BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7661708 feline leukemia virus subgroup C cellular receptor 1
[Homo sapiens]
(555 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7661708 feline leukemia virus subgroup C cellular receptor 1 ... 1104 0.0
gi|190341091 feline leukemia virus subgroup C cellular receptor ... 558 e-159
gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens] 157 3e-38
gi|31542731 major facilitator superfamily domain containing 7 [H... 156 4e-38
gi|40556370 PHD finger protein 15 [Homo sapiens] 39 0.010
gi|4503847 solute carrier family 37 (glucose-6-phosphate transpo... 38 0.028
gi|110815800 WD repeat domain 32 [Homo sapiens] 37 0.047
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 36 0.11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.14
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 35 0.24
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 35 0.24
gi|18699730 solute carrier family 16, member 10 [Homo sapiens] 34 0.31
gi|4885441 solute carrier family 17 (sodium phosphate), member 4... 34 0.31
gi|38787970 tensin like C1 domain containing phosphatase isoform... 34 0.40
gi|38787957 tensin like C1 domain containing phosphatase isoform... 34 0.40
gi|38787941 tensin like C1 domain containing phosphatase isoform... 34 0.40
gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens] 33 0.68
gi|154146199 sal-like 3 [Homo sapiens] 33 0.68
gi|71143127 IQ motif and Sec7 domain 3 [Homo sapiens] 33 0.89
gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo sapi... 32 1.5
gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens] 32 1.5
gi|110832843 TBP-associated factor 4 [Homo sapiens] 32 2.0
gi|6912666 sialin [Homo sapiens] 32 2.0
gi|62422561 p21-activated kinase 4 isoform 2 [Homo sapiens] 32 2.0
gi|62422563 p21-activated kinase 4 isoform 2 [Homo sapiens] 32 2.0
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 32 2.0
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 32 2.0
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 32 2.0
gi|169210256 PREDICTED: hypothetical protein [Homo sapiens] 31 2.6
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens] 31 2.6
>gi|7661708 feline leukemia virus subgroup C cellular receptor 1
[Homo sapiens]
Length = 555
Score = 1104 bits (2855), Expect = 0.0
Identities = 555/555 (100%), Positives = 555/555 (100%)
Query: 1 MARPDDEEGAAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAA 60
MARPDDEEGAAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAA
Sbjct: 1 MARPDDEEGAAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAA 60
Query: 61 SGVLGGPQTPLAPEEETQARLLPAGAGAETPGAESSPLPLTALSPRRFVVLLIFSLYSLV 120
SGVLGGPQTPLAPEEETQARLLPAGAGAETPGAESSPLPLTALSPRRFVVLLIFSLYSLV
Sbjct: 61 SGVLGGPQTPLAPEEETQARLLPAGAGAETPGAESSPLPLTALSPRRFVVLLIFSLYSLV 120
Query: 121 NAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLG 180
NAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLG
Sbjct: 121 NAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLG 180
Query: 181 SGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVFILGLPSRIASVWFGPKEVSTACAT 240
SGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVFILGLPSRIASVWFGPKEVSTACAT
Sbjct: 181 SGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVFILGLPSRIASVWFGPKEVSTACAT 240
Query: 241 AVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGTSAVATLLFILTAIAFKEKP 300
AVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGTSAVATLLFILTAIAFKEKP
Sbjct: 241 AVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGTSAVATLLFILTAIAFKEKP 300
Query: 301 RYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVSTLLNQMIL 360
RYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVSTLLNQMIL
Sbjct: 301 RYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVSTLLNQMIL 360
Query: 361 TYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIVYILSFIGMVIFTFTL 420
TYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIVYILSFIGMVIFTFTL
Sbjct: 361 TYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIVYILSFIGMVIFTFTL 420
Query: 421 DLRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLA 480
DLRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLA
Sbjct: 421 DLRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLA 480
Query: 481 QGKLTSDYGPKAGNIFLCVWMFIGIILTALIKSDLRRHNINIGITNVDVKAIPADSPTDQ 540
QGKLTSDYGPKAGNIFLCVWMFIGIILTALIKSDLRRHNINIGITNVDVKAIPADSPTDQ
Sbjct: 481 QGKLTSDYGPKAGNIFLCVWMFIGIILTALIKSDLRRHNINIGITNVDVKAIPADSPTDQ 540
Query: 541 EPKTVMLSKQSESAI 555
EPKTVMLSKQSESAI
Sbjct: 541 EPKTVMLSKQSESAI 555
>gi|190341091 feline leukemia virus subgroup C cellular receptor
family, member 2 [Homo sapiens]
Length = 526
Score = 558 bits (1439), Expect = e-159
Identities = 281/509 (55%), Positives = 362/509 (71%), Gaps = 9/509 (1%)
Query: 38 LQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAPEEETQARLLPAGAGAETPGAES-S 96
LQ P P S++ V P + P L +G P +
Sbjct: 21 LQADPSVSVHP-------SVSVHPSVSINPSVSVHPSSSAHPSALAQPSGLAHPSSSGPE 73
Query: 97 PLPLTALSPRRFVVLLIFSLYSLVNAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLA 156
L + +S RR+ V+L+FS YS+ N+FQWIQY I+N+F FYGV+ IDWLSM YML
Sbjct: 74 DLSVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLT 133
Query: 157 YVPLIFPATWLLDTRGLRLTALLGSGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVF 216
Y+PL+ P WLL+ GLR AL GS LNCLGAW+K GS++ HLF VT++GQ +CSVAQVF
Sbjct: 134 YIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVVGQLICSVAQVF 193
Query: 217 ILGLPSRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNIST 276
ILG+PSRIASVWFG EVSTAC+ AV GNQLG A+GFL+PPVLVPN + D + LA +IS
Sbjct: 194 ILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIE-DRDELAYHISI 252
Query: 277 MFYGTSAVATLLFILTAIAFKEKPRYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVL 336
MFY VATLL IL I FKEKP+YPPS+AQ+ + SY SI LFKN+ FVL
Sbjct: 253 MFYIIGGVATLLLILVIIVFKEKPKYPPSRAQSLSYALTSPDASYLGSIARLFKNLNFVL 312
Query: 337 LLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTK 396
L+ITYG+ GAFY++STLLN+M++ +Y GEEVNAGRIGLT+V+AGM+G+++ G+WLD +K
Sbjct: 313 LVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGIWLDRSK 372
Query: 397 TYKQTTLIVYILSFIGMVIFTFTLDLRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYP 456
TYK+TTL+VYI++ +GMV++TFTL+L ++ +VF+T G +GFFMTGYLPLGFEFAVE+TYP
Sbjct: 373 TYKETTLVVYIMTLVGMVVYTFTLNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYP 432
Query: 457 ESEGTSSGLLNASAQIFGILFTLAQGKLTSDYGPKAGNIFLCVWMFIGIILTALIKSDLR 516
ESEG SSGLLN SAQ+FGI+FT++QG++ +YG K GNIFLCV++ +G LTA IK+DLR
Sbjct: 433 ESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFLCVFLTLGAALTAFIKADLR 492
Query: 517 RHNINIGITNVDVKAIPADSPTDQEPKTV 545
R N ++ +S T + P V
Sbjct: 493 RQKANKETLENKLQEEEEESNTSKVPTAV 521
>gi|14249552 disrupted in renal carcinoma 2 [Homo sapiens]
Length = 478
Score = 157 bits (396), Expect = 3e-38
Identities = 128/432 (29%), Positives = 203/432 (46%), Gaps = 37/432 (8%)
Query: 74 EEETQARLLPA---GAGAETPGAESSPLPLTALSP-------RRFVVLLIFSLYSLVNAF 123
EEE Q L P G GA E++ L A P RR++VLL+FSL + V
Sbjct: 8 EEERQPLLGPGLGPGLGASWRSREAAAAALPAAVPGPGRVYGRRWLVLLLFSLLAFVQGL 67
Query: 124 QWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLGSGL 183
W + I N YG + I L + + ++P F WLLD RGLR+T LL S L
Sbjct: 68 VWNTWGPIQNSARQAYGFSSWDIALLVLWGPIGFLPC-FAFMWLLDKRGLRITVLLTSFL 126
Query: 184 NCLGAWIKCGSVQQHLFWVTML--GQCLCSVAQVFILGLPSRIASVWFGPKEVSTACATA 241
LG ++C + + ++ GQ L +A ++ +++ WF E +TA A A
Sbjct: 127 MVLGTGLRCIPISDLILKRRLIHGGQMLNGLAGPTVMNAAPFLSTTWFSADERATATAIA 186
Query: 242 VLGNQLGTAVGFLLPPVLVPNTQNDTNLLAC---------NISTMFYGTSAVATLLFILT 292
+ + LG A FL+ P++VP + LLA I + Y V L+F T
Sbjct: 187 SMLSYLGGACAFLVGPLVVPAPNGTSPLLAAESSRAHIKDRIEAVLYAEFGVVCLIFSAT 246
Query: 293 AIAFKEKPRYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVS 352
F +P PPS A A+ + SY++S+ L N F+++ + Y I G F S
Sbjct: 247 LAYFPPRPPLPPSVAAAS------QRLSYRRSVCRLLSNFRFLMIALAYAIPLGVFAGWS 300
Query: 353 TLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTK-TYKQTTLIVYILSFI 411
+L+ +ILT +V+AG IG +V G V I + D+ + K L+++ + +
Sbjct: 301 GVLD-LILTPAHVSQVDAGWIGFWSIVGGCVVGIAMARFADFIRGMLKLILLLLFSGATL 359
Query: 412 GMVIFTFTL--DLRYI----IIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGL 465
FT T + ++ + ++ + +LG F+ +P+ FE VE YP EG + G+
Sbjct: 360 SSTWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSVPIFFELFVETVYPVPEGITCGV 419
Query: 466 LNASAQIF-GIL 476
+ + +F G+L
Sbjct: 420 VTFLSNMFMGVL 431
>gi|31542731 major facilitator superfamily domain containing 7 [Homo
sapiens]
Length = 559
Score = 156 bits (395), Expect = 4e-38
Identities = 115/385 (29%), Positives = 189/385 (49%), Gaps = 18/385 (4%)
Query: 106 RRFVVLLIFSLYSLVNAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPAT 165
RR+V LL SL + NA W+ ++ +++V +++ I+WLS+VY++ P A
Sbjct: 28 RRWVFLLAISLLNCSNATLWLSFAPVADVIAEDLVLSMEQINWLSLVYLVVSTPFGVAAI 87
Query: 166 WLLDTRGLRLTALLGSGLNCLGA---WIKCGSV-QQHLFWVTMLGQCLCSVAQVFILGLP 221
W+LD+ GLR +LG+ LN G+ + C V Q+ F M GQ LC++AQ ++ P
Sbjct: 88 WILDSVGLRAATILGAWLNFAGSVLRMVPCMVVGTQNPFAFLMGGQSLCALAQSLVIFSP 147
Query: 222 SRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGT 281
+++A++WF + +TA A + N LG V +L PVLV + +I M
Sbjct: 148 AKLAALWFPEHQRATANMLATMSNPLGVLVANVLSPVLVKKGE--------DIPLMLGVY 199
Query: 282 SAVATLLFILTAIAFKEKPRYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVLLLITY 341
+ A ++ +L+ I E PP+ A S E+ + ++ L N +V+L +
Sbjct: 200 TIPAGVVCLLSTICLWES--VPPTPPSAGAASSTSEK--FLDGLKLLMWNKAYVILAVCL 255
Query: 342 GIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQT 401
G M G S S LL Q++ +G G + G++G++ G ++D TK + +
Sbjct: 256 GGMIGISASFSALLEQILCASGHSSGF-SGLCGALFITFGILGALALGPYVDRTKHFTEA 314
Query: 402 TLIVYILSFIGMVIFTFTLDLR-YIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEG 460
T I L + V F L+ + + T +LG F P+ E AVE ++P EG
Sbjct: 315 TKIGLCLFSLACVPFALVSQLQGQTLALAATCSLLGLFGFSVGPVAMELAVECSFPVGEG 374
Query: 461 TSSGLLNASAQIFGILFTLAQGKLT 485
++G++ Q GIL LA LT
Sbjct: 375 AATGMIFVLGQAEGILIMLAMTALT 399
>gi|40556370 PHD finger protein 15 [Homo sapiens]
Length = 790
Score = 39.3 bits (90), Expect = 0.010
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 20 KGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAPEEETQA 79
KG P P + S L + P AG P+ P PLAPE +A
Sbjct: 637 KGGQGPPTRKPPRRTSSHLPSSPAAGDCPILATPESP------------PPLAPETPDEA 684
Query: 80 RLLPAGAGAETPGAESSPLPLTALSPRR 107
+ A + + PG +SP PL L P R
Sbjct: 685 ASVAADSDVQVPGPAASPKPLGRLRPPR 712
>gi|4503847 solute carrier family 37 (glucose-6-phosphate
transporter), member 4 [Homo sapiens]
Length = 429
Score = 37.7 bits (86), Expect = 0.028
Identities = 73/346 (21%), Positives = 129/346 (37%), Gaps = 51/346 (14%)
Query: 164 ATWLLDTRGLRLTALLGSGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVFILGLP-- 221
A WL + GL L L+ N AW V L+++ L Q L G P
Sbjct: 76 ARWLFSS-GLLLVGLV----NIFFAWSSTVPVFAALWFLNGLAQGL---------GWPPC 121
Query: 222 SRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGT 281
++ WF P + T A L +G +L +L + + L +
Sbjct: 122 GKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSWRSTLAL---------S 172
Query: 282 SAVATLLFILTAIAFKEKPRYPPSQAQAALQDSPPEEYSYKK-------SIRNLFKNIPF 334
A+ ++ L + +P A L++ P KK +++ L + P+
Sbjct: 173 GALCVVVSFLCLLLIHNEP------ADVGLRNLDPMPSEGKKGSLKEESTLQELLLS-PY 225
Query: 335 VLLLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLT-LVVAGMVGSILCGLWLD 393
+ +L T ++ + T Q L +G+ G ++ L V G+VGSI G D
Sbjct: 226 LWVLSTGYLVVFGVKTCCTDWGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSD 285
Query: 394 YTKTYKQTT--------LIVYILSFIGMVIFTFTLDLRYI---IIVFVTGGVLGFFMTGY 442
+ L++++++ + + ++ F + + + + V G V GF G
Sbjct: 286 RAMAKAGLSNYGNPRHGLLLFMMAGMTVSMYLFRVTVTSDSPKLWILVLGAVFGFSSYGP 345
Query: 443 LPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLAQGKLTSDY 488
+ L A E P GTS ++ A + G L L + Y
Sbjct: 346 IALFGVIANESAPPNLCGTSHAIVGLMANVGGFLAGLPFSTIAKHY 391
>gi|110815800 WD repeat domain 32 [Homo sapiens]
Length = 559
Score = 37.0 bits (84), Expect = 0.047
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 8/98 (8%)
Query: 4 PDDEEGAAVAPGHPLAKG----YLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAA 59
P + + AA P PL G + P P +P + L P++G + GAP S A+
Sbjct: 24 PHEGQAAATGPPSPLHPGADATHPPPPARSPRRPGAPSLSPAPRSGELGLPGAPESSTAS 83
Query: 60 ASGVLGGPQTPL---APEEETQAR-LLPAGAGAETPGA 93
A G P P P+ ++R GAG PGA
Sbjct: 84 APGEPSPPSPPCRRPGPDCRAKSRGRHGLGAGLGGPGA 121
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 35.8 bits (81), Expect = 0.11
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 13 APGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLA 72
AP P + P P G E++ + P+ P PR+S A G P +P
Sbjct: 117 APTRPPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPPRESPAPRPFRWGDPFSPAP 176
Query: 73 PEEETQARLLPAGAGAETPGAESSPLPLTALSPRRFVVLLI 113
P + +R PA P A SP P+ PRR VV+ +
Sbjct: 177 PRPQPPSR--PAAQPPSRP-AFRSPRPVRGPHPRRAVVVAV 214
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 35.4 bits (80), Expect = 0.14
Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 6/100 (6%)
Query: 11 AVAPGHPLAK-GYLPLPRGA--PVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGP 67
AV P P P P+GA P + P A P GAP A GGP
Sbjct: 1013 AVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLP-KGAPTTPAATLPSPKGGP 1071
Query: 68 QTPLAPEEETQARLLPAG--AGAETPGAESSPLPLTALSP 105
TP T P G TP + +P+P A P
Sbjct: 1072 ATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPP 1111
Score = 33.9 bits (76), Expect = 0.40
Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 8/101 (7%)
Query: 10 AAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAG--TFPVNGAPRDSLAAASGVLGGP 67
AA P + PLP+GAP + PK G T + GAP A GGP
Sbjct: 1037 AATPPSPKGSPAATPLPKGAPTTPAAT--LPSPKGGPATPSLKGAPTPPAATPPSPKGGP 1094
Query: 68 QTPL---APEEETQARLLPAGAGAETPGAESSPLPLTALSP 105
TP AP P G G TP + +P A P
Sbjct: 1095 ATPSPKGAPMPPAATPPSPKG-GLATPPHKGAPTTPAATPP 1134
Score = 33.1 bits (74), Expect = 0.68
Identities = 33/106 (31%), Positives = 38/106 (35%), Gaps = 10/106 (9%)
Query: 8 EGAAVAPGH--PLAKGYL--PLPRGAPVGKESVELQNGPKAG--TFPVNGAPRDSLAAAS 61
+GA P P KG L P P+GAP + PK G T GAP A
Sbjct: 1192 KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATP--PSPKGGLATPSPKGAPTTPAATPP 1249
Query: 62 GVLGGPQTPLAPEEETQARLLPAG--AGAETPGAESSPLPLTALSP 105
GGP TP T P G TP + +P P P
Sbjct: 1250 SPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPP 1295
Score = 32.3 bits (72), Expect = 1.2
Identities = 30/100 (30%), Positives = 35/100 (35%), Gaps = 7/100 (7%)
Query: 11 AVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAG--TFPVNGAPRDSLAAASGVLGGPQ 68
A P P P P+ AP + PK G T GAP A GGP
Sbjct: 944 AATPPSPKGGPATPSPKWAPTPPAATP--PSPKGGPATPSPKGAPTPPAATPPSPKGGPA 1001
Query: 69 TPL---APEEETQARLLPAGAGAETPGAESSPLPLTALSP 105
TP AP P G+ A TP + + P A P
Sbjct: 1002 TPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041
Score = 31.2 bits (69), Expect = 2.6
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 7/105 (6%)
Query: 2 ARPDDEEGAAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAAS 61
A P + G A+ P P +P P+G P + L PK P R+ A S
Sbjct: 1374 ATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPL--SPKKA--PATPVTREGAATPS 1429
Query: 62 -GVLGGPQTPLAPEEETQARLLPAGAGAETPGAESSPLPLTALSP 105
G L P ++ A P G G TP ++ P L A++P
Sbjct: 1430 KGDLTPPAVTPVSLKKAPATSAPKG-GPATPSSKGDP-TLPAVTP 1472
Score = 30.8 bits (68), Expect = 3.4
Identities = 35/116 (30%), Positives = 41/116 (35%), Gaps = 23/116 (19%)
Query: 8 EGAAVAPGH--PLAKGYLPLP--RGAPVGKESVELQNGPKAG--TFPVNGAPRDSLAAAS 61
+GA P P KG L P +GAP +V PK G T P GAP A
Sbjct: 1261 KGAPTPPAATPPSLKGGLATPPHKGAP--NPAVVTPPSPKGGPATSPPKGAPTPPAATPP 1318
Query: 62 GVLGGPQTP----------LAPEEETQARLLPA-----GAGAETPGAESSPLPLTA 102
G P TP + P LPA G TP ++ P P A
Sbjct: 1319 SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAA 1374
Score = 29.6 bits (65), Expect = 7.6
Identities = 28/104 (26%), Positives = 34/104 (32%), Gaps = 5/104 (4%)
Query: 4 PDDEEGAAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGV 63
P +EG A P L + +P + G A P GAP A
Sbjct: 894 PFPKEGPATPA--PKQAPALSMTSSSPKKARATPAPKGIPASPSP-KGAPTPPAATPPSP 950
Query: 64 LGGPQTPLAPEEETQARLLPAG--AGAETPGAESSPLPLTALSP 105
GGP TP T P G TP + +P P A P
Sbjct: 951 KGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPP 994
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 34.7 bits (78), Expect = 0.24
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 30 PVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQT-----PLAPEEETQARLLPA 84
P KE V Q+ P A + ++AS G P+T P TQ P+
Sbjct: 2025 PPTKEKVSTQDQPMANLCTPSSTANSCSSSASNTPGAPETHPSSSPTPTSSNTQEEAQPS 2084
Query: 85 GAGAETP-----GAESSPLPLTALSPR 106
+P + S P PLT SPR
Sbjct: 2085 SVSDLSPMSMPFASNSEPAPLTLTSPR 2111
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 34.7 bits (78), Expect = 0.24
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 10/87 (11%)
Query: 30 PVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQT-----PLAPEEETQARLLPA 84
P KE V Q+ P A + ++AS G P+T P TQ P+
Sbjct: 2025 PPTKEKVSTQDQPMANLCTPSSTANSCSSSASNTPGAPETHPSSSPTPTSSNTQEEAQPS 2084
Query: 85 GAGAETP-----GAESSPLPLTALSPR 106
+P + S P PLT SPR
Sbjct: 2085 SVSDLSPMSMPFASNSEPAPLTLTSPR 2111
>gi|18699730 solute carrier family 16, member 10 [Homo sapiens]
Length = 515
Score = 34.3 bits (77), Expect = 0.31
Identities = 68/349 (19%), Positives = 132/349 (37%), Gaps = 32/349 (9%)
Query: 149 LSMVYMLAYVPLIFPATWLLDTRGLRLTALLGSGLNCLGAWIKC--GSVQQHLFWVTMLG 206
LSM + P++ T D G R TA++G+ + +G S++ ++
Sbjct: 120 LSMGMIFFCCPIVSVFT---DLFGCRKTAVVGAAVGFVGLMSSSFVSSIEPLYLTYGIIF 176
Query: 207 QCLCSVAQVFILGLPSRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQND 266
C CS A PS + + K + G+ + T + LL VL+ +
Sbjct: 177 ACGCSFAYQ-----PSLVILGHYFKKRLGLVNGIVTAGSSVFTILLPLLLRVLIDSVG-- 229
Query: 267 TNLLACNISTMFYGTSAVATLLFILTAIAFKEKPRYPPSQAQAALQDSPP----EEYSYK 322
+FY + +F+L F +P ++ + + +++S
Sbjct: 230 ----------LFYTLRVLCIFMFVLFLAGFTYRPLATSTKDKESGGSGSSLFSRKKFSPP 279
Query: 323 KSIRN--LFKNIPFVLLLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVA 380
K I N +FK + + + + ++ L + + ++ E+ N + + + V
Sbjct: 280 KKIFNFAIFKVTAYAVWAVGIPLALFGYFVPYVHLMKHVNERFQDEK-NKEVVLMCIGVT 338
Query: 381 GMVGSILCGLWLDYTKTYKQTTLIVYILSFIGMVIFTFTLDLRY---IIIVFVTGGVLGF 437
VG +L G DY K+ L V FIG++ L + I + + G G
Sbjct: 339 SGVGRLLFGRIADYVPGVKKVYLQVLSFFFIGLMSMMIPLCSIFGALIAVCLIMGLFDGC 398
Query: 438 FMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLAQGKLTS 486
F++ P+ FE ++ G G ++ + + L + KL S
Sbjct: 399 FISIMAPIAFELVGAQDVSQAIGFLLGFMSIPMTVGPPIAGLLRDKLGS 447
>gi|4885441 solute carrier family 17 (sodium phosphate), member 4
[Homo sapiens]
Length = 497
Score = 34.3 bits (77), Expect = 0.31
Identities = 46/205 (22%), Positives = 81/205 (39%), Gaps = 30/205 (14%)
Query: 310 ALQDSPPEEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVSTLLNQMILTYYEGEEVN 369
A QD P + IR + K++P +L++Y FY++ I + + +
Sbjct: 273 AQQDCSP---GWSLPIRAMIKSLPLWAILVSYFCEYWLFYTIMAYTPTYISSVLQANLRD 329
Query: 370 AGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIV--------------YILSFIGMVI 415
+G + V G + IL GL D+ + K LI IL + V
Sbjct: 330 SGILSALPFVVGCICIILGGLLADFLLSRKILRLITIRKLFTAIGVLFPSVILVSLPWVR 389
Query: 416 FTFTLDLRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGI 475
+ ++ + ++++ + + F +G L + A P G GLL A I G
Sbjct: 390 SSHSMTMTFLVL---SSAISSFCESGALVNFLDIA-----PRYTGFLKGLLQVFAHIAGA 441
Query: 476 LFTLAQG---KLTSDYGPKAGNIFL 497
+ A G S++G + N+FL
Sbjct: 442 ISPTAAGFFISQDSEFGWR--NVFL 464
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 33.9 bits (76), Expect = 0.40
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 14 PGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAP 73
PGH + G P + E V + GP +G + +PRD+ +AS L GP TPL
Sbjct: 736 PGHLASAG----PLASAESLEPVSWREGP-SGHSTLPRSPRDAPCSASSELSGPSTPLHT 790
Query: 74 EEETQAR 80
Q +
Sbjct: 791 SSPVQGK 797
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 33.9 bits (76), Expect = 0.40
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 14 PGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAP 73
PGH + G P + E V + GP +G + +PRD+ +AS L GP TPL
Sbjct: 860 PGHLASAG----PLASAESLEPVSWREGP-SGHSTLPRSPRDAPCSASSELSGPSTPLHT 914
Query: 74 EEETQAR 80
Q +
Sbjct: 915 SSPVQGK 921
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 33.9 bits (76), Expect = 0.40
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 14 PGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAP 73
PGH + G P + E V + GP +G + +PRD+ +AS L GP TPL
Sbjct: 870 PGHLASAG----PLASAESLEPVSWREGP-SGHSTLPRSPRDAPCSASSELSGPSTPLHT 924
Query: 74 EEETQAR 80
Q +
Sbjct: 925 SSPVQGK 931
>gi|116008152 alpha 1 type XV collagen precursor [Homo sapiens]
Length = 1388
Score = 33.1 bits (74), Expect = 0.68
Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 19/125 (15%)
Query: 4 PDDEEGAAVAPGH-PLAKGYLPLPRGAPVGKESVELQNGPKAGTF---------PVNGAP 53
P + E + VAPG L+ L A VG S + A T +G P
Sbjct: 423 PGEVEASGVAPGELDLSMSAQSLGEEATVGPSSEDSLTTAAAATEVSLSTFEDEEASGVP 482
Query: 54 RDSLAAASGVLG---------GPQTPLAPEEETQARLLPAGAGAETPGAESSPLPLTALS 104
D LA + + G + LA + + G + +P + PLPL ++
Sbjct: 483 TDGLAPLTATMAPERAVTSGPGDEEDLAAATTEEPLITAGGEESGSPPPDGPPLPLPTVA 542
Query: 105 PRRFV 109
P R++
Sbjct: 543 PERWI 547
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 33.1 bits (74), Expect = 0.68
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 13 APGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLA 72
AP LPL GAP + +GP A P + + GGP P A
Sbjct: 254 APSQLPGLAALPLSAGAPAAAIA---GSGPAAPAAFEGAQPLSRPESGASTPGGPAEPSA 310
Query: 73 PEEETQARLLPAGAGAETPGAESSPLPLTALSP 105
P + A A A A P + +S P +A +P
Sbjct: 311 PAAPSAAPAPAAPAPAPAPQSAASSQPQSASTP 343
>gi|71143127 IQ motif and Sec7 domain 3 [Homo sapiens]
Length = 759
Score = 32.7 bits (73), Expect = 0.89
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Query: 13 APGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLA 72
AP P A +G G+E+ E P G + + AAASG G P
Sbjct: 215 APAEPAAG---KAEQGETSGREAPE---APAVGREDASAEDSCAEAAASGAADGATAPKT 268
Query: 73 PEEETQARLLPAGAGAETPGAESSPLPLTALSPR 106
EEE + G GAE + L ++ S +
Sbjct: 269 EEEEEEEETAEVGRGAEAEAGDLEQLSSSSTSTK 302
>gi|169184624 PREDICTED: similar to synaptotagmin XV-b [Homo
sapiens]
Length = 267
Score = 32.0 bits (71), Expect = 1.5
Identities = 35/102 (34%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 8 EGAAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGP 67
EG + P HP A+G P GAP + L G + P +LA A G
Sbjct: 56 EGEWLRPLHPGAEGSQTRPSGAPQFTTLLALAAGSPWRPW----RPGPALAGALRFPGAH 111
Query: 68 QTPLAPEEET----QARLLPAGAGAETPGAESSPLPLTALSP 105
AP Q R AGAG GA S PLP TA P
Sbjct: 112 GRLCAPPPPGLGLGQGR---AGAGLRPRGAGSLPLPCTARLP 150
>gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens]
Length = 434
Score = 32.0 bits (71), Expect = 1.5
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Query: 10 AAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQT 69
A V PG A G L G+ + S +G AG+ P S++A+S GP +
Sbjct: 306 APVPPGAAPANGRLSSSSGSASDRTSSNPFSGRSAGSHP----GTRSVSASS----GPCS 357
Query: 70 PLAPEEETQARLLPAGA--GAETPGAESSPLP 99
P AP R P GA +P A SP P
Sbjct: 358 PAAPHPPPPPRFQPHQGPWGAPSPQAHLSPRP 389
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 31.6 bits (70), Expect = 2.0
Identities = 18/61 (29%), Positives = 22/61 (36%)
Query: 45 GTFPVNGAPRDSLAAASGVLGGPQTPLAPEEETQARLLPAGAGAETPGAESSPLPLTALS 104
G V+G+P + A APE R P G G + PG S PL
Sbjct: 59 GNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAG 118
Query: 105 P 105
P
Sbjct: 119 P 119
Score = 30.4 bits (67), Expect = 4.4
Identities = 32/113 (28%), Positives = 37/113 (32%), Gaps = 12/113 (10%)
Query: 2 ARPDDEEGAAVAPGHPLAKGYLPLPRGAPVGKES--------VELQNGPKAGTFPVNGAP 53
A P AA P P A L P G P G + QNG AG P
Sbjct: 259 AAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPA 318
Query: 54 RDSLAAASGVLGGPQTPLAP----EEETQARLLPAGAGAETPGAESSPLPLTA 102
A SG G AP + E+ R++ A A A S P A
Sbjct: 319 AGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAA 371
>gi|6912666 sialin [Homo sapiens]
Length = 495
Score = 31.6 bits (70), Expect = 2.0
Identities = 58/280 (20%), Positives = 104/280 (37%), Gaps = 34/280 (12%)
Query: 226 SVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGTSAVA 285
S W P E S + + G QLGT + L ++ N + +FY +
Sbjct: 187 SSWAPPLERSKLLSISYAGAQLGTVISLPLSGII---------CYYMNWTYVFYFFGTIG 237
Query: 286 TLLFILTAIAFKEKPR-------YPPSQAQAALQDSPPEEYSYKKSIR--NLFKNIPFVL 336
F+L + P+ Y ++L++ + S +KS+ + K++P
Sbjct: 238 IFWFLLWIWLVSDTPQKHKRISHYEKEYILSSLRN----QLSSQKSVPWVPILKSLPLWA 293
Query: 337 LLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTK 396
+++ + FY++ TLL + G + + + IL G D +
Sbjct: 294 IVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLSSLPYLGSWLCMILSGQAADNLR 353
Query: 397 T-YKQTTLIV-YILSFIGMV---IFTFTLDL----RYIIIVFVTGGVLGFFMTGYLPLGF 447
+ +TL V I S IGM+ +F + + F+T + + G+ GF
Sbjct: 354 AKWNFSTLCVRRIFSLIGMIGPAVFLVAAGFIGCDYSLAVAFLT---ISTTLGGFCSSGF 410
Query: 448 EFAVEITYPESEGTSSGLLNASAQIFGILFTLAQGKLTSD 487
P G G+ N A I G++ + LT D
Sbjct: 411 SINHLDIAPSYAGILLGITNTFATIPGMVGPVIAKSLTPD 450
>gi|62422561 p21-activated kinase 4 isoform 2 [Homo sapiens]
Length = 438
Score = 31.6 bits (70), Expect = 2.0
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 28 GAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAPEEETQARLLPAGAG 87
GAP G+ NGP AG + + S + G P + ++ +L P
Sbjct: 65 GAPKGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQLAPP--- 121
Query: 88 AETPGAESSPLPLTALSPRR 107
A TP A + P P SP+R
Sbjct: 122 ACTPAAPAVPGPPGPRSPQR 141
>gi|62422563 p21-activated kinase 4 isoform 2 [Homo sapiens]
Length = 438
Score = 31.6 bits (70), Expect = 2.0
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 28 GAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAPEEETQARLLPAGAG 87
GAP G+ NGP AG + + S + G P + ++ +L P
Sbjct: 65 GAPKGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSPGVLGPHASEPQLAPP--- 121
Query: 88 AETPGAESSPLPLTALSPRR 107
A TP A + P P SP+R
Sbjct: 122 ACTPAAPAVPGPPGPRSPQR 141
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 31.6 bits (70), Expect = 2.0
Identities = 26/90 (28%), Positives = 29/90 (32%), Gaps = 6/90 (6%)
Query: 11 AVAPGHPLAKGYLPLPRGAPVGKESVELQNG-PKAGTFPVNGAPRDSLAAASGVLGGPQT 69
A P G P P AP G + P A P G+P AS PQ
Sbjct: 182 AQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSP-----TASQAPNQPQA 236
Query: 70 PLAPEEETQARLLPAGAGAETPGAESSPLP 99
P AP T + PA P P P
Sbjct: 237 PTAPVPHTHIQQAPALHPQRPPSPHPPPHP 266
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 31.6 bits (70), Expect = 2.0
Identities = 26/90 (28%), Positives = 29/90 (32%), Gaps = 6/90 (6%)
Query: 11 AVAPGHPLAKGYLPLPRGAPVGKESVELQNG-PKAGTFPVNGAPRDSLAAASGVLGGPQT 69
A P G P P AP G + P A P G+P AS PQ
Sbjct: 736 AQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSP-----TASQAPNQPQA 790
Query: 70 PLAPEEETQARLLPAGAGAETPGAESSPLP 99
P AP T + PA P P P
Sbjct: 791 PTAPVPHTHIQQAPALHPQRPPSPHPPPHP 820
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 31.6 bits (70), Expect = 2.0
Identities = 26/90 (28%), Positives = 29/90 (32%), Gaps = 6/90 (6%)
Query: 11 AVAPGHPLAKGYLPLPRGAPVGKESVELQNG-PKAGTFPVNGAPRDSLAAASGVLGGPQT 69
A P G P P AP G + P A P G+P AS PQ
Sbjct: 736 AQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSP-----TASQAPNQPQA 790
Query: 70 PLAPEEETQARLLPAGAGAETPGAESSPLP 99
P AP T + PA P P P
Sbjct: 791 PTAPVPHTHIQQAPALHPQRPPSPHPPPHP 820
>gi|169210256 PREDICTED: hypothetical protein [Homo sapiens]
Length = 447
Score = 31.2 bits (69), Expect = 2.6
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 16/91 (17%)
Query: 13 APGHPLAKGYLPLPRGAPVGKESVELQ----NGPKAGTFPVNGAPRDSLAAASGVLGGPQ 68
APG P G PR AP +E + + + +AG V G AAA G G
Sbjct: 293 APGEPAEPGRARAPRSAPSSREPRQTKRRVGSRARAGAGAVTG---PCPAAAQGARGSWP 349
Query: 69 TPLAPEEETQARLLPAGAGAETPGAESSPLP 99
+P R LP+ GA S+P P
Sbjct: 350 SP---------RCLPSDGGAREAPPTSAPHP 371
>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
Length = 4374
Score = 31.2 bits (69), Expect = 2.6
Identities = 37/119 (31%), Positives = 49/119 (41%), Gaps = 17/119 (14%)
Query: 2 ARPDDEEGAAVAPGHPLAKGYLPLPRGAPVG-KESVEL-------QNGPKAGTFPVNGAP 53
++ +D ++ G P+ Y P ES E Q P T P G
Sbjct: 2724 SKSNDSTEQNLSDGTPMPDSYPTTPSSTDAATSESKETLGTLQSSQQQPTLPTPPALGEV 2783
Query: 54 RDSLAAASGVLGGPQT----PLAPEEETQARLLPAGAGAETPGAESSPLP-LTALSPRR 107
L + +G GG T P+ PEE R P+G AET E SP P +T+LSP R
Sbjct: 2784 PQELQSPAGE-GGSSTQLLMPVEPEELGPTR--PSGE-AETTQMELSPAPTITSLSPER 2838
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,294,511
Number of Sequences: 37866
Number of extensions: 1014481
Number of successful extensions: 3742
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 3680
Number of HSP's gapped (non-prelim): 103
length of query: 555
length of database: 18,247,518
effective HSP length: 107
effective length of query: 448
effective length of database: 14,195,856
effective search space: 6359743488
effective search space used: 6359743488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.