirus receptor isoform delta [Homo sapiens] 54 1e-07
gi|209413730 poliovirus receptor isoform gamma [Homo sapiens] 54 1e-07
gi|209413728 poliovirus receptor isoform beta [Homo sapiens] 54 1e-07
gi|209413726 poliovirus receptor isoform alpha [Homo sapiens] 54 1e-07
gi|222136611 poliovirus receptor-related 4 [Homo sapiens] 54 1e-07
gi|27477039 inducible T-cell co-stimulator ligand [Homo sapiens] 42 4e-04
gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens] 41 0.001
gi|139948432 adlican [Homo sapiens] 41 0.001
gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens] 41 0.001
gi|190014605 programmed cell death 1 ligand 2 [Homo sapiens] 40 0.003
gi|51593098 class-I MHC-restricted T cell associated molecule [H... 40 0.003
gi|110431348 deleted in colorectal carcinoma [Homo sapiens] 39 0.004
gi|118572606 hemicentin 1 [Homo sapiens] 39 0.005
gi|19743806 roundabout 1 isoform b [Homo sapiens] 39 0.006
gi|67188443 CD276 antigen isoform a [Homo sapiens] 39 0.006
gi|4506569 roundabout 1 isoform a [Homo sapiens] 39 0.006
gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens] 39 0.006
gi|51317373 netrin-G1 ligand [Homo sapiens] 39 0.006
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur... 39 0.006
gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2 precu... 39 0.006
gi|33519481 neural cell adhesion molecule 2 precursor [Homo sapi... 38 0.008
gi|221316762 neurotrimin isoform 4 [Homo sapiens] 38 0.011
>gi|90903247 CD200 antigen isoform a precursor [Homo sapiens]
Length = 269
Score = 546 bits (1406), Expect = e-156
Identities = 269/269 (100%), Positives = 269/269 (100%)
Query: 1 MERLVIRMPFSHLSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEAL 60
MERLVIRMPFSHLSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEAL
Sbjct: 1 MERLVIRMPFSHLSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEAL 60
Query: 61 IVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYM 120
IVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYM
Sbjct: 61 IVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYM 120
Query: 121 CLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIE 180
CLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIE
Sbjct: 121 CLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIE 180
Query: 181 NSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQTVNKGYWFSVPLL 240
NSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQTVNKGYWFSVPLL
Sbjct: 181 NSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQTVNKGYWFSVPLL 240
Query: 241 LSIVSLVILLVLISILLYWKRHRNQDREP 269
LSIVSLVILLVLISILLYWKRHRNQDREP
Sbjct: 241 LSIVSLVILLVLISILLYWKRHRNQDREP 269
>gi|90903245 CD200 antigen isoform b [Homo sapiens]
Length = 294
Score = 538 bits (1387), Expect = e-153
Identities = 265/265 (100%), Positives = 265/265 (100%)
Query: 5 VIRMPFSHLSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEALIVTW 64
VIRMPFSHLSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEALIVTW
Sbjct: 30 VIRMPFSHLSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEALIVTW 89
Query: 65 QKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYMCLFN 124
QKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYMCLFN
Sbjct: 90 QKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYMCLFN 149
Query: 125 TFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIENSTV 184
TFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIENSTV
Sbjct: 150 TFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIENSTV 209
Query: 185 TLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQTVNKGYWFSVPLLLSIV 244
TLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQTVNKGYWFSVPLLLSIV
Sbjct: 210 TLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQTVNKGYWFSVPLLLSIV 269
Query: 245 SLVILLVLISILLYWKRHRNQDREP 269
SLVILLVLISILLYWKRHRNQDREP
Sbjct: 270 SLVILLVLISILLYWKRHRNQDREP 294
>gi|11386199 poliovirus receptor-related 3 [Homo sapiens]
Length = 549
Score = 72.8 bits (177), Expect = 3e-13
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 9/186 (4%)
Query: 48 SLKCSLQNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTIT 107
SLKC ++ + ++W+K S + + +G +Q Y+ ++ L ++TIT
Sbjct: 75 SLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATIT 134
Query: 108 FWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHY-------KFSEDHLNITC 160
NI D G Y+C TF G + +TV V+P VSL +E I
Sbjct: 135 LHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICI 194
Query: 161 SATARPAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLG 220
+AT +P + W+ +E++T S PN T ++ S + + G+ + C V H
Sbjct: 195 AATGKPVAHIDWEGDLGEMESTTT--SFPNETATIISQYKLFPTRFARGRRITCVVKHPA 252
Query: 221 TVTDFK 226
D +
Sbjct: 253 LEKDIR 258
>gi|42560233 poliovirus receptor-related 1 isoform 3 [Homo sapiens]
Length = 352
Score = 68.9 bits (167), Expect = 4e-12
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 45 TPASLKCSLQNAQEALI---VTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGL 101
T L CS N ++ VTWQK S +N+ ++ + GV + Y++++ +
Sbjct: 45 TDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSF 104
Query: 102 QNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPI-------VSLHYKFSED 154
+ TI + LEDEG Y+C F TF G LTV +P L K +D
Sbjct: 105 TDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQD 164
Query: 155 H--LNITC-SATARPAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKE 211
L TC SA +P +V W+ G E + +PNGT +V S + + +
Sbjct: 165 DKVLVATCTSANGKPPSVVSWETRLKG-EAEYQEIRNPNGTVTVISRYRLVPSREAHQQS 223
Query: 212 VICQV 216
+ C V
Sbjct: 224 LACIV 228
>gi|42560231 poliovirus receptor-related 1 isoform 2 [Homo sapiens]
Length = 458
Score = 68.9 bits (167), Expect = 4e-12
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 45 TPASLKCSLQNAQEALI---VTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGL 101
T L CS N ++ VTWQK S +N+ ++ + GV + Y++++ +
Sbjct: 45 TDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSF 104
Query: 102 QNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPI-------VSLHYKFSED 154
+ TI + LEDEG Y+C F TF G LTV +P L K +D
Sbjct: 105 TDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQD 164
Query: 155 H--LNITC-SATARPAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKE 211
L TC SA +P +V W+ G E + +PNGT +V S + + +
Sbjct: 165 DKVLVATCTSANGKPPSVVSWETRLKG-EAEYQEIRNPNGTVTVISRYRLVPSREAHQQS 223
Query: 212 VICQV 216
+ C V
Sbjct: 224 LACIV 228
>gi|42560237 poliovirus receptor-related 1 isoform 1 [Homo sapiens]
Length = 517
Score = 68.9 bits (167), Expect = 4e-12
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 14/185 (7%)
Query: 45 TPASLKCSLQNAQEALI---VTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGL 101
T L CS N ++ VTWQK S +N+ ++ + GV + Y++++ +
Sbjct: 45 TDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSF 104
Query: 102 QNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPI-------VSLHYKFSED 154
+ TI + LEDEG Y+C F TF G LTV +P L K +D
Sbjct: 105 TDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQD 164
Query: 155 H--LNITC-SATARPAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKE 211
L TC SA +P +V W+ G E + +PNGT +V S + + +
Sbjct: 165 DKVLVATCTSANGKPPSVVSWETRLKG-EAEYQEIRNPNGTVTVISRYRLVPSREAHQQS 223
Query: 212 VICQV 216
+ C V
Sbjct: 224 LACIV 228
>gi|5360210 poliovirus receptor related 2 isoform alpha precursor
[Homo sapiens]
Length = 479
Score = 54.7 bits (130), Expect = 8e-08
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 25/226 (11%)
Query: 18 LVWVMAAVVLCTAQVQ----VVTQDEREQLYTPASLKCSLQNAQEAL---IVTWQKKKA- 69
L+W + ++L Q V + R QL L C L L +VTWQ+ A
Sbjct: 17 LLWPLLLLLLLETGAQDVRVQVLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAP 76
Query: 70 VSPENMVTFSENHG------------VVIQPAYKDKINITQLGLQNSTITFWNITLEDEG 117
+ +N+ F G + A + T+ LQ++T+ +T+EDEG
Sbjct: 77 ANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQDATLALHGLTVEDEG 136
Query: 118 CYMCLFNTFGFGKISGTACLTVYVQP---IVSLHYKFSEDHLNIT--CSATARPAPMVFW 172
Y C F TF G + G L V +P + FS+D + S RP + W
Sbjct: 137 NYTCEFATFPKGSVRGMTWLRVIAKPKNQAEAQKVTFSQDPTTVALCISKEGRPPARISW 196
Query: 173 KVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLH 218
T GT +VTS + G V C+V H
Sbjct: 197 LSSLDWEAKETQVSGTLAGTVTVTSRFTLVPSGRADGVTVTCKVEH 242
>gi|112789532 poliovirus receptor related 2 isoform delta precursor
[Homo sapiens]
Length = 538
Score = 54.7 bits (130), Expect = 8e-08
Identities = 58/226 (25%), Positives = 85/226 (37%), Gaps = 25/226 (11%)
Query: 18 LVWVMAAVVLCTAQVQ----VVTQDEREQLYTPASLKCSLQNAQEAL---IVTWQKKKA- 69
L+W + ++L Q V + R QL L C L L +VTWQ+ A
Sbjct: 17 LLWPLLLLLLLETGAQDVRVQVLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAP 76
Query: 70 VSPENMVTFSENHG------------VVIQPAYKDKINITQLGLQNSTITFWNITLEDEG 117
+ +N+ F G + A + T+ LQ++T+ +T+EDEG
Sbjct: 77 ANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEAELQDATLALHGLTVEDEG 136
Query: 118 CYMCLFNTFGFGKISGTACLTVYVQP---IVSLHYKFSEDHLNIT--CSATARPAPMVFW 172
Y C F TF G + G L V +P + FS+D + S RP + W
Sbjct: 137 NYTCEFATFPKGSVRGMTWLRVIAKPKNQAEAQKVTFSQDPTTVALCISKEGRPPARISW 196
Query: 173 KVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLH 218
T GT +VTS + G V C+V H
Sbjct: 197 LSSLDWEAKETQVSGTLAGTVTVTSRFTLVPSGRADGVTVTCKVEH 242
>gi|209413732 poliovirus receptor isoform delta [Homo sapiens]
Length = 392
Score = 54.3 bits (129), Expect = 1e-07
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 74 NMVTFSENHGVVIQPAYKDKINITQLG--LQNSTITFWNITLEDEGCYMCLFNTFGFGKI 131
+M F + G + + + +LG L+N+++ + + +EDEG Y CLF TF G
Sbjct: 74 SMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSR 133
Query: 132 SGTACLTVYVQP-----IVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIENSTVTL 186
S L V +P + + + S RP + W G+ N++
Sbjct: 134 SVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVP 193
Query: 187 SHPNGTTSVTSILHIKDPKNQV-GKEVICQVLH 218
+GT +VTS L I P +QV GK V C+V H
Sbjct: 194 GFLSGTVTVTS-LWILVPSSQVDGKNVTCKVEH 225
>gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]
Length = 364
Score = 54.3 bits (129), Expect = 1e-07
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 74 NMVTFSENHGVVIQPAYKDKINITQLG--LQNSTITFWNITLEDEGCYMCLFNTFGFGKI 131
+M F + G + + + +LG L+N+++ + + +EDEG Y CLF TF G
Sbjct: 74 SMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSR 133
Query: 132 SGTACLTVYVQP-----IVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIENSTVTL 186
S L V +P + + + S RP + W G+ N++
Sbjct: 134 SVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVP 193
Query: 187 SHPNGTTSVTSILHIKDPKNQV-GKEVICQVLH 218
+GT +VTS L I P +QV GK V C+V H
Sbjct: 194 GFLSGTVTVTS-LWILVPSSQVDGKNVTCKVEH 225
>gi|209413728 poliovirus receptor isoform beta [Homo sapiens]
Length = 372
Score = 54.3 bits (129), Expect = 1e-07
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 74 NMVTFSENHGVVIQPAYKDKINITQLG--LQNSTITFWNITLEDEGCYMCLFNTFGFGKI 131
+M F + G + + + +LG L+N+++ + + +EDEG Y CLF TF G
Sbjct: 74 SMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSR 133
Query: 132 SGTACLTVYVQP-----IVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIENSTVTL 186
S L V +P + + + S RP + W G+ N++
Sbjct: 134 SVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVP 193
Query: 187 SHPNGTTSVTSILHIKDPKNQV-GKEVICQVLH 218
+GT +VTS L I P +QV GK V C+V H
Sbjct: 194 GFLSGTVTVTS-LWILVPSSQVDGKNVTCKVEH 225
>gi|209413726 poliovirus receptor isoform alpha [Homo sapiens]
Length = 417
Score = 54.3 bits (129), Expect = 1e-07
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 74 NMVTFSENHGVVIQPAYKDKINITQLG--LQNSTITFWNITLEDEGCYMCLFNTFGFGKI 131
+M F + G + + + +LG L+N+++ + + +EDEG Y CLF TF G
Sbjct: 74 SMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTFPQGSR 133
Query: 132 SGTACLTVYVQP-----IVSLHYKFSEDHLNITCSATARPAPMVFWKVPRSGIENSTVTL 186
S L V +P + + + S RP + W G+ N++
Sbjct: 134 SVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVP 193
Query: 187 SHPNGTTSVTSILHIKDPKNQV-GKEVICQVLH 218
+GT +VTS L I P +QV GK V C+V H
Sbjct: 194 GFLSGTVTVTS-LWILVPSSQVDGKNVTCKVEH 225
>gi|222136611 poliovirus receptor-related 4 [Homo sapiens]
Length = 510
Score = 53.9 bits (128), Expect = 1e-07
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 10/175 (5%)
Query: 62 VTWQKKKA-VSPENMVTFSENHGVVIQPAYKDKINITQLGLQ--NSTITFWNITLEDEGC 118
V W + A + + +G+ + PAY+ ++ + ++ N DEG
Sbjct: 65 VAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQADEGE 124
Query: 119 YMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDH-----LNITCSATARPAPMVFWK 173
Y C +TF G L V V P+ SL+ + + L +C+A PAP V W
Sbjct: 125 YECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWD 184
Query: 174 VPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQT 228
G +S + H + + +VTS H+ ++ G+ + C V H G + D + T
Sbjct: 185 TEVKGTTSSR-SFKH-SRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRIT 237
>gi|27477039 inducible T-cell co-stimulator ligand [Homo sapiens]
Length = 302
Score = 42.4 bits (98), Expect = 4e-04
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 45/236 (19%)
Query: 54 QNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNS--TITFWNI 111
Q ++ +VT+ + S EN + Y+++ ++ G+ ++ +N+
Sbjct: 55 QTSESKTVVTYHIPQNSSLEN-----------VDSRYRNRALMSPAGMLRGDFSLRLFNV 103
Query: 112 TLEDEGCYMCLF--NTFGFGKISGTACLTVYVQ-----PIVSLHYKFSEDHLNITC-SAT 163
T +DE + CL + GF ++ +T++V P+VS + S+D L TC S
Sbjct: 104 TPQDEQKFHCLVLSQSLGFQEVLSVE-VTLHVAANFSVPVVSAPHSPSQDELTFTCTSIN 162
Query: 164 ARPAPMVFW--KVPRS----GIENSTVTLSHPNGTTSVTSILHI-KDPKNQVG----KEV 212
P P V+W K S ++N TV L + G V S+L I + P +G +
Sbjct: 163 GYPRPNVYWINKTDNSLLDQALQNDTVFL-NMRGLYDVVSVLRIARTPSVNIGCCIENVL 221
Query: 213 ICQVLHLGTVTD---------FKQTVNKGYWFSVPLLLSIVSLVILLVLISILLYW 259
+ Q L +G+ T + V+ G SI++++ LLV++++ + W
Sbjct: 222 LQQNLTVGSQTGNDIGERDKITENPVSTGE--KNAATWSILAVLCLLVVVAVAIGW 275
>gi|5031561 transmembrane glycoprotein A33 precursor [Homo sapiens]
Length = 319
Score = 41.2 bits (95), Expect = 0.001
Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 33/272 (12%)
Query: 16 YSLVWVMAAVVLCTAQVQVVTQDE--REQLYTPASLKCSLQNAQEAL--IVTWQKKKAVS 71
+ ++W + AV + + V T + R +L C+ + + ++ W K
Sbjct: 6 WPVLWTLCAVRVTVDAISVETPQDVLRASQGKSVTLPCTYHTSTSSREGLIQWDKLLLTH 65
Query: 72 PENMVTFS-ENHGVVIQPAYKDKINITQLGLQN-STITFWNITLEDEGCYMCLFNTFG-- 127
E +V + N + YK++++I+ Q+ ++IT +T+ D G Y C +
Sbjct: 66 TERVVIWPFSNKNYIHGELYKNRVSISNNAEQSDASITIDQLTMADNGTYECSVSLMSDL 125
Query: 128 FGKISGTACLTVYVQPIVSLHYKFSE----DHLNITC-SATARPAPMVFWKVPRSGIENS 182
G L V V P E +++ +TC S P P WK R I N
Sbjct: 126 EGNTKSRVRLLVLVPPSKPECGIEGETIIGNNIQLTCQSKEGSPTPQYSWK--RYNILNQ 183
Query: 183 TVTLSHP--------NGTTSVTSILHIKDPKNQVGKEVICQVLHLGTVTDFKQTVNKGYW 234
L+ P ++ TS +I N+ G + C + TV ++N +
Sbjct: 184 EQPLAQPASGQPVSLKNISTDTSGYYICTSSNEEGTQ-FCNI----TVAVRSPSMNVALY 238
Query: 235 FSVPLLLSIVSLVILLVLISILLYWKRHRNQD 266
+ V +V L++I I++Y R +D
Sbjct: 239 VGI-----AVGVVAALIIIGIIIYCCCCRGKD 265
>gi|139948432 adlican [Homo sapiens]
Length = 2828
Score = 41.2 bits (95), Expect = 0.001
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 101 LQNSTITFWNITLEDEGCYMC-LFNTFGFGKISGTACLTVYVQPIVSLHYK----FSEDH 155
L+N T+ + ++D G YMC N G ++ +TV I++ HY+ + D
Sbjct: 1908 LKNGTLVIRKVQVQDRGQYMCTASNLHGLDRMVVLLSVTVQQPQILASHYQDVTVYLGDT 1967
Query: 156 LNITCSATARPAPMVFWKVPRSGIENST------VTLSHPNGTTSV 195
+ + C A PAP + W P + + +TL H N T S+
Sbjct: 1968 IAMECLAKGTPAPQISWIFPDRRVWQTVSPVEGRITL-HENRTLSI 2012
Score = 36.2 bits (82), Expect = 0.031
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
Query: 103 NSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDH------- 155
N T+ ++T +D G Y+C+ G + V ++P + +K DH
Sbjct: 2203 NGTLVVKSVTDKDAGDYLCVARN-KVGDDYVVLKVDVVMKP-AKIEHKEENDHKVFYGGD 2260
Query: 156 LNITCSATARPAPMVFWKVPRSGIENSTVTLSHPNGTT 193
L + C AT P P + W +P + NS + G T
Sbjct: 2261 LKVDCVATGLPNPEISWSLPDGSLVNSFMQSDDSGGRT 2298
Score = 30.0 bits (66), Expect = 2.2
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 154 DHLNITCSATARPAPMVFWKVPRSGIENSTVTLSH----PNGTTSVTSI 198
+ + + C+A A P + W +P I N SH PNGT S+ +
Sbjct: 593 ESVTLPCNALAIPEAHLSWILPNRRIINDLANTSHVYMLPNGTLSIPKV 641
Score = 28.9 bits (63), Expect = 4.9
Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Query: 101 LQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVS-----LHYKFSEDH 155
L N T+T ++ D G Y+C T ++ + + P ++ + Y +
Sbjct: 2691 LDNGTLTVREASVFDRGTYVCRMETEYGPSVTSIPVIVIAYPPRITSEPTPVIYTRPGNT 2750
Query: 156 LNITCSATARPAPMVFWKVP-----RSGIENSTV--TLSHPNGTTSV 195
+ + C A P + W++P ++G++ HP G+ ++
Sbjct: 2751 VKLNCMAMGIPKADITWELPDKSHLKAGVQARLYGNRFLHPQGSLTI 2797
Score = 28.5 bits (62), Expect = 6.4
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 7/83 (8%)
Query: 103 NSTITFWNITLEDEGCYMCLF-NTFGFGKISG-----TACLTVYVQPIVSLHYKFSEDHL 156
N T+ F + + +EG Y C N G ++ TA T+ + +++ + D +
Sbjct: 2306 NGTLYFNEVGMREEGDYTCFAENQVGKDEMRVRVKVVTAPATIRNKTYLAVQVPYG-DVV 2364
Query: 157 NITCSATARPAPMVFWKVPRSGI 179
+ C A P P V W P + +
Sbjct: 2365 TVACEAKGEPMPKVTWLSPTNKV 2387
>gi|38490688 immunoglobulin superfamily, member 10 [Homo sapiens]
Length = 2623
Score = 40.8 bits (94), Expect = 0.001
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 53 LQNAQEALIVTWQKKKAV------SPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTI 106
L+ ++ ++ TW + + +P+ V + + G ++P N N T+
Sbjct: 1845 LEQRRQVIVGTWGESLKLPCTAKGTPQPSVYWVLSDGTEVKPL--QFTNSKLFLFSNGTL 1902
Query: 107 TFWNITLEDEGCYMCLFNTFGFGKISGTACLT----VYVQPIVSLHYKFSE----DHLNI 158
N+ D G Y C+ T G LT V I + K +E D L +
Sbjct: 1903 YIRNLASSDRGTYECIA-TSSTGSERRVVMLTMEERVTSPRIEAASQKRTEVNFGDKLLL 1961
Query: 159 TCSATARPAPMVFWKVPRSGIENSTVTLS-----HPNGTTSVTSI------LHIKDPKNQ 207
CSAT P P + W++P + + + +PNG+ + S+ +++ +N+
Sbjct: 1962 NCSATGEPKPQIMWRLPSKAVVDQQHRVGSWIHVYPNGSLFIGSVTEKDSGVYLCVARNK 2021
Query: 208 VGKEVI 213
+G ++I
Sbjct: 2022 MGDDLI 2027
Score = 37.7 bits (86), Expect = 0.011
Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 91 KDKINITQLGLQNSTITFWNITLEDEGCYMC-LFNTFGFGKISGTACLTVYVQPIVSLHY 149
K K N L N T++ + ++D G Y+C N FG + T + Y I+
Sbjct: 1693 KRKQNSRVQVLPNGTLSIQRVEIQDRGQYLCSASNLFGTDHLHVTLSVVSYPPRILERRT 1752
Query: 150 K----FSEDHLNITCSATARPAPMVFWKVPRSGIENSTVTLSHPNG------TTSVTSIL 199
K S + + C A RP+P V W + N TV G T T +L
Sbjct: 1753 KEITVHSGSTVELKCRAEGRPSPTVTWI-----LANQTVVSESSQGSRQAVVTVDGTLVL 1807
Query: 200 H 200
H
Sbjct: 1808 H 1808
Score = 32.7 bits (73), Expect = 0.34
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 103 NSTITFWNITLEDEGCYMCLF-NTFGFGKISGTACLTVYVQPIVSLHYKFSE-----DHL 156
N T+ F + + +EG Y C NT G ++ + P + K ++ D
Sbjct: 2101 NGTLYFNKVGVAEEGDYTCYAQNTLGKDEMK-VHLTVITAAPRIRQSNKTNKRIKAGDTA 2159
Query: 157 NITCSATARPAPMVFWKVPRSGIENSTVT--LSHPNGTTSVTSI 198
+ C T P P +FW +P + + + ++ H NG+ ++ +
Sbjct: 2160 VLDCEVTGDPKPKIFWLLPSNDMISFSIDRYTFHANGSLTINKV 2203
Score = 31.6 bits (70), Expect = 0.76
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 103 NSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFS------EDHL 156
+ T+ N+++ D G Y C+ + G G+ S + V P V L + + L
Sbjct: 1802 DGTLVLHNLSIYDRGFYKCVASNPG-GQDSLLVKIQVIAAPPVILEQRRQVIVGTWGESL 1860
Query: 157 NITCSATARPAPMVFW 172
+ C+A P P V+W
Sbjct: 1861 KLPCTAKGTPQPSVYW 1876
Score = 30.8 bits (68), Expect = 1.3
Identities = 34/152 (22%), Positives = 56/152 (36%), Gaps = 23/152 (15%)
Query: 71 SPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYMCLFNTFGFGK 130
SPE M +N + P Y +I + + N T+ N+ L D ++C+ G
Sbjct: 2268 SPEVMWIMPDNI-FLTAPYYGSRITVHK----NGTLEIRNVRLSDSADFICVARNEG--- 2319
Query: 131 ISGTACLTVYVQPIVSLHYKFSEDHLN------------ITCSATARPAPMVFWKVPRSG 178
G + L V ++ + L + N + CS P P + W +P +G
Sbjct: 2320 --GESVLVVQLEVLEMLRRPTFRNPFNEKIVAQLGKSTALNCSVDGNPPPEIIWILP-NG 2376
Query: 179 IENSTVTLSHPNGTTSVTSILHIKDPKNQVGK 210
S S+ S S + K + GK
Sbjct: 2377 TRFSNGPQSYQYLIASNGSFIISKTTREDAGK 2408
Score = 28.1 bits (61), Expect = 8.4
Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 103 NSTITFWNITLEDEGCYMCLF-NTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLN---- 157
N ++ ++T +D G Y+C+ N G I L + I Y F + L+
Sbjct: 1998 NGSLFIGSVTEKDSGVYLCVARNKMGDDLILMHVSLRLKPAKIDHKQY-FRKQVLHGKDF 2056
Query: 158 -ITCSATARPAPMVFWKVPRSGIENSTV 184
+ C A+ P P + W +P + N+ +
Sbjct: 2057 QVDCKASGSPVPEISWSLPDGTMINNAM 2084
>gi|190014605 programmed cell death 1 ligand 2 [Homo sapiens]
Length = 273
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/116 (27%), Positives = 45/116 (38%), Gaps = 18/116 (15%)
Query: 98 QLGLQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHL- 156
QL L ++ + + DEG Y C+ I G A Y+ V Y+ H+
Sbjct: 79 QLPLGKASFHIPQVQVRDEGQYQCII-------IYGVAWDYKYLTLKVKASYRKINTHIL 131
Query: 157 --------NITCSATARPAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDP 204
+TC AT P V W P + +T P G VTS+L +K P
Sbjct: 132 KVPETDEVELTCQATGYPLAEVSW--PNVSVPANTSHSRTPEGLYQVTSVLRLKPP 185
>gi|51593098 class-I MHC-restricted T cell associated molecule [Homo
sapiens]
Length = 393
Score = 39.7 bits (91), Expect = 0.003
Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 18 LVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEALIVTWQKKKAVSPENMVT 77
L W T + +T +E + L +LKC + + ++ + W ++P
Sbjct: 9 LAWFPLQEASLTNHTETITVEEGQTL----TLKC-VTSLRKNSSLQW-----LTPSGFTI 58
Query: 78 FSENHGVVIQPAYKD-KINITQLGLQNSTITFWNITLEDEGCYMCL-FNTFGFGKISGTA 135
F + PA K+ K + +IT N+TL+DEG Y CL ++ K
Sbjct: 59 FLNEY-----PALKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSDSVSTKEVKVI 113
Query: 136 CLTVYVQPIVS---LHYKFSEDHLNITCSA-TARPAPMVFWKVPRS-GIENSTVTLSHPN 190
L +PI+ + + E+H+ + CS ++P P + W + S + T+ +
Sbjct: 114 VLATPFKPILEASVIRKQNGEEHVVLMCSTMRSKPPPQITWLLGNSMEVSGGTLHEFETD 173
Query: 191 G---TTSVTSILHIKDPKNQVGKEVICQVLHLG 220
G T+ T I+H + V C + H G
Sbjct: 174 GKKCNTTSTLIIHTYGKNSTVD----CIIRHRG 202
>gi|110431348 deleted in colorectal carcinoma [Homo sapiens]
Length = 1447
Score = 39.3 bits (90), Expect = 0.004
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 101 LQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLH----YKFSEDHL 156
L S + N+T +D G Y C+ T+ IS +A LTV V P H Y + +
Sbjct: 290 LGGSNLLISNVTDDDSGMYTCVV-TYKNENISASAELTVLVPPWFLNHPSNLYAYESMDI 348
Query: 157 NITCSATARPAPMVFW 172
C+ + +P P V W
Sbjct: 349 EFECTVSGKPVPTVNW 364
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 38.9 bits (89), Expect = 0.005
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 11/70 (15%)
Query: 110 NITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPI-------VSLHYKFSEDHLNITCSA 162
N+ LED G Y C+ N G+ + T LTV+V P VSL+ + L ++C A
Sbjct: 4228 NVVLEDSGFYTCVANN-AAGEDTHTVSLTVHVLPTFTELPGDVSLN---KGEQLRLSCKA 4283
Query: 163 TARPAPMVFW 172
T P P + W
Sbjct: 4284 TGIPLPKLTW 4293
Score = 38.1 bits (87), Expect = 0.008
Identities = 46/183 (25%), Positives = 74/183 (40%), Gaps = 29/183 (15%)
Query: 38 DEREQLYTPASLKCSLQNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINIT 97
D ++ + +L C +Q E I W++ +NM FS V +I+
Sbjct: 801 DVSMEIGSNVTLPCYVQGYPEPTI-KWRRL-----DNMPIFSRPFSVS---------SIS 845
Query: 98 QLGLQNSTITFWNITLEDEGCYMC-LFNTFGFGKISGTACLTVYVQPIVSLHYKFSE--- 153
QL + + N+ D+G Y+C N FG + T +T V P++ + +
Sbjct: 846 QL--RTGALFILNLWASDKGTYICEAENQFGKIQSETTVTVTGLVAPLIGISPSVANVIE 903
Query: 154 -DHLNITCSATA-RPAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKE 211
L + C+ A P P W I+NS + L +P T LHI+ + Q G E
Sbjct: 904 GQQLTLPCTLLAGNPIPERRW------IKNSAMLLQNPYITVRSDGSLHIERVQLQDGGE 957
Query: 212 VIC 214
C
Sbjct: 958 YTC 960
Score = 35.8 bits (81), Expect = 0.040
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 101 LQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSE----DHL 156
L N ++ ++ D G Y C+ ++ G G + + LTV P V++ K +
Sbjct: 571 LANLSLELKSVKFNDAGEYHCMVSSEG-GSSAASVFLTVQEPPKVTVMPKNQSFTGGSEV 629
Query: 157 NITCSATARPAPMVFWKV 174
+I CSAT P P + W V
Sbjct: 630 SIMCSATGYPKPKIAWTV 647
Score = 35.8 bits (81), Expect = 0.040
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 18/151 (11%)
Query: 43 LYTPASLK------CSLQNAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINI 96
+Y P S+K S+ N +E V+ + + P ++T+ +N ++ + + + +
Sbjct: 3052 VYVPPSIKDHDSESLSVVNVREGTSVSLECESNAVPPPVITWYKNGRMITESTHVEILAD 3111
Query: 97 TQLGLQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVS-----LHYKF 151
Q+ + + D G Y+C G+ L VYV P + + +
Sbjct: 3112 GQM------LHIKKAEVSDTGQYVCRAINVA-GRDDKNFHLNVYVPPSIEGPEREVIVET 3164
Query: 152 SEDHLNITCSATARPAPMVFWKVPRSGIENS 182
+ + +TC AT P P + W IENS
Sbjct: 3165 ISNPVTLTCDATGIPPPTIAWLKNHKRIENS 3195
Score = 35.4 bits (80), Expect = 0.053
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 61 IVTWQKK-KAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCY 119
I+TW K+ + +SP FS H + P+ KI T+ D G Y
Sbjct: 1110 IITWAKETQLISP-----FSPRHTFL--PSGSMKITETRTS--------------DSGMY 1148
Query: 120 MCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSE----DHLNITCSATARPAPMVFW-KV 174
+C+ G ++ L V+V P + K + ++I C+A P P++ W K
Sbjct: 1149 LCVATNIA-GNVTQAVKLNVHVPPKIQRGPKHLKVQVGQRVDIPCNAQGTPLPVITWSKG 1207
Query: 175 PRSGIENSTVTLSHPNGTTSV 195
+ + + +S+P+GT S+
Sbjct: 1208 GSTMLVDGEHHVSNPDGTLSI 1228
Score = 32.3 bits (72), Expect = 0.44
Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
Query: 96 ITQLGLQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDH 155
I QLG N ++ + ED G Y C+ T G + + LT+ PI++L E
Sbjct: 4396 IRQLG--NGSLAIYGTVNEDAGDYTCVA-TNEAGVVERSMSLTLQSPPIITLEPV--ETV 4450
Query: 156 LN------ITCSATARPAPMVFW 172
+N + C AT P P + W
Sbjct: 4451 INAGGKIILNCQATGEPQPTITW 4473
Score = 31.2 bits (69), Expect = 0.99
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 8/82 (9%)
Query: 98 QLGLQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSED--- 154
++ ST+ + D G Y C+ T G+ L VYV P + + +E
Sbjct: 3296 RVSANGSTLNIYGALTSDTGKYTCVA-TNPAGEEDRIFNLNVYVTPTIRGNKDEAEKLMT 3354
Query: 155 ----HLNITCSATARPAPMVFW 172
+NI C AT P P + W
Sbjct: 3355 LVDTSINIECRATGTPPPQINW 3376
Score = 30.4 bits (67), Expect = 1.7
Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 10/108 (9%)
Query: 111 ITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSED----HLNITCSATARP 166
+ L+D G Y C+ + G + T + V+V P + + + + C A+ P
Sbjct: 950 VQLQDGGEYTCVASNVA-GTNNKTTSVVVHVLPTIQHGQQILSTIEGIPVTLPCKASGNP 1008
Query: 167 APMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVIC 214
P V W I S+ S L++ P + E +C
Sbjct: 1009 KPSVIWSKKGELISTSSAKFS-----AGADGSLYVVSPGGEESGEYVC 1051
Score = 30.0 bits (66), Expect = 2.2
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 114 EDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDH----------LNITCSAT 163
ED G Y C+ + G++S L V P H SE+H L +TC A+
Sbjct: 3499 EDSGKYTCIASNEA-GEVSKHFILKVLEPP----HINGSEEHEEISVIVNNPLELTCIAS 3553
Query: 164 ARPAPMVFW 172
PAP + W
Sbjct: 3554 GIPAPKMTW 3562
Score = 28.5 bits (62), Expect = 6.4
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 110 NITLEDEGCYMCLF-NTFGFGKISGTACLTVYVQPIVSLHYKFS-----EDHLNITCSAT 163
N + D G Y+C+ NT G K L V+V P V + + +++TC +
Sbjct: 2932 NTQITDIGRYVCVAENTAGSAKKYFN--LNVHVPPSVIGPKSENLTVVVNNFISLTCEVS 2989
Query: 164 ARPAPMVFWKVPRSGIENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVIC 214
P P + W I+ +T TL P G T L I K G E C
Sbjct: 2990 GFPPPDLSWLKNEQPIKLNTNTLIVPGGRT-----LQIIRAKVSDGGEYTC 3035
>gi|19743806 roundabout 1 isoform b [Homo sapiens]
Length = 1612
Score = 38.5 bits (88), Expect = 0.006
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 11/123 (8%)
Query: 105 TITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNIT----C 160
T+ +T D G Y C+ GK +A LTV P + + L T C
Sbjct: 275 TLKIRKVTAGDMGSYTCVAENM-VGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQC 333
Query: 161 SATARPAPMVFWKVPRSGIENSTVTLSHPNGTT----SVTSILHIKDPKNQVGKEVICQV 216
AT P P +FW+ R G +N + P ++ S T L I + + ICQ
Sbjct: 334 EATGNPQPAIFWR--REGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQT 391
Query: 217 LHL 219
L++
Sbjct: 392 LNV 394
>gi|67188443 CD276 antigen isoform a [Homo sapiens]
Length = 534
Score = 38.5 bits (88), Expect = 0.006
Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 33/248 (13%)
Query: 31 QVQVVTQDEREQLYTPASLKCSLQN----AQEALIVTWQKKKAVSPENMVTFSENHGVVI 86
+VQV + T A+L+CS + L + WQ + T + G
Sbjct: 248 EVQVPEDPVVALVGTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQG--- 304
Query: 87 QPAYKDKINITQ--LGLQNSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTV---YV 141
AY ++ + L N+++ + + DEG + C + FG S L V Y
Sbjct: 305 -SAYANRTALFPDLLAQGNASLRLQRVRVADEGSFTCFVSIRDFG--SAAVSLQVAAPYS 361
Query: 142 QPIVSLHYKFS---EDHLNITCSA-TARPAPMVFWK----VPRSGIENSTVTLSHPNGTT 193
+P ++L D + ITCS+ P VFW+ VP +G +T +++ G
Sbjct: 362 KPSMTLEPNKDLRPGDTVTITCSSYRGYPEAEVFWQDGQGVPLTG-NVTTSQMANEQGLF 420
Query: 194 SVTSILHIKDPKN-----QVGKEVICQVLHLGTVTDFKQTVN---KGYWFSVPLLLSIVS 245
V S+L + N V V+ Q H G+VT Q + + W +V L + +++
Sbjct: 421 DVHSVLRVVLGANGTYSCLVRNPVLQQDAH-GSVTITGQPMTFPPEALWVTVGLSVCLIA 479
Query: 246 LVILLVLI 253
L++ L +
Sbjct: 480 LLVALAFV 487
Score = 32.0 bits (71), Expect = 0.58
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 103 NSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTV---YVQPIVSLHYKFS---EDHL 156
N+++ + + DEG + C + FG S L V Y +P ++L D +
Sbjct: 104 NASLRLQRVRVADEGSFTCFVSIRDFG--SAAVSLQVAAPYSKPSMTLEPNKDLRPGDTV 161
Query: 157 NITCSA-TARPAPMVFWK----VPRSGIENSTVTLSHPNGTTSVTSILHI 201
ITCS+ P VFW+ VP +G +T +++ G V SIL +
Sbjct: 162 TITCSSYQGYPEAEVFWQDGQGVPLTG-NVTTSQMANEQGLFDVHSILRV 210
>gi|4506569 roundabout 1 isoform a [Homo sapiens]
Length = 1651
Score = 38.5 bits (88), Expect = 0.006
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 11/123 (8%)
Query: 105 TITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFSEDHLNIT----C 160
T+ +T D G Y C+ GK +A LTV P + + L T C
Sbjct: 314 TLKIRKVTAGDMGSYTCVAENM-VGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQC 372
Query: 161 SATARPAPMVFWKVPRSGIENSTVTLSHPNGTT----SVTSILHIKDPKNQVGKEVICQV 216
AT P P +FW+ R G +N + P ++ S T L I + + ICQ
Sbjct: 373 EATGNPQPAIFWR--REGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQT 430
Query: 217 LHL 219
L++
Sbjct: 431 LNV 433
>gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens]
Length = 398
Score = 38.5 bits (88), Expect = 0.006
Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 16/212 (7%)
Query: 13 LSTYSLVWVMAAVVLCTAQVQVVTQDEREQLYTPASLKCSLQNAQEALIVTWQKKKAVSP 72
L ++ W L Q T DE LKC +++ +++ + W
Sbjct: 12 LLLFACCWAPGGANLSQDDSQPWTSDETVVAGGTVVLKCQVKDHEDSSL-QWSNPA---- 66
Query: 73 ENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYMCLFNTFGFGKIS 132
+ + F E + ++I + +I+ N+ L DEG Y C T
Sbjct: 67 QQTLYFGEKRAL-----RDNRIQLVTSTPHELSISISNVALADEGEYTCSIFTMPVRTAK 121
Query: 133 GTACLTVYVQPIVSLHYKFS---EDHLNITC-SATARPAPMVFWKVPRSGIENSTVTLSH 188
+ Q + YK S +D + C S+ ++PA + W+ + +
Sbjct: 122 SLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAARLTWRKGDQELHGEPTRIQE 181
Query: 189 -PNGTT-SVTSILHIKDPKNQVGKEVICQVLH 218
PNG T +V+S + + + G ++C V H
Sbjct: 182 DPNGKTFTVSSSVTFQVTREDDGASIVCSVNH 213
>gi|51317373 netrin-G1 ligand [Homo sapiens]
Length = 640
Score = 38.5 bits (88), Expect = 0.006
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 19/148 (12%)
Query: 55 NAQEALIVTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLE 114
N E + + + + S ++ + N V+ AYK +I + L + T+ F N+T++
Sbjct: 364 NVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAV----LSDGTLNFTNVTVQ 419
Query: 115 DEGCYMCLF-----NTFGFGKISGTACLTV---YVQPIVSLHYKFSEDHLNITCSATARP 166
D G Y C+ NT ++ TA T Y + + S+D T P
Sbjct: 420 DTGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEAR-TTDNNVGP 478
Query: 167 APMVFWKVPRSGIENSTVTLSHPNGTTS 194
P+V W+ N T +L+ P T S
Sbjct: 479 TPVVDWET-----TNVTTSLT-PQSTRS 500
>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
[Homo sapiens]
Length = 527
Score = 38.5 bits (88), Expect = 0.006
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 110 NITLEDEGCYMCLFNTFGFGKISGTACLTVYV-----QPIVSLHYKFSEDHLNITC-SAT 163
NIT ++ G Y C F G+ A L + V +P++S+ + + + C S
Sbjct: 114 NITAQENGTYRCYFQE---GRSYDEAILHLVVAGLGSKPLISMR-GHEDGGIRLECISRG 169
Query: 164 ARPAPMVFWKVPRSGIENSTVTLSHP--NGTTSVTSILHIKDPKNQVGKEVICQVLH--L 219
P P+ W+ P G+ + +S P +G VT+ + I+D + + + C + + L
Sbjct: 170 WYPKPLTVWRDPYGGVAPALKEVSMPDADGLFMVTTAVIIRD---KSVRNMSCSINNTLL 226
Query: 220 GTVTDFKQTVNKGYWFSV-PLLLSI-VSLVILLVLISILLYW 259
G + + + + SV P +++ + +VIL++ I++ +YW
Sbjct: 227 GQKKESVIFIPESFMPSVSPCAVALPIIVVILMIPIAVCIYW 268
>gi|17975772 butyrophilin, subfamily 2, member A1 isoform 2
precursor [Homo sapiens]
Length = 334
Score = 38.5 bits (88), Expect = 0.006
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 19/162 (11%)
Query: 110 NITLEDEGCYMCLFNTFGFGKISGTACLTVYV-----QPIVSLHYKFSEDHLNITC-SAT 163
NIT ++ G Y C F G+ A L + V +P++S+ + + + C S
Sbjct: 114 NITAQENGTYRCYFQE---GRSYDEAILHLVVAGLGSKPLISMR-GHEDGGIRLECISRG 169
Query: 164 ARPAPMVFWKVPRSGIENSTVTLSHP--NGTTSVTSILHIKDPKNQVGKEVICQVLH--L 219
P P+ W+ P G+ + +S P +G VT+ + I+D + + + C + + L
Sbjct: 170 WYPKPLTVWRDPYGGVAPALKEVSMPDADGLFMVTTAVIIRD---KSVRNMSCSINNTLL 226
Query: 220 GTVTDFKQTVNKGYWFSV-PLLLSI-VSLVILLVLISILLYW 259
G + + + + SV P +++ + +VIL++ I++ +YW
Sbjct: 227 GQKKESVIFIPESFMPSVSPCAVALPIIVVILMIPIAVCIYW 268
>gi|33519481 neural cell adhesion molecule 2 precursor [Homo
sapiens]
Length = 837
Score = 38.1 bits (87), Expect = 0.008
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 22/155 (14%)
Query: 62 VTWQKKKAVSPENMVTFSENHGVVIQPAYKDKINITQLGLQNSTITFWNITLEDEGCYMC 121
+T+ + + SPE +++ N G +I+ K + + N+ +T NI D G Y+C
Sbjct: 228 MTFSCRASGSPEPAISWFRN-GKLIEENEKYILKGS-----NTELTVRNIINSDGGPYVC 281
Query: 122 LFNTFGFGKISGTACLTVYVQP-IVSLHYK--FSEDHLNITCSATARPAPMVFWKVPRSG 178
T G+ A L V+VQP I+ L + + + + C A P P + WK G
Sbjct: 282 RA-TNKAGEDEKQAFLQVFVQPHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDG 340
Query: 179 IE--------NSTVTLSHPNGTTSVTSILHIKDPK 205
+ + + +G++S LHIKD K
Sbjct: 341 FTFTEGDKSLDGRIEVKGQHGSSS----LHIKDVK 371
Score = 33.1 bits (74), Expect = 0.26
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 104 STITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVY----VQPIVS-LHYKFSEDHLNI 158
S +T +N +ED G Y C T L +Y + +VS +K ED +
Sbjct: 76 SRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGED-AEV 134
Query: 159 TCSATARPAPMVFW 172
C ++ PAP V W
Sbjct: 135 VCRVSSSPAPAVSW 148
Score = 33.1 bits (74), Expect = 0.26
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 12/110 (10%)
Query: 101 LQNSTITFWNITLEDEGCYMCLFNTFGFGKIS-GTACLTVYVQPIVSLHYKFSE------ 153
L N+ + NI DEG Y C G+I + V V P +S+ K
Sbjct: 166 LANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERG 225
Query: 154 DHLNITCSATARPAPMVFWKVPRSG---IENSTVTLSHPNGTTSVTSILH 200
+ + +C A+ P P + W R+G EN L N +V +I++
Sbjct: 226 EEMTFSCRASGSPEPAISWF--RNGKLIEENEKYILKGSNTELTVRNIIN 273
Score = 30.4 bits (67), Expect = 1.7
Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 7/124 (5%)
Query: 103 NSTITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVS---LHYKFSEDHLNIT 159
+S++ ++ L D G Y C + G Y +S ++Y + + +NI+
Sbjct: 362 SSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINIS 421
Query: 160 CSATARPAPMVFWKVPRSGI--ENSTVTLSHPNGTTSVTSILHIKDPKNQVGKEVICQVL 217
C + P + W+ + + +N+T ++ G + I D N G+
Sbjct: 422 CDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSD--NDFGRYNCTATN 479
Query: 218 HLGT 221
H+GT
Sbjct: 480 HIGT 483
>gi|221316762 neurotrimin isoform 4 [Homo sapiens]
Length = 316
Score = 37.7 bits (86), Expect = 0.011
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 105 TITFWNITLEDEGCYMCLFNTFGFGKISGTACLTVYVQPIVSLHYKFS---EDHLNITCS 161
+I N+ + DEG Y C T K S + IV + S +++++TC
Sbjct: 99 SIEIQNVDVYDEGPYTCSVQTDNHPKTSRVHLIVQVSPKIVEISSDISINEGNNISLTCI 158
Query: 162 ATARPAPMVFWK 173
AT RP P V W+
Sbjct: 159 ATGRPEPTVTWR 170
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,981,139
Number of Sequences: 37866
Number of extensions: 415438
Number of successful extensions: 1731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 1418
Number of HSP's gapped (non-prelim): 435
length of query: 269
length of database: 18,247,518
effective HSP length: 101
effective length of query: 168
effective length of database: 14,423,052
effective search space: 2423072736
effective search space used: 2423072736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.