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Search of human proteins with 6005854
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6005854 prohibitin 2 isoform 2 [Homo sapiens]
(299 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6005854 prohibitin 2 isoform 2 [Homo sapiens] 570 e-163
gi|221307584 prohibitin 2 isoform 1 [Homo sapiens] 570 e-163
gi|4505773 prohibitin [Homo sapiens] 257 8e-69
gi|38016911 stomatin isoform a [Homo sapiens] 45 1e-04
gi|221316744 stomatin-like 3 isoform 2 [Homo sapiens] 40 0.002
gi|21686995 stomatin-like 3 isoform 1 [Homo sapiens] 40 0.002
gi|154800489 ER lipid raft associated 1 [Homo sapiens] 36 0.036
gi|154800487 ER lipid raft associated 1 [Homo sapiens] 36 0.036
gi|167614504 laminin, beta 1 precursor [Homo sapiens] 35 0.080
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 35 0.080
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 35 0.080
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 35 0.080
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 35 0.080
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 35 0.080
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 35 0.080
gi|5031699 flotillin 1 [Homo sapiens] 35 0.10
gi|6005721 ER lipid raft associated 2 isoform 1 [Homo sapiens] 34 0.18
gi|21735548 centrosomal protein 2 [Homo sapiens] 34 0.18
gi|56550043 sarcolemma associated protein [Homo sapiens] 32 0.68
gi|215982794 myosin VA isoform 2 [Homo sapiens] 32 0.89
gi|215982791 myosin VA isoform 1 [Homo sapiens] 32 0.89
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 32 0.89
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 32 0.89
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 32 0.89
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 32 0.89
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 32 0.89
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 32 0.89
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 32 0.89
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 32 0.89
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 32 0.89
>gi|6005854 prohibitin 2 isoform 2 [Homo sapiens]
Length = 299
Score = 570 bits (1469), Expect = e-163
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MAQNLKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQQ 60
MAQNLKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQQ
Sbjct: 1 MAQNLKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQQ 60
Query: 61 DTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSM 120
DTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSM
Sbjct: 61 DTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSM 120
Query: 121 YQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILD 180
YQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILD
Sbjct: 121 YQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILD 180
Query: 181 DVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGE 240
DVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGE
Sbjct: 181 DVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGE 240
Query: 241 ALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQDESFTRGSDSLIKGKK 299
ALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQDESFTRGSDSLIKGKK
Sbjct: 241 ALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQDESFTRGSDSLIKGKK 299
>gi|221307584 prohibitin 2 isoform 1 [Homo sapiens]
Length = 299
Score = 570 bits (1469), Expect = e-163
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MAQNLKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQQ 60
MAQNLKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQQ
Sbjct: 1 MAQNLKDLAGRLPAGPRGMGTALKLLLGAGAVAYGVRESVFTVEGGHRAIFFNRIGGVQQ 60
Query: 61 DTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSM 120
DTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSM
Sbjct: 61 DTILAEGLHFRIPWFQYPIIYDIRARPRKISSPTGSKDLQMVNISLRVLSRPNAQELPSM 120
Query: 121 YQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILD 180
YQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILD
Sbjct: 121 YQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILD 180
Query: 181 DVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGE 240
DVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGE
Sbjct: 181 DVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGE 240
Query: 241 ALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQDESFTRGSDSLIKGKK 299
ALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQDESFTRGSDSLIKGKK
Sbjct: 241 ALSKNPGYIKLRKIRAAQNISKTIATSQNRIYLTADNLVLNLQDESFTRGSDSLIKGKK 299
>gi|4505773 prohibitin [Homo sapiens]
Length = 272
Score = 257 bits (657), Expect = 8e-69
Identities = 136/252 (53%), Positives = 188/252 (74%), Gaps = 3/252 (1%)
Query: 31 AVAYGVRES-VFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRARPRK 89
AVA GV S ++ V+ GHRA+ F+R GVQ D ++ EG HF IPW Q PII+D R+RPR
Sbjct: 17 AVAGGVVNSALYNVDAGHRAVIFDRFRGVQ-DIVVGEGTHFLIPWVQKPIIFDCRSRPRN 75
Query: 90 ISSPTGSKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFN 149
+ TGSKDLQ VNI+LR+L RP A +LP ++ +G DY+ERVLPSI E+LKSVVA+F+
Sbjct: 76 VPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFD 135
Query: 150 ASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQR 209
A +LITQR VS + +LTERA F LILDDV++T L+F +E+T AVEAKQVAQQEA+R
Sbjct: 136 AGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAER 195
Query: 210 AQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEAL-SKNPGYIKLRKIRAAQNISKTIATSQ 268
A+F+VEKA+Q+++ I+ AEG+++AA+++ +L + G I+LRK+ AA++I+ ++ S+
Sbjct: 196 ARFVVEKAEQQKKAAIISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSR 255
Query: 269 NRIYLTADNLVL 280
N YL A VL
Sbjct: 256 NITYLPAGQSVL 267
>gi|38016911 stomatin isoform a [Homo sapiens]
Length = 288
Score = 44.7 bits (104), Expect = 1e-04
Identities = 52/222 (23%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 48 RAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRA-----RPRKISSPTGSKDLQMV 102
RAI F R+G + Q GL F +P I D+R P++I + KD +
Sbjct: 62 RAIIF-RLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILT----KDSVTI 116
Query: 103 NISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSL 162
++ V R L ++ D R+L L++V+ N SQ+++ R +++
Sbjct: 117 SVDGVVYYRVQNATL-AVANITNADSATRLL---AQTTLRNVLGTKNLSQILSDREEIAH 172
Query: 163 LIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQR 222
++ L + + + ++ V I ++ + QRA +A +E R
Sbjct: 173 NMQSTLDDATDAWGIKVERVEIKDVKLP--------------VQLQRAMAAEAEASREAR 218
Query: 223 QKIVQAEGEAEAAKMLGEA---LSKNPGYIKLRKIRAAQNIS 261
K++ AEGE A++ L EA ++++P ++LR ++ I+
Sbjct: 219 AKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIA 260
>gi|221316744 stomatin-like 3 isoform 2 [Homo sapiens]
Length = 282
Score = 40.4 bits (93), Expect = 0.002
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 48 RAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRA-----RPRKISSPTGSKDLQMV 102
RA+ F R+G +Q D GL +P + D+R P++I +
Sbjct: 50 RAVVF-RLGRIQADKAKGPGLILVLPCIDVFVKVDLRTVTCNIPPQEILTRDSVTTQVDG 108
Query: 103 NISLRVLSRPNA-QELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVS 161
+ R+ S +A + ++Q L + L++V+ SQ++ R ++
Sbjct: 109 VVYYRIYSAVSAVANVNDVHQATFL---------LAQTTLRNVLGTQTLSQILAGREEI- 158
Query: 162 LLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVA-QQEAQRAQFLVEKAKQE 220
A +LDD TEL R A VE K V + QR+ +A +E
Sbjct: 159 ----------AHSIQTLLDDA--TELWGIR--VARVEIKDVRIPVQLQRSMAAEAEATRE 204
Query: 221 QRQKIVQAEGEAEAAKMLGEA---LSKNPGYIKLRKIRAAQNISKTIATSQN 269
R K++ AEGE A+K L A L+++P ++LR ++ T+AT +N
Sbjct: 205 ARAKVLAAEGEMNASKSLKSASMVLAESPIALQLRYLQTL----STVATEKN 252
>gi|21686995 stomatin-like 3 isoform 1 [Homo sapiens]
Length = 291
Score = 40.4 bits (93), Expect = 0.002
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 48 RAIFFNRIGGVQQDTILAEGLHFRIPWFQYPIIYDIRA-----RPRKISSPTGSKDLQMV 102
RA+ F R+G +Q D GL +P + D+R P++I +
Sbjct: 59 RAVVF-RLGRIQADKAKGPGLILVLPCIDVFVKVDLRTVTCNIPPQEILTRDSVTTQVDG 117
Query: 103 NISLRVLSRPNA-QELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVS 161
+ R+ S +A + ++Q L + L++V+ SQ++ R ++
Sbjct: 118 VVYYRIYSAVSAVANVNDVHQATFL---------LAQTTLRNVLGTQTLSQILAGREEI- 167
Query: 162 LLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVA-QQEAQRAQFLVEKAKQE 220
A +LDD TEL R A VE K V + QR+ +A +E
Sbjct: 168 ----------AHSIQTLLDDA--TELWGIR--VARVEIKDVRIPVQLQRSMAAEAEATRE 213
Query: 221 QRQKIVQAEGEAEAAKMLGEA---LSKNPGYIKLRKIRAAQNISKTIATSQN 269
R K++ AEGE A+K L A L+++P ++LR ++ T+AT +N
Sbjct: 214 ARAKVLAAEGEMNASKSLKSASMVLAESPIALQLRYLQTL----STVATEKN 261
>gi|154800489 ER lipid raft associated 1 [Homo sapiens]
Length = 348
Score = 36.2 bits (82), Expect = 0.036
Identities = 43/226 (19%), Positives = 97/226 (42%), Gaps = 14/226 (6%)
Query: 21 TALKLLLGA--GAVAYGVRESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYP 78
T ++L+ A G VA + S+ +E GH A+++ GG + G H +P+
Sbjct: 4 TQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYR--GGALLTSPSGPGYHIMLPFITTF 61
Query: 79 IIYDIRARPRKISS-PTGSKDLQMVNIS-LRVLSRPNAQELPSMYQRLGLDYEERVLPSI 136
+ ++ + P G+ M+ I + V++ + + + DY++ ++ +
Sbjct: 62 RSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNK 121
Query: 137 VNEVLKSVVAKFNASQLITQRA-QVSLLIRRELTERAKDFSLILDDVAITELSFSREYTA 195
++ L + ++ + Q+ +++ L KD +L+ + I + ++
Sbjct: 122 IHHELNQFCSAHTLQEVYIELFDQIDENLKQALQ---KDLNLMAPGLTIQAVRVTKPKIP 178
Query: 196 AVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEA 241
+ EA++ + L+ Q+QK+V+ E E E K + EA
Sbjct: 179 EAIRRNFELMEAEKTKLLIAA----QKQKVVEKEAETERKKAVIEA 220
>gi|154800487 ER lipid raft associated 1 [Homo sapiens]
Length = 348
Score = 36.2 bits (82), Expect = 0.036
Identities = 43/226 (19%), Positives = 97/226 (42%), Gaps = 14/226 (6%)
Query: 21 TALKLLLGA--GAVAYGVRESVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWFQYP 78
T ++L+ A G VA + S+ +E GH A+++ GG + G H +P+
Sbjct: 4 TQARVLVAAVVGLVAVLLYASIHKIEEGHLAVYYR--GGALLTSPSGPGYHIMLPFITTF 61
Query: 79 IIYDIRARPRKISS-PTGSKDLQMVNIS-LRVLSRPNAQELPSMYQRLGLDYEERVLPSI 136
+ ++ + P G+ M+ I + V++ + + + DY++ ++ +
Sbjct: 62 RSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVVNMLAPYAVFDIVRNYTADYDKTLIFNK 121
Query: 137 VNEVLKSVVAKFNASQLITQRA-QVSLLIRRELTERAKDFSLILDDVAITELSFSREYTA 195
++ L + ++ + Q+ +++ L KD +L+ + I + ++
Sbjct: 122 IHHELNQFCSAHTLQEVYIELFDQIDENLKQALQ---KDLNLMAPGLTIQAVRVTKPKIP 178
Query: 196 AVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEA 241
+ EA++ + L+ Q+QK+V+ E E E K + EA
Sbjct: 179 EAIRRNFELMEAEKTKLLIAA----QKQKVVEKEAETERKKAVIEA 220
>gi|167614504 laminin, beta 1 precursor [Homo sapiens]
Length = 1786
Score = 35.0 bits (79), Expect = 0.080
Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 23/206 (11%)
Query: 96 SKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLIT 155
S DL + + + P Q L D ERV E L V S
Sbjct: 1515 SADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERV------ESLSQVEVILQHSAADI 1568
Query: 156 QRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVE 215
RA++ L + ++ A D + D V + AA +A + A ++ Q Q L+
Sbjct: 1569 ARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQGTQNLLT 1628
Query: 216 KAKQEQR----------QKIVQAEGEAEAAKMLGEALSKNPGYIKLRKI-----RAAQNI 260
+ E Q+I + E E K S YI+ K+ ++A+++
Sbjct: 1629 SIESETAASEETLFNASQRISELERNVEELKRKAAQNSGEAEYIE--KVVYTVKQSAEDV 1686
Query: 261 SKTIATSQNRIYLTADNLVLNLQDES 286
KT+ + Y +NL+ +ES
Sbjct: 1687 KKTLDGELDEKYKKVENLIAKKTEES 1712
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 35.0 bits (79), Expect = 0.080
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 97 KDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVV-AKFNASQL 153
K +Q+ N+S R + E+ S Y + ++NE+ LK +V A+ S
Sbjct: 686 KLMQLTNVS-RAKAEDALSEMKSQYSK------------VLNELTQLKQLVDAQKENSVS 732
Query: 154 ITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFL 213
IT+ QV +R E + S + + +A S+E A KQ+ +++A +
Sbjct: 733 ITEHLQVITTLRTAAKEMEEKISNLKEHLA------SKEVEVAKLEKQLLEEKAAMTDAM 786
Query: 214 VEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRA 256
V ++ E+ Q +++E A+K+ K + ++ +IR+
Sbjct: 787 VPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRS 829
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 35.0 bits (79), Expect = 0.080
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 97 KDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVV-AKFNASQL 153
K +Q+ N+S R + E+ S Y + ++NE+ LK +V A+ S
Sbjct: 675 KLMQLTNVS-RAKAEDALSEMKSQYSK------------VLNELTQLKQLVDAQKENSVS 721
Query: 154 ITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFL 213
IT+ QV +R E + S + + +A S+E A KQ+ +++A +
Sbjct: 722 ITEHLQVITTLRTAAKEMEEKISNLKEHLA------SKEVEVAKLEKQLLEEKAAMTDAM 775
Query: 214 VEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRA 256
V ++ E+ Q +++E A+K+ K + ++ +IR+
Sbjct: 776 VPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRS 818
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 35.0 bits (79), Expect = 0.080
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 97 KDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVV-AKFNASQL 153
K +Q+ N+S R + E+ S Y + ++NE+ LK +V A+ S
Sbjct: 654 KLMQLTNVS-RAKAEDALSEMKSQYSK------------VLNELTQLKQLVDAQKENSVS 700
Query: 154 ITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFL 213
IT+ QV +R E + S + + +A S+E A KQ+ +++A +
Sbjct: 701 ITEHLQVITTLRTAAKEMEEKISNLKEHLA------SKEVEVAKLEKQLLEEKAAMTDAM 754
Query: 214 VEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRA 256
V ++ E+ Q +++E A+K+ K + ++ +IR+
Sbjct: 755 VPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRS 797
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 35.0 bits (79), Expect = 0.080
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 97 KDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVV-AKFNASQL 153
K +Q+ N+S R + E+ S Y + ++NE+ LK +V A+ S
Sbjct: 683 KLMQLTNVS-RAKAEDALSEMKSQYSK------------VLNELTQLKQLVDAQKENSVS 729
Query: 154 ITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFL 213
IT+ QV +R E + S + + +A S+E A KQ+ +++A +
Sbjct: 730 ITEHLQVITTLRTAAKEMEEKISNLKEHLA------SKEVEVAKLEKQLLEEKAAMTDAM 783
Query: 214 VEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRA 256
V ++ E+ Q +++E A+K+ K + ++ +IR+
Sbjct: 784 VPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRS 826
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 35.0 bits (79), Expect = 0.080
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 97 KDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVV-AKFNASQL 153
K +Q+ N+S R + E+ S Y + ++NE+ LK +V A+ S
Sbjct: 683 KLMQLTNVS-RAKAEDALSEMKSQYSK------------VLNELTQLKQLVDAQKENSVS 729
Query: 154 ITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFL 213
IT+ QV +R E + S + + +A S+E A KQ+ +++A +
Sbjct: 730 ITEHLQVITTLRTAAKEMEEKISNLKEHLA------SKEVEVAKLEKQLLEEKAAMTDAM 783
Query: 214 VEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRA 256
V ++ E+ Q +++E A+K+ K + ++ +IR+
Sbjct: 784 VPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRS 826
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 35.0 bits (79), Expect = 0.080
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 97 KDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVV-AKFNASQL 153
K +Q+ N+S R + E+ S Y + ++NE+ LK +V A+ S
Sbjct: 683 KLMQLTNVS-RAKAEDALSEMKSQYSK------------VLNELTQLKQLVDAQKENSVS 729
Query: 154 ITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFL 213
IT+ QV +R E + S + + +A S+E A KQ+ +++A +
Sbjct: 730 ITEHLQVITTLRTAAKEMEEKISNLKEHLA------SKEVEVAKLEKQLLEEKAAMTDAM 783
Query: 214 VEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRA 256
V ++ E+ Q +++E A+K+ K + ++ +IR+
Sbjct: 784 VPRSSYEKLQSSLESEVSVLASKLKESVKEKEKVHSEVVQIRS 826
>gi|5031699 flotillin 1 [Homo sapiens]
Length = 427
Score = 34.7 bits (78), Expect = 0.10
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 155 TQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQE-------- 206
T+RAQ L + ++ + + V + E R AV+ +++A++E
Sbjct: 229 TRRAQADLAYQLQVAKTKQQIEEQRVQVQVVE----RAQQVAVQEQEIARREKELEARVR 284
Query: 207 --AQRAQFLVEK-AKQEQRQKIVQAEGEAEAAKMLGEA 241
A+ ++ +E+ A+ E+ Q I+QAE EA + +M GEA
Sbjct: 285 KPAEAERYKLERLAEAEKSQLIMQAEAEAASVRMRGEA 322
>gi|6005721 ER lipid raft associated 2 isoform 1 [Homo sapiens]
Length = 339
Score = 33.9 bits (76), Expect = 0.18
Identities = 44/248 (17%), Positives = 105/248 (42%), Gaps = 20/248 (8%)
Query: 39 SVFTVEGGHRAIFFNRIGGVQQDTILAEGLHFRIPWF-QYPIIYDIRARPRKISSPTGSK 97
+V +E GH +++ GG + G H +P+ Y + + P G+
Sbjct: 22 AVHKIEEGHIGVYYR--GGALLTSTSGPGFHLMLPFITSYKSVQTTLQTDEVKNVPCGTS 79
Query: 98 DLQMV---NISLRVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLI 154
M+ I + PNA + + + DY++ ++ + ++ L + ++
Sbjct: 80 GGVMIYFDRIEVVNFLVPNA--VYDIVKNYTADYDKALIFNKIHHELNQFCSVHTLQEVY 137
Query: 155 TQR-----AQVSLLIRRELTERAKDFSLILDDVAITELSFS----REYTAAVEAKQVAQQ 205
+ + L ++++LT A L++ V +T+ + R Y K
Sbjct: 138 IELFDQIDENLKLALQQDLTSMAP--GLVIQAVRVTKPNIPEAIRRNYELMESEKTKLLI 195
Query: 206 EAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKM-LGEALSKNPGYIKLRKIRAAQNISKTI 264
AQ+ + + ++A+ E+++ +++AE A+ A++ G+ + + K+ +I A +++
Sbjct: 196 AAQKQKVVEKEAETERKKALIEAEKVAQVAEITYGQKVMEKETEKKISEIEDAAFLAREK 255
Query: 265 ATSQNRIY 272
A + Y
Sbjct: 256 AKADAECY 263
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 33.9 bits (76), Expect = 0.18
Identities = 29/151 (19%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 82 DIRARPRKISSPTG--SKDLQMVNISLRVLSRPNAQELPSMYQRLGLDYEERV-LPSIVN 138
D++ + K TG LQ L+ +R + +L ++ + ++++ L V
Sbjct: 954 DMKVQKLKEQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVE 1013
Query: 139 EVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVE 198
++ +VA+ ++ +L+ Q Q L +E K+ + ++ + + E
Sbjct: 1014 DLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQE 1073
Query: 199 AKQVAQQEAQRAQFLVEKAKQEQRQKIVQAE 229
A + QQE + +++A+ EQ++ Q E
Sbjct: 1074 ADSIRQQELSALRQDMQEAQGEQKELSAQME 1104
Score = 30.0 bits (66), Expect = 2.6
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 19/179 (10%)
Query: 79 IIYDIRARPRKISSPTGSKDLQMVNISLRV----------LSRPNAQEL--PSMYQRLGL 126
++ D R R KI +DL+ + +SLR L + A+E PS QR L
Sbjct: 1669 VLEDQRTRQTKILE----EDLEQIKLSLRERGRELTTQRQLMQERAEEGKGPSKAQRGSL 1724
Query: 127 DYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITE 186
++ + +L EV +L Q Q + R++ E + S ++ + +
Sbjct: 1725 EHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQ 1784
Query: 187 --LSFSREYTAAVEAKQVAQ-QEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKMLGEAL 242
L +RE E +Q EAQRA ++ + +Q+ QA+G+ E K +AL
Sbjct: 1785 QQLQEAREQGELKEQSLQSQLDEAQRALAQRDQELEALQQEQQQAQGQEERVKEKADAL 1843
>gi|56550043 sarcolemma associated protein [Homo sapiens]
Length = 811
Score = 32.0 bits (71), Expect = 0.68
Identities = 40/192 (20%), Positives = 78/192 (40%), Gaps = 14/192 (7%)
Query: 110 SRPNAQELPSMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIR---R 166
S Q L + QRL +D E + E S + +L++ R ++ LL + +
Sbjct: 524 STKQIQVLQAQLQRLHIDTEN------LREEKDSEITS-TRDELLSARDEILLLHQAAAK 576
Query: 167 ELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIV 226
+ER D + + +++ R AA E ++ Q ++ + +QR++
Sbjct: 577 VASERDTDIASLQEELKKVRAELERWRKAASEYEKEITSLQNSFQLRCQQCEDQQREEAT 636
Query: 227 QAEGEAEAAKMLGEALSKNPGYIKLRKIRAA---QNISKTIATSQNR-IYLTADNLVLNL 282
+ +GE E + AL +K + + Q K + SQ + + LT+D +L +
Sbjct: 637 RLQGELEKLRKEWNALETECHSLKRENVLLSSELQRQEKELHNSQKQSLELTSDLSILQM 696
Query: 283 QDESFTRGSDSL 294
+ SL
Sbjct: 697 SRKELENQVGSL 708
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 31.6 bits (70), Expect = 0.89
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 187 LSFSREYTAAVEAKQVAQQEAQRA--QFLVEKAKQEQRQKIVQAEGEAEAAK 236
L + T + KQV Q E R Q L KAK+E+R +I AE E E+ K
Sbjct: 1156 LKLQKRVTELEQEKQVMQDELDRKEEQVLRSKAKEEERPQIRGAELEYESLK 1207
>gi|215982791 myosin VA isoform 1 [Homo sapiens]
Length = 1855
Score = 31.6 bits (70), Expect = 0.89
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 187 LSFSREYTAAVEAKQVAQQEAQRA--QFLVEKAKQEQRQKIVQAEGEAEAAK 236
L + T + KQV Q E R Q L KAK+E+R +I AE E E+ K
Sbjct: 1156 LKLQKRVTELEQEKQVMQDELDRKEEQVLRSKAKEEERPQIRGAELEYESLK 1207
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 31.6 bits (70), Expect = 0.89
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 152 QLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQ 211
+L + R Q+ L + + A++ +LIL D T+ E A + KQVA++ A+ +
Sbjct: 2229 ELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEE---AEKMKQVAEEAARLSV 2285
Query: 212 FLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
E A+ Q + A+ A A KML E + +L+ K +A Q R
Sbjct: 2286 AAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQAR 2344
Score = 30.0 bits (66), Expect = 2.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 107 RVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVVAKFNASQLITQRAQVSLLI 164
RV A+E + ++ L+ ER L + V E L+ + +A QL Q AQ +
Sbjct: 1989 RVQKSLAAEEEAARQRKAALEEVER-LKAKVEEARRLRERAEQESARQL--QLAQEAAQK 2045
Query: 165 RRELTERAKDFSLI-----LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQ 219
R + E+A F++ L E S + EA + A +EA+ A+ E+
Sbjct: 2046 RLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAA 2105
Query: 220 EQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQ 268
+ R+++ +AE ++A+ +A ++ + + A Q ++ Q
Sbjct: 2106 QSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQ 2154
Score = 28.5 bits (62), Expect = 7.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 186 ELSFSREYTAAVEA-KQVAQQEAQRAQFLVEKAKQEQRQKIVQ----AEGEAEAAKMLGE 240
EL R EA K+ AQ+EA+R + V+ Q +RQ V+ + EAEAA+
Sbjct: 1474 ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQR 1533
Query: 241 AL 242
AL
Sbjct: 1534 AL 1535
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 31.6 bits (70), Expect = 0.89
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 152 QLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQ 211
+L + R Q+ L + + A++ +LIL D T+ E A + KQVA++ A+ +
Sbjct: 2233 ELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEE---AEKMKQVAEEAARLSV 2289
Query: 212 FLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
E A+ Q + A+ A A KML E + +L+ K +A Q R
Sbjct: 2290 AAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQAR 2348
Score = 30.0 bits (66), Expect = 2.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 107 RVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVVAKFNASQLITQRAQVSLLI 164
RV A+E + ++ L+ ER L + V E L+ + +A QL Q AQ +
Sbjct: 1993 RVQKSLAAEEEAARQRKAALEEVER-LKAKVEEARRLRERAEQESARQL--QLAQEAAQK 2049
Query: 165 RRELTERAKDFSLI-----LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQ 219
R + E+A F++ L E S + EA + A +EA+ A+ E+
Sbjct: 2050 RLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAA 2109
Query: 220 EQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQ 268
+ R+++ +AE ++A+ +A ++ + + A Q ++ Q
Sbjct: 2110 QSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQ 2158
Score = 28.5 bits (62), Expect = 7.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 186 ELSFSREYTAAVEA-KQVAQQEAQRAQFLVEKAKQEQRQKIVQ----AEGEAEAAKMLGE 240
EL R EA K+ AQ+EA+R + V+ Q +RQ V+ + EAEAA+
Sbjct: 1478 ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQR 1537
Query: 241 AL 242
AL
Sbjct: 1538 AL 1539
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 31.6 bits (70), Expect = 0.89
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 152 QLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQ 211
+L + R Q+ L + + A++ +LIL D T+ E A + KQVA++ A+ +
Sbjct: 2229 ELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEE---AEKMKQVAEEAARLSV 2285
Query: 212 FLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
E A+ Q + A+ A A KML E + +L+ K +A Q R
Sbjct: 2286 AAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQAR 2344
Score = 30.0 bits (66), Expect = 2.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 107 RVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVVAKFNASQLITQRAQVSLLI 164
RV A+E + ++ L+ ER L + V E L+ + +A QL Q AQ +
Sbjct: 1989 RVQKSLAAEEEAARQRKAALEEVER-LKAKVEEARRLRERAEQESARQL--QLAQEAAQK 2045
Query: 165 RRELTERAKDFSLI-----LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQ 219
R + E+A F++ L E S + EA + A +EA+ A+ E+
Sbjct: 2046 RLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAA 2105
Query: 220 EQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQ 268
+ R+++ +AE ++A+ +A ++ + + A Q ++ Q
Sbjct: 2106 QSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQ 2154
Score = 28.5 bits (62), Expect = 7.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 186 ELSFSREYTAAVEA-KQVAQQEAQRAQFLVEKAKQEQRQKIVQ----AEGEAEAAKMLGE 240
EL R EA K+ AQ+EA+R + V+ Q +RQ V+ + EAEAA+
Sbjct: 1474 ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQR 1533
Query: 241 AL 242
AL
Sbjct: 1534 AL 1535
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 31.6 bits (70), Expect = 0.89
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 152 QLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQ 211
+L + R Q+ L + + A++ +LIL D T+ E A + KQVA++ A+ +
Sbjct: 2197 ELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEE---AEKMKQVAEEAARLSV 2253
Query: 212 FLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
E A+ Q + A+ A A KML E + +L+ K +A Q R
Sbjct: 2254 AAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQAR 2312
Score = 30.0 bits (66), Expect = 2.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 107 RVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVVAKFNASQLITQRAQVSLLI 164
RV A+E + ++ L+ ER L + V E L+ + +A QL Q AQ +
Sbjct: 1957 RVQKSLAAEEEAARQRKAALEEVER-LKAKVEEARRLRERAEQESARQL--QLAQEAAQK 2013
Query: 165 RRELTERAKDFSLI-----LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQ 219
R + E+A F++ L E S + EA + A +EA+ A+ E+
Sbjct: 2014 RLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAA 2073
Query: 220 EQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQ 268
+ R+++ +AE ++A+ +A ++ + + A Q ++ Q
Sbjct: 2074 QSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQ 2122
Score = 28.5 bits (62), Expect = 7.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 186 ELSFSREYTAAVEA-KQVAQQEAQRAQFLVEKAKQEQRQKIVQ----AEGEAEAAKMLGE 240
EL R EA K+ AQ+EA+R + V+ Q +RQ V+ + EAEAA+
Sbjct: 1442 ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQR 1501
Query: 241 AL 242
AL
Sbjct: 1502 AL 1503
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 31.6 bits (70), Expect = 0.89
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 152 QLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQ 211
+L + R Q+ L + + A++ +LIL D T+ E A + KQVA++ A+ +
Sbjct: 2366 ELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEE---AEKMKQVAEEAARLSV 2422
Query: 212 FLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
E A+ Q + A+ A A KML E + +L+ K +A Q R
Sbjct: 2423 AAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQAR 2481
Score = 30.0 bits (66), Expect = 2.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 107 RVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVVAKFNASQLITQRAQVSLLI 164
RV A+E + ++ L+ ER L + V E L+ + +A QL Q AQ +
Sbjct: 2126 RVQKSLAAEEEAARQRKAALEEVER-LKAKVEEARRLRERAEQESARQL--QLAQEAAQK 2182
Query: 165 RRELTERAKDFSLI-----LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQ 219
R + E+A F++ L E S + EA + A +EA+ A+ E+
Sbjct: 2183 RLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAA 2242
Query: 220 EQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQ 268
+ R+++ +AE ++A+ +A ++ + + A Q ++ Q
Sbjct: 2243 QSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQ 2291
Score = 28.5 bits (62), Expect = 7.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 186 ELSFSREYTAAVEA-KQVAQQEAQRAQFLVEKAKQEQRQKIVQ----AEGEAEAAKMLGE 240
EL R EA K+ AQ+EA+R + V+ Q +RQ V+ + EAEAA+
Sbjct: 1611 ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQR 1670
Query: 241 AL 242
AL
Sbjct: 1671 AL 1672
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 31.6 bits (70), Expect = 0.89
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 152 QLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQ 211
+L + R Q+ L + + A++ +LIL D T+ E A + KQVA++ A+ +
Sbjct: 2207 ELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEE---AEKMKQVAEEAARLSV 2263
Query: 212 FLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
E A+ Q + A+ A A KML E + +L+ K +A Q R
Sbjct: 2264 AAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQAR 2322
Score = 30.0 bits (66), Expect = 2.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 107 RVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVVAKFNASQLITQRAQVSLLI 164
RV A+E + ++ L+ ER L + V E L+ + +A QL Q AQ +
Sbjct: 1967 RVQKSLAAEEEAARQRKAALEEVER-LKAKVEEARRLRERAEQESARQL--QLAQEAAQK 2023
Query: 165 RRELTERAKDFSLI-----LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQ 219
R + E+A F++ L E S + EA + A +EA+ A+ E+
Sbjct: 2024 RLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAA 2083
Query: 220 EQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQ 268
+ R+++ +AE ++A+ +A ++ + + A Q ++ Q
Sbjct: 2084 QSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQ 2132
Score = 28.5 bits (62), Expect = 7.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 186 ELSFSREYTAAVEA-KQVAQQEAQRAQFLVEKAKQEQRQKIVQ----AEGEAEAAKMLGE 240
EL R EA K+ AQ+EA+R + V+ Q +RQ V+ + EAEAA+
Sbjct: 1452 ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQR 1511
Query: 241 AL 242
AL
Sbjct: 1512 AL 1513
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 31.6 bits (70), Expect = 0.89
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 152 QLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQ 211
+L + R Q+ L + + A++ +LIL D T+ E A + KQVA++ A+ +
Sbjct: 2215 ELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEE---AEKMKQVAEEAARLSV 2271
Query: 212 FLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
E A+ Q + A+ A A KML E + +L+ K +A Q R
Sbjct: 2272 AAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQAR 2330
Score = 30.0 bits (66), Expect = 2.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 107 RVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVVAKFNASQLITQRAQVSLLI 164
RV A+E + ++ L+ ER L + V E L+ + +A QL Q AQ +
Sbjct: 1975 RVQKSLAAEEEAARQRKAALEEVER-LKAKVEEARRLRERAEQESARQL--QLAQEAAQK 2031
Query: 165 RRELTERAKDFSLI-----LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQ 219
R + E+A F++ L E S + EA + A +EA+ A+ E+
Sbjct: 2032 RLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAA 2091
Query: 220 EQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQ 268
+ R+++ +AE ++A+ +A ++ + + A Q ++ Q
Sbjct: 2092 QSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQ 2140
Score = 28.5 bits (62), Expect = 7.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 186 ELSFSREYTAAVEA-KQVAQQEAQRAQFLVEKAKQEQRQKIVQ----AEGEAEAAKMLGE 240
EL R EA K+ AQ+EA+R + V+ Q +RQ V+ + EAEAA+
Sbjct: 1460 ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQR 1519
Query: 241 AL 242
AL
Sbjct: 1520 AL 1521
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 31.6 bits (70), Expect = 0.89
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 152 QLITQRAQVSLLIRRELTERAKDFSLILDDVAITELSFSREYTAAVEAKQVAQQEAQRAQ 211
+L + R Q+ L + + A++ +LIL D T+ E A + KQVA++ A+ +
Sbjct: 2256 ELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFLQEE---AEKMKQVAEEAARLSV 2312
Query: 212 FLVEKAKQEQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQNR 270
E A+ Q + A+ A A KML E + +L+ K +A Q R
Sbjct: 2313 AAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLKAEAELLQQQKELAQEQAR 2371
Score = 30.0 bits (66), Expect = 2.6
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 10/169 (5%)
Query: 107 RVLSRPNAQELPSMYQRLGLDYEERVLPSIVNEV--LKSVVAKFNASQLITQRAQVSLLI 164
RV A+E + ++ L+ ER L + V E L+ + +A QL Q AQ +
Sbjct: 2016 RVQKSLAAEEEAARQRKAALEEVER-LKAKVEEARRLRERAEQESARQL--QLAQEAAQK 2072
Query: 165 RRELTERAKDFSLI-----LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQ 219
R + E+A F++ L E S + EA + A +EA+ A+ E+
Sbjct: 2073 RLQAEEKAHAFAVQQKEQELQQTLQQEQSVLDQLRGEAEAARRAAEEAEEARVQAEREAA 2132
Query: 220 EQRQKIVQAEGEAEAAKMLGEALSKNPGYIKLRKIRAAQNISKTIATSQ 268
+ R+++ +AE ++A+ +A ++ + + A Q ++ Q
Sbjct: 2133 QSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAARRAQAEQ 2181
Score = 28.5 bits (62), Expect = 7.5
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 186 ELSFSREYTAAVEA-KQVAQQEAQRAQFLVEKAKQEQRQKIVQ----AEGEAEAAKMLGE 240
EL R EA K+ AQ+EA+R + V+ Q +RQ V+ + EAEAA+
Sbjct: 1501 ELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAEAEAAREKQR 1560
Query: 241 AL 242
AL
Sbjct: 1561 AL 1562
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 31.6 bits (70), Expect = 0.89
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 127 DYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLILDDVAITE 186
+ EE+++ ++ +VAK +L ++ + I RE+ R ++ I++ + E
Sbjct: 120 EIEEKLIEEETARRVEELVAKRVEEELEKRKDE----IEREVLRRVEEAKRIMEKQLLEE 175
Query: 187 LSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGE--AEAAKMLGE 240
L R+ A+ AQ+A+ E+AK+E+ ++I++ AEA L E
Sbjct: 176 LERQRQ----------AELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAE 221
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,104,875
Number of Sequences: 37866
Number of extensions: 356639
Number of successful extensions: 1921
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 1733
Number of HSP's gapped (non-prelim): 224
length of query: 299
length of database: 18,247,518
effective HSP length: 102
effective length of query: 197
effective length of database: 14,385,186
effective search space: 2833881642
effective search space used: 2833881642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.