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Search of human proteins with 61102732
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61102732 dynein 2 light intermediate chain isoform 3 [Homo
sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61102732 dynein 2 light intermediate chain isoform 3 [Homo sa... 678 0.0
gi|40548413 dynein 2 light intermediate chain isoform 1 [Homo sa... 674 0.0
gi|29824427 dynein 2 light intermediate chain isoform 2 [Homo sa... 347 9e-96
gi|166795297 dynein, cytoplasmic 1, light intermediate chain 1 [... 55 7e-08
gi|5453634 dynein, cytoplasmic, light intermediate polypeptide 2... 51 1e-06
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H... 31 1.8
gi|239753192 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|239747766 PREDICTED: hypothetical protein [Homo sapiens] 31 1.8
gi|239741632 PREDICTED: hypothetical protein XP_002342252 [Homo ... 31 1.8
gi|4885221 v-ets erythroblastosis virus E26 oncogene homolog 2 [... 30 2.3
gi|215598561 enhancer of mRNA decapping 3 [Homo sapiens] 29 5.2
gi|215598545 enhancer of mRNA decapping 3 [Homo sapiens] 29 5.2
gi|19923613 enhancer of mRNA decapping 3 [Homo sapiens] 29 5.2
gi|157388908 hypothetical protein LOC54954 [Homo sapiens] 29 5.2
gi|72534732 dehydrogenase/reductase (SDR family) member 12 isofo... 29 6.7
gi|13375997 dehydrogenase/reductase (SDR family) member 12 isofo... 29 6.7
gi|62241046 exocyst complex component 7 isoform 1 [Homo sapiens] 28 8.8
gi|62241044 exocyst complex component 7 isoform 2 [Homo sapiens] 28 8.8
gi|223718053 exocyst complex component 7 isoform 6 [Homo sapiens] 28 8.8
gi|223718050 exocyst complex component 7 isoform 5 [Homo sapiens] 28 8.8
gi|223718046 exocyst complex component 7 isoform 4 [Homo sapiens] 28 8.8
gi|223718041 exocyst complex component 7 isoform 3 [Homo sapiens] 28 8.8
>gi|61102732 dynein 2 light intermediate chain isoform 3 [Homo
sapiens]
Length = 334
Score = 678 bits (1749), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP 60
MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP
Sbjct: 1 MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP 60
Query: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120
TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP
Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120
Query: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180
NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP
Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180
Query: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFG 240
LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFG
Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFG 240
Query: 241 IDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPK 300
IDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPK
Sbjct: 241 IDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPK 300
Query: 301 SINTLKDIKDPARDPQYAENEVDEMRIQKDLVLS 334
SINTLKDIKDPARDPQYAENEVDEMRIQKDLVLS
Sbjct: 301 SINTLKDIKDPARDPQYAENEVDEMRIQKDLVLS 334
>gi|40548413 dynein 2 light intermediate chain isoform 1 [Homo
sapiens]
Length = 351
Score = 674 bits (1739), Expect = 0.0
Identities = 332/333 (99%), Positives = 332/333 (99%)
Query: 1 MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP 60
MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP
Sbjct: 1 MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP 60
Query: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120
TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP
Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120
Query: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180
NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP
Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVP 180
Query: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFG 240
LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFG
Sbjct: 181 LVIIGSKYDVFQDFESEKRKVICKTLRFVAHYYGASLMFTSKSEALLLKIRGVINQLAFG 240
Query: 241 IDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPK 300
IDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPK
Sbjct: 241 IDKSKSICVDQNKPLFITAGLDSFGQIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPPK 300
Query: 301 SINTLKDIKDPARDPQYAENEVDEMRIQKDLVL 333
SINTLKDIKDPARDPQYAENEVDEMRIQKDL L
Sbjct: 301 SINTLKDIKDPARDPQYAENEVDEMRIQKDLEL 333
>gi|29824427 dynein 2 light intermediate chain isoform 2 [Homo
sapiens]
Length = 201
Score = 347 bits (890), Expect = 9e-96
Identities = 169/169 (100%), Positives = 169/169 (100%)
Query: 1 MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP 60
MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP
Sbjct: 1 MPSETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKP 60
Query: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120
TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP
Sbjct: 61 TLALEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120
Query: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP 169
NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP
Sbjct: 121 NDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHP 169
>gi|166795297 dynein, cytoplasmic 1, light intermediate chain 1
[Homo sapiens]
Length = 523
Score = 55.5 bits (132), Expect = 7e-08
Identities = 67/301 (22%), Positives = 115/301 (38%), Gaps = 48/301 (15%)
Query: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLA 63
+ LW +EV R + A K V +G GKT++I R + E K
Sbjct: 46 QNLWSCILSEVSTRSRSKLP------AGKNVLLLGEDGAGKTSLI-RKIQGIEEYKKGRG 98
Query: 64 LEYTYGRRAKGHNTPKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDL 123
LEY Y + + W L G L+ + +L+ ++LV+D+SKP
Sbjct: 99 LEYLYLNVHDEDRDDQTRCNVWILDGDLYHKGLLKFSLDAVSLKDTLVMLVVDMSKPWTA 158
Query: 124 WPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIW--------------------NN 163
+++ + HVDK+ K + + +M QK+ N
Sbjct: 159 LDSLQKWASVVREHVDKL-----KIPPEEMKQMEQKLIRDFQEYVEPGEDFPASPQRRNT 213
Query: 164 MPKDHPDHELIDPFP---------VPLVIIGSKYDVFQ------DFESEKRKVICKTLRF 208
++ D ++ P +P++++ +K D D+ E I +R
Sbjct: 214 ASQEDKDDSVVLPLGADTLTHNLGIPVLVVCTKCDAISVLEKEHDYRDEHFDFIQSHIRK 273
Query: 209 VAHYYGASLMFTS-KSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQI 267
YGA+L++TS K + + I Q +G V + +FI AG D+ +I
Sbjct: 274 FCLQYGAALIYTSVKENKNIDLVYKYIVQKLYGFPYKIPAVVVEKDAVFIPAGWDNDKKI 333
Query: 268 G 268
G
Sbjct: 334 G 334
>gi|5453634 dynein, cytoplasmic, light intermediate polypeptide 2
[Homo sapiens]
Length = 492
Score = 51.2 bits (121), Expect = 1e-06
Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 44/294 (14%)
Query: 4 ETLWEIAKAEVEKRGINGSEGDGAEIAEKFVFFIGSKNGGKTTIILRCLDRDEPPKPTLA 63
++LW +EV R + K + G GKTT++ + L E K
Sbjct: 33 QSLWSSILSEVSTRARSKLPSG------KNILVFGEDGSGKTTLMTK-LQGAEHGKKGRG 85
Query: 64 LEYTYGRRAKGHNTPKDI---AHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKP 120
LEY Y H+ +D + W L G L+ ++ ++L ++ V D+S+P
Sbjct: 86 LEYLY---LSVHDEDRDDHTRCNVWILDGDLYHKGLLKFAVSAESLPETLVIFVADMSRP 142
Query: 121 NDLWPTMENLLQATKSHVDKVIM---KLGKTNAKAVSEMRQKI----------------- 160
+ +++ + H+DK+ + K+ + K V + + +
Sbjct: 143 WTVMESLQKWASVLREHIDKMKIPPEKMRELERKFVKDFQDYMEPEEGCQGSPQRRGPLT 202
Query: 161 ----WNNMPKDHPDHELIDPFPVPLVIIGSKYDVF------QDFESEKRKVICKTLRFVA 210
N+ D+ L +P++++ +K D D+ E I LR
Sbjct: 203 SGSDEENVALPLGDNVLTHNLGIPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFC 262
Query: 211 HYYGASLMFTS-KSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDS 263
YGA+L++TS K E L + I +G + V + +FI AG D+
Sbjct: 263 LQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFHFTTPALVVEKDAVFIPAGWDN 316
>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
sapiens]
Length = 4515
Score = 30.8 bits (68), Expect = 1.8
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
Query: 78 PKDIAHFWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSH 137
P+ I WE G + +LI++ T +L++ + SK + + +LL+
Sbjct: 4104 PEAIRSCWETQGEKFIENLIAMQ---PKTTTANLMIRPEQSKDELVMEILSDLLKRLPLT 4160
Query: 138 VDKVIMKLGKTNAKAVSEMRQKIWNNMPKDHPDHELIDPFPVPLVIIGSKYDVFQDFESE 197
V+K + +G T + S M IW ++ K+ DH+ PL+ + V F +
Sbjct: 4161 VEKEEIAVG-TPSTLKSMMSSSIWESLSKNLKDHD-------PLI-----HCVLLTFLKQ 4207
Query: 198 KRKVICKTLRFVAHYYGASLMFTSKSEALL 227
+ K K L FV H L K E +L
Sbjct: 4208 EIKRFDKLL-FVIHKSLKDLQLAIKGEIIL 4236
>gi|239753192 PREDICTED: hypothetical protein [Homo sapiens]
Length = 331
Score = 30.8 bits (68), Expect = 1.8
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 6 LWEIAKA---EVEKRGINGSEGDGAEIAEKFVFFIGSKNGGK-----TTIILRCLDRDEP 57
+W + KA E +++G + G G F F+G +NGG+ ++ R R P
Sbjct: 201 VWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRDGACSIEVLPRTSGRTHP 260
Query: 58 PKPTLALEYTYGRRAKG 74
E G RA G
Sbjct: 261 APAPCLREAASGLRAAG 277
>gi|239747766 PREDICTED: hypothetical protein [Homo sapiens]
Length = 331
Score = 30.8 bits (68), Expect = 1.8
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 6 LWEIAKA---EVEKRGINGSEGDGAEIAEKFVFFIGSKNGGK-----TTIILRCLDRDEP 57
+W + KA E +++G + G G F F+G +NGG+ ++ R R P
Sbjct: 201 VWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRDGACSIEVLPRTSGRTHP 260
Query: 58 PKPTLALEYTYGRRAKG 74
E G RA G
Sbjct: 261 APAPCLREAASGLRAAG 277
>gi|239741632 PREDICTED: hypothetical protein XP_002342252 [Homo
sapiens]
Length = 494
Score = 30.8 bits (68), Expect = 1.8
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 6 LWEIAKA---EVEKRGINGSEGDGAEIAEKFVFFIGSKNGGK-----TTIILRCLDRDEP 57
+W + KA E +++G + G G F F+G +NGG+ ++ R R P
Sbjct: 364 VWTLEKAVLPEKDRKGKRITRGSGTTFTCHFFLFLGRENGGRDGACSIEVLPRTSGRTHP 423
Query: 58 PKPTLALEYTYGRRAKG 74
E G RA G
Sbjct: 424 APAPCLREAASGLRAAG 440
>gi|4885221 v-ets erythroblastosis virus E26 oncogene homolog 2
[Homo sapiens]
Length = 469
Score = 30.4 bits (67), Expect = 2.3
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 216 SLMFTSKSEALLLKIRGVINQLAFGIDKSKSICVDQNKPL-----FITAGLDSFGQIGSP 270
SL+ + S++ LL ++ V + +F D S+S+C+ NKP +I D Q G P
Sbjct: 291 SLLQSWNSQSSLLDVQRVPSFESFEDDCSQSLCL--NKPTMSFKDYIQERSDPVEQ-GKP 347
Query: 271 PVPENDIGKLHAHSPMELWKKVYEKL 296
+P + P++LW+ + E L
Sbjct: 348 VIPAAVLAGFTGSGPIQLWQFLLELL 373
>gi|215598561 enhancer of mRNA decapping 3 [Homo sapiens]
Length = 508
Score = 29.3 bits (64), Expect = 5.2
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 212 YYGASLMFTSKSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP 271
+Y A++ + +++ A +L I ++++ GID S+ + PL AG IG P
Sbjct: 424 WYKAAVAWANQNRAPVLSIDPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQ 483
Query: 272 VPENDIGKLHAHSP 285
++G ++ HSP
Sbjct: 484 QVFQEVG-INYHSP 496
>gi|215598545 enhancer of mRNA decapping 3 [Homo sapiens]
Length = 508
Score = 29.3 bits (64), Expect = 5.2
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 212 YYGASLMFTSKSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP 271
+Y A++ + +++ A +L I ++++ GID S+ + PL AG IG P
Sbjct: 424 WYKAAVAWANQNRAPVLSIDPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQ 483
Query: 272 VPENDIGKLHAHSP 285
++G ++ HSP
Sbjct: 484 QVFQEVG-INYHSP 496
>gi|19923613 enhancer of mRNA decapping 3 [Homo sapiens]
Length = 508
Score = 29.3 bits (64), Expect = 5.2
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 212 YYGASLMFTSKSEALLLKIRGVINQLAFGIDKSKSICVDQNKPLFITAGLDSFGQIGSPP 271
+Y A++ + +++ A +L I ++++ GID S+ + PL AG IG P
Sbjct: 424 WYKAAVAWANQNRAPVLSIDPPVHEVEQGIDAKWSLALGLPLPLGEHAGRIYLCDIGIPQ 483
Query: 272 VPENDIGKLHAHSP 285
++G ++ HSP
Sbjct: 484 QVFQEVG-INYHSP 496
>gi|157388908 hypothetical protein LOC54954 [Homo sapiens]
Length = 1096
Score = 29.3 bits (64), Expect = 5.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 266 QIGSPPVPENDIGKLHAHSPMELWKKVYEKLFPP 299
++G+PP+P N +G + A PM + + +PP
Sbjct: 425 RLGNPPLPRNQVGTISAGKPMFSHQVPQKVKYPP 458
>gi|72534732 dehydrogenase/reductase (SDR family) member 12 isoform
1 [Homo sapiens]
Length = 271
Score = 28.9 bits (63), Expect = 6.7
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 84 FWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHV 138
FW L +L + + + + + ++DLS P +W +EN Q K HV
Sbjct: 22 FWSLEETAALAKQLPLKSPSENI----FLHIVDLSDPKQIWKFVENFKQEHKLHV 72
>gi|13375997 dehydrogenase/reductase (SDR family) member 12 isoform
2 [Homo sapiens]
Length = 242
Score = 28.9 bits (63), Expect = 6.7
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Query: 84 FWELGGGTSLLDLISIPITGDTLRTFSLVLVLDLSKPNDLWPTMENLLQATKSHV 138
FW L +L + + + + + ++DLS P +W +EN Q K HV
Sbjct: 22 FWSLEETAALAKQLPLKSPSENI----FLHIVDLSDPKQIWKFVENFKQEHKLHV 72
>gi|62241046 exocyst complex component 7 isoform 1 [Homo sapiens]
Length = 684
Score = 28.5 bits (62), Expect = 8.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 106 LRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWN--- 162
L F ++ L +KP + ++ +TK+ + +I + AKA+ + I N
Sbjct: 379 LTVFPILRHLKQTKP-EFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPD 437
Query: 163 ---NMPKDHPDHEL 173
NMPKD HEL
Sbjct: 438 KEYNMPKDGTVHEL 451
>gi|62241044 exocyst complex component 7 isoform 2 [Homo sapiens]
Length = 653
Score = 28.5 bits (62), Expect = 8.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 106 LRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWN--- 162
L F ++ L +KP + ++ +TK+ + +I + AKA+ + I N
Sbjct: 348 LTVFPILRHLKQTKP-EFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPD 406
Query: 163 ---NMPKDHPDHEL 173
NMPKD HEL
Sbjct: 407 KEYNMPKDGTVHEL 420
>gi|223718053 exocyst complex component 7 isoform 6 [Homo sapiens]
Length = 707
Score = 28.5 bits (62), Expect = 8.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 106 LRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWN--- 162
L F ++ L +KP + ++ +TK+ + +I + AKA+ + I N
Sbjct: 402 LTVFPILRHLKQTKP-EFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPD 460
Query: 163 ---NMPKDHPDHEL 173
NMPKD HEL
Sbjct: 461 KEYNMPKDGTVHEL 474
>gi|223718050 exocyst complex component 7 isoform 5 [Homo sapiens]
Length = 676
Score = 28.5 bits (62), Expect = 8.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 106 LRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWN--- 162
L F ++ L +KP + ++ +TK+ + +I + AKA+ + I N
Sbjct: 371 LTVFPILRHLKQTKP-EFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPD 429
Query: 163 ---NMPKDHPDHEL 173
NMPKD HEL
Sbjct: 430 KEYNMPKDGTVHEL 443
>gi|223718046 exocyst complex component 7 isoform 4 [Homo sapiens]
Length = 735
Score = 28.5 bits (62), Expect = 8.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 106 LRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWN--- 162
L F ++ L +KP + ++ +TK+ + +I + AKA+ + I N
Sbjct: 430 LTVFPILRHLKQTKP-EFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPD 488
Query: 163 ---NMPKDHPDHEL 173
NMPKD HEL
Sbjct: 489 KEYNMPKDGTVHEL 502
>gi|223718041 exocyst complex component 7 isoform 3 [Homo sapiens]
Length = 656
Score = 28.5 bits (62), Expect = 8.8
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 106 LRTFSLVLVLDLSKPNDLWPTMENLLQATKSHVDKVIMKLGKTNAKAVSEMRQKIWN--- 162
L F ++ L +KP + ++ +TK+ + +I + AKA+ + I N
Sbjct: 338 LTVFPILRHLKQTKP-EFDQVLQGTAASTKNKLPGLITSMETIGAKALEDFADNIKNDPD 396
Query: 163 ---NMPKDHPDHEL 173
NMPKD HEL
Sbjct: 397 KEYNMPKDGTVHEL 410
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.137 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,353,493
Number of Sequences: 37866
Number of extensions: 602013
Number of successful extensions: 1295
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1286
Number of HSP's gapped (non-prelim): 27
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.