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Search of human proteins with 56090582
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56090582 immunity-related GTPase family, Q [Homo sapiens]
(623 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56090582 immunity-related GTPase family, Q [Homo sapiens] 1241 0.0
gi|10257429 immunity-related GTPase family, cinema [Homo sapiens] 98 2e-20
gi|110832843 TBP-associated factor 4 [Homo sapiens] 46 9e-05
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 43 8e-04
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 42 0.001
gi|169217315 PREDICTED: hypothetical protein [Homo sapiens] 40 0.008
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] 40 0.008
gi|239752280 PREDICTED: similar to family with sequence similari... 40 0.008
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens] 40 0.008
gi|113430175 PREDICTED: hypothetical protein [Homo sapiens] 40 0.008
gi|210032463 family with sequence similarity 48, member B2 [Homo... 40 0.008
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 40 0.008
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 40 0.008
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens] 39 0.014
gi|126352608 elastin isoform e precursor [Homo sapiens] 39 0.014
gi|126352322 elastin isoform c precursor [Homo sapiens] 39 0.014
gi|126352700 elastin isoform b precursor [Homo sapiens] 39 0.014
gi|121582655 ankyrin repeat domain 35 [Homo sapiens] 39 0.014
gi|73476377 LBXCOR1 homolog [Homo sapiens] 39 0.019
gi|239756433 PREDICTED: hypothetical protein [Homo sapiens] 38 0.024
gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo ... 38 0.024
gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo ... 38 0.024
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re... 38 0.024
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 38 0.032
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 37 0.042
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 37 0.042
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 37 0.042
gi|116292174 fidgetin-like 2 [Homo sapiens] 37 0.042
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 37 0.042
gi|61966919 hypothetical protein LOC442444 [Homo sapiens] 37 0.042
>gi|56090582 immunity-related GTPase family, Q [Homo sapiens]
Length = 623
Score = 1241 bits (3211), Expect = 0.0
Identities = 623/623 (100%), Positives = 623/623 (100%)
Query: 1 MPPPQGDVTALFLGPPGLGKSALIAALCDKDVETLEAPEGRPDSGVPSLRAAGPGLFLGE 60
MPPPQGDVTALFLGPPGLGKSALIAALCDKDVETLEAPEGRPDSGVPSLRAAGPGLFLGE
Sbjct: 1 MPPPQGDVTALFLGPPGLGKSALIAALCDKDVETLEAPEGRPDSGVPSLRAAGPGLFLGE 60
Query: 61 LSCPPAAPGPWAAEANVLVLVLPGPEGNGEPLAPALGEAALAALARGTPLLAVRNLRPGD 120
LSCPPAAPGPWAAEANVLVLVLPGPEGNGEPLAPALGEAALAALARGTPLLAVRNLRPGD
Sbjct: 61 LSCPPAAPGPWAAEANVLVLVLPGPEGNGEPLAPALGEAALAALARGTPLLAVRNLRPGD 120
Query: 121 SQTAAQARDQTAALLNSAGLGAADLFVLPANCGSSDGCEELERLRAALQSQAEALRRLLP 180
SQTAAQARDQTAALLNSAGLGAADLFVLPANCGSSDGCEELERLRAALQSQAEALRRLLP
Sbjct: 121 SQTAAQARDQTAALLNSAGLGAADLFVLPANCGSSDGCEELERLRAALQSQAEALRRLLP 180
Query: 181 PAQDGFEVLGAAELEAVREAFETGGLEAALSWVRSGLERLGSARLDLAVAGKADVGLVVD 240
PAQDGFEVLGAAELEAVREAFETGGLEAALSWVRSGLERLGSARLDLAVAGKADVGLVVD
Sbjct: 181 PAQDGFEVLGAAELEAVREAFETGGLEAALSWVRSGLERLGSARLDLAVAGKADVGLVVD 240
Query: 241 MLLGLDPGDPGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDAL 300
MLLGLDPGDPGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDAL
Sbjct: 241 MLLGLDPGDPGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDAL 300
Query: 301 ILVTPGAPTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGG 360
ILVTPGAPTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGG
Sbjct: 301 ILVTPGAPTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGG 360
Query: 361 GLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDET 420
GLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDET
Sbjct: 361 GLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDET 420
Query: 421 WEVLEEAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAALRAG 480
WEVLEEAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAALRAG
Sbjct: 421 WEVLEEAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAALRAG 480
Query: 481 AWRPALLASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPTALARRERALGLASGE 540
AWRPALLASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPTALARRERALGLASGE
Sbjct: 481 AWRPALLASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPTALARRERALGLASGE 540
Query: 541 LAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAATGGLGYRAAHGV 600
LAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAATGGLGYRAAHGV
Sbjct: 541 LAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAATGGLGYRAAHGV 600
Query: 601 LLQALDEMRADAEAVLAPPEPAQ 623
LLQALDEMRADAEAVLAPPEPAQ
Sbjct: 601 LLQALDEMRADAEAVLAPPEPAQ 623
>gi|10257429 immunity-related GTPase family, cinema [Homo sapiens]
Length = 463
Score = 98.2 bits (243), Expect = 2e-20
Identities = 115/446 (25%), Positives = 180/446 (40%), Gaps = 62/446 (13%)
Query: 178 LLPPAQDGFEVLGAAELEAVREAFETGGLEAALSWVRSGLERLGSARLDLAVAGKADVG- 236
++P ++ ++ LEA+R AFE+G L A S ++ L S RL++ V G++ G
Sbjct: 8 VVPGEEENTILMAKERLEALRTAFESGDLPQAASHLQELLASTESIRLEVGVTGESGAGK 67
Query: 237 -LVVDMLLGLDPGDPGAAPASV---PTAPTPFPAPERPNVVLWTVP-LGHTG-TATTAAA 290
+++ L GL+ DPGAA V P+P+P P+ P+V LW +P G G A
Sbjct: 68 SSLINALRGLEAEDPGAALTGVMETTMQPSPYPHPQFPDVTLWDLPGAGSPGCPADKYLK 127
Query: 291 ASHPTHYDALILVTPGAPTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPK 350
+ YD +LV+P + +L VRT + E L + + P
Sbjct: 128 QVDFSRYDFFLLVSPRRCGAVETRLAAEILCQGKKFYFVRTKVD----EDLAATRTQRPS 183
Query: 351 GESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSER 410
G + A L + R+ C+ ++AG
Sbjct: 184 G--FREAA------VLQEIRDHCAERLREAGVA--------------------------- 208
Query: 411 AAALSPEDETWEVLEEAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAA 470
D ++ P + P L LP + A LL+LP S A
Sbjct: 209 -------DPRIFLVSNLSPARY-----DFPTLVSTWEHDLPSHRRHAGLLSLPDISLEAL 256
Query: 471 RTKAAALRAGAWRPALLASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPTALARR 530
+ K A L+ + AL+ + A P+PGL A D ALL L + R GL+ +LA+
Sbjct: 257 QKKKAMLQEQVLKTALVLGV-IQALPVPGLAAAYDDALLIHSLRGYHRSFGLDDDSLAKL 315
Query: 531 ERALGLASGELAARAHFP-GPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAAT 589
+G +G+L + P E RL + + +G A A P G
Sbjct: 316 AEQVGKQAGDLRSVIRSPLANEVSPETVLRLYSQSSDGAMRVAR--AFERGIPVFGTLVA 373
Query: 590 GGLGYRAAHGVLLQALDEMRADAEAV 615
GG+ + A + +L L+EM DA+ V
Sbjct: 374 GGISFGAVYTMLQGCLNEMAEDAQRV 399
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 46.2 bits (108), Expect = 9e-05
Identities = 48/155 (30%), Positives = 60/155 (38%), Gaps = 24/155 (15%)
Query: 349 PKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDS 408
P+ ++ A G L N + G +AG+ A EG A E G + GGG
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPE--PPPAGRARPGGGGP 102
Query: 409 ERAAALSPEDETWEVLEEAPPPVFPLRPG--GLPGLCEWLRRALPPAQAGALLLALPPAS 466
+R SP V PP LRP G G C P A A + A P +
Sbjct: 103 QRPGPPSPRRPL--VPAGPAPPAAKLRPPPEGSAGSCA-------PVPAAAAVAAGPEPA 153
Query: 467 PSAARTKAAALRAGAWRPALLASLAAAAAPLPGLG 501
P AG +PA A+LAA A P PG G
Sbjct: 154 P-----------AGPAKPAGPAALAARAGPGPGPG 177
Score = 33.5 bits (75), Expect = 0.60
Identities = 75/331 (22%), Positives = 102/331 (30%), Gaps = 58/331 (17%)
Query: 204 GGLEAALSWVRSGLERLGSARLDLAVAGKADVGLVVDMLLGLDPGDPGAAPASVPTAPTP 263
G LE+ L+ + L ++ A +G V + G G GA PA+ P P
Sbjct: 27 GSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHV--VSGSPAGAAGAGPAA-PAEGAP 83
Query: 264 FPAPERPNVVLWTVPLGHTGTATTAAAA-SHPTHYDALILVTPGAPTEKDWAQVQALLLP 322
APE P P G P+ L+ P P K +
Sbjct: 84 GAAPEPP-------PAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGS 136
Query: 323 DAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGS 382
AP+ G +P G K P + + G G G
Sbjct: 137 CAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPG--------------PGPGPGP 182
Query: 383 GEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEEAPPPVFPLRPGGLPGL 442
G GPGK G Q + + +S AAA + ++ P + PL PG
Sbjct: 183 GPGPGKPAGPGAAQTLN-GSAALLNSHHAAAPAVS-----LVNNGPAALLPLPKPAAPGT 236
Query: 443 C----EWLRRALPPAQAGA----------------------LLLALPPASPSAARTKAAA 476
++ A PPA A LA PP P+ T A A
Sbjct: 237 VIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA 296
Query: 477 LRAGAWRPALLASLAAAAAPLPGLGWACDVA 507
+ A S AA AP P G V+
Sbjct: 297 VPPPA-AAQNGGSAGAAPAPAPAAGGPAGVS 326
Score = 33.1 bits (74), Expect = 0.78
Identities = 53/211 (25%), Positives = 68/211 (32%), Gaps = 42/211 (19%)
Query: 252 AAPA-----SVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPG 306
AAPA + P A P P P P V+ T P AA S P P
Sbjct: 211 AAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPA------APAPA 264
Query: 307 APTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGGGLENAL 366
AP P AP R G P P + +N G G A
Sbjct: 265 APAAAPPPP------PPAPATLARPPGHPAGPPTAAPAV---PPPAAAQNGGSAGAAPAP 315
Query: 367 SKGREKCSAGSQKAGSGE-GPGKAG--------SEGLQQVV--------GMKKSGGGDSE 409
+ +AG SG+ GPG A +E ++VV + SG +
Sbjct: 316 AP-----AAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTA 370
Query: 410 RAAALSPEDETWEVLEEAPPPVFPLRPGGLP 440
+ + P + A PP P P GLP
Sbjct: 371 ASMVIGPTMQGALPSPAAVPPPAPGTPTGLP 401
Score = 29.6 bits (65), Expect = 8.7
Identities = 42/139 (30%), Positives = 47/139 (33%), Gaps = 15/139 (10%)
Query: 14 GPPGLGKSALIAALCDKDVETLEAPEGRPDSGVPS----------LRAAGPGLFLGELSC 63
G G G +A E A RP G P L AGP +L
Sbjct: 69 GAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRP 128
Query: 64 PPAAPGPWAAEANVLVLVLPGPEGNGEPLAPALGEAALAALARGTPLLAV-RNLRPGDSQ 122
PP A V GPE A G AALAA A P PG +
Sbjct: 129 PPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGK 188
Query: 123 T----AAQARDQTAALLNS 137
AAQ + +AALLNS
Sbjct: 189 PAGPGAAQTLNGSAALLNS 207
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 43.1 bits (100), Expect = 8e-04
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGS 391
+GEGE+ E GEG+ E +GE + G G E +G E+ G + EG G+
Sbjct: 832 EGEGEEEE--GEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEE 889
Query: 392 EGLQQVVGMKKSGGGDSERAAALSPEDETWE 422
EG + G ++ G G+ E E+E E
Sbjct: 890 EG--EGEGEEEEGEGEGEEEGEGEGEEEEGE 918
Score = 39.7 bits (91), Expect = 0.008
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 332 DGEGEDPECLGEGKMENP----KGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPG 387
+GEGE E GEGK E +GE + G G E+ +G E+ + GEG G
Sbjct: 907 EGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEG 966
Query: 388 KAGSEGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEE 426
+ EG G + G G+ E E+E E EE
Sbjct: 967 EEEGEG----EGEEGEGEGEEEEGEGEGEEEEGEEEGEE 1001
Score = 39.7 bits (91), Expect = 0.008
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSA---GSQKAGSGEGPGK 388
+GEGE E GEG+ E +GE G G E +G E+ G + GEG G+
Sbjct: 976 EGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGE 1035
Query: 389 AGSEGLQQVVGMKKSGGGDSERAAALSPEDE 419
EG ++ +K G G+ R E+E
Sbjct: 1036 E-EEGEEEGEEREKEGEGEENRRNREEEEEE 1065
Score = 39.3 bits (90), Expect = 0.011
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPG-KAG 390
+GE E E GEG+ E +GE + G G E E+ G + GEG G + G
Sbjct: 866 EGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEG 925
Query: 391 SEGLQQVVGMKKSGGGDSERAAALSPEDE-TWEVLEE 426
EG + G ++ G G+ E E+E WE EE
Sbjct: 926 EEG--EGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEE 960
Score = 36.2 bits (82), Expect = 0.093
Identities = 27/95 (28%), Positives = 39/95 (41%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGS 391
+G+GE E EG+ E +GE + G G E KG E+ G + EG G+
Sbjct: 821 EGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEE 880
Query: 392 EGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEE 426
E + + G G+ E E+ E EE
Sbjct: 881 EEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEE 915
Score = 35.4 bits (80), Expect = 0.16
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGS 391
+GEGE E GEG+ E +GE + G G E +G E+ + GEG G+
Sbjct: 961 EGEGEGEE-EGEGEGEEGEGEGEEEEGEG--EGEEEEGEEEGEEEGEGEEEGEGEGEEEE 1017
Query: 392 EG--LQQVVGMKKSGGGDSERAAALSPEDE 419
EG +V G + G G+ E E E
Sbjct: 1018 EGEVEGEVEGEEGEGEGEEEEGEEEGEERE 1047
Score = 32.7 bits (73), Expect = 1.0
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 335 GEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGL 394
GE E GE + E +GE + G G E + E G ++ GEG + G EG
Sbjct: 817 GEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGE-EEGEEG- 874
Query: 395 QQVVGMKKSGGGDSERAAALSPEDETWE 422
+ G ++ G G+ E E+E E
Sbjct: 875 -EGEGEEEEGEGEGEEEGEGEGEEEEGE 901
Score = 31.6 bits (70), Expect = 2.3
Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 334 EGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEG 393
EGE+ E GEG+ E +GE + G G E +G E+ + GEG + EG
Sbjct: 956 EGEEEEGEGEGEEEG-EGEGEEGEGEGEEEEGEGEGEEE-EGEEEGEEEGEGEEEGEGEG 1013
Query: 394 LQQVVGMKKSGGGDSERAAALSPEDETWEVLEE 426
++ G + G + E E+E E EE
Sbjct: 1014 EEEEEG-EVEGEVEGEEGEGEGEEEEGEEEGEE 1045
Score = 31.2 bits (69), Expect = 3.0
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 330 RTDGEGEDPECL-----GEGKMEN-----PKGESLKNAGGGGLENALSKGREKCSAGSQK 379
+ +GEGE+ E GE K E KGE + G G E +G EK G +
Sbjct: 756 KEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVE 815
Query: 380 AGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDE 419
G E E ++ G ++ G G+ E E E
Sbjct: 816 GGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGE 855
Score = 30.8 bits (68), Expect = 3.9
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 336 EDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQ 395
E+ E GEGK E +GE ++ G E + +++ AG ++ G EG G E
Sbjct: 747 EEEEKEGEGKEEG-EGEEVE----GEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEET 801
Query: 396 QVVGMKKSGGGDSERAAALSPEDETWEVLEE 426
+ G +K GG+ E + E E EE
Sbjct: 802 EGRGEEKEEGGEVEGGEVEEGKGEREEEEEE 832
Score = 29.6 bits (65), Expect = 8.7
Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 14/98 (14%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENAL---SKGREKCSAGSQKAGSGEGPGK 388
+GEG++ EG+ E +GE K G E KG E+ G + EG G+
Sbjct: 752 EGEGKE-----EGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGE 806
Query: 389 AGSEGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEE 426
EG + G + G G+ E E+E E EE
Sbjct: 807 EKEEGGEVEGGEVEEGKGEREE------EEEEGEGEEE 838
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 42.4 bits (98), Expect = 0.001
Identities = 94/366 (25%), Positives = 127/366 (34%), Gaps = 67/366 (18%)
Query: 245 LDPGDPGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALIL-V 303
L PG P P P TP P P P V P T + AS T YD+ + +
Sbjct: 1584 LTPGPPHPLP-DTPAPATPLP-PVPPPAVAAAPP-------TLDSTASSLTSYDSEVATL 1634
Query: 304 TPGAPTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGGGLE 363
T GA P AP G P G + +++ LE
Sbjct: 1635 TQGASAAPGDPHPPGPPAPAAPAPAAPQPGPDPPP-----GTDSGIEEVDSRSSSDHPLE 1689
Query: 364 NALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPE--DETW 421
SA + + S EG G AG GGG + A PE D
Sbjct: 1690 TI-------SSASTLSSLSAEGGGSAG-------------GGGGAGAGVASGPELLDTYV 1729
Query: 422 EVLE-------EAPPPVFP---LRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAAR 471
L+ P P +P + P L G L P +G L + P SP+ +
Sbjct: 1730 AYLDGQAFGGSSTPGPPYPPQLMTPSKLRGRALGASGGLRPGPSGGLRDPVTPTSPTVSV 1789
Query: 472 TKAA-----ALRAGAWRP-ALLASLAAAAAP-LPGLGWACDVALLRGQLAEWRRGLGLEP 524
T A ALRA + P A +A A P +P + +L R +L W G G P
Sbjct: 1790 TGAGTDGLLALRACSGPPTAGVAGGPVAVEPEVPPVPLPTASSLPR-KLLPWEEGPGPPP 1848
Query: 525 TALARRERALGLASGELAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAG 584
L LA + +A A + +E+ ++L + G AGGA W G
Sbjct: 1849 PPLPG-----PLAQPQASALATVKASII-SELSSKLQQFGGSSAAGGA------LPWARG 1896
Query: 585 GAAATG 590
G+ G
Sbjct: 1897 GSGGGG 1902
Score = 30.8 bits (68), Expect = 3.9
Identities = 55/220 (25%), Positives = 72/220 (32%), Gaps = 36/220 (16%)
Query: 250 PGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPGAPT 309
P APA P P+P P P P +G AT + + A ++ GA
Sbjct: 1198 PSPAPAMSPVPPSPSPVP---------TPASPSGPAT----LDFTSQFGAALV---GAAR 1241
Query: 310 EKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKG 369
+ Q +A L D +G D LG G P+ K+ G
Sbjct: 1242 REGGWQNEARRRSTLFLSTDAGDEDGGDGG-LGTGAAPGPRLRHSKSIDEGMFSAEPYLR 1300
Query: 370 REKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEEAPP 429
E +G+ G G G G GGG S + L P + +A
Sbjct: 1301 LESAGSGAGYGGYGAGSRAYG------------GGGGSSAFTSFLPPRPLVHPLTGKALD 1348
Query: 430 PVFPLRPGGLPGLCEWLR-RALPPAQAGALLLALPPASPS 468
P PL GL R RAL + G PP PS
Sbjct: 1349 PASPL------GLALAARERALKESSEGGGAPQPPPRPPS 1382
>gi|169217315 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 39.7 bits (91), Expect = 0.008
Identities = 70/255 (27%), Positives = 88/255 (34%), Gaps = 60/255 (23%)
Query: 373 CSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDETWE---------- 422
C + + K GS G S + +G ++ G + RA A +P
Sbjct: 265 CRSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRAHRAIAPTPGSLCGNRSRACGAIAL 324
Query: 423 -------VLEEAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAA 475
V P + P PG L G W+ RA+ P GAL A + RT A
Sbjct: 325 TPGVLCGVRSRVPKDITPT-PGALRGYKSWVCRAIAPT-PGALRGDRSAARTAVVRTPGA 382
Query: 476 -------ALRAGAWRPALL----ASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEP 524
A A A P L +S++ A AP PG LRG + R P
Sbjct: 383 LGRDRSRARSAIASTPGTLQGNRSSVSKAIAPTPG--------ALRGDRSAARTAFVPTP 434
Query: 525 TALAR-RERA-----------LGLASGELAARAHFPGPV------TRAEVEARLGAWAG- 565
AL R R RA G S A A PG + R + GAW G
Sbjct: 435 GALHRDRSRARSAIASTPGTLRGNTSSACKAIAPTPGALRGYKSWARRAIAPNPGAWRGY 494
Query: 566 ---EGTAGGAALGAL 577
GTA LGAL
Sbjct: 495 RSTTGTAIAPNLGAL 509
Score = 29.6 bits (65), Expect = 8.7
Identities = 54/188 (28%), Positives = 70/188 (37%), Gaps = 38/188 (20%)
Query: 436 PGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAALRAGAWRPALL-------- 487
PG L G W RRA+ P P + S+ R+++ R A PA L
Sbjct: 524 PGALRGYRSWTRRAIAPT----------PGTLSSYRSRSR--RTIASTPATLRGEKSRAH 571
Query: 488 ASLAAAAAPLPGLGWACDVALL--RGQLAE-WRR-GLGLEPTALARR------ERALGLA 537
SLA L G G A++ L E W R G+G+ P A A R RA+
Sbjct: 572 TSLAPTPGALRGDGSRARRAIVPTTCPLCEIWSRVGIGIAPIADALRRDRSPVRRAIAPT 631
Query: 538 SGELA--------ARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAAT 589
G L+ A A PG + +R + T G A + L PA GA
Sbjct: 632 PGTLSGYRSRARTAIAPTPGTLRGYRPRSRRAIASTPATLRGEKSRAHTSLAPAPGALRG 691
Query: 590 GGLGYRAA 597
G R A
Sbjct: 692 DGSRARRA 699
>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 39.7 bits (91), Expect = 0.008
Identities = 66/254 (25%), Positives = 87/254 (34%), Gaps = 58/254 (22%)
Query: 373 CSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDETWE---------- 422
C + + K GS G S + +G ++ G + RA A +P
Sbjct: 265 CRSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRAHRAIAPTPGSLCGNRSRACGAIAL 324
Query: 423 -------VLEEAPPPVFPLRPGGLPGLCEWLRRALPP------AQAGALLLALPPASPSA 469
V P + P PG L G W+ RA+ P A A+ +
Sbjct: 325 TPGVLCGVRSRVPKDITPT-PGALRGYKSWVCRAIAPTPGALRGDRSAARTAIVRTPGAL 383
Query: 470 ARTKAAALRAGAWRPALL----ASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPT 525
R ++ A A A P L +S++ A AP PG LRG + R P
Sbjct: 384 GRDRSRARSAIASTPGTLQGNRSSVSKAIAPAPG--------ALRGDRSAARTAFVPTPG 435
Query: 526 ALAR-RERA-----------LGLASGELAARAHFPGPV------TRAEVEARLGAWAG-- 565
AL R R RA G S A A PG + R + GAW G
Sbjct: 436 ALHRDRSRARSAIASTPGTLRGNTSSACKAIAPTPGALRGYKSWARRAIAPNPGAWRGYR 495
Query: 566 --EGTAGGAALGAL 577
GTA LGAL
Sbjct: 496 STTGTAIAPNLGAL 509
Score = 29.6 bits (65), Expect = 8.7
Identities = 54/188 (28%), Positives = 70/188 (37%), Gaps = 38/188 (20%)
Query: 436 PGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAALRAGAWRPALL-------- 487
PG L G W RRA+ P P + S+ R+++ R A PA L
Sbjct: 524 PGALRGYRSWTRRAIAPT----------PGTLSSYRSRSR--RTIASTPATLRGEKSRAH 571
Query: 488 ASLAAAAAPLPGLGWACDVALL--RGQLAE-WRR-GLGLEPTALARR------ERALGLA 537
SLA L G G A++ L E W R G+G+ P A A R RA+
Sbjct: 572 TSLAPTPGALRGDGSRARRAIVPTTCPLCEIWSRVGIGIAPIADALRRDRSPVRRAIAPT 631
Query: 538 SGELA--------ARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAAT 589
G L+ A A PG + +R + T G A + L PA GA
Sbjct: 632 PGTLSGYRSRARTAIAPTPGTLRGYRPRSRRAIASTPATLRGEKSRAHTSLAPAPGALRG 691
Query: 590 GGLGYRAA 597
G R A
Sbjct: 692 DGSRARRA 699
>gi|239752280 PREDICTED: similar to family with sequence similarity
48, member B2 [Homo sapiens]
Length = 779
Score = 39.7 bits (91), Expect = 0.008
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 24/198 (12%)
Query: 379 KAGSGEGPGKAGSEGLQQVVGMKKSGG--GDSERAAALSPEDETWEVLEEAPPPVF---- 432
+ GS G+A S+ + V K G S A + +W+ E+ P PV+
Sbjct: 356 RPGSETDAGRAVSQAQESVQSKVKGPGKMSHSSSGPASVSQLSSWKTPEQ-PDPVWVQSS 414
Query: 433 --------PLRPGGLPGLCEWLR--RALPPAQAGA-LLLALPPASPSAARTKAAALRAGA 481
P LP + + PP QAG+ L P A+P+ A A A A
Sbjct: 415 VSGKGEKHPPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPA 474
Query: 482 WRPALLASLAAAAA--PLPGLGWACDVALLRGQLAEWRRGLGLEPTALARRERALGLASG 539
PAL A+ AAAA P V L++ A RR PT + A+ + +G
Sbjct: 475 AAPALAAAAVAAAAGGAAPSHSQKPSVPLIK---ASRRRPAAGRPTRFVKIAPAIQVRTG 531
Query: 540 ELAARA-HFPGPVTRAEV 556
+A + GPV A+V
Sbjct: 532 STGLKATNVEGPVRGAQV 549
Score = 30.4 bits (67), Expect = 5.1
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 250 PGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPGAPT 309
P AAPA AP P PAP P AA + P+H + A
Sbjct: 456 PAAAPAVAAAAPAPAPAPA-------AAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASR 508
Query: 310 EKDWAQVQALLLPDAPLVCVRTDGEG 335
+ A + AP + VRT G
Sbjct: 509 RRPAAGRPTRFVKIAPAIQVRTGSTG 534
>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2028
Score = 39.7 bits (91), Expect = 0.008
Identities = 66/254 (25%), Positives = 87/254 (34%), Gaps = 58/254 (22%)
Query: 373 CSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDETWE---------- 422
C + + K GS G S + +G ++ G + RA A +P
Sbjct: 265 CRSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRAHRAIAPTPGSLCGNRSRACGAIAL 324
Query: 423 -------VLEEAPPPVFPLRPGGLPGLCEWLRRALPP------AQAGALLLALPPASPSA 469
V P + P PG L G W+ RA+ P A A+ +
Sbjct: 325 TPGVLCGVRSRVPKDITPT-PGALRGYKSWVCRAIAPTPGALRGDRSAARTAIVRTPGAL 383
Query: 470 ARTKAAALRAGAWRPALL----ASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPT 525
R ++ A A A P L +S++ A AP PG LRG + R P
Sbjct: 384 GRDRSRARSAIASTPGTLQGNRSSVSKAIAPAPG--------ALRGDRSAARTAFVPTPG 435
Query: 526 ALAR-RERA-----------LGLASGELAARAHFPGPV------TRAEVEARLGAWAG-- 565
AL R R RA G S A A PG + R + GAW G
Sbjct: 436 ALHRDRSRARSAIASTPGTLRGNTSSACKAIAPTPGALRGYKSWARRAIAPNPGAWRGYR 495
Query: 566 --EGTAGGAALGAL 577
GTA LGAL
Sbjct: 496 STTGTAIAPNLGAL 509
Score = 31.2 bits (69), Expect = 3.0
Identities = 44/160 (27%), Positives = 58/160 (36%), Gaps = 34/160 (21%)
Query: 436 PGGLPGLCEWLRRALPPA--------QAGALLLALPPASPSAARTKA---AALRAGAWRP 484
PG L G W RRA+ P +A PA+ +++A A GA R
Sbjct: 524 PGALRGYRSWTRRAIAPTPGTLSSYRSRSRRTIASTPATLRGEKSRAHTSLAPTPGALRD 583
Query: 485 AL---LASLAAAAAPLPG----------LGWACDVALLRGQLAEWRRGLGLEPTAL---- 527
AL + + A AP PG A LRG RR + P L
Sbjct: 584 ALRRDRSPVRRAIAPTPGTLSGYRSRARTAIAPTPGTLRGYRPRSRRAIASTPATLRGEK 643
Query: 528 ARRERALGLASGEL------AARAHFPGPVTRAEVEARLG 561
+R +L A G L A RA P E+ +R+G
Sbjct: 644 SRAHTSLAPAPGALRGDGSRARRAIVPTTCPLCEIWSRVG 683
>gi|113430175 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1934
Score = 39.7 bits (91), Expect = 0.008
Identities = 66/254 (25%), Positives = 87/254 (34%), Gaps = 58/254 (22%)
Query: 373 CSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDETWE---------- 422
C + + K GS G S + +G ++ G + RA A +P
Sbjct: 265 CRSIAPKPGSLCGDRSQASRAIDPTLGARRGGRSRAHRAIAPTPGSLCGNRSRACGAIAL 324
Query: 423 -------VLEEAPPPVFPLRPGGLPGLCEWLRRALPP------AQAGALLLALPPASPSA 469
V P + P PG L G W+ RA+ P A A+ +
Sbjct: 325 TPGVLCGVRSRVPKDITPT-PGALRGYKSWVCRAIAPTPGALRGDRSAARTAIVRTPGAL 383
Query: 470 ARTKAAALRAGAWRPALL----ASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPT 525
R ++ A A A P L +S++ A AP PG LRG + R P
Sbjct: 384 GRDRSRARSAIASTPGTLQGNRSSVSKAIAPAPG--------ALRGDRSAARTAFVPTPG 435
Query: 526 ALAR-RERA-----------LGLASGELAARAHFPGPV------TRAEVEARLGAWAG-- 565
AL R R RA G S A A PG + R + GAW G
Sbjct: 436 ALHRDRSRARSAIASTPGTLRGNTSSACKAIAPTPGALRGYKSWARRAIAPNPGAWRGYR 495
Query: 566 --EGTAGGAALGAL 577
GTA LGAL
Sbjct: 496 STTGTAIAPNLGAL 509
>gi|210032463 family with sequence similarity 48, member B2 [Homo
sapiens]
Length = 817
Score = 39.7 bits (91), Expect = 0.008
Identities = 55/198 (27%), Positives = 79/198 (39%), Gaps = 24/198 (12%)
Query: 379 KAGSGEGPGKAGSEGLQQVVGMKKSGG--GDSERAAALSPEDETWEVLEEAPPPVF---- 432
+ GS G+A S+ + V K G S A + +W+ E+ P PV+
Sbjct: 394 RPGSETDAGRAVSQAQESVQSKVKGPGKMSHSSSGPASVSQLSSWKTPEQ-PDPVWVQSS 452
Query: 433 --------PLRPGGLPGLCEWLR--RALPPAQAGA-LLLALPPASPSAARTKAAALRAGA 481
P LP + + PP QAG+ L P A+P+ A A A A
Sbjct: 453 VSGKGEKHPPPRTQLPSSSGKISSGNSFPPQQAGSPLKRPFPAAAPAVAAAAPAPAPAPA 512
Query: 482 WRPALLASLAAAAA--PLPGLGWACDVALLRGQLAEWRRGLGLEPTALARRERALGLASG 539
PAL A+ AAAA P V L++ A RR PT + A+ + +G
Sbjct: 513 AAPALAAAAVAAAAGGAAPSHSQKPSVPLIK---ASRRRPAAGRPTRFVKIAPAIQVRTG 569
Query: 540 ELAARA-HFPGPVTRAEV 556
+A + GPV A+V
Sbjct: 570 STGLKATNVEGPVRGAQV 587
Score = 30.4 bits (67), Expect = 5.1
Identities = 24/86 (27%), Positives = 30/86 (34%), Gaps = 7/86 (8%)
Query: 250 PGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPGAPT 309
P AAPA AP P PAP P AA + P+H + A
Sbjct: 494 PAAAPAVAAAAPAPAPAPA-------AAPALAAAAVAAAAGGAAPSHSQKPSVPLIKASR 546
Query: 310 EKDWAQVQALLLPDAPLVCVRTDGEG 335
+ A + AP + VRT G
Sbjct: 547 RRPAAGRPTRFVKIAPAIQVRTGSTG 572
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 39.7 bits (91), Expect = 0.008
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGS 391
D E ED G E ESL + GG + S S G+ + SG+G GK G
Sbjct: 103 DEEEEDESSSSGGGEEESSAESLVGSSGG----SSSDETRSLSPGAASSSSGDGDGKEGL 158
Query: 392 EGLQQVVGMKKSGGGDSERAAALS 415
E + G + GGG S ++ +S
Sbjct: 159 EEPKGPRGSQGGGGGGSSSSSVVS 182
Score = 31.2 bits (69), Expect = 3.0
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 342 GEGK--MENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVG 399
G+GK +E PKG GGGG S S G + G+G G A S G + +
Sbjct: 152 GDGKEGLEEPKGPRGSQGGGGG---GSSSSSVVSSGGDEGYGTGGGGSSATSGGRRGSLE 208
Query: 400 MKKSG 404
M G
Sbjct: 209 MSSDG 213
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 39.7 bits (91), Expect = 0.008
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGS 391
D E ED G E ESL + GG + S S G+ + SG+G GK G
Sbjct: 103 DEEEEDESSSSGGGEEESSAESLVGSSGG----SSSDETRSLSPGAASSSSGDGDGKEGL 158
Query: 392 EGLQQVVGMKKSGGGDSERAAALS 415
E + G + GGG S ++ +S
Sbjct: 159 EEPKGPRGSQGGGGGGSSSSSVVS 182
Score = 31.2 bits (69), Expect = 3.0
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 342 GEGK--MENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVG 399
G+GK +E PKG GGGG S S G + G+G G A S G + +
Sbjct: 152 GDGKEGLEEPKGPRGSQGGGGG---GSSSSSVVSSGGDEGYGTGGGGSSATSGGRRGSLE 208
Query: 400 MKKSG 404
M G
Sbjct: 209 MSSDG 213
>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
Length = 832
Score = 38.9 bits (89), Expect = 0.014
Identities = 31/75 (41%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 449 ALPPAQAGALLLALPPASPSAARTKAAALRAGAWRPALLASLAAAAAPLPGLGWACDVAL 508
ALPP A ALPPA P + AAA +GA PA A AA A PG G + +A+
Sbjct: 24 ALPPQPA-----ALPPAPPQGSPCAAAAGGSGACGPA-TAVAAAGTAEGPGGGGSARIAV 77
Query: 509 LRGQLAEWRRGLGLE 523
+ QL R LE
Sbjct: 78 KKAQLRSAPRAKKLE 92
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 38.9 bits (89), Expect = 0.014
Identities = 94/377 (24%), Positives = 124/377 (32%), Gaps = 53/377 (14%)
Query: 250 PGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPGAP- 308
PG A VP P P + +G A AAAA+ Y A + PG P
Sbjct: 275 PGVGGAGVPGVPGAIPG------IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPG 328
Query: 309 -----TEKDWAQVQALLLPDAPLVCVRTDG-------EGEDPECLGEGKMENPKGESLKN 356
A V + +P A + V G PE + + K +
Sbjct: 329 FGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPG 388
Query: 357 AGGGGLENALSKGREKCSAGSQKAG-SGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALS 415
G GG+ + G G G G G G G+ V G+ G +S
Sbjct: 389 VGVGGIP----------TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 438
Query: 416 PEDETWEVLEEAPPPVFP---LRP--GGLPGLCEWLRRALPPAQAGALLLALPP---ASP 467
PE + + A + P + P G PG+ L P A + + P +P
Sbjct: 439 PEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAP 498
Query: 468 SAARTKAAALRAGAWRPALLASLAAAA---APLPGLGWACDVALLRGQLAEWRRGLGLEP 524
AA A + A A L AAA A +PGLG V L G G+
Sbjct: 499 GIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-------GVGAGVPG 551
Query: 525 TALARRERALGLASGELAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAG 584
+ G G LAA V LGA G G GG +GA PA
Sbjct: 552 LGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGG-VVGA----GPAA 606
Query: 585 GAAATGGLGYRAAHGVL 601
AAA A G++
Sbjct: 607 AAAAAKAAAKAAQFGLV 623
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 38.9 bits (89), Expect = 0.014
Identities = 94/377 (24%), Positives = 124/377 (32%), Gaps = 53/377 (14%)
Query: 250 PGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPGAP- 308
PG A VP P P + +G A AAAA+ Y A + PG P
Sbjct: 280 PGVGGAGVPGVPGAIPG------IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPG 333
Query: 309 -----TEKDWAQVQALLLPDAPLVCVRTDG-------EGEDPECLGEGKMENPKGESLKN 356
A V + +P A + V G PE + + K +
Sbjct: 334 FGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPG 393
Query: 357 AGGGGLENALSKGREKCSAGSQKAG-SGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALS 415
G GG+ + G G G G G G G+ V G+ G +S
Sbjct: 394 VGVGGIP----------TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 443
Query: 416 PEDETWEVLEEAPPPVFP---LRP--GGLPGLCEWLRRALPPAQAGALLLALPP---ASP 467
PE + + A + P + P G PG+ L P A + + P +P
Sbjct: 444 PEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAP 503
Query: 468 SAARTKAAALRAGAWRPALLASLAAAA---APLPGLGWACDVALLRGQLAEWRRGLGLEP 524
AA A + A A L AAA A +PGLG V L G G+
Sbjct: 504 GIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-------GVGAGVPG 556
Query: 525 TALARRERALGLASGELAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAG 584
+ G G LAA V LGA G G GG +GA PA
Sbjct: 557 LGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGG-VVGA----GPAA 611
Query: 585 GAAATGGLGYRAAHGVL 601
AAA A G++
Sbjct: 612 AAAAAKAAAKAAQFGLV 628
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 38.9 bits (89), Expect = 0.014
Identities = 94/377 (24%), Positives = 124/377 (32%), Gaps = 53/377 (14%)
Query: 250 PGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPGAP- 308
PG A VP P P + +G A AAAA+ Y A + PG P
Sbjct: 265 PGVGGAGVPGVPGAIPG------IGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPGGPG 318
Query: 309 -----TEKDWAQVQALLLPDAPLVCVRTDG-------EGEDPECLGEGKMENPKGESLKN 356
A V + +P A + V G PE + + K +
Sbjct: 319 FGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKYGARPG 378
Query: 357 AGGGGLENALSKGREKCSAGSQKAG-SGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALS 415
G GG+ + G G G G G G G+ V G+ G +S
Sbjct: 379 VGVGGIP----------TYGVGAGGFPGFGVGVGGIPGVAGVPGVGGVPGVGGVPGVGIS 428
Query: 416 PEDETWEVLEEAPPPVFP---LRP--GGLPGLCEWLRRALPPAQAGALLLALPP---ASP 467
PE + + A + P + P G PG+ L P A + + P +P
Sbjct: 429 PEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAP 488
Query: 468 SAARTKAAALRAGAWRPALLASLAAAA---APLPGLGWACDVALLRGQLAEWRRGLGLEP 524
AA A + A A L AAA A +PGLG V L G G+
Sbjct: 489 GIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGLGVGVGVPGL-------GVGAGVPG 541
Query: 525 TALARRERALGLASGELAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAG 584
+ G G LAA V LGA G G GG +GA PA
Sbjct: 542 LGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIPGG-VVGA----GPAA 596
Query: 585 GAAATGGLGYRAAHGVL 601
AAA A G++
Sbjct: 597 AAAAAKAAAKAAQFGLV 613
>gi|121582655 ankyrin repeat domain 35 [Homo sapiens]
Length = 1001
Score = 38.9 bits (89), Expect = 0.014
Identities = 55/198 (27%), Positives = 76/198 (38%), Gaps = 18/198 (9%)
Query: 386 PGKAGSEGLQQVVGMKKSGGGDSERAAALSPED-ETWEVLEEAPPPVFPLRPGGLPGLCE 444
P SE +++ G + + G A P+ + ++ V + PGG
Sbjct: 428 PQSPASETIRKATGQQLTTNG----AQTFGPDHADQLPAGQKESSQVLGVEPGGT----- 478
Query: 445 WLRRALPPAQAGALLLALPPASPSAARTKAAALRAGAWRPALLASLAAAAAPLPGLGWAC 504
+ + PA LLL L + R K AA R RP + +L A W
Sbjct: 479 -VAEPVGPAAMNQLLLQLREELAAVWREKDAA-RGALSRPVMEGALGTPRAEAAAAAWEK 536
Query: 505 DVALLRGQLA--EWRR-GLGLEPTALAR--RERALGLASGELAARAHFPGPVTRAEVEAR 559
A L LA EW + GL ++P ++ RE AL A G + V A E
Sbjct: 537 MEARLERVLARLEWAKAGLQVKPEVPSQESREGALKAAPGSIKQDEEKEKRVPGARGEP- 595
Query: 560 LGAWAGEGTAGGAALGAL 577
LGA GE GG A G L
Sbjct: 596 LGALGGEKALGGLAKGQL 613
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 38.5 bits (88), Expect = 0.019
Identities = 53/184 (28%), Positives = 66/184 (35%), Gaps = 32/184 (17%)
Query: 336 EDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQ 395
+D LG G+ PKG +GGGG AG+G G G G+ L
Sbjct: 365 KDDPVLGAGE---PKGGPGTGSGGGG------------------AGTGGGAGGPGASHLP 403
Query: 396 QVVGMKKSGG----GDSERAAALSPEDETWEVLEEAPPPVFPLRPGGLPGLCEWLRRALP 451
G GG G AA +D A V+P P P + P
Sbjct: 404 PGAGAGPGGGAMFWGHQPSGAA---KDAAAVAAAAAAATVYPTFPMFWPAAGSLPVPSYP 460
Query: 452 PAQAGALLLALPPASPSAARTKAAALRAGAWRPALLASLAAAAAPLPGLGWACDVALLRG 511
AQ+ A +A A+ +AA AA AG+ P L A G C AL RG
Sbjct: 461 AAQSQAKAVAAAVAAAAAA----AAAAAGSGAPEPLDGAEPAKESGLGAEERCPSALSRG 516
Query: 512 QLAE 515
L E
Sbjct: 517 PLDE 520
Score = 31.6 bits (70), Expect = 2.3
Identities = 68/279 (24%), Positives = 90/279 (32%), Gaps = 57/279 (20%)
Query: 376 GSQKAGSGEGP-------GKAGSEGLQQVVGMKKSGGGDSERAAALSP-EDETWEVLEEA 427
G +A GP G + G G GGG R+ + P + + +L++
Sbjct: 285 GEDEAAGPPGPPPPHPQRGLGLATGASGPAGPGGPGGGAGVRSYPVIPVPSKGFGLLQKL 344
Query: 428 PPPVFPLRPGGLP---GLCEWLRRALPPAQAGALLLALPPASPSAARTKAAALRAGAWRP 484
PPP+FP P G P GLC P L P P A G
Sbjct: 345 PPPLFP-HPYGFPTAFGLC-------PKKDDPVLGAGEPKGGPGTGSGGGGAGTGGGAGG 396
Query: 485 ALLASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPTALARRERALGLASGELAAR 544
+ L A PG G W G +P+ A+ A+ A+
Sbjct: 397 PGASHLPPGAGAGPG-----------GGAMFW----GHQPSGAAKDAAAVAAAAAAATVY 441
Query: 545 AHFP-------------GPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGA--AAT 589
FP P +++ +A A A A AA G+ P GA A
Sbjct: 442 PTFPMFWPAAGSLPVPSYPAAQSQAKAVAAAVAAAAAAAAAAAGS-GAPEPLDGAEPAKE 500
Query: 590 GGLG--YRAAHGVLLQALDEMRADAE-----AVLAPPEP 621
GLG R + LDE D A L PP P
Sbjct: 501 SGLGAEERCPSALSRGPLDEDGTDEALPPPLAPLPPPPP 539
>gi|239756433 PREDICTED: hypothetical protein [Homo sapiens]
Length = 513
Score = 38.1 bits (87), Expect = 0.024
Identities = 40/149 (26%), Positives = 55/149 (36%), Gaps = 12/149 (8%)
Query: 358 GGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPE 417
G GG AL++ ++ +G GP A Q++G+ G + AA + E
Sbjct: 161 GRGGAGQALAQVERGAVGRAEDLQAGAGPRGAAEAQAPQLLGV-----GSAGLAAVVGDE 215
Query: 418 DETWEVLEEAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAAL 477
+ + P + R GGLP + G L A P AA A L
Sbjct: 216 AQALAAGSQRPQGLGRARHGGLPAPQHAVAVEQQRVHVGQQRLCPLGAQPHAAGVVATGL 275
Query: 478 R-------AGAWRPALLASLAAAAAPLPG 499
R A A R LLA+ A P PG
Sbjct: 276 RRRHRRPPAAAARRPLLAAARRGALPAPG 304
>gi|239750970 PREDICTED: hypothetical protein XP_002347634 [Homo
sapiens]
Length = 513
Score = 38.1 bits (87), Expect = 0.024
Identities = 40/149 (26%), Positives = 55/149 (36%), Gaps = 12/149 (8%)
Query: 358 GGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPE 417
G GG AL++ ++ +G GP A Q++G+ G + AA + E
Sbjct: 161 GRGGAGQALAQVERGAVGRAEDLQAGAGPRGAAEAQAPQLLGV-----GSAGLAAVVGDE 215
Query: 418 DETWEVLEEAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAAL 477
+ + P + R GGLP + G L A P AA A L
Sbjct: 216 AQALAAGSQRPQGLGRARHGGLPAPQHAVAVEQQRVHVGQQRLCPLGAQPHAAGVVATGL 275
Query: 478 R-------AGAWRPALLASLAAAAAPLPG 499
R A A R LLA+ A P PG
Sbjct: 276 RRRHRRPPAAAARRPLLAAARRGALPAPG 304
>gi|239745376 PREDICTED: hypothetical protein XP_002343484 [Homo
sapiens]
Length = 513
Score = 38.1 bits (87), Expect = 0.024
Identities = 40/149 (26%), Positives = 55/149 (36%), Gaps = 12/149 (8%)
Query: 358 GGGGLENALSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPE 417
G GG AL++ ++ +G GP A Q++G+ G + AA + E
Sbjct: 161 GRGGAGQALAQVERGAVGRAEDLQAGAGPRGAAEAQAPQLLGV-----GSAGLAAVVGDE 215
Query: 418 DETWEVLEEAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAAL 477
+ + P + R GGLP + G L A P AA A L
Sbjct: 216 AQALAAGSQRPQGLGRARHGGLPAPQHAVAVEQQRVHVGQQRLCPLGAQPHAAGVVATGL 275
Query: 478 R-------AGAWRPALLASLAAAAAPLPG 499
R A A R LLA+ A P PG
Sbjct: 276 RRRHRRPPAAAARRPLLAAARRGALPAPG 304
>gi|38569493 potassium voltage-gated channel, subfamily H
(eag-related), member 3 [Homo sapiens]
Length = 1083
Score = 38.1 bits (87), Expect = 0.024
Identities = 35/131 (26%), Positives = 45/131 (34%), Gaps = 14/131 (10%)
Query: 382 SGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEEAPPPVFPLRPGGLPG 441
SGEGP A + GL Q + + + A S TW PPP+ P G P
Sbjct: 922 SGEGPCPASTSGLLQPLCVDTGASSYCLQPPAGSVLSGTWPHPRPGPPPLMAPWPWGPPA 981
Query: 442 L--CEWLRRAL---------PPAQAGALLLALPPASPSAARTKAAALRAGAWRPALLASL 490
W R PPA L P++P++ R G P A
Sbjct: 982 SQSSPWPRATAFWTSTSDSEPPASGD---LCSEPSTPASPPPSEEGARTGPAEPVSQAEA 1038
Query: 491 AAAAAPLPGLG 501
+ P PG G
Sbjct: 1039 TSTGEPPPGSG 1049
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 37.7 bits (86), Expect = 0.032
Identities = 71/257 (27%), Positives = 90/257 (35%), Gaps = 35/257 (13%)
Query: 250 PGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGT-ATTAAAASHPTHYDALILVTPGAP 308
P A A+ AP A R TVP G A AA PT + L ++ P
Sbjct: 401 PRAPKAAAKAAPAKRTARRRXXXXD-TVPAAPEGAGAARPAAPLRPTSFSVLDILDPNKF 459
Query: 309 TEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKN---AGGGGLENA 365
+ V LL P AP C P G+ P+ E L+ AG GG+
Sbjct: 460 NSRRRRCV--LLGPVAPAACAPCASAPCAPAPAASGRP--PRAEELERRALAGAGGVG-- 513
Query: 366 LSKGREKCSAGSQKAGSGEGPGKAGSEGLQQVVGMKKSGGGDSERAAALS--PEDETWEV 423
+AG++ +G+ P KAG G GGG S A + P+DE +
Sbjct: 514 --------AAGAEPPNAGD-PFKAGEAETNDTNGYSSGGGGHSPSADSGDEVPDDEDDDE 564
Query: 424 LE----EAPPPVFPLRPGGLPGLCEWLRRALPPAQAGALLLALPPASPSAARTKAAALRA 479
E EA R GG L +G A ASP A +AAA
Sbjct: 565 DEAPETEAARGAEEARGGG---------GGLGARGSGCQGAAETDASPGATVDEAAAPGP 615
Query: 480 GAWRPALLASLAAAAAP 496
P AAAP
Sbjct: 616 RENSPVAPGPPGGAAAP 632
Score = 35.0 bits (79), Expect = 0.21
Identities = 31/101 (30%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 29 DKDVETLEAPEGRPDSGVPSLRAAGPGLFLGELSCPPAAPGPWAAEANVLVLVLPGPEGN 88
D+D + EAPE G R G GL C AA + A V PGP N
Sbjct: 559 DEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAPGPREN 618
Query: 89 GEPLAPA-LGEAALAALARGTPLLAVRNLRPGDSQTAAQAR 128
P+AP G AA A TP +P +T + ++
Sbjct: 619 -SPVAPGPPGGAAAPGGAGTTPQGTATAAKPKRKRTGSDSK 658
Score = 29.6 bits (65), Expect = 8.7
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 523 EPTALARRERALGLASGELAARAHFPGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWP 582
E A E A G G L AR G AE +A GA E A G + P
Sbjct: 569 ETEAARGAEEARG-GGGGLGARGS--GCQGAAETDASPGATVDEAAAPGPRENSPVAPGP 625
Query: 583 AGGAAATGGLG 593
GGAAA GG G
Sbjct: 626 PGGAAAPGGAG 636
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 37.4 bits (85), Expect = 0.042
Identities = 53/204 (25%), Positives = 62/204 (30%), Gaps = 40/204 (19%)
Query: 247 PGDPGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPG 306
PG PG P P FP P+ P P G G PG
Sbjct: 924 PGPPGERGPQGPQGPVGFPGPKGP-----PGPPGKDG--------------------LPG 958
Query: 307 APTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGGGLENAL 366
P ++ Q P P V G + +GE P G G GL A
Sbjct: 959 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGP----PGEQGLPGAA 1014
Query: 367 SKGREKCSAGSQKAGSGEG-------PGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDE 419
K K G Q +G PG+ G G Q G+K G SP +
Sbjct: 1015 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGER 1074
Query: 420 TWEVLEEAPPPVFPLRPG--GLPG 441
A P P RPG G PG
Sbjct: 1075 --GSAGTAGPIGLPGRPGPQGPPG 1096
Score = 30.0 bits (66), Expect = 6.6
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGS 391
DG+ P G P G K G A ++GR+ +AG+ PGK G
Sbjct: 1350 DGDPGQPGPPGPSGEAGPPGPPGKRGPPGA---AGAEGRQGEKGAKGEAGAEGPPGKTGP 1406
Query: 392 EGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEEAPPPVFPLRPGGLPGL 442
G Q G K G + + ++ PP P+ P GLPGL
Sbjct: 1407 VGPQGPAG-KPGPEGLRGIPGPVGEQGLPGAAGQDGPPG--PMGPPGLPGL 1454
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 37.4 bits (85), Expect = 0.042
Identities = 53/204 (25%), Positives = 62/204 (30%), Gaps = 40/204 (19%)
Query: 247 PGDPGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPG 306
PG PG P P FP P+ P P G G PG
Sbjct: 873 PGPPGERGPQGPQGPVGFPGPKGP-----PGPPGKDG--------------------LPG 907
Query: 307 APTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGGGLENAL 366
P ++ Q P P V G + +GE P G G GL A
Sbjct: 908 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGP----PGEQGLPGAA 963
Query: 367 SKGREKCSAGSQKAGSGEG-------PGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDE 419
K K G Q +G PG+ G G Q G+K G SP +
Sbjct: 964 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGER 1023
Query: 420 TWEVLEEAPPPVFPLRPG--GLPG 441
A P P RPG G PG
Sbjct: 1024 --GSAGTAGPIGLPGRPGPQGPPG 1045
Score = 30.0 bits (66), Expect = 6.6
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGS 391
DG+ P G P G K G A ++GR+ +AG+ PGK G
Sbjct: 1299 DGDPGQPGPPGPSGEAGPPGPPGKRGPPGA---AGAEGRQGEKGAKGEAGAEGPPGKTGP 1355
Query: 392 EGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEEAPPPVFPLRPGGLPGL 442
G Q G K G + + ++ PP P+ P GLPGL
Sbjct: 1356 VGPQGPAG-KPGPEGLRGIPGPVGEQGLPGAAGQDGPPG--PMGPPGLPGL 1403
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 37.4 bits (85), Expect = 0.042
Identities = 53/204 (25%), Positives = 62/204 (30%), Gaps = 40/204 (19%)
Query: 247 PGDPGAAPASVPTAPTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDALILVTPG 306
PG PG P P FP P+ P P G G PG
Sbjct: 912 PGPPGERGPQGPQGPVGFPGPKGP-----PGPPGKDG--------------------LPG 946
Query: 307 APTEKDWAQVQALLLPDAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAGGGGLENAL 366
P ++ Q P P V G + +GE P G G GL A
Sbjct: 947 HPGQRGETGFQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGP----PGEQGLPGAA 1002
Query: 367 SKGREKCSAGSQKAGSGEG-------PGKAGSEGLQQVVGMKKSGGGDSERAAALSPEDE 419
K K G Q +G PG+ G G Q G+K G SP +
Sbjct: 1003 GKEGAKGDPGPQGISGKDGPAGLRGFPGERGLPGAQGAPGLKGGEGPQGPPGPVGSPGER 1062
Query: 420 TWEVLEEAPPPVFPLRPG--GLPG 441
A P P RPG G PG
Sbjct: 1063 --GSAGTAGPIGLPGRPGPQGPPG 1084
Score = 30.0 bits (66), Expect = 6.6
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 332 DGEGEDPECLGEGKMENPKGESLKNAGGGGLENALSKGREKCSAGSQKAGSGEGPGKAGS 391
DG+ P G P G K G A ++GR+ +AG+ PGK G
Sbjct: 1338 DGDPGQPGPPGPSGEAGPPGPPGKRGPPGA---AGAEGRQGEKGAKGEAGAEGPPGKTGP 1394
Query: 392 EGLQQVVGMKKSGGGDSERAAALSPEDETWEVLEEAPPPVFPLRPGGLPGL 442
G Q G K G + + ++ PP P+ P GLPGL
Sbjct: 1395 VGPQGPAG-KPGPEGLRGIPGPVGEQGLPGAAGQDGPPG--PMGPPGLPGL 1442
>gi|116292174 fidgetin-like 2 [Homo sapiens]
Length = 653
Score = 37.4 bits (85), Expect = 0.042
Identities = 79/300 (26%), Positives = 99/300 (33%), Gaps = 63/300 (21%)
Query: 244 GLDPGDPGAAPASVPT----APTPFPAPERPNVVLWTVPLGHTGTATTAAAASHPTHYDA 299
G P PG PA T APTP PAP P G T A A
Sbjct: 217 GALPPPPGPPPAPYLTPGLPAPTPLPAPAPPTAY---------GFPTAAPGAE-----SG 262
Query: 300 LILVTPGAPTEKDWAQVQALLLP-DAPLVCVRTDGEGEDPECLGEGKMENPKGESLKNAG 358
L L A + + P AP+ + ++ EC G G P G + + +G
Sbjct: 263 LSLKRKAADEGPEGRYRKYAYEPAKAPVADGASYPAADNGECRGNGFRAKPPGAAEEASG 322
Query: 359 --GGGLE-------------NALSKGREKCSA--GSQKAGSGEGPGKAGSEGLQQVVGMK 401
GGG+ K E+ A G SGE P L+ V
Sbjct: 323 KYGGGVPLKVLGSPVYGPQLEPFEKFPERAPAPRGGFAVPSGETPKGVDPGALELVTSKM 382
Query: 402 KSGG---------GDSERAAALSPEDETWEVLEEAPPPVFP--LRPG------GLPGLCE 444
G G AAL E+ W +L PP +P LRP G G +
Sbjct: 383 VDCGPPVQWADVAGQGALKAALE-EELVWPLLR---PPAYPGSLRPPRTVLLFGPRGAGK 438
Query: 445 WLRRALPPAQAGALLLAL------PPASPSAARTKAAALRAGAWRPALLASLAAAAAPLP 498
L Q GA LL L P + AR AA A RP + ++ A LP
Sbjct: 439 ALLGRCLATQLGATLLRLRGATLAAPGAAEGARLLQAAFAAARCRPPSVLLISELEALLP 498
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 37.4 bits (85), Expect = 0.042
Identities = 63/240 (26%), Positives = 85/240 (35%), Gaps = 37/240 (15%)
Query: 379 KAGSGEGPGKAGSEGLQQVVGMKKSGG--GDSERAAALSPEDETWEVLEEAPPPVF---- 432
+ GS G+A S+ + V K G S A + +W+ E+ P PV+
Sbjct: 394 RPGSETDAGRAVSQAQESVQSKVKGPGKMSHSSSGPASVSQLSSWKTPEQ-PDPVWVQSS 452
Query: 433 --------PLRPGGLPGLCEWLR--RALPPAQAGALLLALPPASPSAARTKAAALRAGAW 482
P LP + + PP QAG+ P P +A AAA+ A A
Sbjct: 453 VSGKGEKHPPPRTQLPSSSGKISSGNSFPPQQAGS-----PLKRPFSA---AAAIAAAAA 504
Query: 483 RPALLASLAAAAAPLPGLGWACDVALLRGQLAEWRRGLGLEPTALARRERALGLASGELA 542
A A+ AAAAAP P L A AL P A A A+ A
Sbjct: 505 AAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAPAVAAAPAAAASA 564
Query: 543 ARAHF------------PGPVTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAATG 590
A +H P P + + A A + G L A++ P GA A G
Sbjct: 565 APSHSQKPSVPLIQASRPCPAAQPPTKFIKIAPAIQLRTGSTGLKAINVEGPVQGAQALG 624
>gi|61966919 hypothetical protein LOC442444 [Homo sapiens]
Length = 1035
Score = 37.4 bits (85), Expect = 0.042
Identities = 39/126 (30%), Positives = 52/126 (41%), Gaps = 7/126 (5%)
Query: 3 PPQGDVTALFLGPPGLGKSALIAALCDKDVETLEAPEGRPDSGVPSLRAAGPGLFLGELS 62
PP+ V++L L PP G S L +KDV L PE PD+GV L P + L
Sbjct: 454 PPKTRVSSLHLEPPETGVSHLCPEPPEKDVSHLR-PE-PPDTGVSHLCPEPPKTRVSHLR 511
Query: 63 CPPAAPG-----PWAAEANVLVLVLPGPEGNGEPLAPALGEAALAALARGTPLLAVRNLR 117
P+ G P + V L PE + L P E ++ L P + +LR
Sbjct: 512 PEPSETGVSHLRPEPPKILVSSLHQAPPESSVSHLRPEPPETGVSHLRPEPPKTRMYSLR 571
Query: 118 PGDSQT 123
P T
Sbjct: 572 PEPPDT 577
Score = 37.0 bits (84), Expect = 0.054
Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 23/137 (16%)
Query: 1 MPPPQGDVTALFLGPPGLGKSALIAALCDKDVETLEAPEGR--PDSGVPSLRAAGPGLFL 58
+ PP+ V+ L+L PPG G ++ LC + +T + R P++GVP L P +
Sbjct: 260 LEPPETGVSHLYLEPPGTG----VSHLCPEPPKTRVSHLHREPPETGVPDLCLEPPKSRV 315
Query: 59 GELSCPPAAPG-----------------PWAAEANVLVLVLPGPEGNGEPLAPALGEAAL 101
L P+ G P E V L PE PL EA +
Sbjct: 316 SHLRPEPSETGVSHLHPEPPKTLVSSLHPEPPETGVSHLCPEPPETRVSPLRQLPPEAGV 375
Query: 102 AALARGTPLLAVRNLRP 118
+ L P V LRP
Sbjct: 376 SHLCPEPPKTRVPPLRP 392
Score = 31.6 bits (70), Expect = 2.3
Identities = 35/127 (27%), Positives = 48/127 (37%), Gaps = 9/127 (7%)
Query: 3 PPQGDVTALFLGPPGLGKSALIAALCDKDVETLEAPEGRPDSGVPSLRAAGPGLFLGELS 62
PP+ V++L L PP G S L V +L P++GV L PG + L
Sbjct: 226 PPKTQVSSLHLEPPETGVSHLRPEPPKTQVSSLHLEP--PETGVSHLYLEPPGTGVSHL- 282
Query: 63 CPPAAPGPWA------AEANVLVLVLPGPEGNGEPLAPALGEAALAALARGTPLLAVRNL 116
CP + E V L L P+ L P E ++ L P V +L
Sbjct: 283 CPEPPKTRVSHLHREPPETGVPDLCLEPPKSRVSHLRPEPSETGVSHLHPEPPKTLVSSL 342
Query: 117 RPGDSQT 123
P +T
Sbjct: 343 HPEPPET 349
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,113,547
Number of Sequences: 37866
Number of extensions: 1776426
Number of successful extensions: 8813
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 350
Number of HSP's that attempted gapping in prelim test: 8024
Number of HSP's gapped (non-prelim): 1182
length of query: 623
length of database: 18,247,518
effective HSP length: 108
effective length of query: 515
effective length of database: 14,157,990
effective search space: 7291364850
effective search space used: 7291364850
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.