Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 74229008
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|74229008 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1c [Homo sapiens]
(595 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|74229008 core-binding factor, runt domain, alpha subunit 2; t... 1218 0.0
gi|4826663 core-binding factor, runt domain, alpha subunit 2; tr... 1197 0.0
gi|89353295 core-binding factor, runt domain, alpha subunit 2; t... 1179 0.0
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 755 0.0
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 755 0.0
gi|28329416 acute myelogenous leukemia 1 translocation 1 protein... 755 0.0
gi|4757916 acute myelogenous leukemia 1 translocation 1 protein ... 755 0.0
gi|28872805 myeloid translocation gene on chromosome 16 isoform ... 689 0.0
gi|28872803 myeloid translocation gene on chromosome 16 isoform ... 677 0.0
gi|38016945 deformed epidermal autoregulatory factor 1 [Homo sap... 68 2e-11
gi|239749940 PREDICTED: similar to deformed epidermal autoregula... 68 2e-11
gi|110832843 TBP-associated factor 4 [Homo sapiens] 49 1e-05
gi|148792970 TAF4b RNA polymerase II, TATA box binding protein (... 48 2e-05
gi|31652264 RNA binding motif protein 26 [Homo sapiens] 45 2e-04
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 44 4e-04
gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo sa... 44 4e-04
gi|19923997 zinc finger, MYND domain containing 19 [Homo sapiens] 43 7e-04
gi|148612857 sickle tail isoform 3 [Homo sapiens] 42 0.002
gi|148612813 sickle tail isoform 2 [Homo sapiens] 42 0.002
gi|50843820 sickle tail isoform 1 [Homo sapiens] 42 0.002
gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens] 41 0.004
gi|38505161 tudor domain containing 1 [Homo sapiens] 40 0.005
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 40 0.005
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 40 0.005
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 40 0.005
gi|157168329 formin 1 [Homo sapiens] 40 0.006
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 40 0.008
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.010
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 39 0.010
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 39 0.010
>gi|74229008 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1c [Homo sapiens]
Length = 595
Score = 1218 bits (3152), Expect = 0.0
Identities = 595/595 (100%), Positives = 595/595 (100%)
Query: 1 MVGVPGAAAFQLGPEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTAL 60
MVGVPGAAAFQLGPEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTAL
Sbjct: 1 MVGVPGAAAFQLGPEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTAL 60
Query: 61 SNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQF 120
SNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQF
Sbjct: 61 SNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQF 120
Query: 121 GNDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQREL 180
GNDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQREL
Sbjct: 121 GNDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQREL 180
Query: 181 LHCARAAKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRD 240
LHCARAAKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRD
Sbjct: 181 LHCARAAKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRD 240
Query: 241 TIAPEPPAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPN 300
TIAPEPPAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPN
Sbjct: 241 TIAPEPPAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPN 300
Query: 301 KMLEHREVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSM 360
KMLEHREVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSM
Sbjct: 301 KMLEHREVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSM 360
Query: 361 AVLRRCQESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPG 420
AVLRRCQESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPG
Sbjct: 361 AVLRRCQESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPG 420
Query: 421 TGYVPVEFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQA 480
TGYVPVEFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQA
Sbjct: 421 TGYVPVEFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQA 480
Query: 481 AEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHG 540
AEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHG
Sbjct: 481 AEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHG 540
Query: 541 QSPHGQGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 595
QSPHGQGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL
Sbjct: 541 QSPHGQGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 595
>gi|4826663 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1b [Homo sapiens]
Length = 604
Score = 1197 bits (3098), Expect = 0.0
Identities = 584/589 (99%), Positives = 587/589 (99%)
Query: 7 AAAFQLGPEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINH 66
A +++GPEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINH
Sbjct: 16 ARQWKVGPEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINH 75
Query: 67 SPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISP 126
SPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISP
Sbjct: 76 SPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISP 135
Query: 127 EIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARA 186
EIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARA
Sbjct: 136 EIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARA 195
Query: 187 AKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEP 246
AKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEP
Sbjct: 196 AKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEP 255
Query: 247 PAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHR 306
PAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHR
Sbjct: 256 PAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHR 315
Query: 307 EVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRC 366
EVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRC
Sbjct: 316 EVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRC 375
Query: 367 QESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPV 426
QESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPV
Sbjct: 376 QESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPV 435
Query: 427 EFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFL 486
EFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFL
Sbjct: 436 EFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFL 495
Query: 487 VINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQ 546
VINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQ
Sbjct: 496 VINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQ 555
Query: 547 GRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 595
GRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL
Sbjct: 556 GRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 604
>gi|89353295 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1a [Homo sapiens]
Length = 575
Score = 1179 bits (3050), Expect = 0.0
Identities = 575/575 (100%), Positives = 575/575 (100%)
Query: 21 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 80
MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR
Sbjct: 1 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 60
Query: 81 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 140
FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV
Sbjct: 61 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 120
Query: 141 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 200
NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH
Sbjct: 121 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 180
Query: 201 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 260
LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH
Sbjct: 181 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 240
Query: 261 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 320
SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG
Sbjct: 241 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 300
Query: 321 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 380
YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR
Sbjct: 301 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 360
Query: 381 YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK 440
YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK
Sbjct: 361 YNENTELRKTGTELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNKVK 420
Query: 441 IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN 500
IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN
Sbjct: 421 IQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENCWN 480
Query: 501 CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR 560
CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR
Sbjct: 481 CGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSSAR 540
Query: 561 SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 595
SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL
Sbjct: 541 SADCSVPSPALDKTSATTSRSSTPASVTAIDTNGL 575
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 755 bits (1949), Expect = 0.0
Identities = 375/574 (65%), Positives = 450/574 (78%), Gaps = 12/574 (2%)
Query: 21 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 80
MP SPV+VK QSR +PPTMPP PP G PR SFTPT L+NG +HSP LNGAPSPP
Sbjct: 1 MPDSPVDVKTQSRLTPPTMPP-PPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNG 59
Query: 81 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 140
FSNGP+SS+SS+L NQQLP CGARQLSKLKRFLTTLQQFGNDISPEIGE+VRTLVL LV
Sbjct: 60 FSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLV 119
Query: 141 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 200
NST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQ P+QYLAQHE
Sbjct: 120 NSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 179
Query: 201 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 260
LLL+ S SP DSSELL++V+ NGKR +P+R +EN FDR+ + E P+KR CTISP R+
Sbjct: 180 LLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRY 239
Query: 261 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 320
SP + P G HPTPPP QHY L+D+A +H YR+ + HR++RDR+ +GL+G
Sbjct: 240 SPNNGLS-YQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 298
Query: 321 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 380
Q+E++DHRLT+REWA+EWKHLDH LNCIM+MVEKTRRS+ VLRRCQE+DREELNYW RR
Sbjct: 299 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 358
Query: 381 YNENTELRKTG--TELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 438
Y++ +L+K G + SRQ SP + D ++ D+ REF RP +GYVP E WKK EEAVN+
Sbjct: 359 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 418
Query: 439 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 498
VK QAM+E+QKAV+EAE+KA ++I TERA+ME+T+A+ KRQAAEDA VIN+QE+S+E+C
Sbjct: 419 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 478
Query: 499 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSS 558
WNCGRKASETCSGCN ARYCGSFCQHKDWE+HH +CGQ L Q QG SS
Sbjct: 479 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQ---QG----DTPAVSS 531
Query: 559 ARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 592
+ + + SP +D A T RS+TP + + I+T
Sbjct: 532 SVTPNSGAGSP-MDTPPAATPRSTTPGTPSTIET 564
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 755 bits (1949), Expect = 0.0
Identities = 375/574 (65%), Positives = 450/574 (78%), Gaps = 12/574 (2%)
Query: 21 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 80
MP SPV+VK QSR +PPTMPP PP G PR SFTPT L+NG +HSP LNGAPSPP
Sbjct: 1 MPDSPVDVKTQSRLTPPTMPP-PPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNG 59
Query: 81 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 140
FSNGP+SS+SS+L NQQLP CGARQLSKLKRFLTTLQQFGNDISPEIGE+VRTLVL LV
Sbjct: 60 FSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLV 119
Query: 141 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 200
NST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQ P+QYLAQHE
Sbjct: 120 NSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 179
Query: 201 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 260
LLL+ S SP DSSELL++V+ NGKR +P+R +EN FDR+ + E P+KR CTISP R+
Sbjct: 180 LLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRY 239
Query: 261 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 320
SP + P G HPTPPP QHY L+D+A +H YR+ + HR++RDR+ +GL+G
Sbjct: 240 SPNNGLS-YQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 298
Query: 321 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 380
Q+E++DHRLT+REWA+EWKHLDH LNCIM+MVEKTRRS+ VLRRCQE+DREELNYW RR
Sbjct: 299 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 358
Query: 381 YNENTELRKTG--TELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 438
Y++ +L+K G + SRQ SP + D ++ D+ REF RP +GYVP E WKK EEAVN+
Sbjct: 359 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 418
Query: 439 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 498
VK QAM+E+QKAV+EAE+KA ++I TERA+ME+T+A+ KRQAAEDA VIN+QE+S+E+C
Sbjct: 419 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 478
Query: 499 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSS 558
WNCGRKASETCSGCN ARYCGSFCQHKDWE+HH +CGQ L Q QG SS
Sbjct: 479 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQ---QG----DTPAVSS 531
Query: 559 ARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 592
+ + + SP +D A T RS+TP + + I+T
Sbjct: 532 SVTPNSGAGSP-MDTPPAATPRSTTPGTPSTIET 564
>gi|28329416 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8b [Homo sapiens]
Length = 604
Score = 755 bits (1949), Expect = 0.0
Identities = 375/574 (65%), Positives = 450/574 (78%), Gaps = 12/574 (2%)
Query: 21 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 80
MP SPV+VK QSR +PPTMPP PP G PR SFTPT L+NG +HSP LNGAPSPP
Sbjct: 38 MPDSPVDVKTQSRLTPPTMPP-PPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNG 96
Query: 81 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 140
FSNGP+SS+SS+L NQQLP CGARQLSKLKRFLTTLQQFGNDISPEIGE+VRTLVL LV
Sbjct: 97 FSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLV 156
Query: 141 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 200
NST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQ P+QYLAQHE
Sbjct: 157 NSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 216
Query: 201 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 260
LLL+ S SP DSSELL++V+ NGKR +P+R +EN FDR+ + E P+KR CTISP R+
Sbjct: 217 LLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRY 276
Query: 261 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 320
SP + P G HPTPPP QHY L+D+A +H YR+ + HR++RDR+ +GL+G
Sbjct: 277 SPNNGLS-YQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 335
Query: 321 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 380
Q+E++DHRLT+REWA+EWKHLDH LNCIM+MVEKTRRS+ VLRRCQE+DREELNYW RR
Sbjct: 336 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 395
Query: 381 YNENTELRKTG--TELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 438
Y++ +L+K G + SRQ SP + D ++ D+ REF RP +GYVP E WKK EEAVN+
Sbjct: 396 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 455
Query: 439 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 498
VK QAM+E+QKAV+EAE+KA ++I TERA+ME+T+A+ KRQAAEDA VIN+QE+S+E+C
Sbjct: 456 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 515
Query: 499 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSS 558
WNCGRKASETCSGCN ARYCGSFCQHKDWE+HH +CGQ L Q QG SS
Sbjct: 516 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQ---QG----DTPAVSS 568
Query: 559 ARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 592
+ + + SP +D A T RS+TP + + I+T
Sbjct: 569 SVTPNSGAGSP-MDTPPAATPRSTTPGTPSTIET 601
>gi|4757916 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8a [Homo sapiens]
Length = 577
Score = 755 bits (1949), Expect = 0.0
Identities = 375/574 (65%), Positives = 450/574 (78%), Gaps = 12/574 (2%)
Query: 21 MPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQR 80
MP SPV+VK QSR +PPTMPP PP G PR SFTPT L+NG +HSP LNGAPSPP
Sbjct: 11 MPDSPVDVKTQSRLTPPTMPP-PPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNG 69
Query: 81 FSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLALV 140
FSNGP+SS+SS+L NQQLP CGARQLSKLKRFLTTLQQFGNDISPEIGE+VRTLVL LV
Sbjct: 70 FSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLV 129
Query: 141 NSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHEH 200
NST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQ P+QYLAQHE
Sbjct: 130 NSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQ 189
Query: 201 LLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPRH 260
LLL+ S SP DSSELL++V+ NGKR +P+R +EN FDR+ + E P+KR CTISP R+
Sbjct: 190 LLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRY 249
Query: 261 SPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNGG 320
SP + P G HPTPPP QHY L+D+A +H YR+ + HR++RDR+ +GL+G
Sbjct: 250 SPNNGLS-YQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGT 308
Query: 321 YQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKRR 380
Q+E++DHRLT+REWA+EWKHLDH LNCIM+MVEKTRRS+ VLRRCQE+DREELNYW RR
Sbjct: 309 RQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWIRR 368
Query: 381 YNENTELRKTG--TELVSRQHSPGSADSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 438
Y++ +L+K G + SRQ SP + D ++ D+ REF RP +GYVP E WKK EEAVN+
Sbjct: 369 YSDAEDLKKGGGSSSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNE 428
Query: 439 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 498
VK QAM+E+QKAV+EAE+KA ++I TERA+ME+T+A+ KRQAAEDA VIN+QE+S+E+C
Sbjct: 429 VKRQAMTELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDALAVINQQEDSSESC 488
Query: 499 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPVGRGSS 558
WNCGRKASETCSGCN ARYCGSFCQHKDWE+HH +CGQ L Q QG SS
Sbjct: 489 WNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQ---QG----DTPAVSS 541
Query: 559 ARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 592
+ + + SP +D A T RS+TP + + I+T
Sbjct: 542 SVTPNSGAGSP-MDTPPAATPRSTTPGTPSTIET 574
>gi|28872805 myeloid translocation gene on chromosome 16 isoform
MTG16b [Homo sapiens]
Length = 567
Score = 689 bits (1777), Expect = 0.0
Identities = 353/587 (60%), Positives = 433/587 (73%), Gaps = 38/587 (6%)
Query: 21 MPGSPVEVKIQSRSSPPTMPPLPPI-NPGGPRPVSFTPTALSNGINHSPPTLNGAPSPPQ 79
MP SP EVK Q RS+PP+MPP PP + G RP SFTP L NG +HSP +NGAP P
Sbjct: 1 MPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTLMNGSSHSPTAINGAPCTPN 60
Query: 80 RFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGNDISPEIGEKVRTLVLAL 139
FSNGPA+S++++L+ Q LP CGARQLSKLKRFLTTLQQFG+DISPEIGE+VRTLVL L
Sbjct: 61 GFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGL 120
Query: 140 VNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQYLAQHE 199
VNST+TIEEFH KLQEATNFPLRPFVIPFLKANLPLLQRELLHCAR AKQTP+QYLAQHE
Sbjct: 121 VNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHE 180
Query: 200 HLLLNTSIASPADSSELLMEVHGNGKRPSPERREENSFDRDTIAPEPPAKRVCTISPAPR 259
LLL+ S +SP DSSELL+EV+ NGKR +P+R +EN DRD + PE +KR CT++PA R
Sbjct: 181 QLLLDASASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPEHLSKRPCTLNPAQR 240
Query: 260 HSPALTVPLMNPGGQFHPTPPPLQHYTLEDIATSHLYREPNKMLEHREVRDRHHSLGLNG 319
+SP+ G PTPPP HY LEDIA +H +R+ + + RE+R+RH L + G
Sbjct: 241 YSPS--------NGPPQPTPPP--HYRLEDIAMAHHFRDAYRHPDPRELRERHRPLVVPG 290
Query: 320 GYQDELVDHRLTEREWADEWKHLDHALNCIMEMVEKTRRSMAVLRRCQESDREELNYWKR 379
Q+E++DH+LTEREWA+EWKHL++ LNCIM+MVEKTRRS+ VLRRCQE+DREELN+W R
Sbjct: 291 SRQEEVIDHKLTEREWAEEWKHLNNLLNCIMDMVEKTRRSLTVLRRCQEADREELNHWAR 350
Query: 380 RYNENTELRKTGTELVSRQHSPGSA-DSLSNDSQREFNSRPGTGYVPVEFWKKTEEAVNK 438
RY++ + +K +R S + + D REF R TGYVP + W+K EEAVN+
Sbjct: 351 RYSDAEDTKKGPAPAAARPRSSSAGPEGPQLDVPREFLPRTLTGYVPEDIWRKAEEAVNE 410
Query: 439 VKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEESTENC 498
VK QAMSE+QKAV++AE+KA E+I TERA+ME+ +A+ KRQA+EDA VIN+QE+S+E+C
Sbjct: 411 VKRQAMSELQKAVSDAERKAHELITTERAKMERALAEAKRQASEDALTVINQQEDSSESC 470
Query: 499 WNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHG-------------QSPHG 545
WNCGRKASETCSGCN ARYCGSFCQH+DWE+HH +CGQ+L G ++ H
Sbjct: 471 WNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPTAVVADPVPGPPEAAHS 530
Query: 546 QGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVTAIDT 592
G P LPVG S PS A SA SR +P+ +DT
Sbjct: 531 LG-PSLPVGAAS---------PSEA---GSAGPSRPGSPSPPGPLDT 564
>gi|28872803 myeloid translocation gene on chromosome 16 isoform
MTG16a [Homo sapiens]
Length = 653
Score = 677 bits (1746), Expect = 0.0
Identities = 354/616 (57%), Positives = 435/616 (70%), Gaps = 63/616 (10%)
Query: 17 RVPAMPGSPVEVKIQSRSSPPTMPPLPPI-NPGGPRPVSFTPTA---------------- 59
+ AMP SP EVK Q RS+PP+MPP PP + G RP SFTP
Sbjct: 58 KASAMPDSPAEVKTQPRSTPPSMPPPPPAASQGATRPPSFTPHTHREDGPATLPHGRFHG 117
Query: 60 ---------LSNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKL 110
L NG +HSP +NGAP P FSNGPA+S++++L+ Q LP CGARQLSKL
Sbjct: 118 CLKWSMVCLLMNGSSHSPTAINGAPCTPNGFSNGPATSSTASLSTQHLPPACGARQLSKL 177
Query: 111 KRFLTTLQQFGNDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLK 170
KRFLTTLQQFG+DISPEIGE+VRTLVL LVNST+TIEEFH KLQEATNFPLRPFVIPFLK
Sbjct: 178 KRFLTTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLK 237
Query: 171 ANLPLLQRELLHCARAAKQTPSQYLAQHEHLLLNTSIASPADSSELLMEVHGNGKRPSPE 230
ANLPLLQRELLHCAR AKQTP+QYLAQHE LLL+ S +SP DSSELL+EV+ NGKR +P+
Sbjct: 238 ANLPLLQRELLHCARLAKQTPAQYLAQHEQLLLDASASSPIDSSELLLEVNENGKRRTPD 297
Query: 231 RREENSFDRDTIAPEPPAKRVCTISPAPRHSPALTVPLMNPGGQFHPTPPPLQHYTLEDI 290
R +EN DRD + PE +KR CT++PA R+SP+ G PTPPP HY LEDI
Sbjct: 298 RTKENGSDRDPLHPEHLSKRPCTLNPAQRYSPS--------NGPPQPTPPP--HYRLEDI 347
Query: 291 ATSHLYREPNKMLEHREVRDRHHSLGLNGGYQDELVDHRLTEREWADEWKHLDHALNCIM 350
A +H +R+ + + RE+R+RH L + G Q+E++DH+LTEREWA+EWKHL++ LNCIM
Sbjct: 348 AMAHHFRDAYRHPDPRELRERHRPLVVPGSRQEEVIDHKLTEREWAEEWKHLNNLLNCIM 407
Query: 351 EMVEKTRRSMAVLRRCQESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSA-DSLSN 409
+MVEKTRRS+ VLRRCQE+DREELN+W RRY++ + +K +R S + +
Sbjct: 408 DMVEKTRRSLTVLRRCQEADREELNHWARRYSDAEDTKKGPAPAAARPRSSSAGPEGPQL 467
Query: 410 DSQREFNSRPGTGYVPVEFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARM 469
D REF R TGYVP + W+K EEAVN+VK QAMSE+QKAV++AE+KA E+I TERA+M
Sbjct: 468 DVPREFLPRTLTGYVPEDIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELITTERAKM 527
Query: 470 EQTIADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWER 529
E+ +A+ KRQA+EDA VIN+QE+S+E+CWNCGRKASETCSGCN ARYCGSFCQH+DWE+
Sbjct: 528 ERALAEAKRQASEDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEK 587
Query: 530 HHRLCGQNLHG-------------QSPHGQGRPLLPVGRGSSARSADCSVPSPALDKTSA 576
HH +CGQ+L G ++ H G P LPVG S PS A SA
Sbjct: 588 HHHVCGQSLQGPTAVVADPVPGPPEAAHSLG-PSLPVGAAS---------PSEA---GSA 634
Query: 577 TTSRSSTPASVTAIDT 592
SR +P+ +DT
Sbjct: 635 GPSRPGSPSPPGPLDT 650
>gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
Length = 565
Score = 68.2 bits (165), Expect = 2e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 474 ADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRL 533
A R+AA + + + E ++C NCGR+A C+GC+ YC +FCQ KDW+ H +
Sbjct: 480 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 539
Query: 534 CGQN 537
CGQ+
Sbjct: 540 CGQS 543
>gi|239749940 PREDICTED: similar to deformed epidermal
autoregulatory factor 1 [Homo sapiens]
Length = 426
Score = 68.2 bits (165), Expect = 2e-11
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 474 ADVKRQAAEDAFLVINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRL 533
A R+AA + + + E ++C NCGR+A C+GC+ YC +FCQ KDW+ H +
Sbjct: 341 ASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHI 400
Query: 534 CGQN 537
CGQ+
Sbjct: 401 CGQS 404
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 48.9 bits (115), Expect = 1e-05
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 78 PQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLTTLQQFGND--ISPEIGEKVRTL 135
PQR G A++TSSA T + K K FL+TL + + S E V+ L
Sbjct: 572 PQRTVPG-ATTTSSAATETM-------ENVKKCKNFLSTLIKLASSGKQSTETAANVKEL 623
Query: 136 VLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARAAKQTPSQ 193
V L++ + E+F +L N +P+++PFLK +LP L++ A +Q+ Q
Sbjct: 624 VQNLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQ 681
Score = 32.0 bits (71), Expect = 1.7
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 10/84 (11%)
Query: 19 PAMPGSPVEVK--IQSRSSPPTMPPLPPINPG------GPRPVSFTPTALSNGINH--SP 68
PA PG+ ++ + + + P P PP P P P P L+ H P
Sbjct: 231 PAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGP 290
Query: 69 PTLNGAPSPPQRFSNGPASSTSSA 92
PT A PP NG ++ + A
Sbjct: 291 PTAAPAVPPPAAAQNGGSAGAAPA 314
>gi|148792970 TAF4b RNA polymerase II, TATA box binding protein
(TBP)-associated factor, 105kDa [Homo sapiens]
Length = 862
Score = 48.1 bits (113), Expect = 2e-05
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Query: 53 VSFTPTALSNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKR 112
V+ TP N + P+ GA S P N A ++++ N L T + K K
Sbjct: 208 VTVTPGKPLNTVTTLKPSSLGASSTPSNEPNLKAENSAAVQIN--LSPTM-LENVKKCKN 264
Query: 113 FLTTLQQFG--NDISPEIGEKVRTLVLALVNSTVTIEEFHCKLQEATNFPLRPFVIPFLK 170
FL L + SPE+G+ V+ LV L+++ + EEF KL +P ++PFLK
Sbjct: 265 FLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEAEEFTRKLYVELKSSPQPHLVPFLK 324
Query: 171 ANLPLLQREL 180
++ L++ L
Sbjct: 325 KSVVALRQLL 334
>gi|31652264 RNA binding motif protein 26 [Homo sapiens]
Length = 980
Score = 44.7 bits (104), Expect = 2e-04
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 12/71 (16%)
Query: 17 RVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGP-----RPVSFTPTALSNGINHSPPTL 71
R P P P+ + + PP PPLPP+ P G S PT ++ GI+H PP
Sbjct: 361 RPPVPPPGPLPPSLPPVTGPP--PPLPPLQPSGMDAPPNSATSSVPTVVTTGIHHQPP-- 416
Query: 72 NGAPSPPQRFS 82
P+PP F+
Sbjct: 417 ---PAPPSLFT 424
Score = 35.4 bits (80), Expect = 0.15
Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 12/94 (12%)
Query: 2 VGVPGAAAFQLGPEK-RVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTAL 60
V +PG F P P PG P I + PP + PP+ P GP P S P
Sbjct: 323 VNLPGMLPFPAQPPVVEGPPPPGLPPPPPILT---PPPVNLRPPVPPPGPLPPSLPP--- 376
Query: 61 SNGINHSPPTLNGAPSPPQRFSNGPASSTSSALT 94
+ PP L P P P S+TSS T
Sbjct: 377 ---VTGPPPPL--PPLQPSGMDAPPNSATSSVPT 405
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 43.9 bits (102), Expect = 4e-04
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 15 EKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGIN----HSPPT 70
+K P P SP +PP PP PP+ P P+P S P + N ++ PPT
Sbjct: 1945 DKLYPISPSSP--------ETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPT 1996
Query: 71 LNGAPSPPQRFSNGPASSTSSALTNQQLPAT 101
P PP P SA QLP +
Sbjct: 1997 PPPPPPPPPPPPPPPPPPPPSAPPQVQLPVS 2027
Score = 32.7 bits (73), Expect = 0.97
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 19 PAMPGSPVEVKIQSRSSPPTMPPLPP----INPGGPRPVSFTPTALSN---GINHSP--P 69
P +PG P V + + P ++P P + P G + F +A S+ ++ +P P
Sbjct: 3054 PGLPGLP-PVLLPGMNGPSSLPGFPQNSNTLTPPGAGMLGFPTSATSSPALSLSSAPTKP 3112
Query: 70 TLNGAPSPPQRFSNGPASSTSSALTNQQ 97
L P PP P+SS S T QQ
Sbjct: 3113 LLQTPPPPPPPPPPPPSSSLSGQQTEQQ 3140
>gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo
sapiens]
Length = 441
Score = 43.9 bits (102), Expect = 4e-04
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 448 QKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFLVINEQEES------TENCWNC 501
+K + E+ +K AT ++ ++IA V+ + AF V+ + E C C
Sbjct: 264 EKIIRESIRKFPYCEATLLQQLVRSIAPVEIGSDPTAFSVLTQAITGQVGFVDVEFCTTC 323
Query: 502 GRK-ASETCSGCNIARYCGSFCQHKDWERHHRLC 534
G K AS+ CS C + YC CQ W H ++C
Sbjct: 324 GEKGASKRCSVCKMVIYCDQTCQKTHWFTHKKIC 357
>gi|19923997 zinc finger, MYND domain containing 19 [Homo sapiens]
Length = 227
Score = 43.1 bits (100), Expect = 7e-04
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 509 CSGCNIARYCGSFCQHKDWERHHRLC 534
C C +ARYCGS CQ KDW H + C
Sbjct: 187 CGRCQVARYCGSQCQQKDWPAHKKHC 212
>gi|148612857 sickle tail isoform 3 [Homo sapiens]
Length = 1309
Score = 41.6 bits (96), Expect = 0.002
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 13 GPEKRVPAMPGSPVEVKIQSRSSPPTMPP------LPPINPGGPRPVSFTPTALSNGINH 66
G +P P + + + SP T PP +P ++ G + S T T + ++
Sbjct: 1186 GDSSNLPNPPATKPSIA-SNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF 1244
Query: 67 SPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPAT 101
SP + NG PP FS+ P S SS NQ T
Sbjct: 1245 SPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGT 1279
>gi|148612813 sickle tail isoform 2 [Homo sapiens]
Length = 1264
Score = 41.6 bits (96), Expect = 0.002
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 13 GPEKRVPAMPGSPVEVKIQSRSSPPTMPP------LPPINPGGPRPVSFTPTALSNGINH 66
G +P P + + + SP T PP +P ++ G + S T T + ++
Sbjct: 1141 GDSSNLPNPPATKPSIA-SNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF 1199
Query: 67 SPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPAT 101
SP + NG PP FS+ P S SS NQ T
Sbjct: 1200 SPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGT 1234
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 41.6 bits (96), Expect = 0.002
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 13 GPEKRVPAMPGSPVEVKIQSRSSPPTMPP------LPPINPGGPRPVSFTPTALSNGINH 66
G +P P + + + SP T PP +P ++ G + S T T + ++
Sbjct: 1820 GDSSNLPNPPATKPSIA-SNPLSPQTGPPAHSASLIPSVSNGSLKFQSLTHTGKGHHLSF 1878
Query: 67 SPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPAT 101
SP + NG PP FS+ P S SS NQ T
Sbjct: 1879 SPQSQNGRAPPPLSFSSSPPSPASSVSLNQGAKGT 1913
>gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens]
Length = 440
Score = 40.8 bits (94), Expect = 0.004
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 431 KTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERAR-----MEQTIADVKRQAAEDAF 485
+T+ + ++ + E+ + + + ++ IA + + EQ + R+ AE
Sbjct: 321 ETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHVFSPSEQDLRLQARRWAETYR 380
Query: 486 L-VINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 534
L V+ C C +AS+ CS C YC CQ K WE+H + C
Sbjct: 381 LDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 40.4 bits (93), Expect = 0.005
Identities = 15/37 (40%), Positives = 18/37 (48%)
Query: 498 CWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 534
C CG S CS C YC + CQ +DW H +C
Sbjct: 170 CHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVC 206
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 40.4 bits (93), Expect = 0.005
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 448 QKAVAEAEQKAFEVIATERARMEQT----IADVKRQAAEDAFLVINEQEESTENCWNCGR 503
Q+ ++E + +A R +EQ IA+VK+Q + ++E ++ + C NC +
Sbjct: 924 QQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKK-QWCANCKK 982
Query: 504 KASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPV------GRGS 557
+A C C YC CQ W H + C Q+ G S
Sbjct: 983 EAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSS 1040
Query: 558 SARSADCSVPSPALDK-TSATTSRSS 582
S +SA S + +K TSA S+ S
Sbjct: 1041 STQSAPSETASASKEKETSAEKSKES 1066
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 40.4 bits (93), Expect = 0.005
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 448 QKAVAEAEQKAFEVIATERARMEQT----IADVKRQAAEDAFLVINEQEESTENCWNCGR 503
Q+ ++E + +A R +EQ IA+VK+Q + ++E ++ + C NC +
Sbjct: 949 QQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKK-QWCANCKK 1007
Query: 504 KASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPV------GRGS 557
+A C C YC CQ W H + C Q+ G S
Sbjct: 1008 EAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSS 1065
Query: 558 SARSADCSVPSPALDK-TSATTSRSS 582
S +SA S + +K TSA S+ S
Sbjct: 1066 STQSAPSETASASKEKETSAEKSKES 1091
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 40.4 bits (93), Expect = 0.005
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 14/146 (9%)
Query: 448 QKAVAEAEQKAFEVIATERARMEQT----IADVKRQAAEDAFLVINEQEESTENCWNCGR 503
Q+ ++E + +A R +EQ IA+VK+Q + ++E ++ + C NC +
Sbjct: 949 QQELSEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKK-QWCANCKK 1007
Query: 504 KASETCSGCNIARYCGSFCQHKDWERHHRLCGQNLHGQSPHGQGRPLLPV------GRGS 557
+A C C YC CQ W H + C Q+ G S
Sbjct: 1008 EAIFYC--CWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSS 1065
Query: 558 SARSADCSVPSPALDK-TSATTSRSS 582
S +SA S + +K TSA S+ S
Sbjct: 1066 STQSAPSETASASKEKETSAEKSKES 1091
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 40.0 bits (92), Expect = 0.006
Identities = 31/97 (31%), Positives = 37/97 (38%), Gaps = 9/97 (9%)
Query: 19 PAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSN--------GINHSPPT 70
PA P PV PP PPLPP + GP P P L N G +PP
Sbjct: 667 PAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPP-PPPPLPNSPAPPNPGGPPPAPPP 725
Query: 71 LNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQL 107
AP PP G SS+S + +C + L
Sbjct: 726 PGLAPPPPPGLFFGLGSSSSQCPRKPAIEPSCPMKPL 762
Score = 33.1 bits (74), Expect = 0.74
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Query: 15 EKRVPAMPGS-----PVEVKIQSRSSPPTMPPL---PPINPGGPRPVSF-TPTALSNGIN 65
+K +P P S P+ + S S P MPP+ PP+ P P P P++
Sbjct: 642 QKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPP 701
Query: 66 HSPPTLNGAPSPPQRFSNGPA 86
PP L +P+PP PA
Sbjct: 702 PPPPPLPNSPAPPNPGGPPPA 722
Score = 30.8 bits (68), Expect = 3.7
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 20/136 (14%)
Query: 364 RRCQESDREELNYWKRRYNENTELRKTGTELVSRQHSPGSADSLSND-SQREFNSR-PG- 420
R+ +D EL KR+ E + E + + + G +DS S D S E + R PG
Sbjct: 414 RKGTTADTSELEALKRKMRHEKESLRAVFERSNSKPADGPSDSKSPDHSLTEQDDRTPGR 473
Query: 421 -TGYVPVEFWKKTEE-------------AVNKVKIQAMSEVQKAVAEAEQKAFEV---IA 463
P K TEE A+ +K + E++ A+ E +AF + A
Sbjct: 474 LQAVWPPPKTKDTEEKVGLKYTEAEYQAAILHLKREHKEEIENLQAQFELRAFHIRGEHA 533
Query: 464 TERARMEQTIADVKRQ 479
AR+E+TI ++K +
Sbjct: 534 MITARLEETIENLKHE 549
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 39.7 bits (91), Expect = 0.008
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 21/132 (15%)
Query: 6 GAAAFQLGPEKRVPAMPGSPVEVKIQSRSSPPT-------MPPLPPINPGGPRPVSFTPT 58
G + ++ +KR P +E ++ + PP PP PP PG P P P+
Sbjct: 132 GPSPEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPS 191
Query: 59 ---ALSNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSKLKRFLT 115
A ++G PP P+PP + GP + A P A +KL++
Sbjct: 192 GVPAAAHGAGGGPP-----PAPPLPAAQGPGGGGAGA------PGLAAAIAGAKLRKVSK 240
Query: 116 TLQQFGNDISPE 127
+ G +P+
Sbjct: 241 QEEASGGPTAPK 252
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.3 bits (90), Expect = 0.010
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 14 PEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPT--- 70
P + P++ P++V +SPP P P P P P++ P L+ +PP
Sbjct: 467 PSQAPPSLAAPPLQVPPSPPASPPMSPSATP-PPQAPPPLAAPPLQLAKPPPQAPPALAT 525
Query: 71 --LNGAPSPPQRFSNGPASSTSSAL 93
L PSPP F S S++L
Sbjct: 526 PPLQALPSPPASFPGQAPFSPSASL 550
Score = 35.0 bits (79), Expect = 0.20
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 8 AAFQLGPEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHS 67
AA LGP P SP +QS++ PPT+P P + TP L+ +
Sbjct: 292 AAPALGPLSSSPLATPSP-SAALQSQA-PPTLPATP--HSSSLTCQLATPLPLAPPSPSA 347
Query: 68 PPTLNGAPSPPQRFSNGPASSTSSALTNQQLPAT 101
PP+L PSPP P S +++L + L AT
Sbjct: 348 PPSLQTLPSPPAT----PPSQATTSLGSPTLQAT 377
Score = 33.9 bits (76), Expect = 0.44
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 14 PEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNG 73
P + PA+ P +Q+ SPP PPL P+ P+ P AL+ + +P +
Sbjct: 393 PPQAPPALALPP----LQAPPSPPASPPLSPLATPSPQ----APNALAVHLLQAP--FSP 442
Query: 74 APSPPQRFSNGPASS---TSSALTNQQLPATCGARQL 107
PSPP + P +S + SA Q P + A L
Sbjct: 443 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPL 479
Score = 30.0 bits (66), Expect = 6.3
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 19/100 (19%)
Query: 19 PAMPGSPVEVKIQSRSSPPTMPPL---------PPINPGGPRPVSFTPTALSNGINHSPP 69
P P + +Q+ SPP PP+ PP++P P P+ + P
Sbjct: 425 PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL-------AAP 477
Query: 70 TLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSK 109
L PSPP ++ P S +++ P QL+K
Sbjct: 478 PLQVPPSPP---ASPPMSPSATPPPQAPPPLAAPPLQLAK 514
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.3 bits (90), Expect = 0.010
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 14 PEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPT--- 70
P + P++ P++V +SPP P P P P P++ P L+ +PP
Sbjct: 428 PSQAPPSLAAPPLQVPPSPPASPPMSPSATP-PPQAPPPLAAPPLQLAKPPPQAPPALAT 486
Query: 71 --LNGAPSPPQRFSNGPASSTSSAL 93
L PSPP F S S++L
Sbjct: 487 PPLQALPSPPASFPGQAPFSPSASL 511
Score = 38.1 bits (87), Expect = 0.023
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 17 RVPAMPGSPVEVKIQSRSSPPTMPP----LPPINPGGPRPVSFTPTALSNGINHSPPTLN 72
R PA P P +Q+ P PP P + P P++ TP+ + +PP+L
Sbjct: 255 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA-TPSPSAPPSPSAPPSLQ 313
Query: 73 GAPSPPQRFSNGPASSTSSALTNQQLPAT 101
PSPP P S +++L + L AT
Sbjct: 314 TLPSPPAT----PPSQATTSLGSPTLQAT 338
Score = 33.9 bits (76), Expect = 0.44
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 14 PEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGINHSPPTLNG 73
P + PA+ P +Q+ SPP PPL P+ P+ P AL+ + +P +
Sbjct: 354 PPQAPPALALPP----LQAPPSPPASPPLSPLATPSPQ----APNALAVHLLQAP--FSP 403
Query: 74 APSPPQRFSNGPASS---TSSALTNQQLPATCGARQL 107
PSPP + P +S + SA Q P + A L
Sbjct: 404 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPL 440
Score = 30.0 bits (66), Expect = 6.3
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 19/100 (19%)
Query: 19 PAMPGSPVEVKIQSRSSPPTMPPL---------PPINPGGPRPVSFTPTALSNGINHSPP 69
P P + +Q+ SPP PP+ PP++P P P+ + P
Sbjct: 386 PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSL-------AAP 438
Query: 70 TLNGAPSPPQRFSNGPASSTSSALTNQQLPATCGARQLSK 109
L PSPP ++ P S +++ P QL+K
Sbjct: 439 PLQVPPSPP---ASPPMSPSATPPPQAPPPLAAPPLQLAK 475
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 39.3 bits (90), Expect = 0.010
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 5 PGAAAFQLGPEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRPVSFTPTALSNGI 64
PG L V A P P + P +PPL P N G V +P + +G
Sbjct: 1038 PGPVPQVLPASLMVSASPAGPPLIPASRPPGPVLLPPLQP-NSGSLPQVLPSPLGVLSGT 1096
Query: 65 NHSP-PTLNGAPSPPQ--RFSNGPASSTSSALTNQQLP 99
+ P PTL+ P+PP R S P +SS L +P
Sbjct: 1097 SRPPTPTLSLKPTPPAPVRLSPAPPPGSSSLLKPLTVP 1134
Score = 37.4 bits (85), Expect = 0.039
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 17/115 (14%)
Query: 2 VGVPGAAAFQLGPEKRVPAMPGSPVEVKIQ-----SRSSPPTM----PPLPPINPGGPRP 52
V VP +++ + +PA +P+ + I S S P + PPL P+ P P P
Sbjct: 1431 VSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVTPPLAPVVPAAPGP 1490
Query: 53 VSFTP-------TALSNGINHSPPTLNGAPSPPQRFSNGPASSTSSALTNQQLPA 100
S P +AL+ G+ + P+L+ + +P P SS L + PA
Sbjct: 1491 PSLAPSGASPSASALTLGL-ATAPSLSSSQTPGHPLLLAPTSSHVPGLNSTVAPA 1544
Score = 31.6 bits (70), Expect = 2.2
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 14 PEKRVPAMPGSPVEVKIQSRSSPPTMPPLPPINPGGPRP---VSFTPTALSNGI--NHSP 68
P + + PG P+ Q+ S P PPL P +P GP P ++ P + S + S
Sbjct: 1728 PAQTLSLAPGPPLG-PTQTLSLAPA-PPLAPASPVGPAPAHTLTLAPASSSASLLAPASV 1785
Query: 69 PTLNGAPSPPQRFSNGPASSTSSALTNQQLPAT 101
TL +P+P A + + A + Q PA+
Sbjct: 1786 QTLTLSPAPVPTLGPAAAQTLALAPASTQSPAS 1818
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,186,813
Number of Sequences: 37866
Number of extensions: 1574232
Number of successful extensions: 9587
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 357
Number of HSP's that attempted gapping in prelim test: 7714
Number of HSP's gapped (non-prelim): 1893
length of query: 595
length of database: 18,247,518
effective HSP length: 108
effective length of query: 487
effective length of database: 14,157,990
effective search space: 6894941130
effective search space used: 6894941130
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.