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Search of human proteins with 71040092
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71040092 ADP-ribosylation factor interacting protein 1
isoform 2 [Homo sapiens]
(341 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71040092 ADP-ribosylation factor interacting protein 1 isofor... 672 0.0
gi|7657210 ADP-ribosylation factor interacting protein 1 isoform... 672 0.0
gi|71040094 ADP-ribosylation factor interacting protein 1 isofor... 656 0.0
gi|6912602 ADP-ribosylation factor interacting protein 2 [Homo s... 414 e-116
gi|88758603 protein interacting with C kinase 1 [Homo sapiens] 62 1e-09
gi|88758600 protein interacting with C kinase 1 [Homo sapiens] 62 1e-09
gi|7110697 protein interacting with C kinase 1 [Homo sapiens] 62 1e-09
gi|22095388 islet cell autoantigen 1,69kDa-like isoform 1 [Homo ... 55 9e-08
gi|209862841 islet cell autoantigen 1 [Homo sapiens] 41 0.001
gi|94721350 islet cell autoantigen 1 [Homo sapiens] 41 0.001
gi|12545395 islet cell autoantigen 1 [Homo sapiens] 41 0.001
gi|71061468 centromere protein E [Homo sapiens] 40 0.004
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 37 0.033
gi|64085252 hypothetical protein LOC145508 [Homo sapiens] 37 0.033
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 35 0.074
gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo s... 35 0.074
gi|238908495 similar to pleckstrin homology domain protein (5V32... 34 0.16
gi|118498356 kinectin 1 isoform a [Homo sapiens] 33 0.48
gi|118498368 kinectin 1 isoform c [Homo sapiens] 33 0.48
gi|33620775 kinectin 1 isoform a [Homo sapiens] 33 0.48
gi|116517224 coiled-coil domain containing 144B [Homo sapiens] 33 0.48
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 33 0.48
gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens] 32 0.82
gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo... 32 0.82
gi|70166430 GRINL1A combined protein isoform 2 [Homo sapiens] 32 0.82
gi|70166414 GRINL1A combined protein isoform 1 [Homo sapiens] 32 0.82
gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens] 32 0.82
gi|70166580 GRINL1A upstream protein isoform 7 [Homo sapiens] 32 0.82
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 32 0.82
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 32 0.82
>gi|71040092 ADP-ribosylation factor interacting protein 1 isoform 2
[Homo sapiens]
Length = 341
Score = 672 bits (1735), Expect = 0.0
Identities = 341/341 (100%), Positives = 341/341 (100%)
Query: 1 MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV 60
MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV
Sbjct: 1 MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV 60
Query: 61 IEAGAFQGGQRTQTKSGPVILADEIKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSR 120
IEAGAFQGGQRTQTKSGPVILADEIKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSR
Sbjct: 61 IEAGAFQGGQRTQTKSGPVILADEIKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSR 120
Query: 121 TVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHE 180
TVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHE
Sbjct: 121 TVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHE 180
Query: 181 EFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRT 240
EFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRT
Sbjct: 181 EFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRT 240
Query: 241 DLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVL 300
DLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVL
Sbjct: 241 DLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVL 300
Query: 301 FHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ 341
FHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ
Sbjct: 301 FHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ 341
>gi|7657210 ADP-ribosylation factor interacting protein 1 isoform 2
[Homo sapiens]
Length = 341
Score = 672 bits (1735), Expect = 0.0
Identities = 341/341 (100%), Positives = 341/341 (100%)
Query: 1 MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV 60
MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV
Sbjct: 1 MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV 60
Query: 61 IEAGAFQGGQRTQTKSGPVILADEIKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSR 120
IEAGAFQGGQRTQTKSGPVILADEIKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSR
Sbjct: 61 IEAGAFQGGQRTQTKSGPVILADEIKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSR 120
Query: 121 TVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHE 180
TVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHE
Sbjct: 121 TVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHE 180
Query: 181 EFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRT 240
EFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRT
Sbjct: 181 EFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRT 240
Query: 241 DLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVL 300
DLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVL
Sbjct: 241 DLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVL 300
Query: 301 FHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ 341
FHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ
Sbjct: 301 FHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ 341
>gi|71040094 ADP-ribosylation factor interacting protein 1 isoform 1
[Homo sapiens]
Length = 373
Score = 656 bits (1692), Expect = 0.0
Identities = 341/373 (91%), Positives = 341/373 (91%), Gaps = 32/373 (8%)
Query: 1 MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV 60
MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV
Sbjct: 1 MAQESPKNSAAEIPVTSNGEVDDSREHSFNRDLKHSLPSGLGLSETQITSHGFDNTKEGV 60
Query: 61 IEAGAFQG--------------------------------GQRTQTKSGPVILADEIKNP 88
IEAGAFQG GQRTQTKSGPVILADEIKNP
Sbjct: 61 IEAGAFQGSPAPPLPSVMSPSRVAASRLAQQGSDLIVPAGGQRTQTKSGPVILADEIKNP 120
Query: 89 AMEKLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQ 148
AMEKLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQ
Sbjct: 121 AMEKLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQ 180
Query: 149 TLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAINFFIA 208
TLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAINFFIA
Sbjct: 181 TLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAINFFIA 240
Query: 209 SVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQHLFQAH 268
SVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQHLFQAH
Sbjct: 241 SVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQHLFQAH 300
Query: 269 KEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQFHIKLK 328
KEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQFHIKLK
Sbjct: 301 KEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQFHIKLK 360
Query: 329 TPGVDAPSWLEEQ 341
TPGVDAPSWLEEQ
Sbjct: 361 TPGVDAPSWLEEQ 373
>gi|6912602 ADP-ribosylation factor interacting protein 2 [Homo
sapiens]
Length = 341
Score = 414 bits (1065), Expect = e-116
Identities = 203/337 (60%), Positives = 265/337 (78%), Gaps = 5/337 (1%)
Query: 7 KNSAAEIPVTSNGEVDDSREHS-FNRDLKHSLPSGLGLSETQITSHGFDNTKEGVIEAGA 65
K + EIP+ NGE E +DL+ + SG L+ET I S G+ + +G+I G+
Sbjct: 8 KAATMEIPIHGNGEARQLPEDDGLEQDLQQVMVSGPNLNETSIVSGGYGGSGDGLIPTGS 67
Query: 66 FQGGQRTQTKSGPVILADEI-KNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSRTVDL 124
+ + T SGP DE+ + A EK ++V+KW +NTYKCT+Q++SE+ GRGSRTVDL
Sbjct: 68 GRHPSHSTTPSGP---GDEVARGIAGEKFDIVKKWGINTYKCTKQLLSERFGRGSRTVDL 124
Query: 125 ELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGY 184
ELE QI++LR+ K+KYE++L+L + L+ L+ ++ TQ LGDAFADLS KS EL EEFGY
Sbjct: 125 ELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQEEFGY 184
Query: 185 NADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEE 244
NA+TQKLL KNGETLLGA+NFF++S+NTLV KT+EDTLMTVKQYE+AR+EYDAYRTDLEE
Sbjct: 185 NAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEE 244
Query: 245 LNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNA 304
L+LGPRDA T ++E +Q FQAH++KY+K+R DV++KLKFLEENK+KV+H QL+LFHNA
Sbjct: 245 LSLGPRDAGTRGRLESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNA 304
Query: 305 IAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ 341
++AYFAGNQKQLEQTL+QF+IKL+ PG + PSWLEEQ
Sbjct: 305 VSAYFAGNQKQLEQTLQQFNIKLRPPGAEKPSWLEEQ 341
>gi|88758603 protein interacting with C kinase 1 [Homo sapiens]
Length = 415
Score = 61.6 bits (148), Expect = 1e-09
Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 126 LEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLE--LHEEFG 183
L +++ L + Y+ + + + L +++ T R GD F+ + ++ + E F
Sbjct: 149 LVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFV 208
Query: 184 YNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLE 243
AD + + K G LL I + +NT +NK I DT +T+K+Y + EY +Y ++
Sbjct: 209 KFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVK 268
Query: 244 ELNLGPRD----ANTLPKIEQSQHLF-------QAHKEKYDKMRNDVSVKLKFLEENKVK 292
E++ L ++ + + Q + ++ +MR DV K++ L++ V+
Sbjct: 269 EMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQ 328
Query: 293 VLHNQLVLFHNAIAAYF 309
+ QL + ++ Y+
Sbjct: 329 DIVFQLQRLVSTMSKYY 345
>gi|88758600 protein interacting with C kinase 1 [Homo sapiens]
Length = 415
Score = 61.6 bits (148), Expect = 1e-09
Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 126 LEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLE--LHEEFG 183
L +++ L + Y+ + + + L +++ T R GD F+ + ++ + E F
Sbjct: 149 LVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFV 208
Query: 184 YNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLE 243
AD + + K G LL I + +NT +NK I DT +T+K+Y + EY +Y ++
Sbjct: 209 KFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVK 268
Query: 244 ELNLGPRD----ANTLPKIEQSQHLF-------QAHKEKYDKMRNDVSVKLKFLEENKVK 292
E++ L ++ + + Q + ++ +MR DV K++ L++ V+
Sbjct: 269 EMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQ 328
Query: 293 VLHNQLVLFHNAIAAYF 309
+ QL + ++ Y+
Sbjct: 329 DIVFQLQRLVSTMSKYY 345
>gi|7110697 protein interacting with C kinase 1 [Homo sapiens]
Length = 415
Score = 61.6 bits (148), Expect = 1e-09
Identities = 44/197 (22%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 126 LEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLE--LHEEFG 183
L +++ L + Y+ + + + L +++ T R GD F+ + ++ + E F
Sbjct: 149 LVKRLEELERTAELYKGMTEHTKNLLRAFYELSQTHRAFGDVFSVIGVREPQPAASEAFV 208
Query: 184 YNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLE 243
AD + + K G LL I + +NT +NK I DT +T+K+Y + EY +Y ++
Sbjct: 209 KFADAHRSIEKFGIRLLKTIKPMLTDLNTYLNKAIPDTRLTIKKYLDVKFEYLSYCLKVK 268
Query: 244 ELNLGPRD----ANTLPKIEQSQHLF-------QAHKEKYDKMRNDVSVKLKFLEENKVK 292
E++ L ++ + + Q + ++ +MR DV K++ L++ V+
Sbjct: 269 EMDDEEYSCIALGEPLYRVSTGNYEYRLILRCRQEARARFSQMRKDVLEKMELLDQKHVQ 328
Query: 293 VLHNQLVLFHNAIAAYF 309
+ QL + ++ Y+
Sbjct: 329 DIVFQLQRLVSTMSKYY 345
>gi|22095388 islet cell autoantigen 1,69kDa-like isoform 1 [Homo
sapiens]
Length = 482
Score = 55.1 bits (131), Expect = 9e-08
Identities = 52/246 (21%), Positives = 103/246 (41%), Gaps = 13/246 (5%)
Query: 83 DEIKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSR----TVDLELEAQIDILRDNKK 138
D P E + V + Y T+Q+ + G+ D EL+A++++ ++
Sbjct: 2 DSFGQPRPEDNQSVVRRMQKKYWKTKQVFIKATGKKEDEHLVASDAELDAKLEVFHSVQE 61
Query: 139 KYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNAD-TQKLL---AK 194
+LK+ + +L + + +LG L ++ + G D T K L AK
Sbjct: 62 TCTELLKIIEKYQLRLNVISEEENELG---LFLKFQAERDATQAGKMMDATGKALCSSAK 118
Query: 195 NGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN--LGPRDA 252
L ++ V T + + DTLMT+ + E AR EY +++++ L P
Sbjct: 119 QRLALCTPLSRLKQEVATFSQRAVSDTLMTINRMEQARTEYRGALLWMKDVSQELDPDTL 178
Query: 253 NTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGN 312
+ K + Q + K +DK++ DV K+ L ++ +L + L + + ++
Sbjct: 179 KQMEKFRKVQMQVRNSKASFDKLKMDVCQKVDLLGASRCNMLSHSLTTYQRTLLGFWKKT 238
Query: 313 QKQLEQ 318
+ + Q
Sbjct: 239 ARMMSQ 244
>gi|209862841 islet cell autoantigen 1 [Homo sapiens]
Length = 483
Score = 41.2 bits (95), Expect = 0.001
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 206 FIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN--LGPRDANTLPKIEQSQH 263
F V T ++ I DT +TV + E R EY +++++ L P + K + Q
Sbjct: 137 FHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQT 196
Query: 264 LFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQF 323
+ K+ +DK++ DV K+ L ++ +L + L + + ++ ++ T+
Sbjct: 197 QVRLAKKNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFW----EKTSHTMAAI 252
Query: 324 HIKLK 328
H K
Sbjct: 253 HESFK 257
>gi|94721350 islet cell autoantigen 1 [Homo sapiens]
Length = 483
Score = 41.2 bits (95), Expect = 0.001
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 206 FIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN--LGPRDANTLPKIEQSQH 263
F V T ++ I DT +TV + E R EY +++++ L P + K + Q
Sbjct: 137 FHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQT 196
Query: 264 LFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQF 323
+ K+ +DK++ DV K+ L ++ +L + L + + ++ ++ T+
Sbjct: 197 QVRLAKKNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFW----EKTSHTMAAI 252
Query: 324 HIKLK 328
H K
Sbjct: 253 HESFK 257
>gi|12545395 islet cell autoantigen 1 [Homo sapiens]
Length = 483
Score = 41.2 bits (95), Expect = 0.001
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Query: 206 FIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELN--LGPRDANTLPKIEQSQH 263
F V T ++ I DT +TV + E R EY +++++ L P + K + Q
Sbjct: 137 FHQEVETFRHRAISDTWLTVNRMEQCRTEYRGALLWMKDVSQELDPDLYKQMEKFRKVQT 196
Query: 264 LFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQF 323
+ K+ +DK++ DV K+ L ++ +L + L + + ++ ++ T+
Sbjct: 197 QVRLAKKNFDKLKMDVCQKVDLLGASRCNLLSHMLATYQTTLLHFW----EKTSHTMAAI 252
Query: 324 HIKLK 328
H K
Sbjct: 253 HESFK 257
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 39.7 bits (91), Expect = 0.004
Identities = 50/225 (22%), Positives = 94/225 (41%), Gaps = 41/225 (18%)
Query: 70 QRTQTKSGPVILADEIKNPAMEKLELVR---KWSLNTYKCTRQIISEKLGRGSRTV-DLE 125
Q+ S + A ++K E+L + K T R I+SEK + S DLE
Sbjct: 1755 QKDLEHSNDALKAQDLK--IQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLE 1812
Query: 126 -----LEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGD---AFADLSLKSLE 177
L+ +I L+ N+ + + K ++ +M ++Q+ D + L +++L
Sbjct: 1813 NSNAKLQEKIQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLEIENLN 1872
Query: 178 LHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDA 237
L ++ N + K + K + L + +E+TL ++E D
Sbjct: 1873 LAQKLHENLEEMKSVMKERDNL----------------RRVEETL---------KLERDQ 1907
Query: 238 YRTDLEELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVK 282
+ L+E RD +++ ++ L + HKE DK+R +S K
Sbjct: 1908 LKESLQETKA--RDLEIQQELKTARMLSKEHKETVDKLREKISEK 1950
Score = 29.6 bits (65), Expect = 4.1
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 213 LVNKTIEDTLMTVK-QYESARIEYDAYRTDLEELNLGPRDANTLPKIE---------QSQ 262
L + IE L +++ Y++ ++Y+ RT+ EE+ L ++ N L + E Q
Sbjct: 491 LNQENIESELNSLRADYDNLVLDYEQLRTEKEEMELKLKEKNDLDEFEALERKTKKDQEM 550
Query: 263 HLFQ---------AHKEKYDK-MRNDVSVKLKFLEENKVKV 293
L H E Y++ + N++S K++ L E + ++
Sbjct: 551 QLIHEISNLKNLVKHAEVYNQDLENELSSKVELLREKEDQI 591
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 36.6 bits (83), Expect = 0.033
Identities = 70/299 (23%), Positives = 121/299 (40%), Gaps = 47/299 (15%)
Query: 81 LADEIKNPAMEKLELVRKWSLNTYKCTRQIISEK-LGRGSRTVDLELEAQIDILRDNKKK 139
L E++N ++ EL T C + + K L + + + LEL+ Q + + +NKK+
Sbjct: 502 LKTELENEKLKNTEL-------TSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQ 554
Query: 140 YENILKLAQTL---STQL-FQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQ------ 189
E +LK + L TQL ++ + + +L ++ K L+ EE N Q
Sbjct: 555 EERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCK-LDKSEENCNNLRKQVENKNK 613
Query: 190 ---------KLLAKNGETLLGAINFFIASVNTL-------VNKTIEDTLMTVKQYESARI 233
K L K G +N + VN L K E T K+ E +I
Sbjct: 614 YIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKI 673
Query: 234 EYDAYRTDLEELNLGPRDANTLP---------KIEQSQHLFQAHKEKYDKM--RNDVSVK 282
+ ++E+ + +A L KI + L + HK +YDK+ D +
Sbjct: 674 SEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELG 733
Query: 283 LKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLEQTLKQFHIKLKTPGVDAPSWLEEQ 341
L +E + L L + + + A +KQLE ++ KLK + + L+E+
Sbjct: 734 LYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKE-KLKREAKENTATLKEK 791
>gi|64085252 hypothetical protein LOC145508 [Homo sapiens]
Length = 1094
Score = 36.6 bits (83), Expect = 0.033
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 30/234 (12%)
Query: 83 DEIKNP---AMEKLELVRKWSLNTYKCTRQIISEKLGRG--------SRTVDLELEAQID 131
DE+K A++++E +RK LN R + E+L S DLELE +
Sbjct: 526 DELKTQLYAALQQIENLRK-ELNDVLTKRALQEEELHSKEEKLRDIKSHQADLELEVKNS 584
Query: 132 ILRDNKKKYENILKLAQTLSTQL-FQMVHTQRQLGD---AFADLSLKSLELHEEF----G 183
+ D + E+ LK + +Q+ + H + ++ + + A K LE+ E
Sbjct: 585 L--DTIHRLESELKKQSKIQSQMKVEKAHLEEEIAELKKSQAQDKAKLLEMQESIKDLSA 642
Query: 184 YNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLE 243
AD LA+ E A+ ++ + E+T + Q ++E D ++ +L+
Sbjct: 643 IRADLANKLAEE-ERAKKAVLKDLSDLTAQAKSRDEETATIITQL---KLERDVHQRELK 698
Query: 244 ELNLGPRDANTLPKIEQS-QHLFQAHKEKYDKMRNDV-SVKLKFLEENKVKVLH 295
+L + T K EQ+ Q L + K++ + N + ++K + LEE + +H
Sbjct: 699 DLTSSLQSVKT--KHEQNIQELMKHFKKEKSEAENHIRTLKAESLEEKNMAKIH 750
Score = 32.3 bits (72), Expect = 0.63
Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 25/143 (17%)
Query: 43 LSETQITSHGFDNTKEGVIEAGAFQGGQRTQTKSGPVILADEIKNPAMEKLELVRKWSLN 102
L +++T H D TK+ Q Q K +++K A E +R+W L
Sbjct: 442 LQISELTRHAEDATKQAERYLSELQ--QSEALKEEAEKRREDLKLKAQES---IRQWKLK 496
Query: 103 TYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLF----QMV 158
K R LE Q + + + K ILK L TQL+ Q+
Sbjct: 497 HKKLERA----------------LEKQSETVDELTGKNNQILKEKDELKTQLYAALQQIE 540
Query: 159 HTQRQLGDAFADLSLKSLELHEE 181
+ +++L D +L+ ELH +
Sbjct: 541 NLRKELNDVLTKRALQEEELHSK 563
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 35.4 bits (80), Expect = 0.074
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 126 LEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADL----------SLKS 175
LE + L +K + L + L+ QL + QL + +L S+K
Sbjct: 661 LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM 720
Query: 176 LELHEEFGYNADTQKLLAKNGETLLGA---------INFFIASV-NTLVNKTIEDTLMTV 225
+L E +++K K G LL A +++ + N + KT+E++ +
Sbjct: 721 AQLQLE-NKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKI 779
Query: 226 KQYESA----RIEYDAYRTDLEELNLGPRDANTLPK----IEQSQHLFQAHKEKYDK--- 274
+Q ES +E + +LEEL + + L K +EQ + K++ +K
Sbjct: 780 QQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENK 839
Query: 275 -MRNDVSVKLKFLEENKVKV 293
+R +K LEEN VK+
Sbjct: 840 RLRQQAEIKDTTLEENNVKI 859
>gi|208022632 coiled-coil domain containing 88A isoform 1 [Homo
sapiens]
Length = 1870
Score = 35.4 bits (80), Expect = 0.074
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 33/200 (16%)
Query: 126 LEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADL----------SLKS 175
LE + L +K + L + L+ QL + QL + +L S+K
Sbjct: 661 LEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM 720
Query: 176 LELHEEFGYNADTQKLLAKNGETLLGA---------INFFIASV-NTLVNKTIEDTLMTV 225
+L E +++K K G LL A +++ + N + KT+E++ +
Sbjct: 721 AQLQLE-NKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLENSNKKI 779
Query: 226 KQYESA----RIEYDAYRTDLEELNLGPRDANTLPK----IEQSQHLFQAHKEKYDK--- 274
+Q ES +E + +LEEL + + L K +EQ + K++ +K
Sbjct: 780 QQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENK 839
Query: 275 -MRNDVSVKLKFLEENKVKV 293
+R +K LEEN VK+
Sbjct: 840 RLRQQAEIKDTTLEENNVKI 859
>gi|238908495 similar to pleckstrin homology domain protein (5V327)
[Homo sapiens]
Length = 506
Score = 34.3 bits (77), Expect = 0.16
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 31/233 (13%)
Query: 90 MEKLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKL--- 146
ME+ ++ R+ L T +C + + EK + R + L+ ++ L KKK +L+
Sbjct: 210 MEQEQIKRELEL-TARCLKGVEQEK--KELRHLTESLQQTLEELSIEKKKTLEMLEENEN 266
Query: 147 -AQTLSTQLFQM-----VHTQ-RQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETL 199
QTL+ Q Q +H+ RQ+ + L + L + N + + L + E
Sbjct: 267 HLQTLANQSEQPPPSGGLHSNLRQIEEKMQQLLEEKLLAEKRMKENEERSRALEEERE-- 324
Query: 200 LGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIE 259
F +S + + ++++ +Q E R DLE A L +E
Sbjct: 325 ------FYSSQSQALQNSLQELTAEKQQAERELKAEVKVRMDLERRLREAEGA--LRSLE 376
Query: 260 QSQHLFQAHKEKYDKMRNDVSVKLKFLE--------ENKVKVLHNQLVLFHNA 304
Q + +KEK ++MR DVS +F E E K+ V+ V H A
Sbjct: 377 QGLNSKVRNKEKEERMRADVSHLKRFFEECIRNAELEAKMPVIMKNSVYIHKA 429
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 32.7 bits (73), Expect = 0.48
Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 14/206 (6%)
Query: 137 KKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKL--LAK 194
++K E + + + L T L Q+ + +L + S + E+ + D L +
Sbjct: 738 QEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVE 797
Query: 195 NGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGP-RDAN 253
+ ++ + I SV L+ + K + + E A + ++ + L + +
Sbjct: 798 ELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLS 857
Query: 254 TLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFL-----------EENKVKVLHNQLVLFH 302
K+++ Q+L + +E+ + M+ + K K L EEN+ H Q V H
Sbjct: 858 ITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQH 917
Query: 303 NAIAAYFAGNQKQLEQTLKQFHIKLK 328
N A A ++LE LK+ +LK
Sbjct: 918 NLKEASSASQFEELEIVLKEKENELK 943
>gi|118498368 kinectin 1 isoform c [Homo sapiens]
Length = 1300
Score = 32.7 bits (73), Expect = 0.48
Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 14/206 (6%)
Query: 137 KKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKL--LAK 194
++K E + + + L T L Q+ + +L + S + E+ + D L +
Sbjct: 738 QEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVE 797
Query: 195 NGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGP-RDAN 253
+ ++ + I SV L+ + K + + E A + ++ + L + +
Sbjct: 798 ELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLS 857
Query: 254 TLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFL-----------EENKVKVLHNQLVLFH 302
K+++ Q+L + +E+ + M+ + K K L EEN+ H Q V H
Sbjct: 858 ITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQH 917
Query: 303 NAIAAYFAGNQKQLEQTLKQFHIKLK 328
N A A ++LE LK+ +LK
Sbjct: 918 NLKEASSASQFEELEIVLKEKENELK 943
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 32.7 bits (73), Expect = 0.48
Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 14/206 (6%)
Query: 137 KKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKL--LAK 194
++K E + + + L T L Q+ + +L + S + E+ + D L +
Sbjct: 738 QEKDEKLKTVEELLETGLIQVATKEEELNAIRTENSSLTKEVQDLKAKQNDQVSFASLVE 797
Query: 195 NGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGP-RDAN 253
+ ++ + I SV L+ + K + + E A + ++ + L + +
Sbjct: 798 ELKKVIHEKDGKIKSVEELLEAELLKVANKEKTVQDLKQEIKALKEEIGNVQLEKAQQLS 857
Query: 254 TLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFL-----------EENKVKVLHNQLVLFH 302
K+++ Q+L + +E+ + M+ + K K L EEN+ H Q V H
Sbjct: 858 ITSKVQELQNLLKGKEEQMNTMKAVLEEKEKDLANTGKWLQDLQEENESLKAHVQEVAQH 917
Query: 303 NAIAAYFAGNQKQLEQTLKQFHIKLK 328
N A A ++LE LK+ +LK
Sbjct: 918 NLKEASSASQFEELEIVLKEKENELK 943
>gi|116517224 coiled-coil domain containing 144B [Homo sapiens]
Length = 725
Score = 32.7 bits (73), Expect = 0.48
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 217 TIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQS----QHLFQAHKEKY 272
++E + + + E + Y+ + +E+L + +D+ +LP+I+ + +HL +
Sbjct: 597 SMEPSEIASEDCELSHSVYENFMLLIEQLRMEYKDSASLPRIQDTFCLCEHLLKLKNNHC 656
Query: 273 DKMRNDVSVKLKFLEENKVKVLHNQL 298
D++ +VKLK + EN V VL N+L
Sbjct: 657 DQL----TVKLKQM-ENMVSVLQNEL 677
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 32.7 bits (73), Expect = 0.48
Identities = 23/86 (26%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 217 TIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQS----QHLFQAHKEKY 272
++E + + + E + Y+ + +E+L + +D+ +LP+I+ + +HL +
Sbjct: 597 SMEPSEIASEDCELSHSVYENFMLLIEQLRMEYKDSASLPRIQDTFCLCEHLLKLKNNHC 656
Query: 273 DKMRNDVSVKLKFLEENKVKVLHNQL 298
D++ +VKLK + EN V VL N+L
Sbjct: 657 DQL----TVKLKQM-ENMVSVLQNEL 677
>gi|239756999 PREDICTED: ankyrin repeat domain 62 [Homo sapiens]
Length = 917
Score = 32.0 bits (71), Expect = 0.82
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 15/169 (8%)
Query: 127 EAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNA 186
E + D+ ++N + I +L + T Q T+ + K +E+ +E N
Sbjct: 552 ERERDLWQENHLMRDEIARLRLEIDTIKHQNQETENKY--------FKDIEIIKE--NNE 601
Query: 187 DTQKLLAKNGETLLGAINFFIASVNTLV--NKTIEDTLMTVKQYES-ARIEYDAYRTDLE 243
D +K L +N ETL I + +N L+ N + L KQ S E ++YR L
Sbjct: 602 DLEKTLKRNEETLTKTITRYSKELNVLMDENTMLNSELQKEKQSMSRLETEMESYRCRLA 661
Query: 244 ELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVK 292
L D K Q FQ+ ++ ++ D + ++ L + K
Sbjct: 662 AA-LCDHDQRQSSK-RDLQLAFQSTVNEWCHLQEDTNSHIQILSQQLSK 708
>gi|239751514 PREDICTED: ankyrin repeat domain 62 isoform 4 [Homo
sapiens]
Length = 917
Score = 32.0 bits (71), Expect = 0.82
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 15/169 (8%)
Query: 127 EAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNA 186
E + D+ ++N + I +L + T Q T+ + K +E+ +E N
Sbjct: 552 ERERDLWQENHLMRDEIARLRLEIDTIKHQNQETENKY--------FKDIEIIKE--NNE 601
Query: 187 DTQKLLAKNGETLLGAINFFIASVNTLV--NKTIEDTLMTVKQYES-ARIEYDAYRTDLE 243
D +K L +N ETL I + +N L+ N + L KQ S E ++YR L
Sbjct: 602 DLEKTLKRNEETLTKTITRYSKELNVLMDENTMLNSELQKEKQSMSRLETEMESYRCRLA 661
Query: 244 ELNLGPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENKVK 292
L D K Q FQ+ ++ ++ D + ++ L + K
Sbjct: 662 AA-LCDHDQRQSSK-RDLQLAFQSTVNEWCHLQEDTNSHIQILSQQLSK 708
>gi|70166430 GRINL1A combined protein isoform 2 [Homo sapiens]
Length = 445
Score = 32.0 bits (71), Expect = 0.82
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 130 IDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNAD-- 187
+D+ +N + I L QT + ++ QRQL A + L +++ NA+
Sbjct: 179 VDVTLENSNIKDQIRNLQQTYEASMDKLREKQRQLEVAQVENQLLKMKVESSQEANAEVM 238
Query: 188 ---TQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEE 244
T+KL ++ E L A L +E+T +K E A + A LEE
Sbjct: 239 REMTKKLYSQYEEKLQEEQRKHSAEKEAL----LEETNSFLKAIEEANKKMQAAEISLEE 294
Query: 245 LN--LGPRDANTLPKIEQSQHLFQ 266
+ +G D + ++E+ +H Q
Sbjct: 295 KDQRIGELD-RLIERMEKERHQLQ 317
>gi|70166414 GRINL1A combined protein isoform 1 [Homo sapiens]
Length = 550
Score = 32.0 bits (71), Expect = 0.82
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 130 IDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNAD-- 187
+D+ +N + I L QT + ++ QRQL A + L +++ NA+
Sbjct: 179 VDVTLENSNIKDQIRNLQQTYEASMDKLREKQRQLEVAQVENQLLKMKVESSQEANAEVM 238
Query: 188 ---TQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEE 244
T+KL ++ E L A L +E+T +K E A + A LEE
Sbjct: 239 REMTKKLYSQYEEKLQEEQRKHSAEKEAL----LEETNSFLKAIEEANKKMQAAEISLEE 294
Query: 245 LN--LGPRDANTLPKIEQSQHLFQ 266
+ +G D + ++E+ +H Q
Sbjct: 295 KDQRIGELD-RLIERMEKERHQLQ 317
>gi|111494235 GRINL1A combined protein isoform 8 [Homo sapiens]
Length = 438
Score = 32.0 bits (71), Expect = 0.82
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 130 IDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNAD-- 187
+D+ +N + I L QT + ++ QRQL A + L +++ NA+
Sbjct: 179 VDVTLENSNIKDQIRNLQQTYEASMDKLREKQRQLEVAQVENQLLKMKVESSQEANAEVM 238
Query: 188 ---TQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEE 244
T+KL ++ E L A L +E+T +K E A + A LEE
Sbjct: 239 REMTKKLYSQYEEKLQEEQRKHSAEKEAL----LEETNSFLKAIEEANKKMQAAEISLEE 294
Query: 245 LN--LGPRDANTLPKIEQSQHLFQ 266
+ +G D + ++E+ +H Q
Sbjct: 295 KDQRIGELD-RLIERMEKERHQLQ 317
>gi|70166580 GRINL1A upstream protein isoform 7 [Homo sapiens]
Length = 466
Score = 32.0 bits (71), Expect = 0.82
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 130 IDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNAD-- 187
+D+ +N + I L QT + ++ QRQL A + L +++ NA+
Sbjct: 179 VDVTLENSNIKDQIRNLQQTYEASMDKLREKQRQLEVAQVENQLLKMKVESSQEANAEVM 238
Query: 188 ---TQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEE 244
T+KL ++ E L A L +E+T +K E A + A LEE
Sbjct: 239 REMTKKLYSQYEEKLQEEQRKHSAEKEAL----LEETNSFLKAIEEANKKMQAAEISLEE 294
Query: 245 LN--LGPRDANTLPKIEQSQHLFQ 266
+ +G D + ++E+ +H Q
Sbjct: 295 KDQRIGELD-RLIERMEKERHQLQ 317
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 32.0 bits (71), Expect = 0.82
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 111 ISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFAD 170
++ L + R D L +++ + E LK +++LST+LF++ + + D
Sbjct: 1439 LAAALDKKQRNFDKVLAEWKTKCEESQAELEASLKESRSLSTELFKLKNAYEEALDQLET 1498
Query: 171 LSLKSLELHEEFGYNADTQKLLAKNGETL 199
+ ++ L +E AD + +A+NG+T+
Sbjct: 1499 VKRENKNLEQEI---ADLTEQIAENGKTI 1524
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 32.0 bits (71), Expect = 0.82
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 49/260 (18%)
Query: 84 EIKNPAMEKLELVRKWSLNTYKCTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENI 143
E+ +EK E + + N+ + + S +D E+ ++ D LR KK ++
Sbjct: 1575 ELDRKVIEKDEEIEQLKRNSQRAAEALQS--------VLDAEIRSRNDALRLKKKMEGDL 1626
Query: 144 LKLAQTLSTQLFQMVHTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAI 203
++ L QM TQ+ L L L L + N D ++ LA
Sbjct: 1627 NEMEIQLGHSNRQMAETQKHLRTVQGQLKDSQLHLDDALRSNEDLKEQLA---------- 1676
Query: 204 NFFIASVNTLVNKTIEDTLMTVKQYESARIEYDAYRTDLEELNLGPRDANTLPKIEQSQH 263
+ N L+ + +E+ + ++Q E R R +EL DA+ ++ SQ+
Sbjct: 1677 --IVERRNGLLLEELEEMKVALEQTERTR------RLSEQEL----LDASDRVQLLHSQN 1724
Query: 264 LFQAHKEKYDKMRNDVSVKLKFLEENKVKVLHNQLVLFHNAI----------------AA 307
+ +K K+ D++ + + EN ++ N AI +A
Sbjct: 1725 TSLINTKK--KLEADIA-QCQAEVENSIQESRNAEEKAKKAITDAAMMAEELKKEQDTSA 1781
Query: 308 YFAGNQKQLEQTLKQFHIKL 327
+ +K LEQT+K +L
Sbjct: 1782 HLERMKKNLEQTVKDLQHRL 1801
Score = 31.2 bits (69), Expect = 1.4
Identities = 40/211 (18%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 115 LGRGSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQRQLGDAFADLSLK 174
L + R D L L +++ + E K +++LST+LF+M + ++ D L +
Sbjct: 1446 LDKKQRNFDKVLAEWKQKLDESQAELEAAQKESRSLSTELFKMRNAYEEVVDQLETLRRE 1505
Query: 175 SLELHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYESARIE 234
+ L EE +D + +A+ G+ L A LV + D + +++ E + +E
Sbjct: 1506 NKNLQEEI---SDLTEQIAETGKNLQEA-----EKTKKLVEQEKSDLQVALEEVEGS-LE 1556
Query: 235 YDAYRTDLEELNL----GPRDANTLPKIEQSQHLFQAHKEKYDKMRNDVSVKLKFLEENK 290
++ + +L L D + K E+ + L + + + +++ + +++ N
Sbjct: 1557 HEESKILRVQLELSQVKSELDRKVIEKDEEIEQLKRNSQRAAEALQSVLDAEIR--SRND 1614
Query: 291 VKVLHNQLVLFHNAIAAYFAGNQKQLEQTLK 321
L ++ N + + +Q+ +T K
Sbjct: 1615 ALRLKKKMEGDLNEMEIQLGHSNRQMAETQK 1645
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,721,915
Number of Sequences: 37866
Number of extensions: 476432
Number of successful extensions: 1268
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 1232
Number of HSP's gapped (non-prelim): 108
length of query: 341
length of database: 18,247,518
effective HSP length: 103
effective length of query: 238
effective length of database: 14,347,320
effective search space: 3414662160
effective search space used: 3414662160
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.