Search of human proteins with 73486653

Search of human proteins with 73486653

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|73486653 membrane-spanning 4-domains, subfamily A, member 3
isoform b [Homo sapiens]
         (168 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|73486653 membrane-spanning 4-domains, subfamily A, member 3 i...   337   4e-93
gi|73486649 membrane-spanning 4-domains, subfamily A, member 3 i...   315   2e-86
gi|73486651 membrane-spanning 4-domains, subfamily A, member 3 i...   182   2e-46
gi|20070328 membrane-spanning 4-domains, subfamily A, member 4 i...    62   3e-10
gi|23110995 membrane-spanning 4-domains, subfamily A, member 4 i...    62   3e-10
gi|239755562 PREDICTED: membrane-spanning 4-domains, subfamily A...    59   2e-09
gi|239750062 PREDICTED: membrane-spanning 4-domains, subfamily A...    59   2e-09
gi|239744375 PREDICTED: membrane-spanning 4-domains, subfamily A...    58   3e-09
gi|8923206 membrane-spanning 4-domains, subfamily A, member 12 [...    42   2e-04
gi|13899295 membrane-spanning 4-domains, subfamily A, member 8B ...    40   7e-04
gi|23238234 membrane-spanning 4-domains, subfamily A, member 6A ...    40   0.001
gi|23238238 membrane-spanning 4-domains, subfamily A, member 6A ...    40   0.001
gi|169202868 PREDICTED: similar to membrane-spanning 4-domains, ...    39   0.002
gi|169203526 PREDICTED: similar to membrane-spanning 4-domains, ...    39   0.002
gi|169202217 PREDICTED: similar to membrane-spanning 4-domains, ...    39   0.002
gi|149588599 membrane-spanning 4-domains, subfamily A, member 15...    39   0.002
gi|22749421 membrane-spanning 4-domains, subfamily A, member 15 ...    39   0.002
gi|4503677 membrane-spanning 4-domains, subfamily A, member 2 is...    38   0.005
gi|46249347 membrane-spanning 4-domains, subfamily A, member 7 i...    35   0.023
gi|46249359 membrane-spanning 4-domains, subfamily A, member 7 i...    35   0.023
gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens]    33   0.15 
gi|23110997 membrane-spanning 4-domains, subfamily A, member 5 [...    32   0.20 
gi|21264311 membrane-spanning 4-domains, subfamily A, member 6E ...    32   0.20 
gi|33695107 G protein-coupled receptor 55 [Homo sapiens]               30   0.75 
gi|11139299 membrane-spanning 4-domains, subfamily A, member 7 i...    30   0.75 
gi|46249357 membrane-spanning 4-domains, subfamily A, member 7 i...    30   0.75 
gi|139394599 hypermethylated in cancer 2 [Homo sapiens]                30   0.97 
gi|23238236 membrane-spanning 4-domains, subfamily A, member 6A ...    30   1.3  
gi|14780900 olfactory receptor, family 2, subfamily B, member 2 ...    28   2.8  
gi|62988276 mitochondrial RNase P protein 3 [Homo sapiens]             28   3.7  

>gi|73486653 membrane-spanning 4-domains, subfamily A, member 3
           isoform b [Homo sapiens]
          Length = 168

 Score =  337 bits (863), Expect = 4e-93
 Identities = 168/168 (100%), Positives = 168/168 (100%)

Query: 1   MASHEVDNAELGSASAHGTPGSEAGPEELNTSVYQPIDGSPDYQKAKLQVLGFCSSGTLS 60
           MASHEVDNAELGSASAHGTPGSEAGPEELNTSVYQPIDGSPDYQKAKLQVLGFCSSGTLS
Sbjct: 1   MASHEVDNAELGSASAHGTPGSEAGPEELNTSVYQPIDGSPDYQKAKLQVLGFCSSGTLS 60

Query: 61  VVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYM 120
           VVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYM
Sbjct: 61  VVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYM 120

Query: 121 GSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPNSV 168
           GSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPNSV
Sbjct: 121 GSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPNSV 168


>gi|73486649 membrane-spanning 4-domains, subfamily A, member 3
           isoform a [Homo sapiens]
          Length = 214

 Score =  315 bits (806), Expect = 2e-86
 Identities = 168/214 (78%), Positives = 168/214 (78%), Gaps = 46/214 (21%)

Query: 1   MASHEVDNAELGSASAHGTPGSEAGPEELNTSVYQPIDGSPDYQKAKLQVLG-------- 52
           MASHEVDNAELGSASAHGTPGSEAGPEELNTSVYQPIDGSPDYQKAKLQVLG        
Sbjct: 1   MASHEVDNAELGSASAHGTPGSEAGPEELNTSVYQPIDGSPDYQKAKLQVLGAIQILNAA 60

Query: 53  --------------------------------------FCSSGTLSVVAGIKPTRTWIQN 74
                                                 FCSSGTLSVVAGIKPTRTWIQN
Sbjct: 61  MILALGVFLGSLQYPYHFQKHFFFFTFYTGYPIWGAVFFCSSGTLSVVAGIKPTRTWIQN 120

Query: 75  SFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYMGSISNGMVSLLLIL 134
           SFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYMGSISNGMVSLLLIL
Sbjct: 121 SFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYMGSISNGMVSLLLIL 180

Query: 135 TLLELCVTISTIAMWCNANCCNSREEISSPPNSV 168
           TLLELCVTISTIAMWCNANCCNSREEISSPPNSV
Sbjct: 181 TLLELCVTISTIAMWCNANCCNSREEISSPPNSV 214


>gi|73486651 membrane-spanning 4-domains, subfamily A, member 3
           isoform c [Homo sapiens]
          Length = 91

 Score =  182 bits (461), Expect = 2e-46
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 78  MNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYMGSISNGMVSLLLILTLL 137
           MNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYMGSISNGMVSLLLILTLL
Sbjct: 1   MNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSESPDLCNYMGSISNGMVSLLLILTLL 60

Query: 138 ELCVTISTIAMWCNANCCNSREEISSPPNSV 168
           ELCVTISTIAMWCNANCCNSREEISSPPNSV
Sbjct: 61  ELCVTISTIAMWCNANCCNSREEISSPPNSV 91


>gi|20070328 membrane-spanning 4-domains, subfamily A, member 4
           isoform a [Homo sapiens]
          Length = 220

 Score = 61.6 bits (148), Expect = 3e-10
 Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F  SG+LS+ AGI+ T+  ++ S GMNI S+ +A  G    + ++A        C+    
Sbjct: 92  FIISGSLSIAAGIRTTKGLVRGSLGMNITSSVLAASGILINTFSLAFYSFHHPYCNYYGN 151

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCC 155
           S + C+   SI  G+  ++L+L++LE C+ +S  A  C   CC
Sbjct: 152 SNN-CHGTMSILMGLDGMVLLLSVLEFCIAVSLSAFGCKVLCC 193


>gi|23110995 membrane-spanning 4-domains, subfamily A, member 4
           isoform b [Homo sapiens]
          Length = 239

 Score = 61.6 bits (148), Expect = 3e-10
 Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 1/103 (0%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F  SG+LS+ AGI+ T+  ++ S GMNI S+ +A  G    + ++A        C+    
Sbjct: 111 FIISGSLSIAAGIRTTKGLVRGSLGMNITSSVLAASGILINTFSLAFYSFHHPYCNYYGN 170

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCC 155
           S + C+   SI  G+  ++L+L++LE C+ +S  A  C   CC
Sbjct: 171 SNN-CHGTMSILMGLDGMVLLLSVLEFCIAVSLSAFGCKVLCC 212


>gi|239755562 PREDICTED: membrane-spanning 4-domains, subfamily A,
           member 4E isoform 1 [Homo sapiens]
          Length = 243

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F  S +LSV AGI+ T+  +  S G NI S+ +A+ G    ++++         C+    
Sbjct: 115 FIISVSLSVAAGIRTTKGLVGGSLGKNITSSVLAISGILINAISLTFYSFRYHYCNHDQL 174

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPNS 167
           S + C    SI  G   ++L+L++LE C+ +S  A  C   CC+  E +   P++
Sbjct: 175 SSN-CYMTMSILMGTDGMVLLLSVLEFCIAVSLSAFGCKVLCCSPSEVVLITPSN 228


>gi|239750062 PREDICTED: membrane-spanning 4-domains, subfamily A,
           member 4E isoform 3 [Homo sapiens]
          Length = 243

 Score = 59.3 bits (142), Expect = 2e-09
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F  S +LSV AGI+ T+  +  S G NI S+ +A+ G    ++++         C+    
Sbjct: 115 FIISVSLSVAAGIRTTKGLVGGSLGKNITSSVLAISGILINAISLTFYSFRYHYCNHDQL 174

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPNS 167
           S + C    SI  G   ++L+L++LE C+ +S  A  C   CC+  E +   P++
Sbjct: 175 SSN-CYMTMSILMGTDGMVLLLSVLEFCIAVSLSAFGCKVLCCSPSEVVLITPSN 228


>gi|239744375 PREDICTED: membrane-spanning 4-domains, subfamily A,
           member 4E isoform 3 [Homo sapiens]
          Length = 243

 Score = 58.2 bits (139), Expect = 3e-09
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 1/115 (0%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F  S +LSV AGI+ T+  +  S G NI S+ +A+ G    ++++         C+    
Sbjct: 115 FIISVSLSVAAGIRTTKGLVGGSLGKNITSSVLAISGILINAISLTFYSFRYHYCNHDQL 174

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPNS 167
           S + C    SI  G   ++L+L++LE C+ ++  A  C   CC+  E +   P++
Sbjct: 175 SSN-CYMTMSILMGTDGMVLLLSVLEFCIAVALSAFGCKVLCCSPSEVVLITPSN 228


>gi|8923206 membrane-spanning 4-domains, subfamily A, member 12
           [Homo sapiens]
          Length = 267

 Score = 42.0 bits (97), Expect = 2e-04
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 13/115 (11%)

Query: 51  LGFCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSS 110
           L F  SG+LSV A  + +R  ++ S GMNI S+ +A +G   L +++ +N  + +     
Sbjct: 137 LSFIISGSLSVSASKELSRCLVKGSLGMNIVSSILAFIGVILLLVDMCINGVAGQ----- 191

Query: 111 SESPDLCNYMGSIS-NGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSP 164
                  +Y   +S  G+ + L+I +LLE  V  +T      AN   +   +  P
Sbjct: 192 -------DYWAVLSGKGISATLMIFSLLEFFVACATAHFANQANTTTNMSVLVIP 239


>gi|13899295 membrane-spanning 4-domains, subfamily A, member 8B
           [Homo sapiens]
          Length = 250

 Score = 40.4 bits (93), Expect = 7e-04
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 11/119 (9%)

Query: 51  LGFCSSGTLSVVAGIKP-TRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHS 109
           L F  SG+LSV A  +P +   +  S G+NI SA  + VG      ++++          
Sbjct: 113 LWFIISGSLSVAAENQPYSYCLLSGSLGLNIVSAICSAVGVILFITDLSIP--------H 164

Query: 110 SSESPDLCNYMGSISNGMV--SLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPN 166
               PD   Y   ++ GM    +LL+  LLE  +  ++    C   CC S       PN
Sbjct: 165 PYAYPDYYPYAWGVNPGMAISGVLLVFCLLEFGIACASSHFGCQLVCCQSSNVSVIYPN 223


>gi|23238234 membrane-spanning 4-domains, subfamily A, member 6A
           isoform 2 [Homo sapiens]
          Length = 225

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 18/113 (15%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSC----- 107
           F  SG+LS+    + T+  + +S   +I SA  ALVG   LS+  A    +   C     
Sbjct: 95  FIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQCELDKN 154

Query: 108 ------------HSSSESPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAM 148
                       H S  + D      S++ G +SL+LI TLLE C+ + T  +
Sbjct: 155 NIPTRSYVSYFYHDSLYTTDCYTAKASLA-GTLSLMLICTLLEFCLAVLTAVL 206


>gi|23238238 membrane-spanning 4-domains, subfamily A, member 6A
           isoform 1 [Homo sapiens]
          Length = 248

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 18/113 (15%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSC----- 107
           F  SG+LS+    + T+  + +S   +I SA  ALVG   LS+  A    +   C     
Sbjct: 95  FIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQCELDKN 154

Query: 108 ------------HSSSESPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAM 148
                       H S  + D      S++ G +SL+LI TLLE C+ + T  +
Sbjct: 155 NIPTRSYVSYFYHDSLYTTDCYTAKASLA-GTLSLMLICTLLEFCLAVLTAVL 206


>gi|169202868 PREDICTED: similar to membrane-spanning 4-domains,
           subfamily A, member 8B [Homo sapiens]
          Length = 391

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 18/115 (15%)

Query: 51  LGFCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSS 110
           L +  SG+LSV A   P+   + +S   NI SA  A  G   +  ++++           
Sbjct: 187 LSYIVSGSLSVWAAKDPSPCVVNSSISFNIISALFAFAGIFIIITDLSLYY--------- 237

Query: 111 SESPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPP 165
                +  Y  ++S G    LL   LLE  +T       C A CC   E ++  P
Sbjct: 238 -----VTTYSKAVSGG----LLPFALLEFILTCVVSHFGCQATCCRQFENVAVIP 283


>gi|169203526 PREDICTED: similar to membrane-spanning 4-domains,
           subfamily A, member 8B [Homo sapiens]
          Length = 391

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 18/115 (15%)

Query: 51  LGFCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSS 110
           L +  SG+LSV A   P+   + +S   NI SA  A  G   +  ++++           
Sbjct: 187 LSYIVSGSLSVWAAKDPSPCVVNSSISFNIISALFAFAGIFIIITDLSLYY--------- 237

Query: 111 SESPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPP 165
                +  Y  ++S G    LL   LLE  +T       C A CC   E ++  P
Sbjct: 238 -----VTTYSKAVSGG----LLPFALLEFILTCVVSHFGCQATCCRQFENVAVIP 283


>gi|169202217 PREDICTED: similar to membrane-spanning 4-domains,
           subfamily A, member 8B [Homo sapiens]
          Length = 391

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 18/115 (15%)

Query: 51  LGFCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSS 110
           L +  SG+LSV A   P+   + +S   NI SA  A  G   +  ++++           
Sbjct: 187 LSYIVSGSLSVWAAKDPSPCVVNSSISFNIISALFAFAGIFIIITDLSLYY--------- 237

Query: 111 SESPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPP 165
                +  Y  ++S G    LL   LLE  +T       C A CC   E ++  P
Sbjct: 238 -----VTTYSKAVSGG----LLPFALLEFILTCVVSHFGCQATCCRQFENVAVIP 283


>gi|149588599 membrane-spanning 4-domains, subfamily A, member 15
           isoform 1 [Homo sapiens]
          Length = 240

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 19/115 (16%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F  SG+LSV A    T   +++S G NI S   A  GTA L ++  V  +          
Sbjct: 117 FIISGSLSVAAEKNHTSCLVRSSLGTNILSVMAAFAGTAILLMDFGVTNR---------- 166

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPNS 167
                     +  G +++L I T+LE    +  +   C A    +   +   PN+
Sbjct: 167 ---------DVDRGYLAVLTIFTVLEFFTAVIAMHFGCQAIHAQASAPVIFLPNA 212


>gi|22749421 membrane-spanning 4-domains, subfamily A, member 15
           isoform 2 [Homo sapiens]
          Length = 147

 Score = 38.9 bits (89), Expect = 0.002
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 19/115 (16%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F  SG+LSV A    T   +++S G NI S   A  GTA L ++  V  +          
Sbjct: 24  FIISGSLSVAAEKNHTSCLVRSSLGTNILSVMAAFAGTAILLMDFGVTNR---------- 73

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSREEISSPPNS 167
                     +  G +++L I T+LE    +  +   C A    +   +   PN+
Sbjct: 74  ---------DVDRGYLAVLTIFTVLEFFTAVIAMHFGCQAIHAQASAPVIFLPNA 119


>gi|4503677 membrane-spanning 4-domains, subfamily A, member 2
           isoform 1 [Homo sapiens]
          Length = 244

 Score = 37.7 bits (86), Expect = 0.005
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 1/92 (1%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F  SG LS+++  +     ++ S G N AS+     G   L +N+  ++  +   HS  +
Sbjct: 108 FSISGMLSIISERRNATYLVRGSLGANTASSIAGGTGITILIINLKKSLAYIH-IHSCQK 166

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTIS 144
             +   +M S S  +V ++L LT+L L   +S
Sbjct: 167 FFETKCFMASFSTEIVVMMLFLTILGLGSAVS 198


>gi|46249347 membrane-spanning 4-domains, subfamily A, member 7
           isoform 2 [Homo sapiens]
          Length = 195

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 33  VYQPIDGSPDYQKAKLQVLGFCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAF 92
           +YQ  D   +    +  VLGF  +G+LS+++G + T+ +  +S   N  S+  A  G   
Sbjct: 30  MYQNEDYLQNGLPTETTVLGFGITGSLSIISGKQSTKPFDLSSLTSNAVSSVTAGAGLFL 89

Query: 93  LSLNIAVNIQSLRSCHSSSESPDLCNY--------------MGSIS-NGMVSLLLILTLL 137
           L+ ++     + + C S  +      Y              + S+S  G++ ++LI T+L
Sbjct: 90  LADSMVALRTASQHCGSEMDYLSSLPYSEYYYPIYEIKDCLLTSVSLTGVLVVMLIFTVL 149

Query: 138 ELCVTISTIAMW 149
           EL +   +   W
Sbjct: 150 ELLLAAYSSVFW 161


>gi|46249359 membrane-spanning 4-domains, subfamily A, member 7
           isoform 2 [Homo sapiens]
          Length = 195

 Score = 35.4 bits (80), Expect = 0.023
 Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 33  VYQPIDGSPDYQKAKLQVLGFCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAF 92
           +YQ  D   +    +  VLGF  +G+LS+++G + T+ +  +S   N  S+  A  G   
Sbjct: 30  MYQNEDYLQNGLPTETTVLGFGITGSLSIISGKQSTKPFDLSSLTSNAVSSVTAGAGLFL 89

Query: 93  LSLNIAVNIQSLRSCHSSSESPDLCNY--------------MGSIS-NGMVSLLLILTLL 137
           L+ ++     + + C S  +      Y              + S+S  G++ ++LI T+L
Sbjct: 90  LADSMVALRTASQHCGSEMDYLSSLPYSEYYYPIYEIKDCLLTSVSLTGVLVVMLIFTVL 149

Query: 138 ELCVTISTIAMW 149
           EL +   +   W
Sbjct: 150 ELLLAAYSSVFW 161


>gi|30260188 Golgi autoantigen, golgin subfamily a, 5 [Homo sapiens]
          Length = 731

 Score = 32.7 bits (73), Expect = 0.15
 Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 12/86 (13%)

Query: 2   ASHEVDNAELGSASAHGTPGSEAGPEE------LNTSVYQPIDGSPDYQKAKLQVLGFCS 55
           ASH V+NA +   S+H     ++ P++      LN+S  +P  G  + +K K +   F S
Sbjct: 94  ASHPVENASVPRPSSHFVRRKKSEPDDELLFDFLNSSQKEP-TGRVEIRKEKGKTPVFQS 152

Query: 56  SGTLSVVAGIKPTRTWI----QNSFG 77
           S T S V+ + P+ T I    +NSFG
Sbjct: 153 SQT-SSVSSVNPSVTTIKTIEENSFG 177


>gi|23110997 membrane-spanning 4-domains, subfamily A, member 5
           [Homo sapiens]
          Length = 200

 Score = 32.3 bits (72), Expect = 0.20
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSCHSSSE 112
           F +SG   +    K T T I  S  MN  SA  A+ G   L+    ++   +  C  S +
Sbjct: 95  FINSGAFLIAVKRKTTETLIILSRIMNFLSALGAIAGIILLTFGFILDQNYI--CGYSHQ 152

Query: 113 SPDLCNYMGSISNGMVSLLLILTLLELCVTISTIAMWCNANCCNSRE 159
           +   C  +  +  G++  L+  +++EL +++    + C++  C+  +
Sbjct: 153 NSQ-CKAVTVLFLGILITLMTFSIIELFISLPFSILGCHSEDCDCEQ 198


>gi|21264311 membrane-spanning 4-domains, subfamily A, member 6E
           [Homo sapiens]
          Length = 147

 Score = 32.3 bits (72), Expect = 0.20
 Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 72  IQNSFGMNIASATIALVGTAFLSLN-IAVNIQSLRSCHSSSESPDL-------------- 116
           + +S   +I SA  ALVG   LS+N  A+N  SL+      + P                
Sbjct: 50  VHSSLAGSILSALSALVGFILLSVNPAALNPASLQCKLDEKDIPTRLLLSYDYHSPYTMD 109

Query: 117 CNYMGSISNGMVSLLLILTLLELCVTISTIAM 148
           C+   +   G +SL+L+ T+LE C+ + T  +
Sbjct: 110 CHRAKASLAGTLSLMLVSTVLEFCLAVLTAVL 141


>gi|33695107 G protein-coupled receptor 55 [Homo sapiens]
          Length = 319

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 1/56 (1%)

Query: 50  VLGFCSSGTLSVVAGIKP-TRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSL 104
           ++GFC S ++ ++ G +  T+ W+Q    +   +A++A+   +FL +++   +Q L
Sbjct: 196 IMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFLPVHLGFFLQFL 251


>gi|11139299 membrane-spanning 4-domains, subfamily A, member 7
           isoform 1 [Homo sapiens]
          Length = 240

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 15/117 (12%)

Query: 48  LQVLGFCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSC 107
           L  L F  +G+LS+++G + T+ +  +S   N  S+  A  G   L+ ++     + + C
Sbjct: 90  LGALCFGITGSLSIISGKQSTKPFDLSSLTSNAVSSVTAGAGLFLLADSMVALRTASQHC 149

Query: 108 HSSSESPDLCNY--------------MGSIS-NGMVSLLLILTLLELCVTISTIAMW 149
            S  +      Y              + S+S  G++ ++LI T+LEL +   +   W
Sbjct: 150 GSEMDYLSSLPYSEYYYPIYEIKDCLLTSVSLTGVLVVMLIFTVLELLLAAYSSVFW 206


>gi|46249357 membrane-spanning 4-domains, subfamily A, member 7
           isoform 1 [Homo sapiens]
          Length = 240

 Score = 30.4 bits (67), Expect = 0.75
 Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 15/117 (12%)

Query: 48  LQVLGFCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAVNIQSLRSC 107
           L  L F  +G+LS+++G + T+ +  +S   N  S+  A  G   L+ ++     + + C
Sbjct: 90  LGALCFGITGSLSIISGKQSTKPFDLSSLTSNAVSSVTAGAGLFLLADSMVALRTASQHC 149

Query: 108 HSSSESPDLCNY--------------MGSIS-NGMVSLLLILTLLELCVTISTIAMW 149
            S  +      Y              + S+S  G++ ++LI T+LEL +   +   W
Sbjct: 150 GSEMDYLSSLPYSEYYYPIYEIKDCLLTSVSLTGVLVVMLIFTVLELLLAAYSSVFW 206


>gi|139394599 hypermethylated in cancer 2 [Homo sapiens]
          Length = 615

 Score = 30.0 bits (66), Expect = 0.97
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 7   DNAELGSASAHGTPGSEAGPEELNTSVYQPIDGSPD 42
           D+A   S S HG+P + + P   N++ Y  + G+PD
Sbjct: 268 DDAAQLSDSQHGSPPAASAPPVANSASYSELGGTPD 303


>gi|23238236 membrane-spanning 4-domains, subfamily A, member 6A
           isoform 3 [Homo sapiens]
          Length = 178

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 8/84 (9%)

Query: 53  FCSSGTLSVVAGIKPTRTWIQNSFGMNIASATIALVGTAFLSLNIAV--------NIQSL 104
           F  SG+LS+    + T+  + +S   +I SA  ALVG   LS+  A         N  S 
Sbjct: 95  FIISGSLSIATEKRLTKLLVHSSLVGSILSALSALVGFIILSVKQATLNPASLQWNSLSD 154

Query: 105 RSCHSSSESPDLCNYMGSISNGMV 128
              HS+   P   +   ++  G++
Sbjct: 155 ADLHSAGILPSCAHCCAAVETGLL 178


>gi|14780900 olfactory receptor, family 2, subfamily B, member 2
           [Homo sapiens]
          Length = 357

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 127 MVSLLLILTLLELCVTISTIAMWCNANCCNSREEIS 162
           M   L  L+LL+LC T ST+      N CN+R+ IS
Sbjct: 59  MYFFLSNLSLLDLCYTTSTVPQML-VNICNTRKVIS 93


>gi|62988276 mitochondrial RNase P protein 3 [Homo sapiens]
          Length = 583

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 101 IQSLRSCHSSSE-SPDLCNYMGSISNGMVSLLLILTLLELCV 141
           I  +  CHSS + +  L  ++ + +NG+VS  L++  L LCV
Sbjct: 145 ISQMAGCHSSIDVAKSLLAWVAAKNNGIVSYDLLVKYLYLCV 186


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.127    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,309,484
Number of Sequences: 37866
Number of extensions: 232856
Number of successful extensions: 805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 765
Number of HSP's gapped (non-prelim): 41
length of query: 168
length of database: 18,247,518
effective HSP length: 95
effective length of query: 73
effective length of database: 14,650,248
effective search space: 1069468104
effective search space used: 1069468104
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.