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Search of human proteins with 77681565
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|77681565 NG5 protein [Homo sapiens]
(306 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|77681565 NG5 protein [Homo sapiens] 651 0.0
gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens] 89 5e-18
gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens] 89 5e-18
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 74 2e-13
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 71 1e-12
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 70 2e-12
gi|42544130 splicing factor 1 isoform 1 [Homo sapiens] 70 3e-12
gi|42544125 splicing factor 1 isoform 2 [Homo sapiens] 68 9e-12
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 67 2e-11
gi|47132519 Ras association and pleckstrin homology domains 1 is... 67 2e-11
gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens] 66 4e-11
gi|160707881 formin 2 [Homo sapiens] 65 6e-11
gi|116284392 mucin 2 precursor [Homo sapiens] 65 8e-11
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 65 8e-11
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 65 8e-11
gi|11386183 WAS protein family, member 2 [Homo sapiens] 65 1e-10
gi|7706501 WW domain binding protein 11 [Homo sapiens] 65 1e-10
gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens] 64 2e-10
gi|163965366 nascent polypeptide-associated complex alpha subuni... 64 2e-10
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 64 2e-10
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 64 2e-10
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 63 4e-10
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 63 4e-10
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 63 4e-10
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 62 6e-10
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 62 8e-10
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 62 8e-10
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 62 8e-10
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 62 8e-10
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 61 1e-09
>gi|77681565 NG5 protein [Homo sapiens]
Length = 306
Score = 651 bits (1679), Expect = 0.0
Identities = 306/306 (100%), Positives = 306/306 (100%)
Query: 1 MSSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
MSSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG
Sbjct: 1 MSSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
Query: 61 AGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEG 120
AGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEG
Sbjct: 61 AGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEG 120
Query: 121 PLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVP 180
PLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVP
Sbjct: 121 PLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVP 180
Query: 181 VYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMPIAVLTTICCFWPTGI 240
VYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMPIAVLTTICCFWPTGI
Sbjct: 181 VYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMPIAVLTTICCFWPTGI 240
Query: 241 IAIFKAVQVRTALARGDMVSAEIASREARNFSFISLAVGIAAMVLCTILTVVIIIAAQHH 300
IAIFKAVQVRTALARGDMVSAEIASREARNFSFISLAVGIAAMVLCTILTVVIIIAAQHH
Sbjct: 241 IAIFKAVQVRTALARGDMVSAEIASREARNFSFISLAVGIAAMVLCTILTVVIIIAAQHH 300
Query: 301 ENYWDP 306
ENYWDP
Sbjct: 301 ENYWDP 306
>gi|113421234 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 89.0 bits (219), Expect = 5e-18
Identities = 91/288 (31%), Positives = 110/288 (38%), Gaps = 37/288 (12%)
Query: 23 PQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLP 82
P P A P PPQ H P AG + + +G S AT P
Sbjct: 19 PLPAAPPSRTPPQTLK----------HLPSGEPGPPFPAGMPGGGSGSDTKGGGSPAT-P 67
Query: 83 RPPHHAPPGPAAGAPP--PGCATLPRMPPDPY-LQETRFEGPLPPPPPAAAA-------- 131
P +P PAA P P LP++P P L E G P AAA
Sbjct: 68 EDPR-SPAKPAAPEDPQMPAQPALPQLPRRPRTLDEDGAAGEAGPVSKAAAGGAPHIGFV 126
Query: 132 --PPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVY---PVGT 186
PPP AP AP P V P + P P QL P P P G
Sbjct: 127 GEPPPYAPPDPKAAPLLYPPFPQVPVVLQPAPSALFPP-PAQLYPAAPTPPALFSPPAGA 185
Query: 187 PYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMPIAVLTTICCFWPTGIIAIFKA 246
+ G P PG A +E R P DYM +VL T+ C TG+IAI +
Sbjct: 186 AFPFPVYNG--------PMAGVPGPATVEHRPLPKDYMMESVLVTLFCCLLTGLIAIVYS 237
Query: 247 VQVRTALARGDMVSAEIASREARNFSFISLAVGIAAMVLCTILTVVII 294
+ R AL RGD+ AE ASR+AR+ SL G+ I VV +
Sbjct: 238 HEARAALGRGDLAQAEEASRKARSLVLFSLLFGVFVSTSWVIYVVVAL 285
Score = 34.7 bits (78), Expect = 0.11
Identities = 34/109 (31%), Positives = 41/109 (37%), Gaps = 28/109 (25%)
Query: 17 PPPYNAPQPPAEPPAPPP--------QAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSA 68
PPPY P P A P PP Q APS A P A+
Sbjct: 129 PPPYAPPDPKAAPLLYPPFPQVPVVLQPAPS--------------ALFPPPAQLYPAAPT 174
Query: 69 ATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMP-PDPYLQET 116
A P + A P P ++ GP AG P P AT+ P P Y+ E+
Sbjct: 175 PPALFSPPAGAAFPFPVYN---GPMAGVPGP--ATVEHRPLPKDYMMES 218
>gi|113420954 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 288
Score = 89.0 bits (219), Expect = 5e-18
Identities = 91/288 (31%), Positives = 110/288 (38%), Gaps = 37/288 (12%)
Query: 23 PQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLP 82
P P A P PPQ H P AG + + +G S AT P
Sbjct: 19 PLPAAPPSRTPPQTLK----------HLPSGEPGPPFPAGMPGGGSGSDTKGGGSPAT-P 67
Query: 83 RPPHHAPPGPAAGAPP--PGCATLPRMPPDPY-LQETRFEGPLPPPPPAAAA-------- 131
P +P PAA P P LP++P P L E G P AAA
Sbjct: 68 EDPR-SPAKPAAPEDPQMPAQPALPQLPRRPRTLDEDGAAGEAGPVSKAAAGGAPHIGFV 126
Query: 132 --PPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVY---PVGT 186
PPP AP AP P V P + P P QL P P P G
Sbjct: 127 GEPPPYAPPDPKAAPLLYPPFPQVPVVLQPAPSALFPP-PAQLYPAAPTPPALFSPPAGA 185
Query: 187 PYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMPIAVLTTICCFWPTGIIAIFKA 246
+ G P PG A +E R P DYM +VL T+ C TG+IAI +
Sbjct: 186 AFPFPVYNG--------PMAGVPGPATVEHRPLPKDYMMESVLVTLFCCLLTGLIAIVYS 237
Query: 247 VQVRTALARGDMVSAEIASREARNFSFISLAVGIAAMVLCTILTVVII 294
+ R AL RGD+ AE ASR+AR+ SL G+ I VV +
Sbjct: 238 HEARAALGRGDLAQAEEASRKARSLVLFSLLFGVFVSTSWVIYVVVAL 285
Score = 34.7 bits (78), Expect = 0.11
Identities = 34/109 (31%), Positives = 41/109 (37%), Gaps = 28/109 (25%)
Query: 17 PPPYNAPQPPAEPPAPPP--------QAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSA 68
PPPY P P A P PP Q APS A P A+
Sbjct: 129 PPPYAPPDPKAAPLLYPPFPQVPVVLQPAPS--------------ALFPPPAQLYPAAPT 174
Query: 69 ATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMP-PDPYLQET 116
A P + A P P ++ GP AG P P AT+ P P Y+ E+
Sbjct: 175 PPALFSPPAGAAFPFPVYN---GPMAGVPGP--ATVEHRPLPKDYMMES 218
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 73.6 bits (179), Expect = 2e-13
Identities = 72/231 (31%), Positives = 89/231 (38%), Gaps = 33/231 (14%)
Query: 19 PYNAPQPPAEPPAPPPQAAPSSHHHHHHHYH---QSGTATLPRLGAGGLASSAATAQRGP 75
P+ P PP + +A S+HHHHHHH+H G LP G L + A +GP
Sbjct: 1217 PFQMPPPPTGQASASSSSASSTHHHHHHHHHGHSHGGLGVLPD-GQSKLQALHAQYCQGP 1275
Query: 76 S---------SSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPP 126
+LP PP PP P G+ PP A+ P + P + GP+P P
Sbjct: 1276 GPAPPPYLPPQQPSLPPPPQQPPPLPQLGSIPPPPASAPPVGPHRHFHA---HGPVPGPQ 1332
Query: 127 PAAAAPPPPAPAQTAQ-----APGFVVPTHAGTVGTLPLGGYVAPGYPLQLQ-PCTAYVP 180
P AP + A AP P H T LPL P Q P
Sbjct: 1333 HYTLGRPGRAPRRGAGGHPQFAPHGRHPLHQPT-SPLPLYSPAPQHPPAHKQGPKHFIFS 1391
Query: 181 VYPVGTPYAG--GTPGG--TGVTSTLPPPPQGPGLALLEPRR--PPHDYMP 225
+P P AG G PG G + + P PQ P L P PPH P
Sbjct: 1392 HHPQMMPAAGAAGGPGSRPPGGSYSHPHHPQSP----LSPHSPIPPHPSYP 1438
Score = 57.8 bits (138), Expect = 1e-08
Identities = 53/183 (28%), Positives = 58/183 (31%), Gaps = 51/183 (27%)
Query: 8 LPDSVPHTSPPPYNAPQPP-----AEPPAPPPQAAPSSHHHHH------HHYHQSGTATL 56
LP P PPP P P PPA P P H H H HY
Sbjct: 1283 LPPQQPSLPPPPQQPPPLPQLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHYTLGRPGRA 1342
Query: 57 PRLGAGGLASSAATAQRGPSSSATLPRP---------------------PHHAPPGPAAG 95
PR GAGG A R P T P P HH PAAG
Sbjct: 1343 PRRGAGGHPQFAPHG-RHPLHQPTSPLPLYSPAPQHPPAHKQGPKHFIFSHHPQMMPAAG 1401
Query: 96 A-------PPPGCATLPRMPPDPYLQETRFEGPLPP-------PPPAAAAPPPPAPAQTA 141
A PP G + P P P + P+PP PPP+ P P P +
Sbjct: 1402 AAGGPGSRPPGGSYSHPHHPQSPLSPHS----PIPPHPSYPPLPPPSPHTPHSPLPPTSP 1457
Query: 142 QAP 144
P
Sbjct: 1458 HGP 1460
Score = 48.5 bits (114), Expect = 7e-06
Identities = 58/218 (26%), Positives = 65/218 (29%), Gaps = 80/218 (36%)
Query: 13 PHTSPPPYNAPQPPAEPPAP--------------PPQAAP--SSHHHHH--------HHY 48
P +PPPY PQ P+ PP P PP +AP H H H HY
Sbjct: 1275 PGPAPPPYLPPQQPSLPPPPQQPPPLPQLGSIPPPPASAPPVGPHRHFHAHGPVPGPQHY 1334
Query: 49 HQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRP---------------------PHH 87
PR GAGG A R P T P P HH
Sbjct: 1335 TLGRPGRAPRRGAGGHPQFAPHG-RHPLHQPTSPLPLYSPAPQHPPAHKQGPKHFIFSHH 1393
Query: 88 APPGPAAGAP----------------------------PPGCATLPRMPPDPYLQETRFE 119
PAAGA PP + P PP P+ +
Sbjct: 1394 PQMMPAAGAAGGPGSRPPGGSYSHPHHPQSPLSPHSPIPPHPSYPPLPPPSPHTPHS--- 1450
Query: 120 GPLPPPPPAAA--APPPPAPAQTAQAPGFVVPTHAGTV 155
PLPP P A PP A A P+ TV
Sbjct: 1451 -PLPPTSPHGPLHASGPPGTANPPSANPKAKPSRISTV 1487
Score = 42.4 bits (98), Expect = 5e-04
Identities = 42/149 (28%), Positives = 53/149 (35%), Gaps = 31/149 (20%)
Query: 9 PDSVPHTSPPPYNAPQ---PPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLP----RLGA 61
P+ +P T PPP P+ P PP PPP + + + G L RL A
Sbjct: 529 PERLPSTEPPPQGRPEFWAPAPLPPVPPPVPSGTREDGSREEGTRRGPGCLECRDFRLRA 588
Query: 62 GGL------------ASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLP-RMP 108
L + + RG + +P G PPG A +P R
Sbjct: 589 AHLPLLTIEPPSDSSVDLSDRSDRGSVHRQLVYEADGCSPHGTLKHKGPPGRAPIPHRHY 648
Query: 109 PDPYLQETRFEGPLPPPPPAAAAPPPPAP 137
P P EGP P PP P PPAP
Sbjct: 649 PAP-------EGPAPAPP----GPLPPAP 666
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 71.2 bits (173), Expect = 1e-12
Identities = 64/252 (25%), Positives = 86/252 (34%), Gaps = 59/252 (23%)
Query: 12 VPHTSPPPYNAPQPPA------------EPPAPPPQAAPSSHHHHH------HHYHQ--- 50
+P +SP ++ P PP P PP P HHHHH HH+H
Sbjct: 962 LPASSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHPP 1021
Query: 51 ---------SGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAP---- 97
S PRL G S GPS + P P HH G G+
Sbjct: 1022 HPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGPA 1081
Query: 98 ------PPGCATLPRMPP--------DPYLQETRFEG---------PLPPPPPAAAAPPP 134
PP A+ P P +++T+ EG P P P A+ PP
Sbjct: 1082 LRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQPP 1141
Query: 135 PAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPG 194
PA A ++ +PT + G + G + +P T P G G +P
Sbjct: 1142 PAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPT--GGGGGGGSSPS 1199
Query: 195 GTGVTSTLPPPP 206
S +PP P
Sbjct: 1200 PAPAMSPVPPSP 1211
Score = 50.8 bits (120), Expect = 1e-06
Identities = 49/182 (26%), Positives = 64/182 (35%), Gaps = 48/182 (26%)
Query: 22 APQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATL----------PRLG-AGGLASSAAT 70
APQPP PP+P +A P + HHH H H L LG GL S +
Sbjct: 1373 APQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKS 1432
Query: 71 AQRGPSSS--ATLPRPPHHA-------------PPGPAAGAPPPGCATLPRMPP------ 109
P ++ + L R P A PP P G P + P P
Sbjct: 1433 LPASPPAARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHV 1492
Query: 110 ------DPYLQETRFEGP-------LPPPPPAAAAPPPPAPAQTAQAPG---FVVPTHAG 153
P T GP +PPP P + PP P + ++ G V+P A
Sbjct: 1493 RFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAP 1552
Query: 154 TV 155
+V
Sbjct: 1553 SV 1554
Score = 44.3 bits (103), Expect = 1e-04
Identities = 34/119 (28%), Positives = 45/119 (37%), Gaps = 21/119 (17%)
Query: 18 PPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSS 77
PP +P PA P PP AAPS + + +P + A S +++ R
Sbjct: 1127 PPAPSPTSPASPQPPPAVAAPS----------EKNSIPIPTIIIK--APSTSSSGRSSQG 1174
Query: 78 SATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPA 136
S+T PP P G + P M P P P P P P A+P PA
Sbjct: 1175 SSTEAEPPTQPEPTGGGGGGGSSPSPAPAMSPVP---------PSPSPVPTPASPSGPA 1224
Score = 42.7 bits (99), Expect = 4e-04
Identities = 66/272 (24%), Positives = 84/272 (30%), Gaps = 71/272 (26%)
Query: 1 MSSEKSGLPDSVP-------HTSPP--PYNAP---QPPAEPPAPPP-------QAAPSSH 41
+ S++ LP S P H PP P P Q EPPAP P AAP
Sbjct: 1426 LGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEP 1485
Query: 42 HHH--HHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHA----------- 88
H + ++ P G S PS ++P P
Sbjct: 1486 ERLPLHVRFLENCQPRAPVTSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLL 1545
Query: 89 ---PPGPAAGA-----------PPP---------GCATLPRMPPDPYLQETRFEGPLPPP 125
PP P+ PPP + L PP P PLPP
Sbjct: 1546 VLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDTPAPATPLPPV 1605
Query: 126 PPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVG 185
PP A A PP TA + + ++ V TL G APG P +P G
Sbjct: 1606 PPPAVAAAPPTLDSTASS----LTSYDSEVATLTQGASAAPGDP------------HPPG 1649
Query: 186 TPYAGGTPGGTGVTSTLPPPPQGPGLALLEPR 217
P PPP G+ ++ R
Sbjct: 1650 PPAPAAPAPAAPQPGPDPPPGTDSGIEEVDSR 1681
Score = 37.7 bits (86), Expect = 0.013
Identities = 51/199 (25%), Positives = 65/199 (32%), Gaps = 27/199 (13%)
Query: 51 SGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPG---------- 100
+G A P G ++ A + S P+PP PP P APPP
Sbjct: 1343 TGKALDPASPLGLALAARERALKESSEGGGAPQPPPR-PPSPRYEAPPPTPHHHSPHAHH 1401
Query: 101 ---CATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGT 157
PPDP +E + L + A PP A +P A VG
Sbjct: 1402 EPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPPAARRSLLHR----LPPTAPGVGP 1457
Query: 158 L--PLGGYVAPGYPLQLQPCTAYVPVYPVGTPY-----AGGTPGGTGVTSTLPPPPQGPG 210
L LG +P +P + P P P P + PP GPG
Sbjct: 1458 LLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVRFLENCQPRAPVTSGRGPPSEDGPG 1517
Query: 211 LALLEPRR--PPHDYMPIA 227
+ PRR PP P A
Sbjct: 1518 VPPPSPRRSVPPSPTSPRA 1536
Score = 36.2 bits (82), Expect = 0.037
Identities = 50/177 (28%), Positives = 62/177 (35%), Gaps = 47/177 (26%)
Query: 75 PSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETR---------FEGPLPP- 124
PSSS L P P P +G P P A+ P P +TR GPLPP
Sbjct: 939 PSSSGRLTPSPRGGPFNPGSGGPLP--ASSPASFDGPSPPDTRVGSREKSLYHSGPLPPA 996
Query: 125 ------------PPPAA----AAPPPPAPAQTAQAPGFVVPTHAGTVGTLP-LGGYVAPG 167
PPP A PP P +T +P P A +G P L G+ G
Sbjct: 997 HHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLA--LGPQPSLRGWRGGG 1054
Query: 168 YPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPP------PPQGPGLALLEPRR 218
P +P G+ GG G +S P PP+ A+ P R
Sbjct: 1055 PS----------PTPGAPSPSHHGSAGGGGGSSQGPALRYFQLPPRAASAAMYVPAR 1101
Score = 33.1 bits (74), Expect = 0.32
Identities = 30/87 (34%), Positives = 36/87 (41%), Gaps = 12/87 (13%)
Query: 60 GAGGLASSAATAQRGPSSSATL----PRPPHHAPPGPAAG-APPPGCATLPRMPPDPYLQ 114
G GG + + G SSA PRP H G A A P G A R + L+
Sbjct: 1309 GYGGYGAGSRAYGGGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAAR---ERALK 1365
Query: 115 ETRFEGPLPPPPPAAAAP----PPPAP 137
E+ G P PPP +P PPP P
Sbjct: 1366 ESSEGGGAPQPPPRPPSPRYEAPPPTP 1392
Score = 31.2 bits (69), Expect = 1.2
Identities = 34/126 (26%), Positives = 46/126 (36%), Gaps = 26/126 (20%)
Query: 60 GAGGLASSAATAQRGPSSSATLPRPPHHAPPG---PAAGAPPPGCATLPRM-----PPDP 111
G GGLAS +G ++ + P H A P P+ P PG + P
Sbjct: 840 GPGGLASLGKHRPKGFFATESSFDPHHRAQPSYERPSFLPPGPGLMLRQKSIGAAEDDRP 899
Query: 112 YLQETRFE----------GPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLG 161
YL + +PPPP + PP P T VP+ +G + P G
Sbjct: 900 YLAPPAMKFSRSLSVPGSEDIPPPPTTS---PPEPPYSTPP-----VPSSSGRLTPSPRG 951
Query: 162 GYVAPG 167
G PG
Sbjct: 952 GPFNPG 957
Score = 30.8 bits (68), Expect = 1.6
Identities = 18/59 (30%), Positives = 21/59 (35%)
Query: 92 PAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPT 150
P AG A P +PP P + L P PPPP P AQ + T
Sbjct: 1807 PTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASALAT 1865
Score = 30.4 bits (67), Expect = 2.0
Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 6/89 (6%)
Query: 55 TLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQ 114
T+ GAG A A GP ++ P P P P P ++LPR L
Sbjct: 1786 TVSVTGAGTDGLLALRACSGPPTAGVAGGPVAVEPEVPPV--PLPTASSLPRK----LLP 1839
Query: 115 ETRFEGPLPPPPPAAAAPPPPAPAQTAQA 143
GP PPP P A P + T +A
Sbjct: 1840 WEEGPGPPPPPLPGPLAQPQASALATVKA 1868
Score = 30.0 bits (66), Expect = 2.7
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 78 SATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFE----GPLPPPPPAAAAPP 133
S +P PP +PP P PP ++ R+ P P + F GPLP PA+ P
Sbjct: 917 SEDIPPPPTTSPPEPPYSTPPVPSSS-GRLTPSP--RGGPFNPGSGGPLPASSPASFDGP 973
Query: 134 PP 135
P
Sbjct: 974 SP 975
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 70.5 bits (171), Expect = 2e-12
Identities = 65/213 (30%), Positives = 73/213 (34%), Gaps = 40/213 (18%)
Query: 13 PHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQ 72
P PPP+ Q P P PPPQ P H HQ Q
Sbjct: 59 PIPPPPPHQQQQQPP-PQQPPPQQPPPHQPPPHPQPHQQ--------------------Q 97
Query: 73 RGPSSSATLPRPPHHAPPGPAAG---APPPGCATLPRMPPDPYLQETRFEGPLPPPPPAA 129
+ P +P PGPA G APP + P PP GP P PPPA
Sbjct: 98 QPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAV 157
Query: 130 AAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYA 189
+ PP AP T + G VPT G P PG P G P
Sbjct: 158 TSAPPGAPPPTPPSSG--VPTTPPQAGGPPPPPAAVPG------PGPGPKQGPGPGGPKG 209
Query: 190 GGTPGGTGVTSTLPPPPQGPGLALLEPR-RPPH 221
G PGG P P GPGL+ +PPH
Sbjct: 210 GKMPGG-------PKPGGGPGLSTPGGHPKPPH 235
Score = 65.9 bits (159), Expect = 4e-11
Identities = 63/211 (29%), Positives = 75/211 (35%), Gaps = 33/211 (15%)
Query: 9 PDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSA 68
P P PPP+ P +PP PP ++ G P +G+ ASS+
Sbjct: 79 PQQPPPHQPPPHPQPHQQQQPPPPPQDSSKP--------VVAQGPGPAPGVGSAPPASSS 130
Query: 69 ATAQRGPSSSATLPRPPHHAP-PGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPP 127
A P+S A P P P PA + PPG P PP + T + PPPPP
Sbjct: 131 APPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP--PPTPPSSGVPTTPPQAGGPPPPP 188
Query: 128 AAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTP 187
AA P P P Q P G G GG G P P P P
Sbjct: 189 AAVPGPGPGPKQG--------PGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKP------P 234
Query: 188 YAGGTPGGTGVTSTLP--------PPPQGPG 210
+ GG G P PPP GPG
Sbjct: 235 HRGGGEPRGGRQHHPPYHQQHHQGPPPGGPG 265
Score = 49.3 bits (116), Expect = 4e-06
Identities = 46/169 (27%), Positives = 57/169 (33%), Gaps = 36/169 (21%)
Query: 63 GLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPL 122
G+ + GP + P+PP PP PP P+ PP P
Sbjct: 37 GMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPP--------HQPP 88
Query: 123 PPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVY 182
P P P PPP P +++ P A VG+ P AP
Sbjct: 89 PHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP---------------- 132
Query: 183 PVGTPYAGGTPG-GTGVTSTLPP-----PPQGPGLALLEPRRPPHDYMP 225
P P +G PG G G T T PP PP P P PP +P
Sbjct: 133 PATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP------PPTPPSSGVP 175
Score = 33.9 bits (76), Expect = 0.19
Identities = 34/126 (26%), Positives = 39/126 (30%), Gaps = 18/126 (14%)
Query: 1 MSSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
++S G P P +S P PQ P PPP A P G G
Sbjct: 157 VTSAPPGAPPPTPPSSGVPTTPPQAGG--PPPPPAAVPG-----------PGPGPKQGPG 203
Query: 61 AGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEG 120
GG P L P H P G P G R PY Q+ +G
Sbjct: 204 PGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRG----GRQHHPPYHQQ-HHQG 258
Query: 121 PLPPPP 126
P P P
Sbjct: 259 PPPGGP 264
Score = 30.4 bits (67), Expect = 2.0
Identities = 21/73 (28%), Positives = 27/73 (36%), Gaps = 4/73 (5%)
Query: 17 PPPYNAP--QPPAEPPAPPPQAA--PSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQ 72
P P P P P PP + P HH YHQ P G GG + +
Sbjct: 216 PKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDS 275
Query: 73 RGPSSSATLPRPP 85
G ++ +L R P
Sbjct: 276 EGFKANLSLLRRP 288
>gi|42544130 splicing factor 1 isoform 1 [Homo sapiens]
Length = 639
Score = 69.7 bits (169), Expect = 3e-12
Identities = 70/245 (28%), Positives = 89/245 (36%), Gaps = 43/245 (17%)
Query: 7 GLPDSVPHTSPP-------------PYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGT 53
G P S PH P P P P +PP PP P HH G
Sbjct: 392 GGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHH-------GP 444
Query: 54 ATLPR-LGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPY 112
+ + LG+ + S +G P PP P +G PPP P P P
Sbjct: 445 PPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPP-----PPSGPLPP 499
Query: 113 LQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLP------LGGYVAP 166
Q+ + + P PPPP ++ A P P Q T AGT G++P +P
Sbjct: 500 WQQQQQQPPPPPPPSSSMASSTPLPWQQNTT---TTTTSAGT-GSIPPWQQQQAAAAASP 555
Query: 167 GYPLQLQPCTAYVPVYP-VGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMP 225
G P Q+Q VP+ P V P G P PPPP G+ P PP P
Sbjct: 556 GAP-QMQGNPTMVPLPPGVQPPLPPGAP-----PPPPPPPPGSAGMMYAPPPPPPPPMDP 609
Query: 226 IAVLT 230
+T
Sbjct: 610 SNFVT 614
Score = 58.2 bits (139), Expect = 9e-09
Identities = 48/169 (28%), Positives = 58/169 (34%), Gaps = 39/169 (23%)
Query: 17 PPPYNAPQPP----AEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLA-----SS 67
PPP + P PP + P PPP + S + Q+ T T G G + +
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQA 549
Query: 68 AATAQRGP----SSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLP 123
AA A G + +P PP PP P PPP P
Sbjct: 550 AAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPP-----------------------P 586
Query: 124 PPPPAAAA---PPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYP 169
PPPP +A PPP P FV G G P G AP P
Sbjct: 587 PPPPGSAGMMYAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPP 635
Score = 35.0 bits (79), Expect = 0.083
Identities = 46/175 (26%), Positives = 57/175 (32%), Gaps = 52/175 (29%)
Query: 76 SSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYL----QETR-------------- 117
S AT P P PA PPP + + P P++ E+R
Sbjct: 333 SGPATTPLASAPRPAAPANNPPPPSLMSTTQSRP-PWMNSGPSESRPYHGMHGGGPGGPG 391
Query: 118 -----FEGPLPP----------------PPPAAAAPPPPAPAQTAQAPGFVVPTHAGT-V 155
F PLP PPP PPPP Q PG P +
Sbjct: 392 GGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYL 451
Query: 156 GTLPLGGYVAPGYPLQLQPCTAYVPVYPVG-TPYAGGTPGGTGVTSTLPPPPQGP 209
G+ P+G V +L +P P+G P P G PPPP GP
Sbjct: 452 GSTPVGSGV-----YRLHQGKGMMPPPPMGMMPPPPPPPSGQP-----PPPPSGP 496
>gi|42544125 splicing factor 1 isoform 2 [Homo sapiens]
Length = 638
Score = 68.2 bits (165), Expect = 9e-12
Identities = 66/231 (28%), Positives = 85/231 (36%), Gaps = 42/231 (18%)
Query: 7 GLPDSVPHTSPP-------------PYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGT 53
G P S PH P P P P +PP PP P HH G
Sbjct: 392 GGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHH-------GP 444
Query: 54 ATLPR-LGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPY 112
+ + LG+ + S +G P PP P +G PPP P P P
Sbjct: 445 PPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQPPP-----PPSGPLPP 499
Query: 113 LQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLP------LGGYVAP 166
Q+ + + P PPPP ++ A P P Q T AGT G++P +P
Sbjct: 500 WQQQQQQPPPPPPPSSSMASSTPLPWQQNTT---TTTTSAGT-GSIPPWQQQQAAAAASP 555
Query: 167 GYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPR 217
G P Q+Q VP+ P P P G PPPP G ++ PR
Sbjct: 556 GAP-QMQGNPTMVPLPPGVQP-----PLPPGAPPPPPPPPPGSAGMMIPPR 600
Score = 48.5 bits (114), Expect = 7e-06
Identities = 43/149 (28%), Positives = 52/149 (34%), Gaps = 33/149 (22%)
Query: 6 SGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLA 65
SG P P PP+ Q PP PP + SS + Q+ T T G G +
Sbjct: 486 SGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASS---TPLPWQQNTTTTTTSAGTGSI- 541
Query: 66 SSAATAQRGPSSSATLPRPPHHAPPGPAAGAP-PPGCATLPRMPPDPYLQETRFEGPLPP 124
PP AA +P P P M P P G PP
Sbjct: 542 ------------------PPWQQQQAAAAASPGAPQMQGNPTMVPLP-------PGVQPP 576
Query: 125 PPPAAAAPPPPAPAQTAQAPGFVVPTHAG 153
PP A PPPP P +A G ++P G
Sbjct: 577 LPPGAPPPPPPPPPGSA---GMMIPPRGG 602
Score = 42.0 bits (97), Expect = 7e-04
Identities = 45/162 (27%), Positives = 58/162 (35%), Gaps = 27/162 (16%)
Query: 17 PPPYNAPQPP----AEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQ 72
PPP + P PP + P PPP + S + Q+ T T G G S Q
Sbjct: 490 PPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTG----SIPPWQ 545
Query: 73 RGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAP 132
+ +++A P P P PPG P +PP P PPPP P
Sbjct: 546 QQQAAAAASPGAPQ-MQGNPTMVPLPPGVQ--PPLPPG---------APPPPPP-----P 588
Query: 133 PPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQP 174
PP + G P+H PL PG Q +P
Sbjct: 589 PPGSAGMMIPPRGGDGPSHESEDFPRPL--VTLPGRQPQQRP 628
Score = 35.0 bits (79), Expect = 0.083
Identities = 46/175 (26%), Positives = 57/175 (32%), Gaps = 52/175 (29%)
Query: 76 SSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYL----QETR-------------- 117
S AT P P PA PPP + + P P++ E+R
Sbjct: 333 SGPATTPLASAPRPAAPANNPPPPSLMSTTQSRP-PWMNSGPSESRPYHGMHGGGPGGPG 391
Query: 118 -----FEGPLPP----------------PPPAAAAPPPPAPAQTAQAPGFVVPTHAGT-V 155
F PLP PPP PPPP Q PG P +
Sbjct: 392 GGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYL 451
Query: 156 GTLPLGGYVAPGYPLQLQPCTAYVPVYPVG-TPYAGGTPGGTGVTSTLPPPPQGP 209
G+ P+G V +L +P P+G P P G PPPP GP
Sbjct: 452 GSTPVGSGV-----YRLHQGKGMMPPPPMGMMPPPPPPPSGQP-----PPPPSGP 496
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 67.4 bits (163), Expect = 2e-11
Identities = 70/245 (28%), Positives = 90/245 (36%), Gaps = 37/245 (15%)
Query: 9 PDSVPHTSPPPYNAP-QPPAEPPAPP-PQAAPSSHHHHHHHYHQSGTATLPRLGAGGLAS 66
P + P + PP AP PPA PP P +P + + H Q+ + P S
Sbjct: 619 PQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFS 678
Query: 67 SAATAQRGPSSSA------TLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEG 120
A+ PS++ +L PP PP P A P AT P P P
Sbjct: 679 PPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVP 738
Query: 121 PLPPPPPA---AAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLG--------GYVAPGYP 169
P PP P +A PPP P A P V P+ ++ PL P P
Sbjct: 739 PSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATP--P 796
Query: 170 LQLQPC-------------TAYVPVYPVGTPYAGGTPGGTGVTSTLPP-PPQGPGLALLE 215
LQ P +A +P+ P+ TP P +PP PP P L
Sbjct: 797 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASP--TLQA 854
Query: 216 PRRPP 220
PRRPP
Sbjct: 855 PRRPP 859
Score = 64.7 bits (156), Expect = 1e-10
Identities = 67/245 (27%), Positives = 85/245 (34%), Gaps = 50/245 (20%)
Query: 4 EKSGLPDSVPHTSPPPYNAPQPPAEPPAP---PPQAAPSSHHHHHHHYHQSGTATLPRLG 60
+ + P + PH PP AP P PP+P PP PSS AT P
Sbjct: 547 QTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSS------------IATPPPQA 594
Query: 61 AGGLASS----------AATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCAT------- 103
LAS + A P + L PP APP P A P AT
Sbjct: 595 PPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPN 654
Query: 104 --------LPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTV 155
P PP + F P PP +A PP AP A P V P+ +
Sbjct: 655 ALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP 714
Query: 156 GTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLE 215
P+ P P Q P A P+ +P P ++ + PPP+ P L
Sbjct: 715 ---PMSPSATP--PPQAPPPLAAPPLQVPPSP-----PASPPMSPSATPPPRVPPLLAAP 764
Query: 216 PRRPP 220
P + P
Sbjct: 765 PLQVP 769
Score = 58.5 bits (140), Expect = 7e-09
Identities = 74/241 (30%), Positives = 90/241 (37%), Gaps = 40/241 (16%)
Query: 2 SSEKSGLPDSVPHTS-PPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
S S P S P S P P+ PA P P P+ + + T PR
Sbjct: 241 SLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQAL---------RPPQVTPPRKD 291
Query: 61 AG---GLASSAATAQRGPSSSATLPRPP--HHAPPGPAAGAPPPGCAT-LPRMPPDPYLQ 114
A G SS+ A PS + P PP + A P PA P P AT LP PP P
Sbjct: 292 AAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAP 351
Query: 115 ETRFEGPLPPPPPAAAAPP----PP--APAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGY 168
+ P PP P + APP PP AP P VP H+ T +L AP
Sbjct: 352 PSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVP-HSLTSPSLQ-----APPS 405
Query: 169 PLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRP---PHDYMP 225
PL L A + G+P S L P+ +L P RP P D P
Sbjct: 406 PLALSSLQATTSL---------GSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPP 456
Query: 226 I 226
+
Sbjct: 457 L 457
Score = 53.5 bits (127), Expect = 2e-07
Identities = 59/215 (27%), Positives = 73/215 (33%), Gaps = 23/215 (10%)
Query: 19 PYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAG-------GLASSA--- 68
P AP PP P+ + SS H P G G L+SSA
Sbjct: 190 PRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPL 249
Query: 69 -ATAQRGPSSSATLPRPPHHAPPGP-AAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPP 126
+ A+ GPS+ T P H + P P A P T PR P L P P
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 309
Query: 127 PAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGT 186
A P P P A +P LPL +P P LQ + P T
Sbjct: 310 SGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAP-PSPSAPPSLQTLPS-----PPAT 363
Query: 187 PYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPH 221
P + P + T PP P L + P + PH
Sbjct: 364 PPSQAPP-----SMTTPPMQAPPSLQTIPPIQVPH 393
Score = 51.6 bits (122), Expect = 9e-07
Identities = 77/268 (28%), Positives = 90/268 (33%), Gaps = 70/268 (26%)
Query: 1 MSSEKSGLPDSVPHTSPPPYNA-PQPPAEPP----------------APPPQAAPSSHHH 43
MS + P + P + PP P PPA PP APP Q PS
Sbjct: 716 MSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSP--- 772
Query: 44 HHHHYHQSGTATLPRLGAGGLASSAATAQRGP----------SSSATLPRPPHHAPP--- 90
S A P LA+ A P S SA+LP P PP
Sbjct: 773 -PASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 831
Query: 91 GPAAGAP-------PPGCATL--PRMPPDPYLQETRFEGP------LPPPPPAAAAPPPP 135
P AP PP TL PR PP P +T GP P PPP PP
Sbjct: 832 PPVLAAPLLQVPPSPPASPTLQAPRRPPTPG-PDTSVSGPRLTLALAPGPPP----PPSR 886
Query: 136 APAQTAQAPGFVVPTHAGTVGTLPLGGY---------VAPGYPLQLQPCTAYVPVYPVGT 186
+P+ T P + + T L GY +P +L C
Sbjct: 887 SPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAP 946
Query: 187 PYA-GGTPGGTGVTSTLP-PPPQGPGLA 212
P A G PG + LP PP GPG A
Sbjct: 947 PLAFRGAPG-----APLPWPPATGPGSA 969
Score = 49.7 bits (117), Expect = 3e-06
Identities = 56/221 (25%), Positives = 77/221 (34%), Gaps = 30/221 (13%)
Query: 8 LPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASS 67
+P +S P + PPA PP + LP L L ++
Sbjct: 509 MPPLETQSSLAPPSLQTPPASLTTPPLE-------------------NLPSLAPPPLQTA 549
Query: 68 AATAQRGPSSSATLPRP-PHHAPPGPAAGAPPPGCATLPRMPPD--PYLQETRFEGPLPP 124
+A + P P P APP P PP +++ PP P L +G P
Sbjct: 550 SAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSP 609
Query: 125 PPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQ-----LQPCTAYV 179
P A PPP AP A P P+ + PL +P P LQ +
Sbjct: 610 PLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPL-ATPSPQAPNALAVHLLQAPFSPP 668
Query: 180 PVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
P PV P++ P V+ + PP Q P P + P
Sbjct: 669 PSPPVQAPFS--PPASPPVSPSATPPSQAPPSLAAPPLQVP 707
Score = 47.0 bits (110), Expect = 2e-05
Identities = 64/240 (26%), Positives = 82/240 (34%), Gaps = 50/240 (20%)
Query: 11 SVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAAT 70
S P ++PP Q P PA PP S S T+ L A L+S A+
Sbjct: 445 SRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVS----PLSSPLTIHPLQA--LSSLASH 498
Query: 71 AQRGPSSSATLP---RPPHHAPPG---PAAGAPPPGCATLPRMPP-----------DPYL 113
+ + P SS +P APP P A P LP + P P+L
Sbjct: 499 SPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHL 558
Query: 114 QETRFEGPLP--PPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQ 171
+ P P PP PPP P+ A P P + + PL G +P
Sbjct: 559 ETPPCPAPCPLQAPPSPLTTPPPETPSSIATPP----PQAPPALASPPLQGLPSP----- 609
Query: 172 LQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPP---PPQGPGLALLEPRRPPHDYMPIAV 228
P+ P+ TP P LPP PP P L P P P A+
Sbjct: 610 --------PLSPLATPPPQAPP-----XLALPPLQAPPSPPASPPLSPLATPSPQAPNAL 656
Score = 38.5 bits (88), Expect = 0.008
Identities = 37/138 (26%), Positives = 46/138 (33%), Gaps = 28/138 (20%)
Query: 5 KSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGL 64
K+G P P P+PP P PPP A L LGA G
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPRPPPPVT----------------PAALRVLGAAGA 52
Query: 65 ASSAATAQR-GPSSSATLPRPPHHAPPGPAAG-------APPPGCATLPRMPPDPYLQET 116
A+R G AT+P A P +AG + PP R PP +
Sbjct: 53 VGRKPLAERAGGIGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPP----AKN 108
Query: 117 RFEGPLPPPPPAAAAPPP 134
GP+ P A+ P
Sbjct: 109 TSPGPVSSPGRASGTTRP 126
Score = 29.6 bits (65), Expect = 3.5
Identities = 31/109 (28%), Positives = 36/109 (33%), Gaps = 21/109 (19%)
Query: 117 RFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPL----GGYVAPGYPLQL 172
R G L P PP + PPPP + G AG VG PL GG P
Sbjct: 20 RAPGLLTPRPPGSPRPPPPVTPAALRVLG-----AAGAVGRKPLAERAGGIGGATIP--- 71
Query: 173 QPCTAYVPVYPVGT---------PYAGGTPGGTGVTSTLPPPPQGPGLA 212
+ P GT P +G +T P P PG A
Sbjct: 72 ESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRA 120
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 67.4 bits (163), Expect = 2e-11
Identities = 66/242 (27%), Positives = 80/242 (33%), Gaps = 34/242 (14%)
Query: 11 SVPHTSPPPYNAPQPPAEPPAPPP---QAAPSSHH------------HHHHHYHQSGTAT 55
S P PPP P PP PP PPP Q+APS+ + SG
Sbjct: 625 SPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALF 684
Query: 56 LPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAG----APPPGCATLPRM--PP 109
P + S P + P PP PP P + P P +LP+ PP
Sbjct: 685 KPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPP 744
Query: 110 DP-----YLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYV 164
P T+ P PPPPP AP PP Q P +P T P+
Sbjct: 745 PPLKIHQVQHITQVAPPTPPPPPPIPAPLPP---QAPPKPLVTIPAPTSTKTVAPVVTQA 801
Query: 165 APGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYM 224
AP P P P +P A P PPP P + PP
Sbjct: 802 APPTPTPPVPPAKKQPAFP-----ASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLS 856
Query: 225 PI 226
P+
Sbjct: 857 PV 858
Score = 50.4 bits (119), Expect = 2e-06
Identities = 60/218 (27%), Positives = 74/218 (33%), Gaps = 45/218 (20%)
Query: 23 PQPPAEPPAP---PPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSA 79
P PP PP P PPQA P T+P + + T P+
Sbjct: 761 PTPPPPPPIPAPLPPQAPPKP------------LVTIPAPTSTKTVAPVVTQAAPPTP-- 806
Query: 80 TLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPP-----------A 128
T P PP P A PP T P P P L + + PPP P A
Sbjct: 807 TPPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIA 866
Query: 129 AAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVP-VYPVGTP 187
+ PPPP P P VP + VAP P ++ + P PV +P
Sbjct: 867 SQFPPPPTPPAMESQPLKPVPAN------------VAPQSPPAVKAKPKWQPSSIPVPSP 914
Query: 188 YAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMP 225
P + + PPPP P A P PP P
Sbjct: 915 DFPPPPPESSL--VFPPPPPSPVPA--PPPPPPPTASP 948
Score = 48.5 bits (114), Expect = 7e-06
Identities = 37/131 (28%), Positives = 47/131 (35%), Gaps = 9/131 (6%)
Query: 90 PGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVP 149
P P P P +PP P P PPPPP PPPP P+Q+A + G P
Sbjct: 611 PQPKIVTPYTASQPSPPLPPPP--------PPPPPPPPPPPPPPPPLPSQSAPSAGSAAP 662
Query: 150 THAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGP 209
T+ + +P T V P P G PPPP P
Sbjct: 663 MFV-KYSTITRLQNASQHSGALFKPPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTP 721
Query: 210 GLALLEPRRPP 220
G A+ + + P
Sbjct: 722 GSAMAQLKPAP 732
Score = 41.6 bits (96), Expect = 9e-04
Identities = 41/147 (27%), Positives = 47/147 (31%), Gaps = 30/147 (20%)
Query: 17 PPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPS 76
P Y P PP P PP P QS A P L+ + ++ S
Sbjct: 820 PASYIPPSPPTPPVPVPPPTLPKQ---------QSFCAKPP---PSPLSPVPSVVKQIAS 867
Query: 77 SSATLPRPP----HHAPPGPAAGAP--PPGCATLPR------------MPPDPYLQETRF 118
P PP P PA AP PP P+ PP P F
Sbjct: 868 QFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLVF 927
Query: 119 EGPLPPPPPAAAAPPPPAPAQTAQAPG 145
P P P PA PPPP + T G
Sbjct: 928 PPPPPSPVPAPPPPPPPTASPTPDKSG 954
Score = 39.7 bits (91), Expect = 0.003
Identities = 54/210 (25%), Positives = 77/210 (36%), Gaps = 41/210 (19%)
Query: 4 EKSGLPDSVPHTSPPPYNA-----PQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPR 58
+ S +P P PPP + P PP+ PAPPP P++ + T +
Sbjct: 905 QPSSIPVPSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTA------------SPTPDK 952
Query: 59 LGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRF 118
G+ G +S ++ P P P ++ ++GA P P+ P L ++F
Sbjct: 953 SGSPGKKTSKTSS---PGGKKPPPTPQRNSSIKSSSGAEHPE----PKRPSVDSL-VSKF 1004
Query: 119 EGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAY 178
P P+ PPPA AP G L L G PG LQ +A
Sbjct: 1005 TPPAESGSPSKETLPPPA------AP--------PKPGKLNLSGVNLPGV-LQQGCVSAK 1049
Query: 179 VPVYP-VGTPYAGGTPGGTGVTSTLPPPPQ 207
PV G P + PPPP+
Sbjct: 1050 APVLSGRGKDSVVEFPSPPSDSDFPPPPPE 1079
Score = 38.5 bits (88), Expect = 0.008
Identities = 56/229 (24%), Positives = 73/229 (31%), Gaps = 33/229 (14%)
Query: 17 PPPYNAPQPPAEPPAP-PPQAAPSSHHHHHHHYHQSGTATLPRLGAGGL-ASSAATAQRG 74
PPP P ++P P P AP S P+ + S
Sbjct: 870 PPPPTPPAMESQPLKPVPANVAPQS---------PPAVKAKPKWQPSSIPVPSPDFPPPP 920
Query: 75 PSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGP---LPPPPP---- 127
P SS P PP P P PPP + P P + ++ P PPP P
Sbjct: 921 PESSLVFPPPPPSPVPAPPP-PPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNS 979
Query: 128 ------AAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVP- 180
A P P P+ + F P +G+ L AP P +L +P
Sbjct: 980 SIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNLPG 1039
Query: 181 VYPVGTPYA-GGTPGGTGVTSTL--PPPPQGPGLALLEPRRPPHDYMPI 226
V G A G G S + P PP P PP +P+
Sbjct: 1040 VLQQGCVSAKAPVLSGRGKDSVVEFPSPPSDSDF----PPPPPETELPL 1084
Score = 32.3 bits (72), Expect = 0.54
Identities = 41/161 (25%), Positives = 47/161 (29%), Gaps = 40/161 (24%)
Query: 13 PHTSPPPYNAPQPPAEP---PAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAA 69
P P P AP PP P P P +P P+ + +SS A
Sbjct: 928 PPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGA 987
Query: 70 -------------------TAQRGPSSSATLPRPPHHAPPGPA---------AGAPPPGC 101
A+ G S TLP P APP P G GC
Sbjct: 988 EHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPA--APPKPGKLNLSGVNLPGVLQQGC 1045
Query: 102 --ATLPRMPPDPYLQETRFEGP-----LPPPPPAAAAPPPP 135
A P + F P PPPPP P PP
Sbjct: 1046 VSAKAPVLSGRGKDSVVEFPSPPSDSDFPPPPPETELPLPP 1086
>gi|156523246 proline-rich transmembrane protein 2 [Homo sapiens]
Length = 340
Score = 65.9 bits (159), Expect = 4e-11
Identities = 77/311 (24%), Positives = 115/311 (36%), Gaps = 24/311 (7%)
Query: 3 SEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGT-----ATLP 57
SE P V P APQP A P + P + +G AT
Sbjct: 28 SEAETGPPQVLAGVPDQPEAPQPGPNTTAAPVDSGPKAGLAPETTETPAGASETAQATDL 87
Query: 58 RLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAA---GAPPPGCATLPRMPPDPYLQ 114
L GG + + + + + + P A + A PP A P PDP
Sbjct: 88 SLSPGGESKANCSPEDPCQETVSKPEVSKEATADQGSRLESAAPPEPAPEPAPQPDPRPD 147
Query: 115 ETRFEGP-LPPPPPAAAAPPPPAPAQTA---QAPGFVVPTHAGTVGTLPLGGYVAPGYPL 170
P L P P P P +++ Q G VVP AG P +P P
Sbjct: 148 SQPTPKPALQPELPTQEDPTPEILSESVGEKQENGAVVPLQAGDGEEGPAPEPHSP--PS 205
Query: 171 QLQPCTAYVPVYPVGTPYA--------GGTPGGTGVTSTLPPPPQ--GPGLALLEPRRPP 220
+ P P + G PG + + P Q GPG+ E + P
Sbjct: 206 KKSPPANGAPPRVLQQLVEEDRMRRAHSGHPGSPRGSLSRHPSSQLAGPGVEGGEGTQKP 265
Query: 221 HDYMPIAVLTTICCFWPTGIIAIFKAVQVRTALARGDMVSAEIASREARNFSFISLAVGI 280
DY+ +A+L+ C WP I+A AV R +L +GD+ A+ R A+ S ++L G+
Sbjct: 266 RDYIILAILSCFCPMWPVNIVAFAYAVMSRNSLQQGDVDGAQRLGRVAKLLSIVALVGGV 325
Query: 281 AAMVLCTILTV 291
++ ++ +
Sbjct: 326 LIIIASCVINL 336
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/103 (26%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 1 MSSEKSGLPDSVPHTSPPPYNAPQPPAEP-PAPPPQAAPSSHHHHHHHYHQSGTATLPRL 59
+S E + S ++ PP AP+P +P P P Q P + T +
Sbjct: 114 VSKEATADQGSRLESAAPPEPAPEPAPQPDPRPDSQPTPKPALQPELPTQEDPTPEILSE 173
Query: 60 GAGGLASSAATAQRGPSSSATLPRPPHHAPPG----PAAGAPP 98
G + A P P H+PP PA GAPP
Sbjct: 174 SVGEKQENGAVVPLQAGDGEEGPAPEPHSPPSKKSPPANGAPP 216
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 65.5 bits (158), Expect = 6e-11
Identities = 71/217 (32%), Positives = 81/217 (37%), Gaps = 38/217 (17%)
Query: 17 PPPYNAPQ--PPAEPPAP-----PPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLAS--- 66
PPP + PP PP P PP P + G LP L G+
Sbjct: 899 PPPLQGTEMLPPPPPPLPGAGIPPPPPLPGA-----------GILPLPPLPGAGIPPPPP 947
Query: 67 --SAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPP 124
AA P A +P PP P P AG PPP +PP P L P PP
Sbjct: 948 LPGAAIPPPPPLPGAGIPLPP----PLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPPP 1001
Query: 125 PPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPL-GGYVAPGYPLQLQPCTAYVPVYP 183
P P A PPPP P A P AG PL G + P PL P P P
Sbjct: 1002 PLPGAGIPPPP-PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL---PGAGIPPPPP 1057
Query: 184 VGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
+ P AG P + +PPPP PG + P PP
Sbjct: 1058 L--PGAGIPPPPPLPGAGIPPPPPLPGAGI--PPPPP 1090
Score = 65.1 bits (157), Expect = 8e-11
Identities = 66/215 (30%), Positives = 79/215 (36%), Gaps = 23/215 (10%)
Query: 17 PPPY---NAPQPPAEPPA--PPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATA 71
PPP P PP P A PPP P + +G P L G+
Sbjct: 1022 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1081
Query: 72 QRG-----PSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPP 126
G P A +P PP P P G PPP +PP P L P PPP
Sbjct: 1082 GAGIPPPPPLPGAGIPPPP----PLPGVGIPPPPPLPGAGIPPPPPLPGAGI--PPPPPL 1135
Query: 127 PAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPL-GGYVAPGYPLQLQPCTAYVPVYPVG 185
P A PPPP + P +P AG PL G + P PL P+ VG
Sbjct: 1136 PGAGIPPPPPLPRVGIPPPPPLPG-AGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVG 1194
Query: 186 TPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
P PG + +PPPP PG+ + PP
Sbjct: 1195 IPPPPPLPG-----AGIPPPPPLPGMGIPPAPAPP 1224
Score = 64.3 bits (155), Expect = 1e-10
Identities = 70/227 (30%), Positives = 82/227 (36%), Gaps = 28/227 (12%)
Query: 8 LPDSVPHTSPPP------YNAPQPPAEPPA--PPPQAAPSSHHHHHHHYHQSGTATLPRL 59
LP +P PP P PP P A PPP P + +G P L
Sbjct: 966 LPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1025
Query: 60 GAGGLASSAATAQRG-----PSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQ 114
G+ G P A +P PP P P AG PPP +PP P L
Sbjct: 1026 PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP----PLPGAGIPPPPPLPGAGIPPPPPLP 1081
Query: 115 ETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPL-GGYVAPGYPLQLQ 173
P PPP P A PPPP P +P AG PL G + P PL
Sbjct: 1082 GAGI--PPPPPLPGAGIPPPPPLPGVGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPGA 1138
Query: 174 PCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
P+ VG P PG + +PPPP PG + P PP
Sbjct: 1139 GIPPPPPLPRVGIPPPPPLPG-----AGIPPPPPLPGAGI--PPPPP 1178
Score = 62.4 bits (150), Expect = 5e-10
Identities = 69/215 (32%), Positives = 80/215 (37%), Gaps = 24/215 (11%)
Query: 17 PPPY---NAPQPPAEPPA--PPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATA 71
PPP P PP P A PPP P + +G P L G+
Sbjct: 956 PPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP--- 1012
Query: 72 QRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAA 131
P A +P PP P P AG PPP +PP P L P PPP P A
Sbjct: 1013 ---PLPGAGIPPPP----PLPGAGIPPPPPLPGAGIPPPPPLPGAGI--PPPPPLPGAGI 1063
Query: 132 PPPPAPAQTAQAPGFVVPTHAGTVGTLPL-GGYVAPGYPLQLQPCTAYVPVYPVGTPYAG 190
PPPP P A P AG PL G + P PL P P P+ P AG
Sbjct: 1064 PPPP-PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL---PGVGIPPPPPL--PGAG 1117
Query: 191 GTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMP 225
P + +PPPP PG + P P +P
Sbjct: 1118 IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIP 1152
Score = 62.0 bits (149), Expect = 6e-10
Identities = 68/215 (31%), Positives = 77/215 (35%), Gaps = 25/215 (11%)
Query: 17 PPPY---NAPQPPAEPPA--PPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATA 71
PPP P PP P A PPP P + +G P L G+
Sbjct: 1011 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1070
Query: 72 QRG-----PSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPP 126
G P A +P PP P P AG PPP +PP P L P PPP
Sbjct: 1071 GAGIPPPPPLPGAGIPPPP----PLPGAGIPPPPPLPGVGIPPPPPLPGAGI--PPPPPL 1124
Query: 127 PAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPL-GGYVAPGYPLQLQPCTAYVPVYPVG 185
P A PPPP P A P G PL G + P PL P+ VG
Sbjct: 1125 PGAGIPPPP-PLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVG 1183
Query: 186 TPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
P PG +PPPP PG + P PP
Sbjct: 1184 IPPPPPLPG-----VGIPPPPPLPGAGI--PPPPP 1211
Score = 57.4 bits (137), Expect = 2e-08
Identities = 59/214 (27%), Positives = 78/214 (36%), Gaps = 32/214 (14%)
Query: 11 SVPHTSPPP---YNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASS 67
S+ PPP ++A Q +P + PP + + H H S + +
Sbjct: 806 SISQPPPPPSLLWSAGQ--GQPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPC 863
Query: 68 AATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPP 127
++ P P PP P P P +P+ PP LQ T P PPP P
Sbjct: 864 TESSSSMPGLGMVPPPPP----PLPGMTVPTLPSTAIPQPPP---LQGTEMLPPPPPPLP 916
Query: 128 AAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPL-GGYVAPGYPLQLQPCTAYVPVYPVGT 186
A PPPP PG AG + PL G + P PL P+ G
Sbjct: 917 GAGIPPPP------PLPG------AGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGI 964
Query: 187 PYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
P PG + +PPPP PG + P PP
Sbjct: 965 PLPPPLPG-----AGIPPPPPLPGAGI--PPPPP 991
Score = 50.4 bits (119), Expect = 2e-06
Identities = 53/192 (27%), Positives = 65/192 (33%), Gaps = 30/192 (15%)
Query: 17 PPPY---NAPQPPAEPPA--PPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATA 71
PPP P PP P A PPP P + + G P L G+
Sbjct: 1110 PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLP 1169
Query: 72 QRGPSSSATLPR---PPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRF-EGPLPP-PP 126
G LP PP PP P G PPP +PP P L P PP PP
Sbjct: 1170 GAGIPPPPPLPGVGIPP--PPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPP 1227
Query: 127 PAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQL-------------- 172
P PPP P P + + T+ T + G++ P P L
Sbjct: 1228 PGTGIPPP--PLLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLPSGLFGLGMNQDKGSRKQ 1285
Query: 173 --QPCTAYVPVY 182
+PC P+Y
Sbjct: 1286 PIEPCRPMKPLY 1297
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 65.1 bits (157), Expect = 8e-11
Identities = 62/226 (27%), Positives = 73/226 (32%), Gaps = 12/226 (5%)
Query: 9 PDSVPHTSPPPYNAPQPP-AEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASS 67
P + T+PPP P PP PPP PS + T + P S
Sbjct: 1424 PPTTTTTTPPPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTT----TPSP 1479
Query: 68 AATAQRGPSSSATLPRP-PHHAPPGPAAGAPPPGCATL-PRMPPDPYLQETRFEGPLPPP 125
T P+++ T P P +PP PP TL P P P T P P
Sbjct: 1480 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTP 1539
Query: 126 PPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVG 185
P P P P T P P+ T T P P P P P
Sbjct: 1540 SPPTTTPITP-PTSTTTLPPTTTPSPPPTTTTTP-PPTTTPSPPTTTTPSP---PTITTT 1594
Query: 186 TPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMPIAVLTT 231
TP TP T+T PPP P P PP + TT
Sbjct: 1595 TPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1640
Score = 64.3 bits (155), Expect = 1e-10
Identities = 58/226 (25%), Positives = 73/226 (32%), Gaps = 9/226 (3%)
Query: 15 TSPPPYNAPQPPAEPPAPP---PQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATA 71
T+PPP P PP P+PP P ++ S T P + T
Sbjct: 1462 TTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTT 1521
Query: 72 QRGPSSSATLPRPPHHAPPGPAAG--APPPGCATLP--RMPPDPYLQETRFEGPLPPPPP 127
P ++ T PP P P PP TLP P P T P PP
Sbjct: 1522 TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPP 1581
Query: 128 AAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTP 187
P PP T P T T P +P + P T+ + P TP
Sbjct: 1582 TTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTP 1641
Query: 188 YAGGTPGGTGVTSTLPPPP--QGPGLALLEPRRPPHDYMPIAVLTT 231
T T +T P PP P + PP P + +TT
Sbjct: 1642 SPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITT 1687
Score = 55.5 bits (132), Expect = 6e-08
Identities = 72/249 (28%), Positives = 85/249 (34%), Gaps = 45/249 (18%)
Query: 9 PDSVPHTSPPPYNAPQPPA----EPPA-----PPPQAAPSSHHHHHHHYHQSGTATLPRL 59
P T+PPP P PP PP PPP PS + T T P
Sbjct: 1564 PPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPP--------TTTTTTPPPT 1615
Query: 60 GAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMP----PDPYLQE 115
+ T P+S+ TLP +PP PPP T P P P P +
Sbjct: 1616 TTP--SPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPP--TTTPSPPTTTTPSPPITT 1671
Query: 116 TRFEGP-LPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQP 174
T P P P P PP T +P P+ T T P P P P
Sbjct: 1672 TTTPPPTTTPSSPITTTPSPPTTTMTTPSP-TTTPSSPITTTTTP-SSTTTPSPP----P 1725
Query: 175 CTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLAL--LEPRRPPHDYMPIAVL--T 230
T P P TP +P T +T TLPP L L P P + P + T
Sbjct: 1726 TTMTTP-SPTTTP----SPPTTTMT-TLPPTTTSSPLTTTPLPPSITPPTFSPFSTTTPT 1779
Query: 231 TIC---CFW 236
T C C W
Sbjct: 1780 TPCVPLCNW 1788
Score = 53.9 bits (128), Expect = 2e-07
Identities = 51/205 (24%), Positives = 63/205 (30%), Gaps = 26/205 (12%)
Query: 8 LPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASS 67
LP + + PP PP P+PP PS + T T P
Sbjct: 1556 LPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSP---------PTITTTTP---------P 1597
Query: 68 AATAQRGPSSSATLPRP-PHHAPPGPAAGAPPPGCATLP--RMPPDPYLQETRFEGPLPP 124
T P+++ T P P +PP PP TLP P P T P
Sbjct: 1598 PTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTP 1657
Query: 125 PPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPV 184
PP P PP T P + T + P P T P+
Sbjct: 1658 SPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPS-----PTTTPSSPITTT 1712
Query: 185 GTPYAGGTPGGTGVTSTLPPPPQGP 209
TP + TP T T P P P
Sbjct: 1713 TTPSSTTTPSPPPTTMTTPSPTTTP 1737
Score = 53.5 bits (127), Expect = 2e-07
Identities = 56/226 (24%), Positives = 70/226 (30%), Gaps = 13/226 (5%)
Query: 16 SPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGP 75
SPP PP PP PS + T T P T P
Sbjct: 1400 SPPTTTPSPPPTSTTTLPPTTTPSP---------PTTTTTTPPPTTTPSPPITTTTTPPP 1450
Query: 76 SSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPP 135
+++ + P PP +PP + P P P T P P P P P
Sbjct: 1451 TTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITP 1510
Query: 136 APAQTAQAPGFVVPTHAGTVGTLPLGGYV-APGYPLQLQPCTAYVPVYPVGTPYAGGTPG 194
PA T P P+ T T P +P + P T+ + P TP T
Sbjct: 1511 -PASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTT 1569
Query: 195 GTGVTSTLPPPP--QGPGLALLEPRRPPHDYMPIAVLTTICCFWPT 238
T +T P PP P + PP P TT PT
Sbjct: 1570 TTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPT 1615
Score = 50.8 bits (120), Expect = 1e-06
Identities = 45/184 (24%), Positives = 57/184 (30%), Gaps = 17/184 (9%)
Query: 23 PQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLP 82
P PP P+PPP + T TLP ++ T P+++ + P
Sbjct: 1399 PSPPTTTPSPPP----------------TSTTTLPPTTTPSPPTTTTTTPP-PTTTPSPP 1441
Query: 83 RPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQ 142
PP +PP T P P T P P P P P T
Sbjct: 1442 ITTTTTPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPS 1501
Query: 143 APGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTL 202
P T + TLP +P P P P TP T T +T
Sbjct: 1502 PPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTT 1561
Query: 203 PPPP 206
P PP
Sbjct: 1562 PSPP 1565
Score = 30.8 bits (68), Expect = 1.6
Identities = 38/167 (22%), Positives = 49/167 (29%), Gaps = 28/167 (16%)
Query: 16 SPPPYNAPQPPAEP--------PAPPP---QAAPSSHHHHHHHYHQSGTATLPRLGAGGL 64
+P P P P P P P Q P +H + TA + L
Sbjct: 4164 TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTGPPTH---------TSTAPIAELTTSNP 4214
Query: 65 ASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPD-PYLQETRFEGPLP 123
++T Q S+S+ L PP PP P T G
Sbjct: 4215 PPESSTPQTSRSTSSPLTEST------TLLSTLPPAIEMTSTAPPSTPTAPTTTSGGHTL 4268
Query: 124 PPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPL 170
PPP+ PP P + PT TV T + PL
Sbjct: 4269 SPPPSTTTSPPGTPTRGTTTGSSSAPT-PSTVQTTTTSAWTPTPTPL 4314
Score = 30.4 bits (67), Expect = 2.0
Identities = 42/157 (26%), Positives = 47/157 (29%), Gaps = 26/157 (16%)
Query: 85 PHHAPPGPAAGAPPPGCATLPRMP-PDPYLQETRFEGPL-------PPPPPAAAAPPPPA 136
P P G P T P P P +T P+ P P P P
Sbjct: 4071 PTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 4130
Query: 137 PAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGT 196
P T V PT T P P T V P TP TP T
Sbjct: 4131 PITTTTT---VTPTPTPTGTQTPT-----------TTPITTTTTVTPTPTPTGTQTPTTT 4176
Query: 197 GV--TSTLPPPPQGPGLALLEPRRPPHDYMPIAVLTT 231
+ T+T+ P P G P PIA LTT
Sbjct: 4177 PITTTTTVTPTPTPTGTQTGPPTHT--STAPIAELTT 4211
Score = 28.9 bits (63), Expect = 6.0
Identities = 30/125 (24%), Positives = 34/125 (27%), Gaps = 16/125 (12%)
Query: 82 PRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTA 141
P PP P P T + P + T P P P P T
Sbjct: 1893 PTPPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTT 1952
Query: 142 QAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTST 201
P PT GT P T V P TP TP T +T+T
Sbjct: 1953 VTP---TPTPTGTQTPTTT-------------PITTTTTVTPTPTPTGTQTPTTTPITTT 1996
Query: 202 LPPPP 206
P
Sbjct: 1997 TTVTP 2001
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 65.1 bits (157), Expect = 8e-11
Identities = 52/160 (32%), Positives = 64/160 (40%), Gaps = 24/160 (15%)
Query: 2 SSEKSGLPDSVPHTSPPPY-NAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
S + +P P + PP + P+P A APPP PS SG PRL
Sbjct: 276 SIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLP 335
Query: 61 AGGLASSAATAQR-GPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPP---------- 109
L+ S++T P S LP PP PP P PP LP PP
Sbjct: 336 QRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD-PPGRSGPLPPPPPVSRNGSTSRA 394
Query: 110 ---DPYLQ-----ETRFEGPLPPPPP---AAAAPPPPAPA 138
P L ++ GP PP PP +A APPPP P+
Sbjct: 395 LPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPS 434
Score = 64.7 bits (156), Expect = 1e-10
Identities = 64/224 (28%), Positives = 84/224 (37%), Gaps = 34/224 (15%)
Query: 1 MSSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
+ S+ +P VP T P ++P PP P PS GTA LG
Sbjct: 176 VGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTA----LG 231
Query: 61 AGGLASSAATAQRGPSSSATLPRPPHHA------PPGPAAG----------APPPGCATL 104
G + S ++ S+ LP P A PP P G PPP
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNK 291
Query: 105 PRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTA--QAPGFVVPTHAGTVGTLPLGG 162
P +P P + P PPPPP+ PPP P+ + + P + + T PL
Sbjct: 292 PPVPSTP-RPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL-- 348
Query: 163 YVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPP 206
+PG L P + P PV P PG +G LPPPP
Sbjct: 349 -PSPGRSGPLPPPPSERPPPPVRDP-----PGRSG---PLPPPP 383
Score = 46.2 bits (108), Expect = 4e-05
Identities = 61/228 (26%), Positives = 78/228 (34%), Gaps = 38/228 (16%)
Query: 2 SSEKSGLPDSVPHTSPPPYNAPQPPA-----EPPAPPPQAA--PSSHHHHHHHYHQSGTA 54
S +S L S P ++ PP P P+ +PP PPP PS H A
Sbjct: 234 SIRQSPLSSSSPFSNRPPL--PPTPSRALDDKPPPPPPPVGNRPSIHRE----------A 281
Query: 55 TLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQ 114
P +T + SS A P PP P P G PR+P +
Sbjct: 282 VPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQ----R 337
Query: 115 ETRFEGPLPP-PPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVA-PGYPLQL 172
PP P P + P PP P++ P V G G LP V+ G +
Sbjct: 338 NLSLSSSTPPLPSPGRSGPLPPPPSERPPPP---VRDPPGRSGPLPPPPPVSRNGSTSRA 394
Query: 173 QPCTAYVPVYP-VGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRP 219
P T +P V +P +G P P PP P P P
Sbjct: 395 LPATPQLPSRSGVDSPRSGPRP---------PLPPDRPSAGAPPPPPP 433
Score = 36.6 bits (83), Expect = 0.029
Identities = 37/132 (28%), Positives = 48/132 (36%), Gaps = 48/132 (36%)
Query: 17 PPPYNAPQPPAEPP----APPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQ 72
PPP P PP P P P P S + S + LP A+ ++
Sbjct: 359 PPPSERPPPPVRDPPGRSGPLPPPPPVSRNG-------STSRALP-------ATPQLPSR 404
Query: 73 RGPSSSATLPRPPHHAPPGPAAGAPPPG---------------------------CATLP 105
G S + PRPP P P+AGAPPP + LP
Sbjct: 405 SGVDSPRSGPRPPL-PPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLP 463
Query: 106 RMPPDPYLQETR 117
PP+PY+Q T+
Sbjct: 464 --PPEPYVQTTK 473
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 65.1 bits (157), Expect = 8e-11
Identities = 52/160 (32%), Positives = 64/160 (40%), Gaps = 24/160 (15%)
Query: 2 SSEKSGLPDSVPHTSPPPY-NAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
S + +P P + PP + P+P A APPP PS SG PRL
Sbjct: 276 SIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLP 335
Query: 61 AGGLASSAATAQR-GPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPP---------- 109
L+ S++T P S LP PP PP P PP LP PP
Sbjct: 336 QRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRD-PPGRSGPLPPPPPVSRNGSTSRA 394
Query: 110 ---DPYLQ-----ETRFEGPLPPPPP---AAAAPPPPAPA 138
P L ++ GP PP PP +A APPPP P+
Sbjct: 395 LPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPS 434
Score = 64.7 bits (156), Expect = 1e-10
Identities = 64/224 (28%), Positives = 84/224 (37%), Gaps = 34/224 (15%)
Query: 1 MSSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
+ S+ +P VP T P ++P PP P PS GTA LG
Sbjct: 176 VGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTA----LG 231
Query: 61 AGGLASSAATAQRGPSSSATLPRPPHHA------PPGPAAG----------APPPGCATL 104
G + S ++ S+ LP P A PP P G PPP
Sbjct: 232 GGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNK 291
Query: 105 PRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTA--QAPGFVVPTHAGTVGTLPLGG 162
P +P P + P PPPPP+ PPP P+ + + P + + T PL
Sbjct: 292 PPVPSTP-RPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPL-- 348
Query: 163 YVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPP 206
+PG L P + P PV P PG +G LPPPP
Sbjct: 349 -PSPGRSGPLPPPPSERPPPPVRDP-----PGRSG---PLPPPP 383
Score = 46.2 bits (108), Expect = 4e-05
Identities = 61/228 (26%), Positives = 78/228 (34%), Gaps = 38/228 (16%)
Query: 2 SSEKSGLPDSVPHTSPPPYNAPQPPA-----EPPAPPPQAA--PSSHHHHHHHYHQSGTA 54
S +S L S P ++ PP P P+ +PP PPP PS H A
Sbjct: 234 SIRQSPLSSSSPFSNRPPL--PPTPSRALDDKPPPPPPPVGNRPSIHRE----------A 281
Query: 55 TLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQ 114
P +T + SS A P PP P P G PR+P +
Sbjct: 282 VPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQ----R 337
Query: 115 ETRFEGPLPP-PPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVA-PGYPLQL 172
PP P P + P PP P++ P V G G LP V+ G +
Sbjct: 338 NLSLSSSTPPLPSPGRSGPLPPPPSERPPPP---VRDPPGRSGPLPPPPPVSRNGSTSRA 394
Query: 173 QPCTAYVPVYP-VGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRP 219
P T +P V +P +G P P PP P P P
Sbjct: 395 LPATPQLPSRSGVDSPRSGPRP---------PLPPDRPSAGAPPPPPP 433
Score = 36.6 bits (83), Expect = 0.029
Identities = 37/132 (28%), Positives = 48/132 (36%), Gaps = 48/132 (36%)
Query: 17 PPPYNAPQPPAEPP----APPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQ 72
PPP P PP P P P P S + S + LP A+ ++
Sbjct: 359 PPPSERPPPPVRDPPGRSGPLPPPPPVSRNG-------STSRALP-------ATPQLPSR 404
Query: 73 RGPSSSATLPRPPHHAPPGPAAGAPPPG---------------------------CATLP 105
G S + PRPP P P+AGAPPP + LP
Sbjct: 405 SGVDSPRSGPRPPL-PPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLP 463
Query: 106 RMPPDPYLQETR 117
PP+PY+Q T+
Sbjct: 464 --PPEPYVQTTK 473
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 64.7 bits (156), Expect = 1e-10
Identities = 47/130 (36%), Positives = 52/130 (40%), Gaps = 27/130 (20%)
Query: 9 PDSVPHTSPP---PYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLA 65
P + P SPP P AP PPA PP PPP P +G G
Sbjct: 301 PPAPPLGSPPGPKPGFAP-PPAPPPPPPPMIGIPPPP--------------PPVGFGSPG 345
Query: 66 SSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPP 125
+ PS + P P APP P PPP A P +PP P Q T P PPP
Sbjct: 346 TPPP-----PSPPSFPPHPDFAAPPPP----PPPPAADYPTLPPPPLSQPTGGAPPPPPP 396
Query: 126 PPAAAAPPPP 135
PP PPPP
Sbjct: 397 PPPPGPPPPP 406
Score = 60.5 bits (145), Expect = 2e-09
Identities = 65/214 (30%), Positives = 77/214 (35%), Gaps = 65/214 (30%)
Query: 17 PPPYN----APQPP-AEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATA 71
PPP + +P P +E PPP P+ + + SG A G SS +
Sbjct: 248 PPPQSDSASSPSPSFSEDNLPPP---PAEFSYPVDNQRGSGLA-------GPKRSSVVSP 297
Query: 72 QRGPSSSATLPRPPHHAPPGPAAG-APPPGCATLPRMPPDPYLQETRFEGPLPPPPPAA- 129
P P PP +PPGP G APPP P PP P + G PPPPP
Sbjct: 298 SHPP------PAPPLGSPPGPKPGFAPPPA----PPPPPPPMI------GIPPPPPPVGF 341
Query: 130 ---AAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGT 186
PPPP+P P F P P A YP +P P+
Sbjct: 342 GSPGTPPPPSPPSFPPHPDFAAPP--------PPPPPPAADYPT--------LPPPPLSQ 385
Query: 187 PYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
P G P PPPP PG P PP
Sbjct: 386 PTGGAPPP--------PPPPPPPG-----PPPPP 406
Score = 44.7 bits (104), Expect = 1e-04
Identities = 40/138 (28%), Positives = 45/138 (32%), Gaps = 32/138 (23%)
Query: 9 PDSVPHTSPPPYNAPQPP-----AEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGG 63
P + P PP P PP P PPP + PS H
Sbjct: 319 PPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPH-------------------- 358
Query: 64 LASSAATAQRGPSSSA---TLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEG 120
AA P +A TLP PP P G GAPPP P PP P +
Sbjct: 359 -PDFAAPPPPPPPPAADYPTLPPPPLSQPTG---GAPPPPPPPPPPGPPPPPFTGADGQP 414
Query: 121 PLPPPPPAAAAPPPPAPA 138
+PPP P PA
Sbjct: 415 AIPPPLSDTTKPKSSLPA 432
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 64.7 bits (156), Expect = 1e-10
Identities = 66/214 (30%), Positives = 77/214 (35%), Gaps = 41/214 (19%)
Query: 2 SSEKSGLPDSVPHTS--PPPYNAPQPPAEPPAPP--PQAAPSSHHHHHHHYHQSGTATLP 57
SS++ P SVP + PP P P PPAPP P P+ G P
Sbjct: 387 SSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPT------------GLPPGP 434
Query: 58 RLGAGG-LASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQET 116
GA L RGP P PP PPGP G PPPG +PP P
Sbjct: 435 PPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPG-PPPG------LPPGP----- 482
Query: 117 RFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCT 176
PP P PPP P PG + P +G P G + P PL P
Sbjct: 483 ------PPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPG--LFPPAPLP-NPGV 533
Query: 177 AYVPVYPVGTPYAGGTPGGT---GVTSTLPPPPQ 207
P + P A T T T+T+ PQ
Sbjct: 534 LSAPPNLIQRPKADDTSAATIEKKATATISAKPQ 567
Score = 50.1 bits (118), Expect = 2e-06
Identities = 60/196 (30%), Positives = 69/196 (35%), Gaps = 63/196 (32%)
Query: 28 EPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHH 87
E + +A S H H GT+T A++ Q+ P S PP
Sbjct: 358 EDDSDDSEAEKQSQKQHKEESHSDGTST------------ASSQQQAPPQSV----PPSQ 401
Query: 88 APPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFV 147
P G PP G PP P PL PP P PP P P AP F+
Sbjct: 402 IQAPPMPGPPPLG------PPPAP---------PLRPPGPPTGLPPGPPPG----APPFL 442
Query: 148 VPTHA-GTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPP-- 204
P G G LP + PG P P P G P G PG LPP
Sbjct: 443 RPPGMPGLRGPLPR--LLPPGPP----------PGRPPGPP-PGPPPG-------LPPGP 482
Query: 205 PPQGPGLALLEPRRPP 220
PP+GP PR PP
Sbjct: 483 PPRGP-----PPRLPP 493
Score = 34.7 bits (78), Expect = 0.11
Identities = 37/149 (24%), Positives = 42/149 (28%), Gaps = 56/149 (37%)
Query: 1 MSSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
M + LP +P PP PP PP PP P
Sbjct: 447 MPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPP---------------------- 484
Query: 61 AGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPP-PGCATLPRMPPDPYLQETRFE 119
RGP PP PP P PP PG P +P
Sbjct: 485 ------------RGP--------PPRLPPPAPPGIPPPRPGMMRPPLVP----------- 513
Query: 120 GPLPPPPPAAAAPPP-PAPAQTAQAPGFV 147
PL P PP P P P P + P +
Sbjct: 514 -PLGPAPPGLFPPAPLPNPGVLSAPPNLI 541
Score = 29.6 bits (65), Expect = 3.5
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 17/79 (21%)
Query: 56 LPRLGAGGLASSAATAQRGPSSSAT---------LPR-PPHHAPPGPAAGAPPPGCATLP 105
+P GA + T+ GP + A +PR PP PPGP G PPP +
Sbjct: 156 IPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKPPGPPPGPPPPQVVQM- 214
Query: 106 RMPPDPYLQETRFEGPLPP 124
Y ++ F LPP
Sbjct: 215 ------YGRKVGFALDLPP 227
>gi|169178462 PREDICTED: similar to NG5 protein [Homo sapiens]
Length = 93
Score = 63.9 bits (154), Expect = 2e-10
Identities = 37/86 (43%), Positives = 48/86 (55%)
Query: 209 PGLALLEPRRPPHDYMPIAVLTTICCFWPTGIIAIFKAVQVRTALARGDMVSAEIASREA 268
PG A +E R P DYM +VL T+ C TG+IAI + + R AL RGD+ AE ASR+A
Sbjct: 5 PGPATVEHRPLPKDYMMESVLVTLFCCLLTGLIAIVYSHEARAALGRGDLAQAEEASRKA 64
Query: 269 RNFSFISLAVGIAAMVLCTILTVVII 294
R+ SL G+ I VV +
Sbjct: 65 RSLVLFSLLFGVFVSTSWVIYVVVAL 90
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 63.9 bits (154), Expect = 2e-10
Identities = 72/237 (30%), Positives = 85/237 (35%), Gaps = 39/237 (16%)
Query: 7 GLPDSVPH----TSPPPYNAPQPPAEPPAPP-PQAAPSSHHHHHHHYHQSGTATLPRLGA 61
G P + P ++PP P P P A P P+ AP++ ATLP
Sbjct: 1021 GSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTP-----------AATLPSPKG 1069
Query: 62 GGLASSAATAQRGPSSSATLPR------PPHHAPPGPAAGAPPP--GCATLPRM--PPDP 111
G S A P+++ P+ P AP PAA P P G AT P P P
Sbjct: 1070 GPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTP 1129
Query: 112 YLQETRFEGPLPPPPPAAA-----APPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAP 166
+G L PPP A A PP A P PT P GG P
Sbjct: 1130 AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP 1189
Query: 167 GYPLQLQPCTAYVPVYPVG---TPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
P A P P G TP G P T PP P+G GLA P+ P
Sbjct: 1190 S-PKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT---PPSPKG-GLATPSPKGAP 1241
Score = 63.2 bits (152), Expect = 3e-10
Identities = 75/243 (30%), Positives = 85/243 (34%), Gaps = 60/243 (24%)
Query: 3 SEKSGLPDSVPHTSPPPYNAPQPPAEPP--------APPPQAAPSSHHHHHHHYHQSGTA 54
S K GL +PPP AP PA P PPP+ AP++ A
Sbjct: 1135 SPKGGL------ATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTT------------PA 1176
Query: 55 TLPRLGAGGLASSA------ATAQRGPSSSATLPRP-PHHAPPGPAAGAPPP-------- 99
P GGLA+ + A PS L P P AP PAA P P
Sbjct: 1177 ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPS 1236
Query: 100 --GCATLPRM-PPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVG 156
G T P PP P GP PPP A P PPA + G P H G
Sbjct: 1237 PKGAPTTPAATPPSPK------GGPATPPPKGA--PTPPAATPPSLKGGLATPPHKGA-- 1286
Query: 157 TLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEP 216
P V P P + P T+ P TP A P G T PPP P + P
Sbjct: 1287 --PNPAVVTPPSP-KGGPATS--PPKGAPTPPAATPPSPKGSPGT-PPPKGAPTPPAVTP 1340
Query: 217 RRP 219
P
Sbjct: 1341 PSP 1343
Score = 62.0 bits (149), Expect = 6e-10
Identities = 64/220 (29%), Positives = 82/220 (37%), Gaps = 28/220 (12%)
Query: 9 PDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSA 68
P P +P P A PPA P P P+ +P++ LP+ A++
Sbjct: 1019 PKGSPAATPFPKGASTPPAATP-PSPKGSPAA-------------TPLPKGAPTTPAATL 1064
Query: 69 ATAQRGPSSSAT--LPRPPHHAPPGPAAG--APPPGCATLPRMPPDPYLQETRFEGPLPP 124
+ + GP++ + P PP PP P G P P A +P P + P
Sbjct: 1065 PSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKG 1124
Query: 125 PPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCT-AYVPVYP 183
P AA PP A P PT P GG P P + P T A P P
Sbjct: 1125 APTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATP--PPKGAPTTPAATPPSP 1182
Query: 184 VG---TPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
G TP G P T PP P+G GLA P+ P
Sbjct: 1183 KGGLATPSPKGAPTTPAAT---PPSPKG-GLATPSPKGAP 1218
Score = 61.2 bits (147), Expect = 1e-09
Identities = 71/232 (30%), Positives = 82/232 (35%), Gaps = 29/232 (12%)
Query: 9 PDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGA------G 62
P +P SP P AP PPA P P P+ P++ + T P+ G G
Sbjct: 927 PKGIP-ASPSPKGAPTPPAATP-PSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKG 984
Query: 63 GLASSAATAQRGPSSSAT-----LPRPPHHAPPGPA---AGAPPPGCATLPRMPPDPYLQ 114
AAT AT P PP PP P A P P A+ P P +
Sbjct: 985 APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044
Query: 115 ETRFEGPLP---PPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQ 171
+ PLP P PAA P P T G PT P GG P P
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATPSLKG--APTPPAATPPSPKGGPATPS-PKG 1101
Query: 172 LQPCTAYVPVYPVG---TPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
A P P G TP G P T PP P+G GLA P+ P
Sbjct: 1102 APMPPAATPPSPKGGLATPPHKGAPTTPAAT---PPSPKG-GLATPPPKGAP 1149
Score = 59.3 bits (142), Expect = 4e-09
Identities = 63/227 (27%), Positives = 78/227 (34%), Gaps = 26/227 (11%)
Query: 16 SPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGP 75
+PPP AP PPA A PP H T P G S A P
Sbjct: 1257 TPPPKGAPTPPA---ATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPP 1313
Query: 76 SSSATLPR------PPHHAPPGPAAGAP-PPGCATLPRMPPDPYLQETRFEGPLPPPPPA 128
+++ P+ PP AP PA P P G TLP P T P PPA
Sbjct: 1314 AATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPA 1373
Query: 129 AAAPPPPAPAQTAQAP--GFVVPTHAG---TVGTLPLGGYVAPGYPLQLQPCT------- 176
A PA T +P G +P+ G + +PL AP P+ +
Sbjct: 1374 ATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDL 1433
Query: 177 ---AYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
A PV P A P G T + P P + P+ PP
Sbjct: 1434 TPPAVTPVSLKKAP-ATSAPKGGPATPSSKGDPTLPAVTPPSPKEPP 1479
Score = 56.6 bits (135), Expect = 3e-08
Identities = 61/213 (28%), Positives = 79/213 (37%), Gaps = 19/213 (8%)
Query: 15 TSPPPYNAPQPPAEPPAPP------PQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSA 68
T P P AP P A P P P+ P+ + + + G AT A L+ ++
Sbjct: 857 TPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLP-FPKEGPATPAPKQAPALSMTS 915
Query: 69 ATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPA 128
++ ++ ++ A P A P P GAP P AT PP P P PPA
Sbjct: 916 SSPKKARATPAPKGIP---ASPSPK-GAPTPPAAT----PPSPKGGPATPSPKWAPTPPA 967
Query: 129 AAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPY 188
A P P T G PT P GG P P A P P G+P
Sbjct: 968 ATPPSPKGGPATPSPKG--APTPPAATPPSPKGGPATPS-PKGAPTPPAVTPPSPKGSPA 1024
Query: 189 AGGTPGGTGV-TSTLPPPPQGPGLALLEPRRPP 220
A P G + PP P+G A P+ P
Sbjct: 1025 ATPFPKGASTPPAATPPSPKGSPAATPLPKGAP 1057
Score = 52.4 bits (124), Expect = 5e-07
Identities = 59/232 (25%), Positives = 84/232 (36%), Gaps = 39/232 (16%)
Query: 11 SVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAAT 70
++P T+P P P+ P P AA S H+ G A P G A +
Sbjct: 1348 TLPATTPSSKGGPTTPSSKEGPTPPAATPS--------HKGGPAMTPPSPKRGPA--IPS 1397
Query: 71 AQRGPSSSATLPRPPHHAPPGP----AAGAPPPGCATLPRMPP--------------DPY 112
+ P+S A +P P AP P A P G T P + P P
Sbjct: 1398 PKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPA 1457
Query: 113 LQETRFEGPLPP-PPPAAAAPPPPAPAQTAQAPGFVVPTHAGT-VGTLPLGGYVAPGYPL 170
++ + LP PP+ PP P T+ +P T A TLP V P P
Sbjct: 1458 TPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPA---VIPSSPK 1514
Query: 171 QL--QPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
++ P + P+ P T + TP L P P + + P++ P
Sbjct: 1515 EVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIP----PAMTVPSPKKTP 1562
Score = 44.7 bits (104), Expect = 1e-04
Identities = 61/240 (25%), Positives = 80/240 (33%), Gaps = 49/240 (20%)
Query: 15 TSPPPYNAPQPPA--------EPPAPPPQAAPSSHHHHHHHYHQSGT----------ATL 56
TSP P AP PPA P P P+ P+S S T AT+
Sbjct: 1606 TSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATV 1665
Query: 57 PRLGAGGLASSAATAQR------GPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPD 110
P+ G A TA + P S+ + P P + AT P + PD
Sbjct: 1666 PQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSS------ATSPPICPD 1719
Query: 111 PYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQA-------PGFVVPTHAGTVGTLPLGGY 163
P + +GPL PA P ++TA+ G + P + L +
Sbjct: 1720 PSAKNGS-KGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAF 1778
Query: 164 VAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPP----PQGPGLALLEPRRP 219
P + P PV P A TLPP P PGL L P +P
Sbjct: 1779 -EKVLPKPESASVSAAPSPPVSLPLA------PSPVPTLPPKQQFLPSSPGLVLESPSKP 1831
Score = 44.3 bits (103), Expect = 1e-04
Identities = 49/170 (28%), Positives = 67/170 (39%), Gaps = 15/170 (8%)
Query: 50 QSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPP-PGCATLPRMP 108
Q+ TA LP A L+ +AA Q GP+ P P A A P P +T+ P
Sbjct: 20 QAETAVLPMSSA--LSVTAALGQPGPTLPPPCSPAPQQCPLSAANQASPFPSPSTIASTP 77
Query: 109 PD-PYLQETRFEGPLPPPPPAAAAP--------PPPAPAQTAQAPGFVVPTHAGTVGTLP 159
+ P+ Q + G P A AP PP +PA A A + PT GT +
Sbjct: 78 LEVPFPQSS--SGTALPLGTAPEAPTFLPNLIGPPISPAALALASPMIAPTLKGTPSSSA 135
Query: 160 LGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGP 209
VA P +Q +A+ P P G+ +T + P P P
Sbjct: 136 PLALVALA-PHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEP 184
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/179 (27%), Positives = 62/179 (34%), Gaps = 21/179 (11%)
Query: 61 AGGLASSAATAQRGPSSSATLPRPPHHAPPG---PAAGAP--PPGCATLPRMPPDPYLQE 115
A L ++ + Q S AT P +P G P+A P P G P+ P P +
Sbjct: 833 ASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVN 892
Query: 116 TRF--EGPLPPPPPAAAA----PPPPAPAQTAQAPGFV--------VPTHAGTVGTLPLG 161
F EGP P P A A P A+ AP + PT P G
Sbjct: 893 LPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKG 952
Query: 162 GYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
G P P A P P G P G + PP P+G G A P+ P
Sbjct: 953 GPATPS-PKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKG-GPATPSPKGAP 1009
Score = 40.8 bits (94), Expect = 0.002
Identities = 32/128 (25%), Positives = 39/128 (30%), Gaps = 26/128 (20%)
Query: 17 PPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPS 76
PP P P P P P+ AP AT A + + +G
Sbjct: 1550 PPAMTVPSPKKTPAIPTPKEAP---------------ATPSSKEASSPPAVTPSTYKGAP 1594
Query: 77 SSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPA 136
S L PP P P PP PP P +GP P P PP
Sbjct: 1595 SPKELLIPPAVTSPSPKEAPTPPAVT-----PPSPE------KGPATPAPKGTPTSPPVT 1643
Query: 137 PAQTAQAP 144
P+ +P
Sbjct: 1644 PSSLKDSP 1651
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 63.9 bits (154), Expect = 2e-10
Identities = 67/220 (30%), Positives = 85/220 (38%), Gaps = 45/220 (20%)
Query: 3 SEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAG 62
S++ L D++P SP +A P PPQ P S+ ++ S + LP
Sbjct: 2 SDEFSLADALPEHSPAKTSAVSNTK--PGQPPQGWPGSNPWNNPSAPSSVPSGLPP---- 55
Query: 63 GLASSAATAQRGPSSSATLPR-PPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGP 121
+++ +T GP+ + P PP PPGP A PP G + P P PY T
Sbjct: 56 --SATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPP--PGGPYPAPT----- 106
Query: 122 LPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTL-PLG----GYVAPG----YPLQL 172
+P P P P P P P + PT G L P G G APG YP
Sbjct: 107 VPGPGPTGPYPTPNMPFPELPRP-YGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPN 165
Query: 173 QPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLA 212
P YP PY PPPPQ PG A
Sbjct: 166 MP-------YPSPGPYPA------------PPPPQAPGAA 186
Score = 63.5 bits (153), Expect = 2e-10
Identities = 64/204 (31%), Positives = 75/204 (36%), Gaps = 21/204 (10%)
Query: 2 SSEKSGLPDSVPHTSPPPYNAPQP--PAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRL 59
SS SGLP S ++ P AP P+ PP PP P+ + SG + P
Sbjct: 47 SSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAP-------FPPSGPSCPPPG 99
Query: 60 GAGGLASSAATAQRGPSSSATLPRP----PHHAPPGPAAGAP--PPGCATLPRMPPDPYL 113
G + GP + +P P P+ AP PAA P P G + P
Sbjct: 100 GPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGG 159
Query: 114 QETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHA---GTVGTLPLGGYVAPG-YP 169
Q P P P P A PPP AP P VP A P G Y PG YP
Sbjct: 160 QYPTPNMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTPGLYP 219
Query: 170 LQLQPCTAYVPVYPVGTPYAGGTP 193
P VP P G P G P
Sbjct: 220 TPSNP--FQVPSGPSGAPPMPGGP 241
Score = 37.4 bits (85), Expect = 0.017
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Query: 11 SVPHTSPPPYNAPQPPAEPPAPPP---QAAPSSHHHHHHHYHQSGTATLPRLGAGGLASS 67
++P+ SP PY AP PP P A PP P Y + T + P G S+
Sbjct: 165 NMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAPY-PAPTGSYPTPGLYPTPSN 223
Query: 68 AATAQRGPSSSATLPRPPH 86
GPS + +P PH
Sbjct: 224 PFQVPSGPSGAPPMPGGPH 242
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [Homo
sapiens]
Length = 1636
Score = 63.5 bits (153), Expect = 2e-10
Identities = 64/236 (27%), Positives = 83/236 (35%), Gaps = 45/236 (19%)
Query: 14 HTSPPPYNAPQPPAEP-PAPPPQAAPSSHHH---------HHHHYHQSGTATLPRLGAGG 63
HT+P P P PP P PPPQ P+ + + HH+ A P G
Sbjct: 894 HTAPRPNPTPAPPPPCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIG- 952
Query: 64 LASSAATAQRGPSSSATLPRPPHHAPPGPA-AGAPPPGCATLPRMPPDPYLQETRFEGPL 122
P+P H P P+ A P P LP P+L + G L
Sbjct: 953 ------------------PQPQPHPQPHPSQAFGPQPPQQPLPLQ--HPHLFPPQAPGLL 992
Query: 123 PPPPPAAAAP------PPPAPAQTAQAPGFV---VPTHAGTVGTLPLGGYVAPGYPLQLQ 173
PP P AP PP P T PG +P H+G + G P PL
Sbjct: 993 PPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGPPQPPHPPLAYG 1052
Query: 174 PCTAYVPVYPVGTPYAGGTPGGTGVTS----TLPPPPQGPGLALLEPRRPPHDYMP 225
P + P+ P P P G ++ +P P PG + PR P + P
Sbjct: 1053 PAPSTRPMGPQAAPLTIRGPSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPP 1108
Score = 48.1 bits (113), Expect = 9e-06
Identities = 63/223 (28%), Positives = 74/223 (33%), Gaps = 54/223 (24%)
Query: 22 APQPPAEPPAPPPQAAPSSHHHHH-----HHYHQSGTATLPRLGAG------GLASSAAT 70
AP P A P AP P P+ + Q G + P +G G GL S+
Sbjct: 807 APGPHAMPVAPGPALYPAPAYTPELGLVPRSSPQHGVVSSPYVGVGPAPPVAGLPSAPPP 866
Query: 71 AQRGPS------------SSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRF 118
GP S P P H AP APPP C +P PP
Sbjct: 867 QFSGPELAMAVRPATTTVDSIQAPIPSHTAPRPNPTPAPPPPCFPVP--PPQ-------- 916
Query: 119 EGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLP----------LGGYVAPGY 168
PLP P A P PAQ + G A +G P G P
Sbjct: 917 --PLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQ 974
Query: 169 PLQLQPCTAYVP----VYPVGTPYA-GGTPGGTGVTSTLPPPP 206
PL LQ + P + P +PY PG G PPPP
Sbjct: 975 PLPLQHPHLFPPQAPGLLPPQSPYPYAPQPGVLG----QPPPP 1013
Score = 46.6 bits (109), Expect = 3e-05
Identities = 46/157 (29%), Positives = 50/157 (31%), Gaps = 29/157 (18%)
Query: 6 SGLPDS--VPHTSPPPYNAPQP---PAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLG 60
SG+P P P P PQP A P PP Q P H H P
Sbjct: 940 SGIPAGFPAPRIGPQPQPHPQPHPSQAFGPQPPQQPLPLQHPH-----------LFPPQA 988
Query: 61 AGGLASSAATAQRGPSSSATLPRPPHHAP--PGPAAGAPPPGCATLPRMPPDPYLQETRF 118
G L + P PP H PGPA P LP P P
Sbjct: 989 PGLLPPQSPYPYAPQPGVLGQPPPPLHTQLYPGPAQDPLPAHSGALPFPSPGP------- 1041
Query: 119 EGPLPPPPPAAAAPPPPAPAQTAQAPGFVV--PTHAG 153
P PP PP A P P QA + P+ AG
Sbjct: 1042 --PQPPHPPLAYGPAPSTRPMGPQAAPLTIRGPSSAG 1076
Score = 41.2 bits (95), Expect = 0.001
Identities = 44/148 (29%), Positives = 51/148 (34%), Gaps = 30/148 (20%)
Query: 82 PRPPHHAPPGPAAGAPPP----GCATLPRMPPDPYLQETR-----FEGPLPPP----PPA 128
P PP AG P G AT PP P+ T GPLPP P
Sbjct: 742 PEELRSLPPDMVAGPRLPDTFLGSATPLHFPPSPFPSSTGPGPHYLSGPLPPGTYSGPTQ 801
Query: 129 AAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPV-GTP 187
P P P APG + Y AP Y +L P + V +P
Sbjct: 802 LIQPRAPGPHAMPVAPGPAL--------------YPAPAYTPELGLVPRSSPQHGVVSSP 847
Query: 188 YA--GGTPGGTGVTSTLPPPPQGPGLAL 213
Y G P G+ S PP GP LA+
Sbjct: 848 YVGVGPAPPVAGLPSAPPPQFSGPELAM 875
Score = 40.8 bits (94), Expect = 0.002
Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 42/125 (33%)
Query: 10 DSVP-HTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSA 68
D +P H+ P+ +P PP +PP PP P+ +T P +G +A
Sbjct: 1025 DPLPAHSGALPFPSPGPP-QPPHPPLAYGPAP-------------STRP-MGP----QAA 1065
Query: 69 ATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPA 128
RGPSS+ PH P + AP PG GP+PP PPA
Sbjct: 1066 PLTIRGPSSAGQSTPSPHLVP----SPAPSPG------------------PGPVPPRPPA 1103
Query: 129 AAAPP 133
A PP
Sbjct: 1104 AEPPP 1108
Score = 34.7 bits (78), Expect = 0.11
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 9/44 (20%)
Query: 6 SGLPDS--VPHTSPPPYN-----APQPPAEPPAP--PPQAAPSS 40
+ LP+S +P +SPPP + APQP EPP P P PSS
Sbjct: 1532 ASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPSSGPPSS 1575
Score = 31.6 bits (70), Expect = 0.92
Identities = 21/52 (40%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Query: 90 PGPAAGAPPPGC--ATLPRMPPDPYLQETRFEGPLPPPPPAAAAPP-PPAPA 138
PGPA PPG A+LP P P PLP P PP P AP+
Sbjct: 1521 PGPAE---PPGLPPASLPESTPIPSSSPPPLSSPLPEAPQPKEEPPVPEAPS 1569
Score = 30.4 bits (67), Expect = 2.0
Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 21/95 (22%)
Query: 26 PAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPP 85
PAEPP PP + P S + SS+ P A P+
Sbjct: 1523 PAEPPGLPPASLPES---------------------TPIPSSSPPPLSSPLPEAPQPKEE 1561
Query: 86 HHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEG 120
P P++G P L + P+ + ++ G
Sbjct: 1562 PPVPEAPSSGPPSSSLELLASLTPEAFSLDSSLRG 1596
Score = 30.0 bits (66), Expect = 2.7
Identities = 26/104 (25%), Positives = 41/104 (39%), Gaps = 4/104 (3%)
Query: 125 PPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPV 184
PPP AP P P + ++ + +LP P P + P++
Sbjct: 716 PPPRPTAPKPLLPRRE-ESEAVEAGDPPEELRSLPPDMVAGPRLPDTF--LGSATPLHFP 772
Query: 185 GTPYAGGT-PGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMPIA 227
+P+ T PG ++ LPP L++PR P MP+A
Sbjct: 773 PSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPGPHAMPVA 816
Score = 29.6 bits (65), Expect = 3.5
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 89 PPG----PAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAP 144
PPG P A P P A P +PP + T PPP ++P P AP + P
Sbjct: 1509 PPGGLESPVASLPGP--AEPPGLPPASLPESTPIPSSSPPP---LSSPLPEAPQPKEEPP 1563
Query: 145 GFVVPTHAGTVGTLPLGGYVAP 166
P+ +L L + P
Sbjct: 1564 VPEAPSSGPPSSSLELLASLTP 1585
Score = 28.9 bits (63), Expect = 6.0
Identities = 24/87 (27%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Query: 9 PDSVPHTSPPPYNAPQPPAEPPAPPP----QAAPSSHHHHHHHYHQSGTATLPRLGAGGL 64
P VP +P P P PP P A PP + A ++ Q G P G L
Sbjct: 1082 PHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGTQSPGGGQPLL 1141
Query: 65 ASSAATAQRG--PSSSATLPRPPHHAP 89
+ A G P + + R P+ P
Sbjct: 1142 QPTKVDAAEGRRPQALRLIERDPYEHP 1168
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 62.8 bits (151), Expect = 4e-10
Identities = 73/245 (29%), Positives = 87/245 (35%), Gaps = 76/245 (31%)
Query: 1 MSSEKSGLPDSVPHTSP---------------PPYNAP-----QPPAEPPAPPPQAAPSS 40
+S+ +P SVP +P PP AP PP PP PPP P
Sbjct: 556 LSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGG 615
Query: 41 HHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPP-- 98
S +LP GG A S G AT+P PP P G +P
Sbjct: 616 -------VCISSPPSLP----GGTAISPPPPLSG---DATIP-PPPPLPEGVGIPSPSSL 660
Query: 99 PGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTL 158
PG +P PP P R P PP P +A PPPP P +P AG +
Sbjct: 661 PGGTAIP--PPPPLPGSARIPPPPPPLPGSAGIPPPPPP----------LPGEAG----M 704
Query: 159 PLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRR 218
P PG P G P PGG G+ PPPP G G+ P
Sbjct: 705 PPPPPPLPGGP---------------GIPPPPPFPGGPGI----PPPPPGMGM----PPP 741
Query: 219 PPHDY 223
PP +
Sbjct: 742 PPFGF 746
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 62.8 bits (151), Expect = 4e-10
Identities = 73/245 (29%), Positives = 87/245 (35%), Gaps = 76/245 (31%)
Query: 1 MSSEKSGLPDSVPHTSP---------------PPYNAP-----QPPAEPPAPPPQAAPSS 40
+S+ +P SVP +P PP AP PP PP PPP P
Sbjct: 565 LSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGG 624
Query: 41 HHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPP-- 98
S +LP GG A S G AT+P PP P G +P
Sbjct: 625 -------VCISSPPSLP----GGTAISPPPPLSG---DATIP-PPPPLPEGVGIPSPSSL 669
Query: 99 PGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTL 158
PG +P PP P R P PP P +A PPPP P +P AG +
Sbjct: 670 PGGTAIP--PPPPLPGSARIPPPPPPLPGSAGIPPPPPP----------LPGEAG----M 713
Query: 159 PLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRR 218
P PG P G P PGG G+ PPPP G G+ P
Sbjct: 714 PPPPPPLPGGP---------------GIPPPPPFPGGPGI----PPPPPGMGM----PPP 750
Query: 219 PPHDY 223
PP +
Sbjct: 751 PPFGF 755
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 62.8 bits (151), Expect = 4e-10
Identities = 48/142 (33%), Positives = 52/142 (36%), Gaps = 27/142 (19%)
Query: 6 SGLPDSVPHTSPPPY---NAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAG 62
+G P +PH PPPY + PP PP P P S +P
Sbjct: 985 AGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGPGS--------------MMPGQHMP 1030
Query: 63 GLASSAATAQRGPSSSATLPRPPHHAP-PGPAAGAPPPGCATLPRMPPDPYLQETRFEGP 121
G A PS S P PP P PG G P A PP P Q
Sbjct: 1031 GRMIPTVAANIHPSGSG--PTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQQP------ 1082
Query: 122 LPPPPPAAAAPPPPAPAQTAQA 143
PPPPPA PPPPAP A A
Sbjct: 1083 -PPPPPADGVPPPPAPGPPASA 1103
Score = 34.7 bits (78), Expect = 0.11
Identities = 44/147 (29%), Positives = 50/147 (34%), Gaps = 33/147 (22%)
Query: 82 PRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAP-PPPAPAQT 140
P+ H GP G P G A P M P PPP P PPP P Q
Sbjct: 967 PQQAHQHSGGP--GLAPLGAAGHPGMMPHQQ----------PPPYPLMHHQMPPPHPPQP 1014
Query: 141 AQ------------APGFVVPTHAGTV-----GTLPLGGYVAPGYPLQLQ-PCTAYVPVY 182
Q PG ++PT A + G P G PG L + P TA +Y
Sbjct: 1015 GQIPGPGSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMY 1074
Query: 183 PVGTPYAGGTPGGTGVTSTLPPPPQGP 209
P P P PPP GP
Sbjct: 1075 P--PPPQQQPPPPPPADGVPPPPAPGP 1099
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 62.0 bits (149), Expect = 6e-10
Identities = 61/215 (28%), Positives = 73/215 (33%), Gaps = 44/215 (20%)
Query: 15 TSPPPYN--APQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQ 72
T+PP N AP PP PP PPP P L + + +
Sbjct: 164 TAPPRPNVPAPPPPTPPPPPPPLPPP--------------------LPSSSPIKTPLVSP 203
Query: 73 RGPSSSATLP--RPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPP------ 124
GP + LP PP P P PPP T P +PP L + + L P
Sbjct: 204 PGPLTKGNLPVVAPPVPCAPPPPPPPPPP---TPPPLPPASVLSDKAVKPQLAPLHLPPI 260
Query: 125 PPPAAAAPP---------PPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPC 175
PPP PP P +PAQ AQ P P P AP P +
Sbjct: 261 PPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLP-GVNSS 319
Query: 176 TAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPG 210
+ P P +P P G LP PP PG
Sbjct: 320 SETPPPLPPKSPSFQAPPQKAG-AQALPAPPAPPG 353
Score = 55.8 bits (133), Expect = 5e-08
Identities = 51/156 (32%), Positives = 56/156 (35%), Gaps = 32/156 (20%)
Query: 5 KSGLPDSVPHT--SPPPYNAPQPPAEPPAPP----------PQAAPSSHHHHHHHYHQSG 52
K LP P +PPP P PP PP PP PQ AP H
Sbjct: 209 KGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPL-----HLPPIPPP 263
Query: 53 TATLPRLGAGGL----ASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMP 108
LP G GL AS A AQ P+ LP +P P PG + P
Sbjct: 264 LPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETP 323
Query: 109 PDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQAP 144
P PLPP P+ APP A AQ AP
Sbjct: 324 P-----------PLPPKSPSFQAPPQKAGAQALPAP 348
Score = 51.6 bits (122), Expect = 9e-07
Identities = 60/208 (28%), Positives = 72/208 (34%), Gaps = 30/208 (14%)
Query: 31 APPPQAAPSSHHHHHHHYHQSGTATLPRLG---AGGLASSAATAQR---------GPSSS 78
AP +++ ++ + G +T P LG AGG QR GP S
Sbjct: 70 APQIESSKGTNKEGGGSANTRGASTPPTLGDLFAGGFPVLRPAGQRDVAGGKTGQGPGSR 129
Query: 79 ATLPRPPHHA-------PPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAA 131
A PR P+ P P G PP P + P PPPPP
Sbjct: 130 APSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPL--- 186
Query: 132 PPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPYAGG 191
PPP P+ + V P T G LP+ VAP P P P P P A
Sbjct: 187 -PPPLPSSSPIKTPLVSPPGPLTKGNLPV---VAPPVPCAPPPPPPPPPPTPPPLPPA-S 241
Query: 192 TPGGTGVTSTLPP---PPQGPGLALLEP 216
V L P PP P L LL P
Sbjct: 242 VLSDKAVKPQLAPLHLPPIPPPLPLLPP 269
Score = 51.6 bits (122), Expect = 9e-07
Identities = 55/168 (32%), Positives = 67/168 (39%), Gaps = 19/168 (11%)
Query: 57 PRLGAGGLASSAA-TAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQE 115
PRLG A AA TA P+ +P PP PP P PPP ++ P P
Sbjct: 150 PRLGNTSEAHGAARTAPPRPN----VPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPG 205
Query: 116 TRFEGPLP---PPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQL 172
+G LP PP P A PPPP P T P + P A + + +A PL L
Sbjct: 206 PLTKGNLPVVAPPVPCAPPPPPPPPPPT---PPPLPP--ASVLSDKAVKPQLA---PLHL 257
Query: 173 QPCTAYVPVY-PVGTPYAGGTPGGTGVTSTLP--PPPQGPGLALLEPR 217
P +P+ P G P P + P PPP P A PR
Sbjct: 258 PPIPPPLPLLPPCGYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPR 305
Score = 48.9 bits (115), Expect = 6e-06
Identities = 43/155 (27%), Positives = 58/155 (37%), Gaps = 28/155 (18%)
Query: 7 GLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLAS 66
G P + P +A +PPA PP PP A+ S A+LP G+ S
Sbjct: 271 GYPGLKAEPASPAQDAQEPPAPPPPLPPYASCSPR------------ASLPAPPLPGVNS 318
Query: 67 SAATAQRGPSSSATLPRPPHHAPPGPAAGAP-PPGCATLPRMPPDPYLQETRFEGP---- 121
S+ T P S + PP A P PPG P+LQ+ R P
Sbjct: 319 SSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGS--------QPFLQKKRHGRPGAGG 370
Query: 122 ---LPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAG 153
PPP P A +P +++ QA + G
Sbjct: 371 GKLNPPPAPPARSPTTELSSKSQQATAWTPTQQPG 405
Score = 47.8 bits (112), Expect = 1e-05
Identities = 58/218 (26%), Positives = 70/218 (32%), Gaps = 36/218 (16%)
Query: 12 VPHTSPPPYNAPQPP-AEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAAT 70
VP PPP P PP PP PPP A P S + T++L R G ++ A
Sbjct: 3 VPPPPPPPLPPPPPPLGAPPPPPPSAPPVS----------TDTSSLRRADPKGRSALLAD 52
Query: 71 AQRGPSSSATLPRPPHHAP---PGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPP 127
Q+G AP G A P L + F G P P
Sbjct: 53 IQQGTRLRKVTQINDRSAPQIESSKGTNKEGGGSANTRGASTPPTLGDL-FAGGFPVLRP 111
Query: 128 AAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTP 187
A A +T Q PG P +P P + T P+ P +P
Sbjct: 112 AGQR--DVAGGKTGQGPGSRAP---------------SPRLPNK----TISGPLIPPASP 150
Query: 188 YAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMP 225
G T G T PP P P P PP P
Sbjct: 151 RLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPP 188
Score = 37.7 bits (86), Expect = 0.013
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 104 LPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPA 138
+P PP P PLPPPPP APPPP P+
Sbjct: 1 MPVPPPPP--------PPLPPPPPPLGAPPPPPPS 27
Score = 31.2 bits (69), Expect = 1.2
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 121 PLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGT 154
P+PPPPP PPPP P P T
Sbjct: 2 PVPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDT 35
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 61.6 bits (148), Expect = 8e-10
Identities = 64/212 (30%), Positives = 72/212 (33%), Gaps = 59/212 (27%)
Query: 13 PHTSPPPYNA----PQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSA 68
P PPP+ A P+PP PP PP P G P L
Sbjct: 223 PGGPPPPFPAGQTPPRPPLGPPGPPGPPGPP----------PPGQVLPPPLA-------- 264
Query: 69 ATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPA 128
GP + P PP PG G PP G LP PP P GP P PPP
Sbjct: 265 -----GPPNRGDRP-PPPVLFPGQPFGQPPLG--PLPPGPPPP----VPGYGPPPGPPPP 312
Query: 129 AAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGTPY 188
PPPP PG P G +G PL L P ++P P G P
Sbjct: 313 QQGPPPP--------PGPFPPRPPGPLGP-----------PLTLAP-PPHLPGPPPGAP- 351
Query: 189 AGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
P V PPP G+ + R PP
Sbjct: 352 ----PPAPHVNPAFFPPPTNSGMPTSDSRGPP 379
Score = 56.6 bits (135), Expect = 3e-08
Identities = 58/181 (32%), Positives = 63/181 (34%), Gaps = 21/181 (11%)
Query: 61 AGGLASSAATAQRGPSSSATLP-------RPPHHAP-----PGPAAGAPPPGCATLPRMP 108
+G ++ G SS A P R P P PGPA PP + P
Sbjct: 177 SGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTP 236
Query: 109 PDPYLQETRFEGPLPPPPPAAAAPPPPA-PAQTAQAPGFVVPTHAGTVGTLPLGGY---- 163
P P L GP PPPP PPP A P P V G PLG
Sbjct: 237 PRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGP 296
Query: 164 --VAPGY-PLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPP 220
PGY P P P P G P+ PG G TL PPP PG P P
Sbjct: 297 PPPVPGYGPPPGPPPPQQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAP 355
Query: 221 H 221
H
Sbjct: 356 H 356
Score = 47.4 bits (111), Expect = 2e-05
Identities = 43/139 (30%), Positives = 44/139 (31%), Gaps = 34/139 (24%)
Query: 7 GLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLAS 66
G P VP PPP P PP + P PPP P PR
Sbjct: 295 GPPPPVPGYGPPP--GPPPPQQGPPPPPGPFP------------------PR-------- 326
Query: 67 SAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPPP 126
GP TL PPH PGP GAPPP P P P PPP
Sbjct: 327 --PPGPLGP--PLTLAPPPH--LPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPP 380
Query: 127 PAAAAPPPPAPAQTAQAPG 145
PPP PG
Sbjct: 381 TDPYGRPPPYDRGDYGPPG 399
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 61.6 bits (148), Expect = 8e-10
Identities = 72/270 (26%), Positives = 91/270 (33%), Gaps = 70/270 (25%)
Query: 9 PDSVPHTSPPPYNAPQPPAEP-------PAPPPQAAPSSHHHHHHHYHQSGTATL----- 56
P P PPP+ +P PP +P P+ P A P H H L
Sbjct: 254 PQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPG 313
Query: 57 --------PRLGAGGLASSAATAQRGPSSSATLP---------RPPHHAPPGPAAGA--- 96
P+ G + A P +S LP +PP P PA A
Sbjct: 314 PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 373
Query: 97 -PPPGCATLPRMP-PDPYLQETRFEGP--------LPPPP------------PAAAAPPP 134
PP +P++P P + GP LPPPP P +A PPP
Sbjct: 374 IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPP 433
Query: 135 --------PAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGT 186
P P+ AQ PG T + + P + + QP A P P G
Sbjct: 434 LQLMPQSQPLPSSPAQPPGL---TQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGP 490
Query: 187 PYAGGTPGGTGVTSTLPPPPQGPGLALLEP 216
P TP TST PP GPG + P
Sbjct: 491 PPI--TPPTCPSTST---PPAGPGTSAQPP 515
Score = 53.1 bits (126), Expect = 3e-07
Identities = 78/282 (27%), Positives = 92/282 (32%), Gaps = 82/282 (29%)
Query: 15 TSPPPY---------NAPQPPAEP---------PAPPPQAAPSSHHHHHHHYHQSGTATL 56
T+ PP N PQ P P PA PQ PS H H H
Sbjct: 217 TAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---PPLQ 273
Query: 57 PRLGAGGLASSAATAQ--------RGPSSSATLPRPPHHAPPGPAAGAPP---PGCATLP 105
P G+ G S+ + AQ GP S P H PP P G PP G A L
Sbjct: 274 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQP-FGLPPQASQGQAPLG 332
Query: 106 RMPPDPY---------------LQETRFEGPLPP---------PPPAAAAPPPPAPAQTA 141
P Y Q+ E PLPP PPP P PAP
Sbjct: 333 TSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 392
Query: 142 QAPGFVVPTHAGTVGTLP----------LGGYVAPGY---PLQLQPCTAYVPVYPVGTPY 188
P P+ LP L + P PLQL P + +P P
Sbjct: 393 HPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSP----- 447
Query: 189 AGGTPGGTGVTSTLPPPPQG---PGLALLEPRRP--PHDYMP 225
P G + LPPPP GL + P+ P H ++P
Sbjct: 448 --AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVP 487
Score = 51.2 bits (121), Expect = 1e-06
Identities = 68/237 (28%), Positives = 81/237 (34%), Gaps = 49/237 (20%)
Query: 13 PHTSPPPYNAPQPPAEPPAPPP----QAAPSSHHHH----HHHYHQSGTATL-PRLGAGG 63
P SP AP P P AP P Q AP+ H H H S L P G+ G
Sbjct: 221 PQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG 280
Query: 64 LASSAATAQR--------GPSSSATLPRPPHHAPPGPAAGAPPP---GCATLPRMPPDPY 112
S+ + AQ GP S P H PP P G PP G A L P Y
Sbjct: 281 QPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF-GLPPQASQGQAPLGTSPAAAY 339
Query: 113 ----LQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGY 168
LQ + L P P PPAP + H T P+ AP
Sbjct: 340 PHTSLQLPASQSALQSQQPPREQPLPPAP---------LAMPHIKPPPTTPIPQLPAP-- 388
Query: 169 PLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMP 225
+P P+ G P + + LPPPP L+ L PP + P
Sbjct: 389 ---------QAHKHP---PHLSG-PSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP 432
Score = 46.6 bits (109), Expect = 3e-05
Identities = 49/175 (28%), Positives = 58/175 (33%), Gaps = 20/175 (11%)
Query: 11 SVPHTSPPPYNAPQPPAE---------PPAPPPQAAPSSHHHHHHHYHQ----SGTATLP 57
S + PP P PPA P P PQ H H H S A LP
Sbjct: 351 SALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLP 410
Query: 58 RLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETR 117
A SS +T + L P + P P++ A PPG +PP P
Sbjct: 411 PPPALKPLSSLSTHHPPSAHPPPLQLMP-QSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 469
Query: 118 FEGPLPPPPPAAAAP-----PPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPG 167
+ P PP A P PPP T + P GT P G A G
Sbjct: 470 GLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTS-TPPAGPGTSAQPPCSGAAASG 523
Score = 46.2 bits (108), Expect = 4e-05
Identities = 63/240 (26%), Positives = 82/240 (34%), Gaps = 55/240 (22%)
Query: 2 SSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGA 61
S+++ L P P P P + PP P P S TA P+
Sbjct: 174 SAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPT--------PSATAVPPQ--- 222
Query: 62 GGLASSAATAQRGPSS--SATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFE 119
+ TA + P+ + T P P H PA P+ PP P+
Sbjct: 223 -----GSPTASQAPNQPQAPTAPVPHTHIQQAPALH---------PQRPPSPH------- 261
Query: 120 GPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPG-YPLQLQPCTAY 178
PPP P +P PP T A P+HA PL G PG + LQ P +
Sbjct: 262 ---PPPHP---SPHPPLQPLTGSAGQPSAPSHAQP----PLHGQGPPGPHSLQAGPLLQH 311
Query: 179 V-PVYPVGTP---YAGGTPGGTGVTSTLP------PPPQGPGLALLEPRRPPHDYMPIAV 228
P P G P G P GT + P P Q + PR P P+A+
Sbjct: 312 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAM 371
Score = 38.5 bits (88), Expect = 0.008
Identities = 40/160 (25%), Positives = 54/160 (33%), Gaps = 33/160 (20%)
Query: 13 PHTSPPPYNA-------PQPPAEPPA--------PPPQAAPSSHHHH--------HHHYH 49
P PPP P PA+PP PPP + P + H H +
Sbjct: 427 PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFV 486
Query: 50 QSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPP 109
G + S +T GP +SA P A G AG LP +
Sbjct: 487 PGGPPPI----TPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGG---SSCPLPTVQI 539
Query: 110 DPYLQETRFEGPLPPPPPAAAAPPP---PAPAQTAQAPGF 146
+ E PPPPP + +P P P+ +Q+ F
Sbjct: 540 KEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARF 579
Score = 31.6 bits (70), Expect = 0.92
Identities = 34/110 (30%), Positives = 38/110 (34%), Gaps = 14/110 (12%)
Query: 34 PQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPA 93
P SH H H H HQ L + AG + GP A P PP P P
Sbjct: 870 PHHHQHSHIHSHLHLHQQD--PLHQGSAGPVHPLVDPLTAGP-HLARFPYPP-GTLPNPL 925
Query: 94 AGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQA 143
G PP L+ F P P P A PPP + A QA
Sbjct: 926 LGQPP---------HEHEMLRHPVFGTPYPRDLP-GAIPPPMSAAHQLQA 965
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 61.6 bits (148), Expect = 8e-10
Identities = 72/270 (26%), Positives = 91/270 (33%), Gaps = 70/270 (25%)
Query: 9 PDSVPHTSPPPYNAPQPPAEP-------PAPPPQAAPSSHHHHHHHYHQSGTATL----- 56
P P PPP+ +P PP +P P+ P A P H H L
Sbjct: 808 PQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPG 867
Query: 57 --------PRLGAGGLASSAATAQRGPSSSATLP---------RPPHHAPPGPAAGA--- 96
P+ G + A P +S LP +PP P PA A
Sbjct: 868 PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 927
Query: 97 -PPPGCATLPRMP-PDPYLQETRFEGP--------LPPPP------------PAAAAPPP 134
PP +P++P P + GP LPPPP P +A PPP
Sbjct: 928 IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPP 987
Query: 135 --------PAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGT 186
P P+ AQ PG T + + P + + QP A P P G
Sbjct: 988 LQLMPQSQPLPSSPAQPPGL---TQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGP 1044
Query: 187 PYAGGTPGGTGVTSTLPPPPQGPGLALLEP 216
P TP TST PP GPG + P
Sbjct: 1045 PPI--TPPTCPSTST---PPAGPGTSAQPP 1069
Score = 53.1 bits (126), Expect = 3e-07
Identities = 78/282 (27%), Positives = 92/282 (32%), Gaps = 82/282 (29%)
Query: 15 TSPPPY---------NAPQPPAEP---------PAPPPQAAPSSHHHHHHHYHQSGTATL 56
T+ PP N PQ P P PA PQ PS H H H
Sbjct: 771 TAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---PPLQ 827
Query: 57 PRLGAGGLASSAATAQ--------RGPSSSATLPRPPHHAPPGPAAGAPP---PGCATLP 105
P G+ G S+ + AQ GP S P H PP P G PP G A L
Sbjct: 828 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQP-FGLPPQASQGQAPLG 886
Query: 106 RMPPDPY---------------LQETRFEGPLPP---------PPPAAAAPPPPAPAQTA 141
P Y Q+ E PLPP PPP P PAP
Sbjct: 887 TSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 946
Query: 142 QAPGFVVPTHAGTVGTLP----------LGGYVAPGY---PLQLQPCTAYVPVYPVGTPY 188
P P+ LP L + P PLQL P + +P P
Sbjct: 947 HPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSP----- 1001
Query: 189 AGGTPGGTGVTSTLPPPPQG---PGLALLEPRRP--PHDYMP 225
P G + LPPPP GL + P+ P H ++P
Sbjct: 1002 --AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVP 1041
Score = 51.2 bits (121), Expect = 1e-06
Identities = 68/237 (28%), Positives = 81/237 (34%), Gaps = 49/237 (20%)
Query: 13 PHTSPPPYNAPQPPAEPPAPPP----QAAPSSHHHH----HHHYHQSGTATL-PRLGAGG 63
P SP AP P P AP P Q AP+ H H H S L P G+ G
Sbjct: 775 PQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG 834
Query: 64 LASSAATAQR--------GPSSSATLPRPPHHAPPGPAAGAPPP---GCATLPRMPPDPY 112
S+ + AQ GP S P H PP P G PP G A L P Y
Sbjct: 835 QPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF-GLPPQASQGQAPLGTSPAAAY 893
Query: 113 ----LQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGY 168
LQ + L P P PPAP + H T P+ AP
Sbjct: 894 PHTSLQLPASQSALQSQQPPREQPLPPAP---------LAMPHIKPPPTTPIPQLPAP-- 942
Query: 169 PLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMP 225
+P P+ G P + + LPPPP L+ L PP + P
Sbjct: 943 ---------QAHKHP---PHLSG-PSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP 986
Score = 46.6 bits (109), Expect = 3e-05
Identities = 49/175 (28%), Positives = 58/175 (33%), Gaps = 20/175 (11%)
Query: 11 SVPHTSPPPYNAPQPPAE---------PPAPPPQAAPSSHHHHHHHYHQ----SGTATLP 57
S + PP P PPA P P PQ H H H S A LP
Sbjct: 905 SALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLP 964
Query: 58 RLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETR 117
A SS +T + L P + P P++ A PPG +PP P
Sbjct: 965 PPPALKPLSSLSTHHPPSAHPPPLQLMP-QSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 1023
Query: 118 FEGPLPPPPPAAAAP-----PPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPG 167
+ P PP A P PPP T + P GT P G A G
Sbjct: 1024 GLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTS-TPPAGPGTSAQPPCSGAAASG 1077
Score = 46.2 bits (108), Expect = 4e-05
Identities = 63/240 (26%), Positives = 82/240 (34%), Gaps = 55/240 (22%)
Query: 2 SSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGA 61
S+++ L P P P P + PP P P S TA P+
Sbjct: 728 SAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPT--------PSATAVPPQ--- 776
Query: 62 GGLASSAATAQRGPSS--SATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFE 119
+ TA + P+ + T P P H PA P+ PP P+
Sbjct: 777 -----GSPTASQAPNQPQAPTAPVPHTHIQQAPALH---------PQRPPSPH------- 815
Query: 120 GPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPG-YPLQLQPCTAY 178
PPP P +P PP T A P+HA PL G PG + LQ P +
Sbjct: 816 ---PPPHP---SPHPPLQPLTGSAGQPSAPSHAQP----PLHGQGPPGPHSLQAGPLLQH 865
Query: 179 V-PVYPVGTP---YAGGTPGGTGVTSTLP------PPPQGPGLALLEPRRPPHDYMPIAV 228
P P G P G P GT + P P Q + PR P P+A+
Sbjct: 866 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAM 925
Score = 38.5 bits (88), Expect = 0.008
Identities = 40/160 (25%), Positives = 54/160 (33%), Gaps = 33/160 (20%)
Query: 13 PHTSPPPYNA-------PQPPAEPPA--------PPPQAAPSSHHHH--------HHHYH 49
P PPP P PA+PP PPP + P + H H +
Sbjct: 981 PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFV 1040
Query: 50 QSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPP 109
G + S +T GP +SA P A G AG LP +
Sbjct: 1041 PGGPPPI----TPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGG---SSCPLPTVQI 1093
Query: 110 DPYLQETRFEGPLPPPPPAAAAPPP---PAPAQTAQAPGF 146
+ E PPPPP + +P P P+ +Q+ F
Sbjct: 1094 KEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARF 1133
Score = 31.6 bits (70), Expect = 0.92
Identities = 34/110 (30%), Positives = 38/110 (34%), Gaps = 14/110 (12%)
Query: 34 PQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPA 93
P SH H H H HQ L + AG + GP A P PP P P
Sbjct: 1424 PHHHQHSHIHSHLHLHQQD--PLHQGSAGPVHPLVDPLTAGP-HLARFPYPP-GTLPNPL 1479
Query: 94 AGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQA 143
G PP L+ F P P P A PPP + A QA
Sbjct: 1480 LGQPP---------HEHEMLRHPVFGTPYPRDLP-GAIPPPMSAAHQLQA 1519
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 61.6 bits (148), Expect = 8e-10
Identities = 72/270 (26%), Positives = 91/270 (33%), Gaps = 70/270 (25%)
Query: 9 PDSVPHTSPPPYNAPQPPAEP-------PAPPPQAAPSSHHHHHHHYHQSGTATL----- 56
P P PPP+ +P PP +P P+ P A P H H L
Sbjct: 808 PQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPG 867
Query: 57 --------PRLGAGGLASSAATAQRGPSSSATLP---------RPPHHAPPGPAAGA--- 96
P+ G + A P +S LP +PP P PA A
Sbjct: 868 PPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPH 927
Query: 97 -PPPGCATLPRMP-PDPYLQETRFEGP--------LPPPP------------PAAAAPPP 134
PP +P++P P + GP LPPPP P +A PPP
Sbjct: 928 IKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPP 987
Query: 135 --------PAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAYVPVYPVGT 186
P P+ AQ PG T + + P + + QP A P P G
Sbjct: 988 LQLMPQSQPLPSSPAQPPGL---TQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGP 1044
Query: 187 PYAGGTPGGTGVTSTLPPPPQGPGLALLEP 216
P TP TST PP GPG + P
Sbjct: 1045 PPI--TPPTCPSTST---PPAGPGTSAQPP 1069
Score = 53.1 bits (126), Expect = 3e-07
Identities = 78/282 (27%), Positives = 92/282 (32%), Gaps = 82/282 (29%)
Query: 15 TSPPPY---------NAPQPPAEP---------PAPPPQAAPSSHHHHHHHYHQSGTATL 56
T+ PP N PQ P P PA PQ PS H H H
Sbjct: 771 TAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPH---PPLQ 827
Query: 57 PRLGAGGLASSAATAQ--------RGPSSSATLPRPPHHAPPGPAAGAPP---PGCATLP 105
P G+ G S+ + AQ GP S P H PP P G PP G A L
Sbjct: 828 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQP-FGLPPQASQGQAPLG 886
Query: 106 RMPPDPY---------------LQETRFEGPLPP---------PPPAAAAPPPPAPAQTA 141
P Y Q+ E PLPP PPP P PAP
Sbjct: 887 TSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHK 946
Query: 142 QAPGFVVPTHAGTVGTLP----------LGGYVAPGY---PLQLQPCTAYVPVYPVGTPY 188
P P+ LP L + P PLQL P + +P P
Sbjct: 947 HPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSP----- 1001
Query: 189 AGGTPGGTGVTSTLPPPPQG---PGLALLEPRRP--PHDYMP 225
P G + LPPPP GL + P+ P H ++P
Sbjct: 1002 --AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVP 1041
Score = 51.2 bits (121), Expect = 1e-06
Identities = 68/237 (28%), Positives = 81/237 (34%), Gaps = 49/237 (20%)
Query: 13 PHTSPPPYNAPQPPAEPPAPPP----QAAPSSHHHH----HHHYHQSGTATL-PRLGAGG 63
P SP AP P P AP P Q AP+ H H H S L P G+ G
Sbjct: 775 PQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG 834
Query: 64 LASSAATAQR--------GPSSSATLPRPPHHAPPGPAAGAPPP---GCATLPRMPPDPY 112
S+ + AQ GP S P H PP P G PP G A L P Y
Sbjct: 835 QPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF-GLPPQASQGQAPLGTSPAAAY 893
Query: 113 ----LQETRFEGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGY 168
LQ + L P P PPAP + H T P+ AP
Sbjct: 894 PHTSLQLPASQSALQSQQPPREQPLPPAP---------LAMPHIKPPPTTPIPQLPAP-- 942
Query: 169 PLQLQPCTAYVPVYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMP 225
+P P+ G P + + LPPPP L+ L PP + P
Sbjct: 943 ---------QAHKHP---PHLSG-PSPFSMNANLPPPPALKPLSSLSTHHPPSAHPP 986
Score = 46.6 bits (109), Expect = 3e-05
Identities = 49/175 (28%), Positives = 58/175 (33%), Gaps = 20/175 (11%)
Query: 11 SVPHTSPPPYNAPQPPAE---------PPAPPPQAAPSSHHHHHHHYHQ----SGTATLP 57
S + PP P PPA P P PQ H H H S A LP
Sbjct: 905 SALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLP 964
Query: 58 RLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETR 117
A SS +T + L P + P P++ A PPG +PP P
Sbjct: 965 PPPALKPLSSLSTHHPPSAHPPPLQLMP-QSQPLPSSPAQPPGLTQSQNLPPPPASHPPT 1023
Query: 118 FEGPLPPPPPAAAAP-----PPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPG 167
+ P PP A P PPP T + P GT P G A G
Sbjct: 1024 GLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTS-TPPAGPGTSAQPPCSGAAASG 1077
Score = 46.2 bits (108), Expect = 4e-05
Identities = 63/240 (26%), Positives = 82/240 (34%), Gaps = 55/240 (22%)
Query: 2 SSEKSGLPDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGA 61
S+++ L P P P P + PP P P S TA P+
Sbjct: 728 SAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPT--------PSATAVPPQ--- 776
Query: 62 GGLASSAATAQRGPSS--SATLPRPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFE 119
+ TA + P+ + T P P H PA P+ PP P+
Sbjct: 777 -----GSPTASQAPNQPQAPTAPVPHTHIQQAPALH---------PQRPPSPH------- 815
Query: 120 GPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPG-YPLQLQPCTAY 178
PPP P +P PP T A P+HA PL G PG + LQ P +
Sbjct: 816 ---PPPHP---SPHPPLQPLTGSAGQPSAPSHAQP----PLHGQGPPGPHSLQAGPLLQH 865
Query: 179 V-PVYPVGTP---YAGGTPGGTGVTSTLP------PPPQGPGLALLEPRRPPHDYMPIAV 228
P P G P G P GT + P P Q + PR P P+A+
Sbjct: 866 PGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAM 925
Score = 38.5 bits (88), Expect = 0.008
Identities = 40/160 (25%), Positives = 54/160 (33%), Gaps = 33/160 (20%)
Query: 13 PHTSPPPYNA-------PQPPAEPPA--------PPPQAAPSSHHHH--------HHHYH 49
P PPP P PA+PP PPP + P + H H +
Sbjct: 981 PSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFV 1040
Query: 50 QSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCATLPRMPP 109
G + S +T GP +SA P A G AG LP +
Sbjct: 1041 PGGPPPI----TPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGG---SSCPLPTVQI 1093
Query: 110 DPYLQETRFEGPLPPPPPAAAAPPP---PAPAQTAQAPGF 146
+ E PPPPP + +P P P+ +Q+ F
Sbjct: 1094 KEEALDDAEEPESPPPPPRSPSPEPTVVDTPSHASQSARF 1133
Score = 31.6 bits (70), Expect = 0.92
Identities = 34/110 (30%), Positives = 38/110 (34%), Gaps = 14/110 (12%)
Query: 34 PQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPA 93
P SH H H H HQ L + AG + GP A P PP P P
Sbjct: 1424 PHHHQHSHIHSHLHLHQQD--PLHQGSAGPVHPLVDPLTAGP-HLARFPYPP-GTLPNPL 1479
Query: 94 AGAPPPGCATLPRMPPDPYLQETRFEGPLPPPPPAAAAPPPPAPAQTAQA 143
G PP L+ F P P P A PPP + A QA
Sbjct: 1480 LGQPP---------HEHEMLRHPVFGTPYPRDLP-GAIPPPMSAAHQLQA 1519
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 61.2 bits (147), Expect = 1e-09
Identities = 49/137 (35%), Positives = 55/137 (40%), Gaps = 24/137 (17%)
Query: 9 PDSVPHTSPPPYNAPQPPAEPPAPPPQAAPSSHHHHHHHYHQSGTATLPRLGAGGLAS-- 66
P P +P A PP P APPP AP + + A PR A +
Sbjct: 111 PPRAPRGAPAAAAAAAPPPTP-APPPPPAPVA---------AAAPARAPRAAAAAATAPP 160
Query: 67 SAATAQRGPSSSATLP-RPPHHAPPGPAAGAPPPGCATLPRMPPDPYLQETRFEGPLPPP 125
S AQ GP + P P AP P A APP G PR P P + E PLPPP
Sbjct: 161 SPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAG----PRRAPPPAVAAR--EPPLPPP 214
Query: 126 -----PPAAAAPPPPAP 137
PP PPPP P
Sbjct: 215 PQPPAPPQQQQPPPPQP 231
Score = 57.0 bits (136), Expect = 2e-08
Identities = 51/169 (30%), Positives = 55/169 (32%), Gaps = 28/169 (16%)
Query: 62 GGLASSAATAQRGPSSSATLPRPPHH---APPGPAAGAPPPGCATLPRMPPDPYLQETRF 118
G ++ A + P AT P PP AP AA APPP
Sbjct: 89 GSISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPT------------------ 130
Query: 119 EGPLPPPPPAAAAPPPPAPAQTAQAPGFVVPTHAGTVGTLPLGGYVAPGYPLQLQPCTAY 178
P PPPPPA A PA A A A P G P A PL P
Sbjct: 131 --PAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAA---PLAAPPPAPA 185
Query: 179 VP--VYPVGTPYAGGTPGGTGVTSTLPPPPQGPGLALLEPRRPPHDYMP 225
P V P P P LPPPPQ P + PP P
Sbjct: 186 APPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPP 234
Score = 56.2 bits (134), Expect = 3e-08
Identities = 50/150 (33%), Positives = 63/150 (42%), Gaps = 28/150 (18%)
Query: 11 SVPHTSPPPYNAPQPPAEPPAPP--PQAAPSSHHHHHHHYHQSGTATLPRLGAGGLASSA 68
S+ + + P+ A PPAPP P+ AP++ T P A A++
Sbjct: 90 SISYRNAARVQPPRRGATPPAPPRAPRGAPAAAAAAA----PPPTPAPPPPPAPVAAAAP 145
Query: 69 ATAQRGPSSSATLPRPPHHAPPGPAA------GAPPPGCATLPRMPPDPYLQETRFEGP- 121
A A R +++AT P P A PGP A APPP A P + P GP
Sbjct: 146 ARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPA--------GPR 197
Query: 122 -LPPPPPAAAAPP------PPAPAQTAQAP 144
PPP AA PP PPAP Q Q P
Sbjct: 198 RAPPPAVAAREPPLPPPPQPPAPPQQQQPP 227
Score = 30.0 bits (66), Expect = 2.7
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 17 PPPYNAPQPPAEPPAPPPQAAP 38
PPP P PP + PPPQ P
Sbjct: 212 PPPPQPPAPPQQQQPPPPQPQP 233
Score = 28.9 bits (63), Expect = 6.0
Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 51 SGTATLPRLGAGGLASSAATAQRGPSSSATLPRPPHHAPPGPAAGAPPPGCAT-LPRMPP 109
SGT + + A A+ GP S + +P PP P P A P GC P
Sbjct: 399 SGTRQVFSMAAMNKEGGTASVATGPDSPSPVPLPP-GKPALPGADGTPFGCPPGRKEKPS 457
Query: 110 DP 111
DP
Sbjct: 458 DP 459
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,802,949
Number of Sequences: 37866
Number of extensions: 1612115
Number of successful extensions: 52794
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 1901
Number of HSP's that attempted gapping in prelim test: 15084
Number of HSP's gapped (non-prelim): 18269
length of query: 306
length of database: 18,247,518
effective HSP length: 102
effective length of query: 204
effective length of database: 14,385,186
effective search space: 2934577944
effective search space used: 2934577944
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.