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Search of human proteins with 75677394
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75677394 transcription factor 23 [Homo sapiens]
(214 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75677394 transcription factor 23 [Homo sapiens] 432 e-122
gi|239754900 PREDICTED: similar to transcription factor 23 [Homo... 131 4e-31
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo... 130 8e-31
gi|239743573 PREDICTED: similar to transcription factor 23 [Homo... 130 8e-31
gi|38202237 transcription factor 21 [Homo sapiens] 68 5e-12
gi|38202239 transcription factor 21 [Homo sapiens] 68 5e-12
gi|116805332 musculin [Homo sapiens] 66 3e-11
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 57 9e-09
gi|148922889 scleraxis homolog B [Homo sapiens] 55 4e-08
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 55 4e-08
gi|186972126 scleraxis homolog A [Homo sapiens] 55 4e-08
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 52 3e-07
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 51 6e-07
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 51 6e-07
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 51 6e-07
gi|68989258 neurogenin 3 [Homo sapiens] 50 1e-06
gi|17981708 twist homolog 2 [Homo sapiens] 49 2e-06
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 49 4e-06
gi|38455396 neurogenin 1 [Homo sapiens] 48 7e-06
gi|14149724 mesoderm posterior 1 [Homo sapiens] 48 7e-06
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 46 3e-05
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 44 8e-05
gi|226498192 atonal homolog 8 [Homo sapiens] 44 1e-04
gi|4507741 twist [Homo sapiens] 44 1e-04
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 44 1e-04
gi|31077092 neurogenin 2 [Homo sapiens] 44 1e-04
gi|21553337 atonal homolog 7 [Homo sapiens] 44 1e-04
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens] 43 2e-04
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 42 3e-04
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 41 7e-04
>gi|75677394 transcription factor 23 [Homo sapiens]
Length = 214
Score = 432 bits (1112), Expect = e-122
Identities = 214/214 (100%), Positives = 214/214 (100%)
Query: 1 MSQRKARGPPAMPGVGHSQTQAKARLLPGADRKRSRLSRTRQDPWEERSWSNQRWSRATP 60
MSQRKARGPPAMPGVGHSQTQAKARLLPGADRKRSRLSRTRQDPWEERSWSNQRWSRATP
Sbjct: 1 MSQRKARGPPAMPGVGHSQTQAKARLLPGADRKRSRLSRTRQDPWEERSWSNQRWSRATP 60
Query: 61 GPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVL 120
GPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVL
Sbjct: 61 GPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVL 120
Query: 121 AASYIAHLTRTLGHELPGPAWPPFLRGLRYLHPLKKWPMRSRLYAGGLGYSDLDSTTAST 180
AASYIAHLTRTLGHELPGPAWPPFLRGLRYLHPLKKWPMRSRLYAGGLGYSDLDSTTAST
Sbjct: 121 AASYIAHLTRTLGHELPGPAWPPFLRGLRYLHPLKKWPMRSRLYAGGLGYSDLDSTTAST 180
Query: 181 PSQRTRDAEVGSQVPGEADALLSTTPLSPALGDK 214
PSQRTRDAEVGSQVPGEADALLSTTPLSPALGDK
Sbjct: 181 PSQRTRDAEVGSQVPGEADALLSTTPLSPALGDK 214
>gi|239754900 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 131 bits (330), Expect = 4e-31
Identities = 73/118 (61%), Positives = 81/118 (68%), Gaps = 3/118 (2%)
Query: 54 RWSRATPGPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLS 113
R R PGP G GG G + ENAARERSRV+TLR AFL +Q LP+VPPDTKLS
Sbjct: 28 RPGRTGPGPAGL-GGGSCSGSGRPAAENAARERSRVQTLRHAFLEVQRTLPSVPPDTKLS 86
Query: 114 KLDVLVLAASYIAHLTRTL--GHELPGPAWPPFLRGLRYLHPLKKWPMRSRLYAGGLG 169
KLDVL+LA +YIAHLTR+L E P A LRG YLHP+KKWPMRSRLY G G
Sbjct: 87 KLDVLLLATTYIAHLTRSLQDDAEAPADAGLGALRGDGYLHPVKKWPMRSRLYIGATG 144
>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 130 bits (327), Expect = 8e-31
Identities = 73/120 (60%), Positives = 81/120 (67%), Gaps = 3/120 (2%)
Query: 52 NQRWSRATPGPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTK 111
+ R R PGP G GG G + NAARERSRV+TLR AFL LQ LP+VPPDTK
Sbjct: 26 DSRPGRTGPGPAGP-GGGSRSGSGRPAAANAARERSRVQTLRHAFLELQRTLPSVPPDTK 84
Query: 112 LSKLDVLVLAASYIAHLTRTL--GHELPGPAWPPFLRGLRYLHPLKKWPMRSRLYAGGLG 169
LSKLDVL+LA +YIAHLTR+L E P A LRG YLHP+KKWPMRSRLY G G
Sbjct: 85 LSKLDVLLLATTYIAHLTRSLQDDAEAPADAGLGALRGDGYLHPVKKWPMRSRLYIGATG 144
>gi|239743573 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 130 bits (327), Expect = 8e-31
Identities = 73/120 (60%), Positives = 81/120 (67%), Gaps = 3/120 (2%)
Query: 52 NQRWSRATPGPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTK 111
+ R R PGP G GG G + NAARERSRV+TLR AFL LQ LP+VPPDTK
Sbjct: 26 DSRPGRTGPGPAGP-GGGSRSGSGRPAAANAARERSRVQTLRHAFLELQRTLPSVPPDTK 84
Query: 112 LSKLDVLVLAASYIAHLTRTL--GHELPGPAWPPFLRGLRYLHPLKKWPMRSRLYAGGLG 169
LSKLDVL+LA +YIAHLTR+L E P A LRG YLHP+KKWPMRSRLY G G
Sbjct: 85 LSKLDVLLLATTYIAHLTRSLQDDAEAPADAGLGALRGDGYLHPVKKWPMRSRLYIGATG 144
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 68.2 bits (165), Expect = 5e-12
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 57 RATPGPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLD 116
R P + +G G+ ARER+R+R L +AF L+ LP VPPDTKLSKLD
Sbjct: 60 RKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLD 119
Query: 117 VLVLAASYIAHLTRTLGHELPGPAWPPFLRGLRYLHPLK-KWP 158
L LA+SYIAHL + L ++ + G Y+HP+ WP
Sbjct: 120 TLRLASSYIAHLRQILAND-------KYENG--YIHPVNLTWP 153
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 68.2 bits (165), Expect = 5e-12
Identities = 43/103 (41%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 57 RATPGPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLD 116
R P + +G G+ ARER+R+R L +AF L+ LP VPPDTKLSKLD
Sbjct: 60 RKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLD 119
Query: 117 VLVLAASYIAHLTRTLGHELPGPAWPPFLRGLRYLHPLK-KWP 158
L LA+SYIAHL + L ++ + G Y+HP+ WP
Sbjct: 120 TLRLASSYIAHLRQILAND-------KYENG--YIHPVNLTWP 153
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 65.9 bits (159), Expect = 3e-11
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 10/77 (12%)
Query: 83 ARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTLGHELPGPAWP 142
ARER+R+R L +AF L+ +LP VPPDTKLSKLD L LA+SYIAHL + L +
Sbjct: 114 ARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQED------- 166
Query: 143 PFLRGLRYLHPLK-KWP 158
+ G Y+HP+ WP
Sbjct: 167 RYENG--YVHPVNLTWP 181
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 57.4 bits (137), Expect = 9e-09
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 56 SRATPGPRGTRAGGLALGRSEASPENA--------ARERSRVRTLRQAFLALQAALPAVP 107
+R PGP G R G G A P ARER R +++ AF AL+ +P P
Sbjct: 47 ARRGPGPGGGRRAG---GGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEP 103
Query: 108 PDTKLSKLDVLVLAASYIAHLTRTL 132
D KLSK++ L LA+SYIAHL L
Sbjct: 104 VDRKLSKIETLRLASSYIAHLANVL 128
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 55.1 bits (131), Expect = 4e-08
Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 29 GADRKRSRLSRTRQDPWEERSWSNQRWSRATPGPRGTRAGGLALGRSEASPENAARERSR 88
G+D K R+ R R + R RA G G R G R A+ ARER R
Sbjct: 34 GSDEKPCRVHAARCGLQGARRRAGGR--RAGGGGPGGRPGREPRQRHTAN----ARERDR 87
Query: 89 VRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTL------GHELPGPAWP 142
++ AF AL+ +P P D KLSK++ L LA+SYI+HL L G P + P
Sbjct: 88 TNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACGDGQPCHSGP 147
Query: 143 PFLRGLR 149
F R
Sbjct: 148 AFFHAAR 154
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 55.1 bits (131), Expect = 4e-08
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Query: 57 RATPGPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLD 116
R PGP G GG + E+ RER R+ L AF AL+ +P V D KLSK++
Sbjct: 58 RRRPGPSGP--GGRRDSSIQRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIE 115
Query: 117 VLVLAASYIAHLTRTL---------GHELPGP 139
L LA +YI LT T+ G E PGP
Sbjct: 116 TLTLAKNYIKSLTATILTMSSSRLPGLEGPGP 147
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 55.1 bits (131), Expect = 4e-08
Identities = 45/127 (35%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 29 GADRKRSRLSRTRQDPWEERSWSNQRWSRATPGPRGTRAGGLALGRSEASPENAARERSR 88
G+D K R+ R R + R RA G G R G R A+ ARER R
Sbjct: 34 GSDEKPCRVHAARCGLQGARRRAGGR--RAGGGGPGGRPGREPRQRHTAN----ARERDR 87
Query: 89 VRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTL------GHELPGPAWP 142
++ AF AL+ +P P D KLSK++ L LA+SYI+HL L G P + P
Sbjct: 88 TNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVLLAGEACGDGQPCHSGP 147
Query: 143 PFLRGLR 149
F R
Sbjct: 148 AFFHAAR 154
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 52.4 bits (124), Expect = 3e-07
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 58 ATPG--PRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKL 115
A PG P A G LGR + S +ER R ++ AF L+ +P VP DTKLSK+
Sbjct: 76 ARPGQSPGRLEALGGRLGRRKGS--GPKKERRRTESINSAFAELRECIPNVPADTKLSKI 133
Query: 116 DVLVLAASYIAHLTRTLGHE 135
L LA SYIA+L L +
Sbjct: 134 KTLRLATSYIAYLMDVLAKD 153
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 51.2 bits (121), Expect = 6e-07
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 81 NAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTL 132
+A RER RV AF L+ LP +PPD KLSK+++L LA YI++L L
Sbjct: 82 HATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 51.2 bits (121), Expect = 6e-07
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 81 NAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTL 132
+A RER RV AF L+ LP +PPD KLSK+++L LA YI++L L
Sbjct: 82 HATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 51.2 bits (121), Expect = 6e-07
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 81 NAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTL 132
+A RER RV AF L+ LP +PPD KLSK+++L LA YI++L L
Sbjct: 80 HATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 131
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 50.4 bits (119), Expect = 1e-06
Identities = 32/78 (41%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 57 RATPGPRGTRAGGLALGRSEASPENAA--RERSRVRTLRQAFLALQAALPAVPPDTKLSK 114
RA G R LAL + S A RER+R+ L A AL+ LP P D KL+K
Sbjct: 62 RARRGGRSRPKSELALSKQRRSRRKKANDRERNRMHNLNSALDALRGVLPTFPDDAKLTK 121
Query: 115 LDVLVLAASYIAHLTRTL 132
++ L A +YI LT+TL
Sbjct: 122 IETLRFAHNYIWALTQTL 139
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 49.3 bits (116), Expect = 2e-06
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 59 TPGPRGTRAGGLALGRSEASPENA---ARERSRVRTLRQAFLALQAALPAVPPDTKLSKL 115
TPG RG + A E + RER R ++L +AF AL+ +P +P D KLSK+
Sbjct: 46 TPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKI 104
Query: 116 DVLVLAASYIAHLTRTL 132
L LAA YI L + L
Sbjct: 105 QTLKLAARYIDFLYQVL 121
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 48.5 bits (114), Expect = 4e-06
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 84 RERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTLGHE 135
+ER R +++ AF L+ +P VP DTKLSK+ L LA SYIA+L L +
Sbjct: 107 KERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKD 158
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 47.8 bits (112), Expect = 7e-06
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 23/129 (17%)
Query: 6 ARGPPAMPGVGHSQTQAKARLLPGADRKRSRLSRTRQDPWEERSWSNQRWSRATPGPRGT 65
A GPPA P + ++A +PGA QD +ER R G
Sbjct: 41 ASGPPA-PARRGAPNISRASEVPGA-----------QDDEQER--------RRRRGRTRV 80
Query: 66 RAGGL--ALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAAS 123
R+ L +L RS N RER+R+ L A AL++ LP+ P DTKL+K++ L A +
Sbjct: 81 RSEALLHSLRRSRRVKAND-RERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYN 139
Query: 124 YIAHLTRTL 132
YI L TL
Sbjct: 140 YIWALAETL 148
>gi|14149724 mesoderm posterior 1 [Homo sapiens]
Length = 268
Score = 47.8 bits (112), Expect = 7e-06
Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 16/138 (11%)
Query: 9 PPAMPGVGHSQTQAKARLLPGADRKRSRLSRTRQDPWEERSWSNQRWSRATPGP------ 62
PP S R P +D+ R + D W + S A PG
Sbjct: 7 PPLSESWMLSAAWGPTRRPPPSDKDCGRSLVSSPDSWGSTPADSPVASPARPGTLRDPRA 66
Query: 63 -----RGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALP--AVPPDTKLSKL 115
RG R+ L G+ +++ E RE+ R+RTL +A L+ LP P L+K+
Sbjct: 67 PSVGRRGARSSRLGSGQRQSASE---REKLRMRTLARALHELRRFLPPSVAPAGQSLTKI 123
Query: 116 DVLVLAASYIAHLTRTLG 133
+ L LA YI HL+ LG
Sbjct: 124 ETLRLAIRYIGHLSAVLG 141
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 45.8 bits (107), Expect = 3e-05
Identities = 31/73 (42%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 83 ARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTL---------G 133
+RER R + + AF L+ LP PPD KLSK +VL LA YI L R L G
Sbjct: 157 SRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQAAALAAG 216
Query: 134 HELPGPAWPPFLR 146
PGP P R
Sbjct: 217 PTPPGPRKRPVHR 229
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 44.3 bits (103), Expect = 8e-05
Identities = 23/52 (44%), Positives = 30/52 (57%)
Query: 84 RERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTLGHE 135
RER R + + AF L+ +P PPD KLSK + L LA YI L + LG +
Sbjct: 10 RERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQ 61
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 43.9 bits (102), Expect = 1e-04
Identities = 40/123 (32%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 9 PPAMPGVGHSQTQAKARLLPGADRKRSRLSRTRQDPWEERSWSNQRWSRATPGPRGTRAG 68
PPA P S + PG + S +S + ++ S S R PG +
Sbjct: 168 PPAPPAPPESTVRPAPPTRPG-ESSYSSISHVIYNNHQDSSAS----PRKRPGEATAASS 222
Query: 69 GL-ALGRSEASPENAARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAH 127
+ AL ++ NA RER+RV T+ AF AL+ +P KLSKL +L +A +YI
Sbjct: 223 EIKALQQTRRLLANA-RERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILS 281
Query: 128 LTR 130
L R
Sbjct: 282 LAR 284
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 43.9 bits (102), Expect = 1e-04
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 84 RERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTL 132
RER R ++L +AF AL+ +P +P D KLSK+ L LAA YI L + L
Sbjct: 116 RERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVL 163
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 43.9 bits (102), Expect = 1e-04
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 84 RERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTLGHELP 137
RER R++++ AF L++ +P +P + +LSK+D L LA YI L+ + +LP
Sbjct: 171 RERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQADLP 224
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 43.9 bits (102), Expect = 1e-04
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 84 RERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTL 132
RER+R+ L A AL+ LP P D KL+K++ L A +YI LT TL
Sbjct: 120 RERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETL 168
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 43.5 bits (101), Expect = 1e-04
Identities = 32/81 (39%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 58 ATPGPRGTRAGGLALG--RSEASPENA----ARERSRVRTLRQAFLALQAALPAVPPDTK 111
A P GT G G R E++ ARER R++ L AF L+ +P D K
Sbjct: 16 APPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKK 75
Query: 112 LSKLDVLVLAASYIAHLTRTL 132
LSK + L +A SYI LTR L
Sbjct: 76 LSKYETLQMALSYIMALTRIL 96
>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
Length = 397
Score = 43.1 bits (100), Expect = 2e-04
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 49 SWSNQRWSRATPGPRGTRAGGLALGRSEASPENAARERSRVRTLRQAFLALQAALPA--V 106
S S++ A PR R G R AS RE+ R+RTL +A L+ LP
Sbjct: 58 SCSSRAAEAAATTPRRARTGPAGGQRQSASE----REKLRMRTLARALHELRRFLPPSLA 113
Query: 107 PPDTKLSKLDVLVLAASYIAHLTRTLG 133
P L+K++ L LA YI HL+ LG
Sbjct: 114 PAGQSLTKIETLRLAIRYIGHLSAVLG 140
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 42.4 bits (98), Expect = 3e-04
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 83 ARERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTLGHE 135
+RER R + + AF L+ +P PPD KLSK ++L LA YI L + L +
Sbjct: 194 SRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQ 246
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 41.2 bits (95), Expect = 7e-04
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 84 RERSRVRTLRQAFLALQAALPAVPPDTKLSKLDVLVLAASYIAHLTRTLGHELPGPAWPP 143
RER RV+ + + + L+ LP + +LSK++ L A YI +L L P + PP
Sbjct: 198 RERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLS-SAPDGSTPP 256
Query: 144 FLRGLRYLHPLKKWPMRSRLYAGGLGYSDLDSTTASTPSQ 183
RGL P P R G G + S+ S+
Sbjct: 257 ASRGLPGTGPCPAPPATPRPDRPGDGEARAPSSLVPESSE 296
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,464,299
Number of Sequences: 37866
Number of extensions: 440227
Number of successful extensions: 1993
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 75
Number of HSP's that attempted gapping in prelim test: 1896
Number of HSP's gapped (non-prelim): 163
length of query: 214
length of database: 18,247,518
effective HSP length: 98
effective length of query: 116
effective length of database: 14,536,650
effective search space: 1686251400
effective search space used: 1686251400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.