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Search of human proteins with 5730013
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens]
(288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149408135 ret finger protein-like 3 isoform 1 [Homo sapiens] 591 e-169
gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens] 591 e-169
gi|227116308 ret finger protein-like 2 isoform 3 [Homo sapiens] 557 e-159
gi|227116306 ret finger protein-like 2 isoform 3 [Homo sapiens] 557 e-159
gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens] 557 e-159
gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens] 557 e-159
gi|149408130 ret finger protein-like 1 [Homo sapiens] 542 e-154
gi|222446629 ret finger protein-like 4A [Homo sapiens] 337 7e-93
gi|5730009 ret finger protein [Homo sapiens] 153 2e-37
gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo ... 149 3e-36
gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo... 149 3e-36
gi|4557743 Mediterranean fever protein [Homo sapiens] 149 4e-36
gi|153791360 ret finger protein-like 4B [Homo sapiens] 148 6e-36
gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Hom... 145 5e-35
gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo... 145 5e-35
gi|15208660 tripartite motif protein 21 [Homo sapiens] 142 3e-34
gi|31542779 tripartite motif family-like 1 [Homo sapiens] 137 8e-33
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 136 2e-32
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 134 9e-32
gi|31881693 butyrophilin, subfamily 2, member A2 isoform b [Homo... 134 1e-31
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ... 134 1e-31
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur... 131 8e-31
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 130 1e-30
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 130 1e-30
gi|5454014 tripartite motif-containing 38 [Homo sapiens] 127 9e-30
gi|63054855 erythroblast membrane-associated protein precursor [... 127 1e-29
gi|19923536 erythroblast membrane-associated protein precursor [... 127 1e-29
gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens] 122 3e-28
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens] 122 3e-28
gi|37622899 ring finger protein 137 [Homo sapiens] 122 4e-28
>gi|149408135 ret finger protein-like 3 isoform 1 [Homo sapiens]
Length = 317
Score = 591 bits (1523), Expect = e-169
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK
Sbjct: 30 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 89
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS
Sbjct: 90 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 149
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL
Sbjct: 150 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 209
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 210 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 269
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 270 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 317
>gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens]
Length = 288
Score = 591 bits (1523), Expect = e-169
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS
Sbjct: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL
Sbjct: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|227116308 ret finger protein-like 2 isoform 3 [Homo sapiens]
Length = 288
Score = 557 bits (1435), Expect = e-159
Identities = 272/288 (94%), Positives = 278/288 (96%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MAALFQEASSCPVCSDYLEKPMSLECGC VCLKCINSLQKEPHGEDLLCCC SMVS++NK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 60
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
IR NRQLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSVRS
Sbjct: 61 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 120
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
G I QNRQDLAERFDVSVCILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVH KG+IQL
Sbjct: 121 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 180
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
TTELGFWTVSLRDG RLSA+TVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
FRSVSAEEPLRPFLAPS+PPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|227116306 ret finger protein-like 2 isoform 3 [Homo sapiens]
Length = 288
Score = 557 bits (1435), Expect = e-159
Identities = 272/288 (94%), Positives = 278/288 (96%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MAALFQEASSCPVCSDYLEKPMSLECGC VCLKCINSLQKEPHGEDLLCCC SMVS++NK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 60
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
IR NRQLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSVRS
Sbjct: 61 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 120
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
G I QNRQDLAERFDVSVCILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVH KG+IQL
Sbjct: 121 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 180
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
TTELGFWTVSLRDG RLSA+TVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
FRSVSAEEPLRPFLAPS+PPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens]
Length = 317
Score = 557 bits (1435), Expect = e-159
Identities = 272/288 (94%), Positives = 278/288 (96%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MAALFQEASSCPVCSDYLEKPMSLECGC VCLKCINSLQKEPHGEDLLCCC SMVS++NK
Sbjct: 30 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 89
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
IR NRQLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSVRS
Sbjct: 90 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 149
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
G I QNRQDLAERFDVSVCILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVH KG+IQL
Sbjct: 150 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 209
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
TTELGFWTVSLRDG RLSA+TVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 210 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 269
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
FRSVSAEEPLRPFLAPS+PPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 270 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 317
>gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens]
Length = 378
Score = 557 bits (1435), Expect = e-159
Identities = 272/288 (94%), Positives = 278/288 (96%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MAALFQEASSCPVCSDYLEKPMSLECGC VCLKCINSLQKEPHGEDLLCCC SMVS++NK
Sbjct: 91 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 150
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
IR NRQLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSVRS
Sbjct: 151 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 210
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
G I QNRQDLAERFDVSVCILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVH KG+IQL
Sbjct: 211 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 270
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
TTELGFWTVSLRDG RLSA+TVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 271 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 330
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
FRSVSAEEPLRPFLAPS+PPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 331 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378
>gi|149408130 ret finger protein-like 1 [Homo sapiens]
Length = 317
Score = 542 bits (1397), Expect = e-154
Identities = 263/288 (91%), Positives = 270/288 (93%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MAALFQEASSCPVCSDYLEKPMSLECGC VC KCINSLQKEPHGEDLLCCCCSMVSQ+NK
Sbjct: 30 MAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQKNK 89
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
IRP+ QLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS
Sbjct: 90 IRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 149
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
G ITQNRQDLAERFDVS+CILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVH KG+I L
Sbjct: 150 GCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRIHL 209
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
TTE GFWTVSLRDGSRLSASTVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAE GSHVYT
Sbjct: 210 TTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHVYT 269
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
FRSVSAEEPL F AP PPNGD+ VLSICP++N GTTDAPV PGEAK
Sbjct: 270 FRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVINPGTTDAPVHPGEAK 317
>gi|222446629 ret finger protein-like 4A [Homo sapiens]
Length = 287
Score = 337 bits (864), Expect = 7e-93
Identities = 163/282 (57%), Positives = 209/282 (74%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MA F++ CPVC LE+ + L+CG CL+C+NSLQKEP GE LLC CS+VSQ++
Sbjct: 1 MAEHFKQIIRCPVCLKDLEEAVQLKCGYACCLQCLNSLQKEPDGEGLLCRFCSVVSQKDD 60
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
I+P +L LVS IKELEPKLK +L MNPRMRKFQVDMT D DTANN+L+IS+DLRS RS
Sbjct: 61 IKPKYKLRALVSIIKELEPKLKSVLTMNPRMRKFQVDMTFDVDTANNYLIISEDLRSFRS 120
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
G ++QNR++ AERFD ++C+LG+PRFT GRHYWEVDVGTS WD+GVC+ESV+ +GKI L
Sbjct: 121 GDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGTSQVWDVGVCKESVNRQGKIVL 180
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
++E GF TV R+G +ASTVP+T L V +L RVGIFLD+GM++++F++ G H+YT
Sbjct: 181 SSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGMRSIAFYNVSDGCHIYT 240
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPV 282
F + EP RPF A DQ +LSIC ++N APV
Sbjct: 241 FIEIPVCEPWRPFFAHKRGSQDDQSILSICSVINPSAASAPV 282
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 153 bits (386), Expect = 2e-37
Identities = 83/206 (40%), Positives = 116/206 (56%), Gaps = 3/206 (1%)
Query: 70 LVSHIKELEPKLKKILQMNPRMRKFQ---VDMTLDADTANNFLLISDDLRSVRSGLITQN 126
L +K+ K++ ++ +R+ Q VD+TLD DTA L++SD+LR VR + Q+
Sbjct: 287 LTESLKQFTEKMQSDMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQD 346
Query: 127 RQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGF 186
D ERF++ C+LGSP F GRHYWEV+VG +W +GVC +SV KG + + GF
Sbjct: 347 LPDNPERFNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGF 406
Query: 187 WTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSA 246
W VSL G A T P+T L + LQRVGIFLD VSF++ H +TF +
Sbjct: 407 WAVSLWYGKEYWALTSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATF 466
Query: 247 EEPLRPFLAPSIPPNGDQGVLSICPL 272
P+RP+ + S L ICP+
Sbjct: 467 CGPVRPYFSLSYSGGKSAAPLIICPM 492
Score = 49.7 bits (117), Expect = 3e-06
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
+A Q+ ++CPVC Y +PM L+CG +C C+ ++ C C +
Sbjct: 6 VAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAE-TNVSCPQCRETFPQRH 64
Query: 61 IRPNRQLERLVSHIKEL 77
+RPNR L + +K+L
Sbjct: 65 MRPNRHLANVTQLVKQL 81
>gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo
sapiens]
Length = 584
Score = 149 bits (376), Expect = 3e-36
Identities = 94/246 (38%), Positives = 132/246 (53%), Gaps = 35/246 (14%)
Query: 57 QRNKIRPNRQLERLVSHIKEL-------EPKLKKILQMNPRMRKFQ-------------- 95
Q+ KI +R+ ER +KE+ E L++ LQ + RK Q
Sbjct: 274 QKEKIALSRETER-EREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEW 332
Query: 96 -------VDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTC 148
D+ LD DTAN LL+S+D RSV+ ++ D ERF+ C+LG FT
Sbjct: 333 KMALFKPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTS 392
Query: 149 GRHYWEVDVGTSTEWDLGVCRESV-HCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFL 207
GRHYWEV+VG EW +GVC ++V KG +++T E G+WT+ L DG++ A T P T L
Sbjct: 393 GRHYWEVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNL 452
Query: 208 LVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSIPPNGDQGV 266
+ ++VGIFLD +SF++A GSH+YTF S EPL P F ++ P
Sbjct: 453 KLPEPPRKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTLEPT----A 508
Query: 267 LSICPL 272
L+ICP+
Sbjct: 509 LTICPI 514
>gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo
sapiens]
Length = 542
Score = 149 bits (376), Expect = 3e-36
Identities = 94/246 (38%), Positives = 132/246 (53%), Gaps = 35/246 (14%)
Query: 57 QRNKIRPNRQLERLVSHIKEL-------EPKLKKILQMNPRMRKFQ-------------- 95
Q+ KI +R+ ER +KE+ E L++ LQ + RK Q
Sbjct: 232 QKEKIALSRETER-EREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEW 290
Query: 96 -------VDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTC 148
D+ LD DTAN LL+S+D RSV+ ++ D ERF+ C+LG FT
Sbjct: 291 KMALFKPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTS 350
Query: 149 GRHYWEVDVGTSTEWDLGVCRESV-HCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFL 207
GRHYWEV+VG EW +GVC ++V KG +++T E G+WT+ L DG++ A T P T L
Sbjct: 351 GRHYWEVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNL 410
Query: 208 LVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSIPPNGDQGV 266
+ ++VGIFLD +SF++A GSH+YTF S EPL P F ++ P
Sbjct: 411 KLPEPPRKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTLEPT----A 466
Query: 267 LSICPL 272
L+ICP+
Sbjct: 467 LTICPI 472
>gi|4557743 Mediterranean fever protein [Homo sapiens]
Length = 781
Score = 149 bits (375), Expect = 4e-36
Identities = 77/182 (42%), Positives = 110/182 (60%), Gaps = 1/182 (0%)
Query: 96 VDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEV 155
V++ LDA+TA L+ SDDL+SVR G + D +RFD + +LGSP F GR YWEV
Sbjct: 598 VNVILDAETAYPNLIFSDDLKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEV 657
Query: 156 DVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQR 215
+VG T W LG C+ S+ KG + L+ E G+W V + + AS+VP T LL+ +R
Sbjct: 658 EVGDKTAWILGACKTSISRKGNMTLSPENGYWVVIMMKENEYQASSVPPTRLLIKEPPKR 717
Query: 216 VGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNG-DQGVLSICPLMN 274
VGIF+D + ++SF++ + SH+YTF S S PL+P +P G + L+ICP+
Sbjct: 718 VGIFVDYRVGSISFYNVTARSHIYTFASCSFSGPLQPIFSPGTRDGGKNTAPLTICPVGG 777
Query: 275 SG 276
G
Sbjct: 778 QG 779
>gi|153791360 ret finger protein-like 4B [Homo sapiens]
Length = 263
Score = 148 bits (373), Expect = 6e-36
Identities = 97/272 (35%), Positives = 144/272 (52%), Gaps = 10/272 (3%)
Query: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
MA Q SCPVC D+ +SL C C CI E H +C C V +
Sbjct: 1 MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVVKVPA 60
Query: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
+ Q+ L K+ +L++ L + +R F+ D+TLDA TA++ L+ S+DLRS +
Sbjct: 61 LE-EWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQC 119
Query: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
I DL + ++ C+LG+P F+ G+HYWEV+VG W LGVC+E K L
Sbjct: 120 KKI---HHDLTKDPRLA-CVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSN-DL 174
Query: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
E GFW +S++ G+ + A+T L + +L+RVGIFLD ++ + FFD ++ +YT
Sbjct: 175 FPEHGFW-ISMKAGA-IHANT-HLERIPASPRLRRVGIFLDADLEEIQFFDVDNNVLIYT 231
Query: 241 FRSVSAEEPLRPFLAPSIPPNGDQG-VLSICP 271
+ E L PF + G+ G VL+ICP
Sbjct: 232 HDGFFSLELLCPFFCLELLGEGESGNVLTICP 263
>gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Homo
sapiens]
Length = 461
Score = 145 bits (365), Expect = 5e-35
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 97 DMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVD 156
D+ LD TAN LL+S+D RSV+ Q+ D ERF+ C+LG F GRHYWEV+
Sbjct: 289 DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEVE 348
Query: 157 VGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRV 216
VG EW +GVC ++V KG +++T E GFWT+ L DG++ T P T L + + ++V
Sbjct: 349 VGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPKKV 408
Query: 217 GIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSIPPNGDQGVLSICP 271
G+FLD ++SF++A GSH++TF VS E L P F ++ P L+ICP
Sbjct: 409 GVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTLEPT----ALTICP 460
>gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo
sapiens]
Length = 513
Score = 145 bits (365), Expect = 5e-35
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 97 DMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVD 156
D+ LD TAN LL+S+D RSV+ Q+ D ERF+ C+LG F GRHYWEV+
Sbjct: 341 DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEVE 400
Query: 157 VGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRV 216
VG EW +GVC ++V KG +++T E GFWT+ L DG++ T P T L + + ++V
Sbjct: 401 VGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPKKV 460
Query: 217 GIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSIPPNGDQGVLSICP 271
G+FLD ++SF++A GSH++TF VS E L P F ++ P L+ICP
Sbjct: 461 GVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTLEPT----ALTICP 512
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 142 bits (358), Expect = 3e-34
Identities = 89/215 (41%), Positives = 121/215 (56%), Gaps = 14/215 (6%)
Query: 69 RLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQ 128
R V H+ P LKK+L R V +TLD DTAN +L++S+D R VR G Q+
Sbjct: 270 RSVCHV----PGLKKML------RTCAVHITLDPDTANPWLILSEDRRQVRLGDTQQSIP 319
Query: 129 DLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWT 188
ERFD +LG+ F G+HYWEVDV WDLGVCR+SV KG L+++ GFWT
Sbjct: 320 GNEERFDSYPMVLGAQHFHSGKHYWEVDVTGKEAWDLGVCRDSVRRKGHFLLSSKSGFWT 379
Query: 189 VSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFD-AESGSHVYTFRSVSAE 247
+ L + + A T P T L + +VGIFLD VSF++ + GS +Y+F +
Sbjct: 380 IWLWNKQKYEAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLIYSFSECAFT 439
Query: 248 EPLRPFLAPSIPPNG-DQGVLSICPLM--NSGTTD 279
PLRPF +P G + L++CPL + G+TD
Sbjct: 440 GPLRPFFSPGFNDGGKNTAPLTLCPLNIGSQGSTD 474
Score = 57.4 bits (137), Expect = 1e-08
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 7 EASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQ 66
E +CP+C D +P+S+ECG + C +CI+ + K G +C C +RPNRQ
Sbjct: 12 EEVTCPICLDPFVEPVSIECGHSFCQECISQVGK---GGGSVCPVCRQRFLLKNLRPNRQ 68
Query: 67 LERLVSHIKELEPKLKK 83
L +V+++KE+ + ++
Sbjct: 69 LANMVNNLKEISQEARE 85
>gi|31542779 tripartite motif family-like 1 [Homo sapiens]
Length = 468
Score = 137 bits (346), Expect = 8e-33
Identities = 77/197 (39%), Positives = 114/197 (57%), Gaps = 2/197 (1%)
Query: 78 EPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVS 137
E L +I M +RKF ++TLD TAN +L++S+DL+SV+ G Q D ERFD S
Sbjct: 268 ELSLCRITGMKEMLRKFSTEITLDPATANAYLVLSEDLKSVKYGGSRQQLPDNPERFDQS 327
Query: 138 VCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRL 197
+LG+ FT GRHYWEV+VG TEW++G+C++SV KG + F + L+ G
Sbjct: 328 ATVLGTQIFTSGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPKPPGDLFSLIGLKIGDDY 387
Query: 198 SA-STVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAP 256
S + PL V + +VG+FLD +++F++ S +Y+F S +E LRP +P
Sbjct: 388 SLWVSSPLKGQHVREPVCKVGVFLDYESGHIAFYNGTDESLIYSFPQASFQEALRPIFSP 447
Query: 257 SIPPNG-DQGVLSICPL 272
+P G + L+IC L
Sbjct: 448 CLPNEGTNTDPLTICSL 464
Score = 43.9 bits (102), Expect = 2e-04
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 6 QEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNR 65
+E +C +C DY P++ ECG + CL C+ +E H L C C + + N
Sbjct: 11 REELTCFICLDYFSSPVTTECGHSFCLVCLLRSWEE-HNTPLSCPECWRTLEGPHFQSNE 69
Query: 66 QLERLVSHIKELEPKL 81
+L RL S ++L ++
Sbjct: 70 RLGRLASIARQLRSQV 85
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 136 bits (342), Expect = 2e-32
Identities = 83/192 (43%), Positives = 112/192 (58%), Gaps = 7/192 (3%)
Query: 91 MRKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGR 150
+R+F+ D+TLD DTAN L++S+D RSV+ G + Q D ERFD C+LG RFT GR
Sbjct: 282 LRRFRGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGR 341
Query: 151 HYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVD 210
HYWEV+VG T W LGVCRE+V+ K K +L+ GFW + GS ++S L L
Sbjct: 342 HYWEVEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFL-GSYYNSSERALAPLRDP 400
Query: 211 RKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSIC 270
+ RVGIFLD ++SF+ A GS ++ F + LRP +P + ++IC
Sbjct: 401 PR--RVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPL---SSSPTPMTIC 455
Query: 271 -PLMNSGTTDAP 281
P SG T AP
Sbjct: 456 RPKGGSGDTLAP 467
Score = 53.9 bits (128), Expect = 2e-07
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 6 QEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNR 65
QE ++C +C DY P+ +CG C +CI +P G C C +S + +RPNR
Sbjct: 11 QEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEG-PYACPECRELSPQRNLRPNR 69
Query: 66 QLERLVSHIKELEP 79
L ++ + L P
Sbjct: 70 PLAKMAEMARRLHP 83
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 134 bits (337), Expect = 9e-32
Identities = 78/177 (44%), Positives = 104/177 (58%), Gaps = 4/177 (2%)
Query: 96 VDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEV 155
VD+TLD DTA+ L + +D +SVR Q + ERFD C+LG FT GRHYWEV
Sbjct: 303 VDVTLDPDTAHPHLFLYEDSKSVRLEDSRQKLPEKTERFDSWPCVLGRETFTSGRHYWEV 362
Query: 156 DVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQR 215
+VG T+W +GVCRE+V KG +T E GFW V L G+ A T T L + +R
Sbjct: 363 EVGDRTDWAIGVCRENVMKKGFDPMTPENGFWAVELY-GNGYWALTPLRTPLPLAGPPRR 421
Query: 216 VGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICPL 272
VGIFLD ++SF++ GS +YTF +V+ PLRPF + + L+ICP+
Sbjct: 422 VGIFLDYESGDISFYNMNDGSDIYTFSNVTFSGPLRPFFCLW---SSGKKPLTICPI 475
>gi|31881693 butyrophilin, subfamily 2, member A2 isoform b [Homo
sapiens]
Length = 407
Score = 134 bits (336), Expect = 1e-31
Identities = 85/233 (36%), Positives = 120/233 (51%), Gaps = 19/233 (8%)
Query: 51 CCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKI---LQMNPRMRK---FQVDMTLDADT 104
CC QR K +++S K++E + K+I LQ R R+ D+ LD DT
Sbjct: 168 CCIKKLQREK--------KILSGEKKVEQEEKEIAQQLQEELRWRRTFLHAADVVLDPDT 219
Query: 105 ANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWD 164
A+ L +S+D RSVR G Q D ERFD C+LG F G+HYWEV+V W
Sbjct: 220 AHPELFLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWT 279
Query: 165 LGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGM 224
+GVCR SV KG++ L + GFWT+ + G++ A + P L + L RVG+FLD
Sbjct: 280 VGVCRHSVERKGEVLLIPQNGFWTLEM-FGNQYRALSSPERILPLKESLCRVGVFLDYEA 338
Query: 225 QNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGT 277
+VSF++ SH+YT + P+RPF D + ICP + +
Sbjct: 339 GDVSFYNMRDRSHIYTCPRSAFTVPVRPFFR----LGSDDSPIFICPALTGAS 387
>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
sapiens]
Length = 523
Score = 134 bits (336), Expect = 1e-31
Identities = 85/233 (36%), Positives = 120/233 (51%), Gaps = 19/233 (8%)
Query: 51 CCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKI---LQMNPRMRK---FQVDMTLDADT 104
CC QR K +++S K++E + K+I LQ R R+ D+ LD DT
Sbjct: 284 CCIKKLQREK--------KILSGEKKVEQEEKEIAQQLQEELRWRRTFLHAADVVLDPDT 335
Query: 105 ANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWD 164
A+ L +S+D RSVR G Q D ERFD C+LG F G+HYWEV+V W
Sbjct: 336 AHPELFLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWT 395
Query: 165 LGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGM 224
+GVCR SV KG++ L + GFWT+ + G++ A + P L + L RVG+FLD
Sbjct: 396 VGVCRHSVERKGEVLLIPQNGFWTLEM-FGNQYRALSSPERILPLKESLCRVGVFLDYEA 454
Query: 225 QNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGT 277
+VSF++ SH+YT + P+RPF D + ICP + +
Sbjct: 455 GDVSFYNMRDRSHIYTCPRSAFTVPVRPFFR----LGSDDSPIFICPALTGAS 503
>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
[Homo sapiens]
Length = 527
Score = 131 bits (329), Expect = 8e-31
Identities = 89/250 (35%), Positives = 129/250 (51%), Gaps = 16/250 (6%)
Query: 30 VCLKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNP 89
VC+ IN LQKE + +L + +I + V KE E ++K+ LQ
Sbjct: 264 VCIYWINKLQKE---KKILSGEKEFERETREIALKELEKERVQ--KEEELQVKEKLQEEL 318
Query: 90 RMRK---FQVDMTLDADTANNFLLISDDLRSVRS---GLITQNRQDLAERFDVSVCILGS 143
R R+ VD+ LD DTA+ L +S+D RSVR + ++ D ERFD C+LG
Sbjct: 319 RWRRTFLHAVDVVLDPDTAHPDLFLSEDRRSVRRCPFRHLGESVPDNPERFDSQPCVLGR 378
Query: 144 PRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVP 203
F G+HYWEV+V EW +GVCR+SV KG++ L + GFWT+ + G + S+ P
Sbjct: 379 ESFASGKHYWEVEVENVIEWTVGVCRDSVERKGEVLLIPQNGFWTLEMHKGQYRAVSS-P 437
Query: 204 LTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGD 263
L + L RVG+FLD +VSF++ SH+YT + P+RPF +
Sbjct: 438 DRILPLKESLCRVGVFLDYEAGDVSFYNMRDRSHIYTCPRSAFSVPVRPFFRLGC----E 493
Query: 264 QGVLSICPLM 273
+ ICP +
Sbjct: 494 DSPIFICPAL 503
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 130 bits (327), Expect = 1e-30
Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 12/210 (5%)
Query: 52 CSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLI 111
C V + +LE+ S+ L+KIL ++ D+TLD +TA+ L++
Sbjct: 269 CEKVKTMEVTSVSIELEKNFSNFPRQYFALRKIL------KQLIADVTLDPETAHPNLVL 322
Query: 112 SDDLRSVRSGLITQNRQDLAE---RFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVC 168
S+D +SV+ + +DL + RF C+L + FT GRHYWEV+VG T W +GVC
Sbjct: 323 SEDRKSVK--FVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVC 380
Query: 169 RESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVS 228
R+SV KG++ E G+W V L +G + +A+T P T L + K +RVGIFLD +S
Sbjct: 381 RDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLS 440
Query: 229 FFDAESGSHVYTFRSVSAEEPLRPFLAPSI 258
F++ SH+YTF E+ L P P I
Sbjct: 441 FYNVTDRSHIYTFTDTFTEK-LWPLFYPGI 469
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 6 QEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNR 65
Q +SC VC +YL++P+ +ECG C CI ++ D C C S+ +RPNR
Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVCRKTSRYRSLRPNR 82
Query: 66 QLERLVSHIKELEPKLKKI 84
QL +V K+L+ +KI
Sbjct: 83 QLGSMVEIAKQLQAVKRKI 101
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 130 bits (327), Expect = 1e-30
Identities = 78/210 (37%), Positives = 115/210 (54%), Gaps = 12/210 (5%)
Query: 52 CSMVSQRNKIRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLI 111
C V + +LE+ S+ L+KIL ++ D+TLD +TA+ L++
Sbjct: 299 CEKVKTMEVTSVSIELEKNFSNFPRQYFALRKIL------KQLIADVTLDPETAHPNLVL 352
Query: 112 SDDLRSVRSGLITQNRQDLAE---RFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVC 168
S+D +SV+ + +DL + RF C+L + FT GRHYWEV+VG T W +GVC
Sbjct: 353 SEDRKSVK--FVETRLRDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVC 410
Query: 169 RESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVS 228
R+SV KG++ E G+W V L +G + +A+T P T L + K +RVGIFLD +S
Sbjct: 411 RDSVSRKGELTPLPETGYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLS 470
Query: 229 FFDAESGSHVYTFRSVSAEEPLRPFLAPSI 258
F++ SH+YTF E+ L P P I
Sbjct: 471 FYNVTDRSHIYTFTDTFTEK-LWPLFYPGI 499
Score = 57.4 bits (137), Expect = 1e-08
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 6 QEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNR 65
Q +SC VC +YL++P+ +ECG C CI ++ D C C S+ +RPNR
Sbjct: 24 QVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RDFPCPVCRKTSRYRSLRPNR 82
Query: 66 QLERLVSHIKELEPKLKKI 84
QL +V K+L+ +KI
Sbjct: 83 QLGSMVEIAKQLQAVKRKI 101
>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
Length = 465
Score = 127 bits (320), Expect = 9e-30
Identities = 72/188 (38%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
Query: 82 KKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCIL 141
K + +R QV +TLD DTA++ L++S+D R V G +N+ + RF C+L
Sbjct: 278 KLYFDVKKMLRSHQVSVTLDPDTAHHELILSEDRRQVTRGYTQENQDTSSRRFTAFPCVL 337
Query: 142 GSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSAST 201
G FT GR Y+EVDVG T WDLGVC E+V ++ + GFWT+ L A T
Sbjct: 338 GCEGFTSGRRYFEVDVGEGTGWDLGVCMENVQRGTGMKQEPQSGFWTLRLCKKKGYVALT 397
Query: 202 VPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAP----- 256
P T L + + VGIFLD VSF++ +G H++TF S + LRP+
Sbjct: 398 SPPTSLHLHEQPLLVGIFLDYEAGVVSFYNGNTGCHIFTFPKASFSDTLRPYFQVYQYSP 457
Query: 257 -SIPPNGD 263
+PP GD
Sbjct: 458 LFLPPPGD 465
Score = 50.1 bits (118), Expect = 2e-06
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 7 EASSCPVCSDYLEKPMSLECGCTVCLKCI-----NSLQKEPHGEDLLCCCCSMVSQRNKI 61
E ++C +C + P+S+ CG + C CI N QK+ E C C + +
Sbjct: 12 EEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDSL 71
Query: 62 RPNRQLERLVSHIKELEPKL 81
RPN+QL L+ +KE + ++
Sbjct: 72 RPNKQLGSLIEALKETDQEM 91
>gi|63054855 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 127 bits (319), Expect = 1e-29
Identities = 85/221 (38%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 69 RLVSHIKELEPKLK-KILQMNPRMRKFQ---VDMTLDADTANNFLLISDDLRSVRSGLIT 124
+L +K+L +LK K N R+ + V +TLD DTA+ L++S+D R VR G
Sbjct: 207 KLHKAVKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRR 266
Query: 125 QNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTEL 184
Q D +RFD V ILGS FT G HYWEV VG T+W LGVC ESV KGK+ +
Sbjct: 267 QPVPDNPQRFDFVVSILGSEYFTTGCHYWEVYVGDKTKWILGVCSESVSRKGKVTASPAN 326
Query: 185 GFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 244
G W + G+ A T P T + + VGIFLD +SF++ + SH++TF +
Sbjct: 327 GHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTF-TH 385
Query: 245 SAEEPLRPFLAPSIPPNG-DQGVLSICPLMNSGTTDAPVRP 284
+ PLRPF P + G + L IC ++ RP
Sbjct: 386 NFSGPLRPFFEPCLHDGGKNTAPLVICSELHKSEESIVPRP 426
>gi|19923536 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 127 bits (319), Expect = 1e-29
Identities = 85/221 (38%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 69 RLVSHIKELEPKLK-KILQMNPRMRKFQ---VDMTLDADTANNFLLISDDLRSVRSGLIT 124
+L +K+L +LK K N R+ + V +TLD DTA+ L++S+D R VR G
Sbjct: 207 KLHKAVKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRR 266
Query: 125 QNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTEL 184
Q D +RFD V ILGS FT G HYWEV VG T+W LGVC ESV KGK+ +
Sbjct: 267 QPVPDNPQRFDFVVSILGSEYFTTGCHYWEVYVGDKTKWILGVCSESVSRKGKVTASPAN 326
Query: 185 GFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 244
G W + G+ A T P T + + VGIFLD +SF++ + SH++TF +
Sbjct: 327 GHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTF-TH 385
Query: 245 SAEEPLRPFLAPSIPPNG-DQGVLSICPLMNSGTTDAPVRP 284
+ PLRPF P + G + L IC ++ RP
Sbjct: 386 NFSGPLRPFFEPCLHDGGKNTAPLVICSELHKSEESIVPRP 426
>gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens]
Length = 341
Score = 122 bits (307), Expect = 3e-28
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 98 MTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDV 157
+TLD TA+ L++S SV G I + D ERFD SV +LGS FT G+ YWEV+V
Sbjct: 166 LTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEV 225
Query: 158 GTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVG 217
T+W +GV RES+ KG LT E GFW + LR+ + L A +P L + L +VG
Sbjct: 226 AKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVG 285
Query: 218 IFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGD 263
I+LD +SF++A++ +H+YTF + E+ L P+ P + G+
Sbjct: 286 IYLDYEGGQLSFYNAKTMTHIYTFSNTFMEK-LYPYFCPCLNDGGE 330
>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
Length = 500
Score = 122 bits (307), Expect = 3e-28
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 98 MTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDV 157
+TLD TA+ L++S SV G I + D ERFD SV +LGS FT G+ YWEV+V
Sbjct: 325 LTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEV 384
Query: 158 GTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVG 217
T+W +GV RES+ KG LT E GFW + LR+ + L A +P L + L +VG
Sbjct: 385 AKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVG 444
Query: 218 IFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSIPPNGD 263
I+LD +SF++A++ +H+YTF + E+ L P+ P + G+
Sbjct: 445 IYLDYEGGQLSFYNAKTMTHIYTFSNTFMEK-LYPYFCPCLNDGGE 489
Score = 50.1 bits (118), Expect = 2e-06
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 14/131 (10%)
Query: 11 CPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNKIRPNRQLERL 70
CP+C+D+ P+ L CG C CI + ++ C C M+ Q N N L++L
Sbjct: 41 CPLCNDWFRDPLMLSCGHNFCEACIQDFWR-LQAKETFCPECKMLCQYNNCTFNPVLDKL 99
Query: 71 VSHIKELE------------PKLKKILQMNPRMRKFQV-DMTLDADTANNFLLISDDLRS 117
V IK+L LK + + ++ FQ D L + FL ISD +
Sbjct: 100 VEKIKKLPLLKGHPQCPEHGENLKLFSKPDGKLICFQCKDARLSVGQSKEFLQISDAVHF 159
Query: 118 VRSGLITQNRQ 128
L Q Q
Sbjct: 160 FTEELAIQQGQ 170
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 122 bits (306), Expect = 4e-28
Identities = 70/193 (36%), Positives = 107/193 (55%), Gaps = 4/193 (2%)
Query: 83 KILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRSGLITQNRQDLAERFDVSVCILG 142
++L + ++ + D+ LD DTA + L++S+D + V G Q D ERF +LG
Sbjct: 290 RVLGLREILKTYAADVRLDPDTAYSRLIVSEDRKRVHYGDTNQKLPDNPERFYRYNIVLG 349
Query: 143 SPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQLTTELGFWTVSLRDGSRLSASTV 202
S + GRHYWEV+VG +EW LGVC+++V K + L+ GFW + LR G+ A T
Sbjct: 350 SQCISSGRHYWEVEVGDRSEWGLGVCKQNVDRKEVVYLSPHYGFWVIRLRKGNEYRAGTD 409
Query: 203 PLTFLLVDRKLQRVGIFLDMGMQNVSFFD-AESGSHVYTFRSVSAEEPLRPFLAP--SIP 259
L + +RVGIF+D ++SF++ + GSH++TF L P+ +P SI
Sbjct: 410 EYPILSLPVPPRRVGIFVDYEAHDISFYNVTDCGSHIFTFPRYPFPGRLLPYFSPCYSIG 469
Query: 260 PNGDQGVLSICPL 272
N + L+IC L
Sbjct: 470 TN-NTAPLAICSL 481
Score = 51.6 bits (122), Expect = 8e-07
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 7 EASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGED----LLCCCCSMVSQRNKIR 62
E +CP+C +L +PMS++CG + C C++ L + P GE C C Q +R
Sbjct: 12 EEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIP-GESQNWGYTCPLCRAPVQPRNLR 70
Query: 63 PNRQLERLVSHIKEL 77
PN QL +V ++ L
Sbjct: 71 PNWQLANVVEKVRLL 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,070,863
Number of Sequences: 37866
Number of extensions: 482283
Number of successful extensions: 1896
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1441
Number of HSP's gapped (non-prelim): 320
length of query: 288
length of database: 18,247,518
effective HSP length: 101
effective length of query: 187
effective length of database: 14,423,052
effective search space: 2697110724
effective search space used: 2697110724
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.