Search of human proteins with 5803135

Search of human proteins with 5803135

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
         (201 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           406   e-114
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          212   2e-55
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   211   3e-55
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           201   5e-52
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   196   9e-51
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            196   9e-51
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            196   9e-51
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           196   9e-51
gi|16933567 mel transforming oncogene [Homo sapiens]                  194   3e-50
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      194   4e-50
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          175   2e-44
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]          174   3e-44
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]           174   5e-44
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]           171   4e-43
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 167   4e-42
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          167   6e-42
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          165   2e-41
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        164   4e-41
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]          164   6e-41
gi|4758996 Ras-related protein Rab-33A [Homo sapiens]                 160   9e-40
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   158   3e-39
gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]          157   4e-39
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]         155   3e-38
gi|50234889 RAB43 protein [Homo sapiens]                              154   4e-38
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         154   5e-38
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    153   8e-38
gi|116812567 RAB25 [Homo sapiens]                                     153   8e-38
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   152   2e-37
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           152   2e-37
gi|34485711 Ras-related protein Rab-27A [Homo sapiens]                149   2e-36

>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  406 bits (1043), Expect = e-114
 Identities = 201/201 (100%), Positives = 201/201 (100%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ
Sbjct: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGN 120
           IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGN
Sbjct: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDDVCRILVGN 120

Query: 121 KNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQ 180
           KNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQ
Sbjct: 121 KNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQ 180

Query: 181 QQQQNDVVKLTKNSKRKKRCC 201
           QQQQNDVVKLTKNSKRKKRCC
Sbjct: 181 QQQQNDVVKLTKNSKRKKRCC 201


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  212 bits (539), Expect = 2e-55
 Identities = 104/162 (64%), Positives = 132/162 (81%), Gaps = 1/162 (0%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           M  +YD+LFKLL+IGDSGVGKS LLLRFAD+T++ SYI+TIGVDFKIRT+E++G+ +KLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVG 119
           IWDTAGQERFRTITS+YYRG HG+IVVYDVT  ES+ NVK+WL EI++   ++V ++LVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120

Query: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
           NK+D   +KVV+   A +FA  +GI   ETSAK   NVE+ F
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAF 162


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  211 bits (537), Expect = 3e-55
 Identities = 109/202 (53%), Positives = 143/202 (70%), Gaps = 1/202 (0%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           M  +YD+LFKLL+IGDSGVGKS LLLRFAD+T++ SYI+TIGVDFKIRT+E++G+ +KLQ
Sbjct: 4   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVG 119
           IWDTAGQERFRTITS+YYRG HG+IVVYDVT  ESF NVK+WL EI++   ++V ++LVG
Sbjct: 64  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123

Query: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
           NK D   +KVV+   A +FA  +GI   ETSAK   NVE+ F  +   + +         
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183

Query: 180 QQQQQNDVVKLTKNSKRKKRCC 201
             ++ N  ++ T   +    CC
Sbjct: 184 GAEKSNVKIQSTPVKQSGGGCC 205


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  201 bits (510), Expect = 5e-52
 Identities = 94/170 (55%), Positives = 132/170 (77%), Gaps = 1/170 (0%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           MA+ YDHLFKLL+IGDSGVGK+ L++RFA++ F+ +YI+TIG+DFKIRTV+I G+K+KLQ
Sbjct: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
           +WDTAGQERF+TIT+ YYRG  G+I+VYD+T  +SF N++ W+  I +N    V R+L+G
Sbjct: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120

Query: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVL 169
           NK D   ++ V+ E A K A + GI+ FETSAK ++NV+E F+ +   +L
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  196 bits (499), Expect = 9e-51
 Identities = 92/170 (54%), Positives = 130/170 (76%), Gaps = 1/170 (0%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           MA+ YDHLFKLL+IGDSGVGK+ L++RFA++ F+ +YI+TIG+DFKIRTV+I G+K+KLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
           +WDTAGQERF+TIT+ YYRG  G+I+ YD+T  +SF N++ W+  I +N    V  +L+G
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244

Query: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVL 169
           NK D   ++ V+ E A K A + GI+ FETSAK ++NV+E F+ +   +L
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  196 bits (499), Expect = 9e-51
 Identities = 92/170 (54%), Positives = 130/170 (76%), Gaps = 1/170 (0%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           MA+ YDHLFKLL+IGDSGVGK+ L++RFA++ F+ +YI+TIG+DFKIRTV+I G+K+KLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
           +WDTAGQERF+TIT+ YYRG  G+I+ YD+T  +SF N++ W+  I +N    V  +L+G
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244

Query: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVL 169
           NK D   ++ V+ E A K A + GI+ FETSAK ++NV+E F+ +   +L
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  196 bits (499), Expect = 9e-51
 Identities = 92/170 (54%), Positives = 130/170 (76%), Gaps = 1/170 (0%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           MA+ YDHLFKLL+IGDSGVGK+ L++RFA++ F+ +YI+TIG+DFKIRTV+I G+K+KLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
           +WDTAGQERF+TIT+ YYRG  G+I+ YD+T  +SF N++ W+  I +N    V  +L+G
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244

Query: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVL 169
           NK D   ++ V+ E A K A + GI+ FETSAK ++NV+E F+ +   +L
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  196 bits (499), Expect = 9e-51
 Identities = 95/198 (47%), Positives = 138/198 (69%), Gaps = 1/198 (0%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           MA+ YD+LFKLL+IGDSGVGK+ LL RF+++ F+ ++I+TIG+DFKIRT+E++G+K+KLQ
Sbjct: 1   MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVG 119
           IWDTAGQERFRTIT+ YYRG  G+++VYD+T+ +SF N+K W+  I ++   DV R+++G
Sbjct: 61  IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120

Query: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
           NK D  +++ V  E   K A   GI+  ETSAK + NVEE F  +   ++      +   
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDS 180

Query: 180 QQQQQNDVVKLTKNSKRK 197
                   VK+T+N  +K
Sbjct: 181 NSAGAGGPVKITENRSKK 198


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  194 bits (494), Expect = 3e-50
 Identities = 92/198 (46%), Positives = 139/198 (70%), Gaps = 1/198 (0%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           MA+ YD+LFKLL+IGDSGVGK+ +L RF+++ F+ ++I+TIG+DFKIRT+E++G+++KLQ
Sbjct: 1   MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
           IWDTAGQERFRTIT+ YYRG  G+++VYD+T+ +SF N++ W+  I ++   DV ++++G
Sbjct: 61  IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120

Query: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
           NK D  +++ V  E   K A   GI+  ETSAK N+NVE  F  +   +       L   
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180

Query: 180 QQQQQNDVVKLTKNSKRK 197
             Q  N  VK+T + +++
Sbjct: 181 SPQGSNQGVKITPDQQKR 198


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  194 bits (493), Expect = 4e-50
 Identities = 95/200 (47%), Positives = 142/200 (71%), Gaps = 4/200 (2%)

Query: 3   RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 62
           + YD LFKLL+IGDSGVGK+ +L RF+D+ F+ ++I+TIG+DFKI+TVE+ G+K+KLQIW
Sbjct: 4   KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63

Query: 63  DTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNK 121
           DTAGQERF TIT++YYRG  G+++VYD+T+ +SF N+ +WL  I+++  +DV R+L+GNK
Sbjct: 64  DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123

Query: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQ 181
            D  +++VV      + A + GI+ FETSAK N+N+E+ F  + E +LR       K+  
Sbjct: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP---VKEPN 180

Query: 182 QQQNDVVKLTKNSKRKKRCC 201
            +  D+      +  K +CC
Sbjct: 181 SENVDISSGGGVTGWKSKCC 200


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  175 bits (444), Expect = 2e-44
 Identities = 81/175 (46%), Positives = 128/175 (73%), Gaps = 1/175 (0%)

Query: 3   RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 62
           +++D++FKLLIIG+S VGK+S L R+AD++F+ ++++T+G+DFK++TV  N +++KLQIW
Sbjct: 25  QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84

Query: 63  DTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNK 121
           DTAGQER+RTIT+ YYRG  G I++YD+T+ ESF  V+ W  +I   + D+   ILVGNK
Sbjct: 85  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNK 144

Query: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
            D  + +V+ TE       Q+G + FETSAK+N+NV++ F  + +++     ++L
Sbjct: 145 CDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  174 bits (442), Expect = 3e-44
 Identities = 85/175 (48%), Positives = 125/175 (71%), Gaps = 1/175 (0%)

Query: 3   RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 62
           +++D++FKLLIIG+S VGK+S L R+AD+TF+ ++++T+G+DFK++TV  + ++VKLQIW
Sbjct: 17  QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76

Query: 63  DTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNK 121
           DTAGQER+RTIT+ YYRG  G I++YD+T+ ESF  V+ W  +I   + D+   ILVGNK
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNK 136

Query: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
            D  E +VV TE     A Q+G   FE SAKEN++V + F  + + +     D+L
Sbjct: 137 CDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSL 191


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  174 bits (441), Expect = 5e-44
 Identities = 79/184 (42%), Positives = 129/184 (70%), Gaps = 1/184 (0%)

Query: 3   RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 62
           +++D++FKLL+IG+S VGK+S L R+AD++F+ ++++T+G+DFK++TV  + +++KLQIW
Sbjct: 17  QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76

Query: 63  DTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNK 121
           DTAGQER+RTIT+ YYRG  G +++YD+ + ESF  V+ W  +I   + D+   ILVGNK
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNK 136

Query: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQ 181
            D  + +VV  ED  + A  +G + FE SAKEN+NV+++F  + +++     ++L     
Sbjct: 137 CDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSS 196

Query: 182 QQQN 185
              N
Sbjct: 197 SGSN 200


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score =  171 bits (433), Expect = 4e-43
 Identities = 77/175 (44%), Positives = 128/175 (73%), Gaps = 1/175 (0%)

Query: 3   RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 62
           +++D++FK+LIIG+S VGK+S L R+AD++F+ ++++T+G+DFK++T+  N +++KLQIW
Sbjct: 17  QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76

Query: 63  DTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNK 121
           DTAGQER+RTIT+ YYRG  G I++YD+T+ ESF  V+ W  +I   + D+   +LVGNK
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136

Query: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
            D  + +VV +E   + A  +G + FE SAK+N+NV++ F  + +++     ++L
Sbjct: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  167 bits (424), Expect = 4e-42
 Identities = 87/207 (42%), Positives = 132/207 (63%), Gaps = 9/207 (4%)

Query: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
           +YD+LFK+++IGDSGVGKS+LL RF  N F+    +TIGV+F  R+++++G+ +K QIWD
Sbjct: 7   EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66

Query: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122
           TAGQER+R ITS YYRG  G ++VYD+    ++ NV+RWL E+  + D ++  +LVGNK+
Sbjct: 67  TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKS 126

Query: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCIT----ELVLRAKKDNLAK 178
           D    + V T++A  FA + G+   ETSA ++ NVE  F  I      +V + +  +  +
Sbjct: 127 DLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRRE 186

Query: 179 QQQQQQNDVVKL----TKNSKRKKRCC 201
                 N+VV +    T  +K K +CC
Sbjct: 187 NDMSPSNNVVPIHVPPTTENKPKVQCC 213


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  167 bits (423), Expect = 6e-42
 Identities = 85/199 (42%), Positives = 130/199 (65%), Gaps = 6/199 (3%)

Query: 5   YDHLFKLLIIGDSGVGKSSLLLRFADNTF-SGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
           YD  FK++++GDSGVGK+ LL+RF D  F +G++I+T+G+DF+ + ++++G KVKLQ+WD
Sbjct: 60  YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119

Query: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122
           TAGQERFR++T  YYR  H ++++YDVT+  SF N++ WL EI++    DV  +L+GNK 
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179

Query: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQ 182
           D    +VV+ ED  K A + G+   ETSAK  +NV+  F  I +  L+ +      + + 
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAK-ELKQRSMKAPSEPRF 238

Query: 183 QQNDVVKLTKNSKRKKRCC 201
           + +D V   K   R   CC
Sbjct: 239 RLHDYV---KREGRGASCC 254


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  165 bits (418), Expect = 2e-41
 Identities = 88/175 (50%), Positives = 118/175 (67%), Gaps = 2/175 (1%)

Query: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
           DYD LFK+++IG++GVGK+ L+ RF    F      TIGVDF I+TVEINGEKVKLQIWD
Sbjct: 5   DYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWD 64

Query: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD-VCRILVGNKN 122
           TAGQERFR+IT +YYR  + +I+ YD+T  ESF  +  WL EI Q   + V  +LVGNK 
Sbjct: 65  TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 124

Query: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF-NCITELVLRAKKDNL 176
           D  ER+ V  + A +F+    +   ETSAKE+ NVE++F +    L+  A+++ L
Sbjct: 125 DLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISEARQNTL 179


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  164 bits (416), Expect = 4e-41
 Identities = 87/209 (41%), Positives = 133/209 (63%), Gaps = 11/209 (5%)

Query: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
           +YD+LFK+++IGDSGVGKS+LL RF  N F+    +TIGV+F  R+++++G+ +K QIWD
Sbjct: 7   EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66

Query: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122
           TAGQER+R ITS YYRG  G ++VYD+    ++ NV+RWL E+  + D ++  +LVGNK+
Sbjct: 67  TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKS 126

Query: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF-NCITELVLRAKKDNLAKQQQ 181
           D    + V T++A  FA +  +   ETSA ++ NVEE F N +TE+     +  +A +  
Sbjct: 127 DLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAA 186

Query: 182 QQQ---NDVVKLT------KNSKRKKRCC 201
             +   N+VV ++           K +CC
Sbjct: 187 HDESPGNNVVDISVPPTTDGQKPNKLQCC 215


>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
          Length = 206

 Score =  164 bits (414), Expect = 6e-41
 Identities = 89/193 (46%), Positives = 121/193 (62%), Gaps = 7/193 (3%)

Query: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
           M  D     K+LIIG+SGVGKSSLLLRF D+TF      TIGVDFK++T+ ++G K KL 
Sbjct: 1   MDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLA 60

Query: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC--DDVCRILV 118
           IWDTAGQERFRT+T +YYRG  GVI+VYDVT  ++FV +  WL+E+   C  +D+  +LV
Sbjct: 61  IWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 120

Query: 119 GNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
           GNK  D E + V+  +  KFA +  +   E SAK    V+  F  + E +++        
Sbjct: 121 GNK-IDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTP----GL 175

Query: 179 QQQQQQNDVVKLT 191
            + + QN  VKL+
Sbjct: 176 WESENQNKGVKLS 188


>gi|4758996 Ras-related protein Rab-33A [Homo sapiens]
          Length = 237

 Score =  160 bits (404), Expect = 9e-40
 Identities = 95/203 (46%), Positives = 124/203 (61%), Gaps = 11/203 (5%)

Query: 8   LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
           +FK+++IGDS VGK+ L  RF   TF      TIGVDF+ +TVEI GEK+K+Q+WDTAGQ
Sbjct: 36  IFKIIVIGDSNVGKTCLTFRFCGGTFPDKTEATIGVDFREKTVEIEGEKIKVQVWDTAGQ 95

Query: 68  ERFR-TITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCDD--VCRILVGNKNDD 124
           ERFR ++   YYR  H V+ VYDVT   SF N+K W+ E N +     V ++LVGNK D 
Sbjct: 96  ERFRKSMVEHYYRNVHAVVFVYDVTKMTSFTNLKMWIQECNGHAVPPLVPKVLVGNKCDL 155

Query: 125 PERKVVETEDAYKFAGQMGIQLFETSA---KENVNVEEMFNCITELVLRAKKDNLAKQQQ 181
            E+  V +  A KFA    + LFETSA   KE+ NVE +F C+    L+A+K  L +  +
Sbjct: 156 REQIQVPSNLALKFADAHNMLLFETSAKDPKESQNVESIFMCLA-CRLKAQKSLLYRDAE 214

Query: 182 QQQNDVVKL----TKNSKRKKRC 200
           +QQ  V KL      NSK    C
Sbjct: 215 RQQGKVQKLEFPQEANSKTSCPC 237


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  158 bits (400), Expect = 3e-39
 Identities = 81/199 (40%), Positives = 127/199 (63%), Gaps = 6/199 (3%)

Query: 5   YDHLFKLLIIGDSGVGKSSLLLRFADNTF-SGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
           YD   K++++GD+GVGK+  L++F D  F SG++I T+G+DF+ + V ++G +VKLQIWD
Sbjct: 26  YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWD 85

Query: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122
           TAGQERFR++T  YYR    ++++YD+T+  SF N++ WL EI++    DV  +L+GNK 
Sbjct: 86  TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 145

Query: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQ 182
           D    +V+ +ED    A + G+   ETSAK  +NVE  F  I +  L+ +  + A +   
Sbjct: 146 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAK-ELKYRAGHQADEPSF 204

Query: 183 QQNDVVKLTKNSKRKKRCC 201
           Q  D V   ++ K++  CC
Sbjct: 205 QIRDYV---ESQKKRSSCC 220


>gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  157 bits (398), Expect = 4e-39
 Identities = 76/189 (40%), Positives = 122/189 (64%), Gaps = 12/189 (6%)

Query: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGE-------- 55
           DYD+L KLL +GDSGVGK++ L R+ DN F+  +ITT+G+DF+ + V  N +        
Sbjct: 5   DYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGK 64

Query: 56  --KVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQN--CD 111
             KV LQ+WDTAGQERFR++T+ ++R   G ++++D+TS +SF+NV+ W+ ++  N  C+
Sbjct: 65  AFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCE 124

Query: 112 DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRA 171
           +   +L+GNK D P+++ V    A + A + GI  FETSA    NVE+    + +L+++ 
Sbjct: 125 NPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKR 184

Query: 172 KKDNLAKQQ 180
            +  + K Q
Sbjct: 185 MEQCVEKTQ 193


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score =  155 bits (391), Expect = 3e-38
 Identities = 83/190 (43%), Positives = 126/190 (66%), Gaps = 4/190 (2%)

Query: 3   RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 62
           R  D   +++IIG  GVGK+SL+ RF D+TF  +  +T+GVDFKI+TVE+ G+K++LQIW
Sbjct: 37  RPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIW 96

Query: 63  DTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNK 121
           DTAGQERF +ITS YYR   G+I+VYD+T  E+F ++ +W+  I++   +D   +LVGNK
Sbjct: 97  DTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNK 156

Query: 122 NDDPERKVVETEDAYKFAGQM-GIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQ 180
            D    + +  +   KFA Q+ G++  E SAK+N NV+E+F  + + +L  KK  L   +
Sbjct: 157 LDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL--KKMPLDILR 214

Query: 181 QQQQNDVVKL 190
            +  N ++ L
Sbjct: 215 NELSNSILSL 224


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  154 bits (390), Expect = 4e-38
 Identities = 79/169 (46%), Positives = 114/169 (67%), Gaps = 3/169 (1%)

Query: 5   YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDT 64
           YD LFKL+++GD+ VGK+ ++ RF    FS    +TIGVDF ++T+EI G++VKLQIWDT
Sbjct: 15  YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 74

Query: 65  AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNC-DDVCRILVGNKND 123
           AGQERFRTIT +YYR  +G I+ YD+T   SF++V  W+ ++ +    ++ ++L+GNK+D
Sbjct: 75  AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134

Query: 124 DPERKVVETEDAYKFAGQMGIQ-LFETSAKENVNVEEMF-NCITELVLR 170
             E + V   +A   A    I    ETSAK++ NVEE F    TEL++R
Sbjct: 135 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR 183


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  154 bits (389), Expect = 5e-38
 Identities = 77/170 (45%), Positives = 118/170 (69%), Gaps = 3/170 (1%)

Query: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
           ++D+LFK+++IGDS VGK+ ++  F    ++ +   TIGVDF +R+++I+G+KVK+Q+WD
Sbjct: 13  NFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVWD 72

Query: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVGNKN 122
           TAGQERFRTIT +YYR  H  I+ YD+T   +F ++  W+HEI +    +V  +L+GNK 
Sbjct: 73  TAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNKC 132

Query: 123 DDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCIT-ELVLR 170
           D  E++ V  EDA   A + G + + ETSAKE+ N+EE+F  +  EL+ R
Sbjct: 133 DLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIAR 182


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  153 bits (387), Expect = 8e-38
 Identities = 78/158 (49%), Positives = 108/158 (68%), Gaps = 1/158 (0%)

Query: 5   YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDT 64
           Y +LFK +IIGD+GVGKS LLL+F D  F   +  TIGV+F  R V I+G+++KLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62

Query: 65  AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-NCDDVCRILVGNKND 123
           AGQE FR+IT +YYRG  G ++VYD+T  E+F ++  WL +  Q +  ++  +L+GNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122

Query: 124 DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
              R+ V+ E+   FA + G+   ETSAK   NVEE F
Sbjct: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAF 160


>gi|116812567 RAB25 [Homo sapiens]
          Length = 213

 Score =  153 bits (387), Expect = 8e-38
 Identities = 82/185 (44%), Positives = 118/185 (63%), Gaps = 8/185 (4%)

Query: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
           DY+ +FK+++IG+SGVGK++LL RF  N FS    TTIGV+F  RTV +    VK QIWD
Sbjct: 8   DYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWD 67

Query: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122
           TAG ER+R ITS YYRG  G ++V+D+T  +++  V+RWL E+  + +  +  +LVGNK+
Sbjct: 68  TAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKS 127

Query: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQ 182
           D  + + V TE+A  FA   G+   ETSA ++ NVE  F  +        K+  AK  +Q
Sbjct: 128 DLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVL-------KEIFAKVSKQ 180

Query: 183 QQNDV 187
           +QN +
Sbjct: 181 RQNSI 185


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  152 bits (383), Expect = 2e-37
 Identities = 82/199 (41%), Positives = 124/199 (62%), Gaps = 7/199 (3%)

Query: 6   DH-LFKLLIIGDSGVGKSSLLLRFADNTF-SGSYITTIGVDFKIRTVEINGEKVKLQIWD 63
           DH L K +++GDSGVGK+SLL++F    F  GS+  T+G+ F  + V ++G +VKLQIWD
Sbjct: 19  DHVLHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWD 78

Query: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122
           TAGQERFR++T  YYR    ++++YD+T+  SF N++ WL EI++    DV  +L+GNK 
Sbjct: 79  TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 138

Query: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQ 182
           D    +V+ +ED    A + G+   ETSAK  +NVE  F  I +  L+ +  + A +   
Sbjct: 139 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAK-ELKYRAGHQADEPSF 197

Query: 183 QQNDVVKLTKNSKRKKRCC 201
           Q  D V   ++ K++  CC
Sbjct: 198 QIRDYV---ESQKKRSSCC 213


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  152 bits (383), Expect = 2e-37
 Identities = 76/158 (48%), Positives = 109/158 (68%), Gaps = 1/158 (0%)

Query: 5   YDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDT 64
           Y +LFK +IIGD+GVGKS LLL+F D  F   +  TIGV+F  R + I+G+++KLQIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62

Query: 65  AGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKND 123
           AGQE FR+IT +YYRG  G ++VYD+T  ++F ++  WL +  Q+ + ++  +L+GNK+D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122

Query: 124 DPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMF 161
              R+ V+ E+   FA + G+   ETSAK   NVEE F
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAF 160


>gi|34485711 Ras-related protein Rab-27A [Homo sapiens]
          Length = 221

 Score =  149 bits (376), Expect = 2e-36
 Identities = 67/179 (37%), Positives = 118/179 (65%), Gaps = 12/179 (6%)

Query: 4   DYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEIN---------- 53
           DYD+L K L +GDSGVGK+S+L ++ D  F+  +ITT+G+DF+ + V             
Sbjct: 5   DYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGR 64

Query: 54  GEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQN--CD 111
           G+++ LQ+WDTAGQERFR++T+ ++R   G ++++D+T+ +SF+NV+ W+ ++  +  C+
Sbjct: 65  GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCE 124

Query: 112 DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLR 170
           +   +L GNK+D  +++VV+ E+A   A + GI  FETSA    N+ +    + +L+++
Sbjct: 125 NPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMK 183


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,457,314
Number of Sequences: 37866
Number of extensions: 247910
Number of successful extensions: 1406
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 923
Number of HSP's gapped (non-prelim): 283
length of query: 201
length of database: 18,247,518
effective HSP length: 97
effective length of query: 104
effective length of database: 14,574,516
effective search space: 1515749664
effective search space used: 1515749664
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.