Search of human proteins with 8923708

Search of human proteins with 8923708

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|8923708 FAD-dependent oxidoreductase domain containing 1
[Homo sapiens]
         (486 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|8923708 FAD-dependent oxidoreductase domain containing 1 [Hom...   988   0.0  
gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens]     64   4e-10
gi|197927446 sarcosine dehydrogenase precursor [Homo sapiens]          60   3e-09
gi|21361378 sarcosine dehydrogenase precursor [Homo sapiens]           60   3e-09
gi|194306651 pyruvate dehydrogenase phosphatase regulatory subun...    57   4e-08
gi|60499001 pipecolic acid oxidase [Homo sapiens]                      54   3e-07
gi|13376331 L-2-hydroxyglutarate dehydrogenase precursor [Homo s...    36   0.069
gi|119703746 electron-transferring-flavoprotein dehydrogenase pr...    33   0.76 
gi|183227703 mitochondrial translation optimization 1 homolog is...    32   1.3  
gi|19882217 mitochondrial translation optimization 1 homolog iso...    32   1.3  
gi|74024895 mitochondrial translation optimization 1 homolog iso...    32   1.3  
gi|105990535 coagulation factor V precursor [Homo sapiens]             32   1.7  
gi|50845384 ADAM metallopeptidase with thrombospondin type 1 mot...    30   3.8  
gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens]    30   4.9  
gi|10864011 sulfide dehydrogenase like [Homo sapiens]                  30   4.9  
gi|224586882 cold shock domain protein A isoform a [Homo sapiens]      29   8.4  

>gi|8923708 FAD-dependent oxidoreductase domain containing 1 [Homo
           sapiens]
          Length = 486

 Score =  988 bits (2555), Expect = 0.0
 Identities = 486/486 (100%), Positives = 486/486 (100%)

Query: 1   MIRRVLPHGMGRGLLTRRPGTRRGGFSLDWDGKVSEIKKKIKSILPGRSCDLLQDTSHLP 60
           MIRRVLPHGMGRGLLTRRPGTRRGGFSLDWDGKVSEIKKKIKSILPGRSCDLLQDTSHLP
Sbjct: 1   MIRRVLPHGMGRGLLTRRPGTRRGGFSLDWDGKVSEIKKKIKSILPGRSCDLLQDTSHLP 60

Query: 61  PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFS 120
           PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFS
Sbjct: 61  PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFS 120

Query: 121 LPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ 180
           LPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ
Sbjct: 121 LPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ 180

Query: 181 EGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQ 240
           EGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQ
Sbjct: 181 EGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQ 240

Query: 241 GEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAA 300
           GEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAA
Sbjct: 241 GEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAA 300

Query: 301 LAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYL 360
           LAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYL
Sbjct: 301 LAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYL 360

Query: 361 GGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNG 420
           GGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNG
Sbjct: 361 GGRSPTEQEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAWAGYYDYNTFDQNG 420

Query: 421 VVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKI 480
           VVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKI
Sbjct: 421 VVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDLSPFLFTRFYLGEKI 480

Query: 481 QENNII 486
           QENNII
Sbjct: 481 QENNII 486


>gi|24797151 dimethylglycine dehydrogenase precursor [Homo sapiens]
          Length = 866

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 98/451 (21%), Positives = 180/451 (39%), Gaps = 69/451 (15%)

Query: 62  EHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFSL 121
           + ++ VI+GGG +G+S+AY L K     G   V+++E+      A +     G+   F  
Sbjct: 48  DRAETVIIGGGCVGVSLAYHLAKA----GMKDVVLLEKSEL--TAGSTWHAAGLTTYFHP 101

Query: 122 PENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ- 180
             N++   + +     I  Y  + +     + F+  G + LA+       E   ++ R  
Sbjct: 102 GINLKKIHYDS-----IKLYEKLEEETGQVVGFHQPGSIRLATTP-VRVDEFKYQMTRTG 155

Query: 181 -EGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFC 239
               +  L+ P++++  FP +N   V    Y   D G  DP+ L   L    +  G L  
Sbjct: 156 WHATEQYLIEPEKIQEMFPLLNMNKVLAGLYNPGD-GHIDPYSLTMALAAGARKCGALL- 213

Query: 240 QGEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIA 299
                ++ +    +    D               D       +    ++NAAG W+ ++ 
Sbjct: 214 -----KYPAPVTSLKARSDGT------------WDVETPQGSMRANRIVNAAGFWAREVG 256

Query: 300 ALAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGL--ETPLVADTSGAYFRREGLGS 357
            + G        L+   +PV+   +YV      +   L  E P++ D  G+Y+ R+    
Sbjct: 257 KMIG--------LEHPLIPVQ--HQYVVTSTISEVKALKRELPVLRDLEGSYYLRQERDG 306

Query: 358 NYLGGRSPTEQEEPDPANLE------VDHDFFQ---DKVWPHLAL---RVPAFETLKVQS 405
              G     E+ +   + +          + F+   D++  H+      VP  +   + +
Sbjct: 307 LLFGPYESQEKMKVQDSWVTNGVPPGFGKELFESDLDRIMEHIKAAMEMVPVLKKADIIN 366

Query: 406 AWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGR--FQT 463
              G   Y+  D   +VGPH  V N + A GF G+G+  A G+G+ +++ +L G   F  
Sbjct: 367 VVNGPITYSP-DILPMVGPHQGVRNYWVAIGF-GYGIIHAGGVGKYLSDWILHGEPPFDL 424

Query: 464 IDLSPFLF----TRFYLGEKIQE----NNII 486
           I+L P  +    T  Y   K +E    NNI+
Sbjct: 425 IELDPNRYGKWTTTQYTEAKARESYGFNNIV 455


>gi|197927446 sarcosine dehydrogenase precursor [Homo sapiens]
          Length = 918

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 95/429 (22%), Positives = 173/429 (40%), Gaps = 46/429 (10%)

Query: 54  QDTSHLPPEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVG 113
           Q  S   P  ++VV++GGG LG    Y L KL    G    +++ER+   S   T     
Sbjct: 57  QGPSRPLPSTANVVVIGGGSLGCQTLYHLAKL----GMSGAVLLERERLTS--GTTWHTA 110

Query: 114 GICQQFSLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAA-AME 172
           G+  Q   P ++++ L  A   R ++  L   +   L   +  +G L +AS +      +
Sbjct: 111 GLLWQLR-PSDVEVELL-AHTRRVVSRELE--EETGLHTGWIQNGGLFIASNRQRLDEYK 166

Query: 173 SNVKVQRQEGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQ 232
             + + +  G +  ++SP + +  +P +N + +    Y   D G  DP      L R   
Sbjct: 167 RLMSLGKAYGVESHVLSPAETKTLYPLMNVDDLYGTLYVPHD-GTMDPAGTCTTLARAAS 225

Query: 233 SLGVLFCQGEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAG 292
           + G      +V      +   + TDD  V  +R+  V        ++  ++   V+N AG
Sbjct: 226 ARGA-----QVIENCPVTGIRVWTDDFGV--RRVAGVET------QHGSIQTPCVVNCAG 272

Query: 293 AWSAQIAALAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRR 352
            W++ +  +AGV           K+P+        V    +G     P V D   + + R
Sbjct: 273 VWASAVGRMAGV-----------KVPLVAMHHAYVVTERIEGIQ-NMPNVRDHDASVYLR 320

Query: 353 EGLGSNYLGG--RSPTEQEEPDP----ANLEVDHDFFQDKVWPHLALRVPAFETLKVQSA 406
               +  +GG   +P   EE          ++D + F   +   +  RVP  E   ++S 
Sbjct: 321 LQGDALSVGGYEANPIFWEEVSDKFAFGLFDLDWEVFTQHIEGAIN-RVPVLEKTGIKST 379

Query: 407 WAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDL 466
             G   + T D   ++G  P +   +   GF+  G+    G G+ +A  ++ GR +  D+
Sbjct: 380 VCGPESF-TPDHKPLMGEAPELRGFFLGCGFNSAGMMLGGGCGQELAHWIIHGRPEK-DM 437

Query: 467 SPFLFTRFY 475
             +   RF+
Sbjct: 438 HGYDIRRFH 446


>gi|21361378 sarcosine dehydrogenase precursor [Homo sapiens]
          Length = 918

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 95/429 (22%), Positives = 173/429 (40%), Gaps = 46/429 (10%)

Query: 54  QDTSHLPPEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVG 113
           Q  S   P  ++VV++GGG LG    Y L KL    G    +++ER+   S   T     
Sbjct: 57  QGPSRPLPSTANVVVIGGGSLGCQTLYHLAKL----GMSGAVLLERERLTS--GTTWHTA 110

Query: 114 GICQQFSLPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAA-AME 172
           G+  Q   P ++++ L  A   R ++  L   +   L   +  +G L +AS +      +
Sbjct: 111 GLLWQLR-PSDVEVELL-AHTRRVVSRELE--EETGLHTGWIQNGGLFIASNRQRLDEYK 166

Query: 173 SNVKVQRQEGAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQ 232
             + + +  G +  ++SP + +  +P +N + +    Y   D G  DP      L R   
Sbjct: 167 RLMSLGKAYGVESHVLSPAETKTLYPLMNVDDLYGTLYVPHD-GTMDPAGTCTTLARAAS 225

Query: 233 SLGVLFCQGEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAG 292
           + G      +V      +   + TDD  V  +R+  V        ++  ++   V+N AG
Sbjct: 226 ARGA-----QVIENCPVTGIRVWTDDFGV--RRVAGVET------QHGSIQTPCVVNCAG 272

Query: 293 AWSAQIAALAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRR 352
            W++ +  +AGV           K+P+        V    +G     P V D   + + R
Sbjct: 273 VWASAVGRMAGV-----------KVPLVAMHHAYVVTERIEGIQ-NMPNVRDHDASVYLR 320

Query: 353 EGLGSNYLGG--RSPTEQEEPDP----ANLEVDHDFFQDKVWPHLALRVPAFETLKVQSA 406
               +  +GG   +P   EE          ++D + F   +   +  RVP  E   ++S 
Sbjct: 321 LQGDALSVGGYEANPIFWEEVSDKFAFGLFDLDWEVFTQHIEGAIN-RVPVLEKTGIKST 379

Query: 407 WAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTIDL 466
             G   + T D   ++G  P +   +   GF+  G+    G G+ +A  ++ GR +  D+
Sbjct: 380 VCGPESF-TPDHKPLMGEAPELRGFFLGCGFNSAGMMLGGGCGQELAHWIIHGRPEK-DM 437

Query: 467 SPFLFTRFY 475
             +   RF+
Sbjct: 438 HGYDIRRFH 446


>gi|194306651 pyruvate dehydrogenase phosphatase regulatory subunit
           [Homo sapiens]
          Length = 879

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 89/412 (21%), Positives = 159/412 (38%), Gaps = 58/412 (14%)

Query: 61  PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFS 120
           P  + VVI GGG+ G SVAY L K+    G   ++++E+    +  ST    G +    S
Sbjct: 40  PTQAQVVICGGGITGTSVAYHLSKM----GWKDIVLLEQGRL-AAGSTRFCAGIL----S 90

Query: 121 LPENIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEKDAAAMESNVKVQRQ 180
              ++ +    A +   +  Y  +     +   +  +G + LA  +D       +     
Sbjct: 91  TARHLTIEQKMADYSNKL--YYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLN 148

Query: 181 E-GAKVSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFC 239
             G    ++SP ++      +N   +  A +  ED                V S  V   
Sbjct: 149 VIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDA--------------VVSSADVALA 194

Query: 240 QGEVTRFVSSSQRMLTTDDKAVVL----KRIHEVHVKMDRSLEYQPVECAIVINAAGAWS 295
                   ++SQ  +   D+  VL    K+     V+ D+      +EC   +N AG W+
Sbjct: 195 LAS-----AASQNGVQIYDRTSVLHVMVKKGQVTGVETDKG----QIECQYFVNCAGQWA 245

Query: 296 AQIAALAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGP-GLETPLVADTSGAYFRREG 354
            ++    G+    P       +P+   + +  +    + P    TP + D  G  + R  
Sbjct: 246 YEL----GLSNEEP-----VSIPLHACEHFYLLTRPLETPLQSSTPTIVDADGRIYIRNW 296

Query: 355 LGSNYLGG--RSP----TE-QEEPDPANLEVDHDFFQDKVWPHLALRVPAFETLKVQSAW 407
            G    GG  ++P    TE + + +  NL+ D D F + +   L  R+P  ETL++    
Sbjct: 297 QGGILSGGFEKNPKPIFTEGKNQLEIQNLQEDWDHF-EPLLSSLLRRMPELETLEIMKL- 354

Query: 408 AGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKG 459
               +  T D   ++G  P V   +   G +  GL    G G+ +AE ++ G
Sbjct: 355 VNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHG 406


>gi|60499001 pipecolic acid oxidase [Homo sapiens]
          Length = 390

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 99/430 (23%), Positives = 172/430 (40%), Gaps = 76/430 (17%)

Query: 65  DVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQFSLPEN 124
           D +++G G+ G   AY L K   R     +L++E+   +   S G S G    Q  +   
Sbjct: 9   DAIVIGAGIQGCFTAYHLAKHRKR-----ILLLEQ--FFLPHSRGSSHG----QSRIIRK 57

Query: 125 IQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASEK--DAAAMESNVKVQRQEG 182
             L  F    +    +  A ++          +G LLL  ++  +   +++N+  QR E 
Sbjct: 58  AYLEDFYTRMMHECYQIWAQLEHEAGTQLHRQTGLLLLGMKENQELKTIQANLSRQRVEH 117

Query: 183 AKVSLMSPDQLRNKFPWINTEGVALASYGMEDE--GWFDPWCLLQGLRRKVQSLGVLFCQ 240
                +S ++L+ +FP I    +     G+ D   G    +  L+ L+  ++ LG +   
Sbjct: 118 ---QCLSSEELKQRFPNIR---LPRGEVGLLDNSGGVIYAYKALRALQDAIRQLGGIVRD 171

Query: 241 GEVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAA 300
           GE  + V  +  +L T              VK   S  YQ     I    AG W+ Q+  
Sbjct: 172 GE--KVVEINPGLLVT--------------VKTT-SRSYQAKSLVIT---AGPWTNQLLR 211

Query: 301 LAGVGEGPPGTLQ-----------GTKLPVEPRKRYVYVWHCPQGP-GLETPLVADTSGA 348
             G+ E P  TL+           G+    +    ++++  CP    GL T       G 
Sbjct: 212 PLGI-EMPLQTLRINVCYWREMVPGSYGVSQAFPCFLWLGLCPHHIYGLPT-------GE 263

Query: 349 YFRREGLGSNYLGGRSPTEQEEP----DPANLEVDHDFFQDKVWPHLALRVPAFETLKVQ 404
           Y     +  ++     P E++ P    D  ++++   F +D + P L       E+    
Sbjct: 264 YPGLMKVSYHHGNHADPEERDCPTARTDIGDVQILSSFVRDHL-PDLKPEPAVIESCMYT 322

Query: 405 SAWAGYYDYNTFDQNGVVGPHPLVVNMYFATGFSGHGLQQAPGIGRAVAEMVLKGRFQTI 464
                    NT D+  ++  HP   N+    GFSGHG + AP +G+ + E+ +K    + 
Sbjct: 323 ---------NTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMK-LTPSY 372

Query: 465 DLSPFLFTRF 474
           DL+PF  +RF
Sbjct: 373 DLAPFRISRF 382


>gi|13376331 L-2-hydroxyglutarate dehydrogenase precursor [Homo
           sapiens]
          Length = 463

 Score = 36.2 bits (82), Expect = 0.069
 Identities = 64/301 (21%), Positives = 121/301 (40%), Gaps = 28/301 (9%)

Query: 65  DVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQ-FSLPE 123
           D+VIVGGG++GL+ A   + L  R  ++ + V+E++   +   TG + G I    +  PE
Sbjct: 50  DIVIVGGGIVGLASA---RALILRHPSLSIGVLEKEKDLAVHQTGHNSGVIHSGIYYKPE 106

Query: 124 NIQLSLFSASFLRNINEYLAVVDAPPLDLRFNPSGYLLLASE-KDAAAMESNVKVQRQEG 182
           +++  L        + EY          + +   G L++A E ++   +++  +   Q G
Sbjct: 107 SLKAKL-CVQGAALLYEY-----CQQKGISYKQCGKLIVAVEQEEIPRLQALYEKGLQNG 160

Query: 183 AK-VSLMSPDQLRNKFPWINTEGVALASYGMEDEGWFDPWCLLQGLRRKVQSLGVLFCQG 241
              + L+  + ++ K P+       L +      G  D   +     +  Q  G      
Sbjct: 161 VPGLRLIQQEDIKKKEPYCR----GLMAIDCPHTGIVDYRQVALSFAQDFQEAG----GS 212

Query: 242 EVTRFVSSSQRMLTTDDKAVVLKRIHEVHVKMDRSLEYQPVECAIVINAAGAWSAQIAAL 301
            +T F      M        +    + + +K  +  E   + C  V+  AG +S +I+ L
Sbjct: 213 VLTNFEVKGIEMAKESPSRSIDGMQYPIVIKNTKGEE---IRCQYVVTCAGLYSDRISEL 269

Query: 302 AGVGEGPP-GTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYL 360
           +G    P     +G  L ++P K Y+   +    P    P +    G +F     GS +L
Sbjct: 270 SGCTPDPRIVPFRGDYLLLKPEKCYLVKGNIYPVPDSRFPFL----GVHFTPRMDGSIWL 325

Query: 361 G 361
           G
Sbjct: 326 G 326


>gi|119703746 electron-transferring-flavoprotein dehydrogenase
           precursor [Homo sapiens]
          Length = 617

 Score = 32.7 bits (73), Expect = 0.76
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 62  EHSDVVIVGGGVLGLSVAYWLKKLE-SRRGAIRVLVVER 99
           E +DVVIVG G  GLS A  LK+L  +    IRV +VE+
Sbjct: 67  EEADVVIVGAGPAGLSAAVRLKQLAVAHEKDIRVCLVEK 105


>gi|183227703 mitochondrial translation optimization 1 homolog
           isoform c [Homo sapiens]
          Length = 732

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 52  LLQDTSHLPPEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLS 111
           L  D++     H DV+++GGG  G   A       +R G+  +L+  R  T  Q S   S
Sbjct: 25  LSSDSAAPRTPHFDVIVIGGGHAGTEAA----TAAARCGSRTLLLTHRVDTIGQMSCNPS 80

Query: 112 VGGI 115
            GGI
Sbjct: 81  FGGI 84


>gi|19882217 mitochondrial translation optimization 1 homolog
           isoform b [Homo sapiens]
          Length = 717

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 52  LLQDTSHLPPEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLS 111
           L  D++     H DV+++GGG  G   A       +R G+  +L+  R  T  Q S   S
Sbjct: 25  LSSDSAAPRTPHFDVIVIGGGHAGTEAA----TAAARCGSRTLLLTHRVDTIGQMSCNPS 80

Query: 112 VGGI 115
            GGI
Sbjct: 81  FGGI 84


>gi|74024895 mitochondrial translation optimization 1 homolog
           isoform a [Homo sapiens]
          Length = 692

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 52  LLQDTSHLPPEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLS 111
           L  D++     H DV+++GGG  G   A       +R G+  +L+  R  T  Q S   S
Sbjct: 25  LSSDSAAPRTPHFDVIVIGGGHAGTEAA----TAAARCGSRTLLLTHRVDTIGQMSCNPS 80

Query: 112 VGGI 115
            GGI
Sbjct: 81  FGGI 84


>gi|105990535 coagulation factor V precursor [Homo sapiens]
          Length = 2224

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 319  VEPRKRYVYVWHCPQGPGLETPLVADTSGAYF 350
            V+P   Y YVWH  +  G E+P  A  + AY+
Sbjct: 1700 VQPNSSYTYVWHATERSGPESPGSACRAWAYY 1731


>gi|50845384 ADAM metallopeptidase with thrombospondin type 1 motif,
           1 preproprotein [Homo sapiens]
          Length = 967

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 26/62 (41%), Positives = 27/62 (43%), Gaps = 12/62 (19%)

Query: 294 WSAQIAALAGVGEGPPGTLQGTKLPVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRRE 353
           WS Q  AL GVG+ P GT    K       RYV           ET LVAD S A F   
Sbjct: 229 WSPQDPALQGVGQ-PTGTGSIRKKRFVSSHRYV-----------ETMLVADQSMAEFHGS 276

Query: 354 GL 355
           GL
Sbjct: 277 GL 278


>gi|203098013 all-trans-13,14-dihydroretinol saturase [Homo sapiens]
          Length = 610

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 14/59 (23%)

Query: 61  PEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGICQQF 119
           PE  DVV++G G  GL+ A  L K        RVLV+E+ HT          GG C  F
Sbjct: 65  PEKLDVVVIGSGFGGLAAAAILAK-----AGKRVLVLEQ-HT--------KAGGCCHTF 109


>gi|10864011 sulfide dehydrogenase like [Homo sapiens]
          Length = 450

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 57  SHLPPEHSDVVIVGGGVLGLSVAYWLKKLESRRGAIRVLVVERDHTYSQASTGLSVGGIC 116
           SH    H +V+++GGG  G+++A  +K+   + GA  V +VE    +        VG   
Sbjct: 37  SHAARNHYEVLVLGGGSGGITMAARMKR---KVGAENVAIVEPSERHFYQPIWTLVGAGA 93

Query: 117 QQFS 120
           +Q S
Sbjct: 94  KQLS 97


>gi|224586882 cold shock domain protein A isoform a [Homo sapiens]
          Length = 372

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 42/171 (24%)

Query: 266 IHEVHVKMDRSLEY-------QPVECAIVINAAGAWSAQIAALAGVGEGPPGT-LQGTKL 317
           +H+  +K +   +Y       + VE  +V    GA +A +        GP G  ++G++ 
Sbjct: 118 VHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVT-------GPDGVPVEGSRY 170

Query: 318 PVEPRKRYVYVWHCPQGPGLETPLVADTSGAYFRREGLGSNYLGGRSPTEQEEPDPANLE 377
             + R+RY                     G Y RR G   NY G     E+EE    + E
Sbjct: 171 AAD-RRRY-------------------RRGYYGRRRGPPRNYAG-----EEEEEGSGSSE 205

Query: 378 VDHDFFQDKVWPHLA--LRVPAFETLKVQSAWAGYYDYNTFDQNGVVGPHP 426
                  D+ +      LR P +     Q  +  Y+   TFD+   V PHP
Sbjct: 206 GFDPPATDRQFSGARNQLRRPQYRPQYRQRRFPPYHVGQTFDRRSRVLPHP 256


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,667,593
Number of Sequences: 37866
Number of extensions: 925647
Number of successful extensions: 1983
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1967
Number of HSP's gapped (non-prelim): 24
length of query: 486
length of database: 18,247,518
effective HSP length: 106
effective length of query: 380
effective length of database: 14,233,722
effective search space: 5408814360
effective search space used: 5408814360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.