Search of human proteins with 54859685

Search of human proteins with 54859685

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
         (223 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   447   e-126
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa...   353   5e-98
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          303   1e-82
gi|16933567 mel transforming oncogene [Homo sapiens]                  200   7e-52
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           196   1e-50
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      191   6e-49
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   185   2e-47
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            185   2e-47
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            185   2e-47
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           184   7e-47
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          182   2e-46
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   180   8e-46
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           176   1e-44
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    174   4e-44
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         162   2e-40
gi|19923483 GTPase Rab14 [Homo sapiens]                               160   8e-40
gi|50234889 RAB43 protein [Homo sapiens]                              160   8e-40
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          159   2e-39
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           158   3e-39
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          157   7e-39
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]           157   9e-39
gi|34485711 Ras-related protein Rab-27A [Homo sapiens]                156   1e-38
gi|34485709 Ras-related protein Rab-27A [Homo sapiens]                156   1e-38
gi|34485706 Ras-related protein Rab-27A [Homo sapiens]                156   1e-38
gi|19923264 Ras-related protein Rab-27A [Homo sapiens]                156   1e-38
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]          155   2e-38
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]           155   3e-38
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         152   2e-37
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]         150   8e-37
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          150   1e-36

>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  447 bits (1150), Expect = e-126
 Identities = 223/223 (100%), Positives = 223/223 (100%)

Query: 1   MTGTPGAVATRDGEAPERSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI 60
           MTGTPGAVATRDGEAPERSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI
Sbjct: 1   MTGTPGAVATRDGEAPERSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFI 60

Query: 61  ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN 120
           ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN
Sbjct: 61  ATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDN 120

Query: 121 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV 180
           IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV
Sbjct: 121 IRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNV 180

Query: 181 ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM 223
           ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM
Sbjct: 181 ELAFLAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCCSFM 223


>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
           sapiens]
          Length = 216

 Score =  353 bits (907), Expect = 5e-98
 Identities = 177/193 (91%), Positives = 183/193 (94%)

Query: 31  KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
           K +L+GD+GVGKT  L+QF  G F+ G+F ATVGI F NKVVTVDGVRVKLQIWDTAGQE
Sbjct: 24  KTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAGQE 83

Query: 91  RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 150
           RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE
Sbjct: 84  RFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSE 143

Query: 151 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYV 210
           RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYV
Sbjct: 144 RVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADEPSFQIRDYV 203

Query: 211 ESQKKRSSCCSFM 223
           ESQKKRSSCCSFM
Sbjct: 204 ESQKKRSSCCSFM 216


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  303 bits (775), Expect = 1e-82
 Identities = 148/216 (68%), Positives = 178/216 (82%), Gaps = 9/216 (4%)

Query: 14  EAPERSP--PCSPS-------YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVG 64
           +AP   P  P  PS       YD+  KVML+GD+GVGKTC L++FKDGAFL+GTFI+TVG
Sbjct: 39  DAPPNGPLQPGRPSLGGGVDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVG 98

Query: 65  IDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAW 124
           IDFRNKV+ VDGV+VKLQ+WDTAGQERFRSVTHAYYRDA ALLLLYD+TNK+SFDNI+AW
Sbjct: 99  IDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAW 158

Query: 125 LTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 184
           LTEIHEYAQ DV +MLLGNK D + ERV++ EDGE LA+EYG+PF+ETSAKTG+NV+LAF
Sbjct: 159 LTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAF 218

Query: 185 LAIAKELKYRAGHQADEPSFQIRDYVESQKKRSSCC 220
            AIAKELK R+     EP F++ DYV+ + + +SCC
Sbjct: 219 TAIAKELKQRSMKAPSEPRFRLHDYVKREGRGASCC 254


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  200 bits (509), Expect = 7e-52
 Identities = 100/198 (50%), Positives = 140/198 (70%), Gaps = 5/198 (2%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           +YD   K++L+GD+GVGKTC L +F + AF S TFI+T+GIDF+ + + +DG R+KLQIW
Sbjct: 4   TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNS-TFISTIGIDFKIRTIELDGKRIKLQIW 62

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQERFR++T AYYR A  ++L+YDITN+ SFDNIR W+  I E+A  DV  M+LGNK
Sbjct: 63  DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQAD---- 200
            D++ +R +  E GE LA +YG+ F+ETSAK  +NVE AF  +A+++K +   + +    
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182

Query: 201 EPSFQIRDYVESQKKRSS 218
           + S Q       Q+KRSS
Sbjct: 183 QGSNQGVKITPDQQKRSS 200


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  196 bits (498), Expect = 1e-50
 Identities = 91/177 (51%), Positives = 131/177 (74%), Gaps = 1/177 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           +YD   K++L+GD+GVGKTC L +F + AF + TFI+T+GIDF+ + + +DG ++KLQIW
Sbjct: 4   TYDYLFKLLLIGDSGVGKTCLLFRFSEDAF-NTTFISTIGIDFKIRTIELDGKKIKLQIW 62

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQERFR++T AYYR A  ++L+YDITN+ SFDNI+ W+  I E+A  DV  M+LGNK
Sbjct: 63  DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQADE 201
            DM+ +R +  E GE LA +YG+ FLETSAK+  NVE AF  +A+++  +   + ++
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMND 179


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  191 bits (484), Expect = 6e-49
 Identities = 91/167 (54%), Positives = 123/167 (73%), Gaps = 1/167 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           +YDL  K++L+GD+GVGKTC L +F D AF + TFI+T+GIDF+ K V + G ++KLQIW
Sbjct: 5   TYDLLFKLLLIGDSGVGKTCVLFRFSDDAF-NTTFISTIGIDFKIKTVELQGKKIKLQIW 63

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQERF ++T +YYR A  ++L+YDITN  SF+NI  WL  I E+A  DV  MLLGNK
Sbjct: 64  DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
            DM  +RV+    G  +ARE+G+ F ETSAK  +N+E AFL +A+++
Sbjct: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDI 170


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  185 bits (470), Expect = 2e-47
 Identities = 87/184 (47%), Positives = 134/184 (72%), Gaps = 4/184 (2%)

Query: 16  PERSPPCSP---SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV 72
           P  +PP S    +YD   K++L+GD+GVGKTC +I+F +  F + T+I+T+GIDF+ + V
Sbjct: 116 PSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTV 174

Query: 73  TVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYA 132
            ++G ++KLQ+WDTAGQERF+++T AYYR A  ++L YDIT++ SF+NI+ W+  I E A
Sbjct: 175 DIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENA 234

Query: 133 QRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELK 192
              V  +LLGNK DM ++R ++ E  + LARE+G+ F ETSAK+ MNV+ AF ++A+++ 
Sbjct: 235 SAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294

Query: 193 YRAG 196
            ++G
Sbjct: 295 LKSG 298


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  185 bits (470), Expect = 2e-47
 Identities = 87/184 (47%), Positives = 134/184 (72%), Gaps = 4/184 (2%)

Query: 16  PERSPPCSP---SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV 72
           P  +PP S    +YD   K++L+GD+GVGKTC +I+F +  F + T+I+T+GIDF+ + V
Sbjct: 116 PSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTV 174

Query: 73  TVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYA 132
            ++G ++KLQ+WDTAGQERF+++T AYYR A  ++L YDIT++ SF+NI+ W+  I E A
Sbjct: 175 DIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENA 234

Query: 133 QRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELK 192
              V  +LLGNK DM ++R ++ E  + LARE+G+ F ETSAK+ MNV+ AF ++A+++ 
Sbjct: 235 SAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294

Query: 193 YRAG 196
            ++G
Sbjct: 295 LKSG 298


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  185 bits (470), Expect = 2e-47
 Identities = 87/184 (47%), Positives = 134/184 (72%), Gaps = 4/184 (2%)

Query: 16  PERSPPCSP---SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV 72
           P  +PP S    +YD   K++L+GD+GVGKTC +I+F +  F + T+I+T+GIDF+ + V
Sbjct: 116 PSPAPPVSAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTV 174

Query: 73  TVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYA 132
            ++G ++KLQ+WDTAGQERF+++T AYYR A  ++L YDIT++ SF+NI+ W+  I E A
Sbjct: 175 DIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENA 234

Query: 133 QRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELK 192
              V  +LLGNK DM ++R ++ E  + LARE+G+ F ETSAK+ MNV+ AF ++A+++ 
Sbjct: 235 SAGVEHLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294

Query: 193 YRAG 196
            ++G
Sbjct: 295 LKSG 298


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  184 bits (466), Expect = 7e-47
 Identities = 91/202 (45%), Positives = 140/202 (69%), Gaps = 9/202 (4%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           +YD   K++L+GD+GVGKTC +I+F +  F + T+I+T+GIDF+ + V ++G ++KLQ+W
Sbjct: 4   AYDHLFKLLLIGDSGVGKTCLIIRFAEDNF-NNTYISTIGIDFKIRTVDIEGKKIKLQVW 62

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQERF+++T AYYR A  ++L+YDIT++ SF+NI+ W+  I E A   V  +LLGNK
Sbjct: 63  DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKY-----RAGHQA 199
            DM ++R ++ E  + LARE+G+ F ETSAK+ MNV+ AF ++A+++       R+G+  
Sbjct: 123 CDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGN 182

Query: 200 DEPSFQIRDYVESQKKRSSCCS 221
             PS    D     KK ++ CS
Sbjct: 183 KPPS---TDLKTCDKKNTNKCS 201


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  182 bits (462), Expect = 2e-46
 Identities = 85/202 (42%), Positives = 137/202 (67%), Gaps = 6/202 (2%)

Query: 23  SPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQ 82
           +P YD   K++L+GD+GVGK+C L++F D  +   ++I+T+G+DF+ + + +DG  +KLQ
Sbjct: 2   NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTE-SYISTIGVDFKIRTIELDGKTIKLQ 60

Query: 83  IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 142
           IWDTAGQERFR++T +YYR A  ++++YD+T++ S+ N++ WL EI  YA  +V  +L+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120

Query: 143 NKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQA--- 199
           NK+D+++++V+ +   +  A   G+PFLETSAK   NVE AF+ +A E+K R G  A   
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG 180

Query: 200 -DEPSFQIRDYVESQKKRSSCC 220
            + P+ +I D    +     CC
Sbjct: 181 GERPNLKI-DSTPVKPAGGGCC 201


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  180 bits (457), Expect = 8e-46
 Identities = 79/174 (45%), Positives = 126/174 (72%), Gaps = 1/174 (0%)

Query: 23  SPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQ 82
           +P YD   K++L+GD+GVGK+C L++F D  +   ++I+T+G+DF+ + + +DG  +KLQ
Sbjct: 5   NPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTE-SYISTIGVDFKIRTIELDGKTIKLQ 63

Query: 83  IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 142
           IWDTAGQERFR++T +YYR A  ++++YD+T++ SF+N++ WL EI  YA  +V  +L+G
Sbjct: 64  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123

Query: 143 NKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAG 196
           NK D+++++V+     +  A   G+PFLETSAK   NVE +F+ +A E+K R G
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMG 177


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  176 bits (447), Expect = 1e-44
 Identities = 81/167 (48%), Positives = 121/167 (72%), Gaps = 1/167 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           +Y    K +++GDTGVGK+C L+QF D  F       T+G++F  +++T+DG ++KLQIW
Sbjct: 2   AYAYLFKYIIIGDTGVGKSCLLLQFTDKRF-QPVHDLTIGVEFGARMITIDGKQIKLQIW 60

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQE FRS+T +YYR A   LL+YDIT + +F+++  WL +  +++  ++VIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
           +D+ S R ++ E+GE  ARE+G+ F+ETSAKT  NVE AF+  AKE+
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  174 bits (442), Expect = 4e-44
 Identities = 81/167 (48%), Positives = 121/167 (72%), Gaps = 1/167 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           +Y    K +++GDTGVGK+C L+QF D  F       T+G++F  ++V +DG ++KLQIW
Sbjct: 2   TYAYLFKYIIIGDTGVGKSCLLLQFTDKRF-QPVHDLTIGVEFGARMVNIDGKQIKLQIW 60

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQE FRS+T +YYR A   LL+YDIT + +F+++ +WL +  +++  ++VIML+GNK
Sbjct: 61  DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
           +D+ S R ++ E+GE  ARE+G+ F+ETSAKT  NVE AF+  AKE+
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  162 bits (411), Expect = 2e-40
 Identities = 79/168 (47%), Positives = 117/168 (69%), Gaps = 2/168 (1%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           ++D   K++L+GD+ VGKTC +  FK G +   T   T+G+DF  + + +DG +VK+Q+W
Sbjct: 13  NFDYLFKIILIGDSNVGKTCVVQHFKSGVYTE-TQQNTIGVDFTVRSLDIDGKKVKMQVW 71

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQERFR++T +YYR A A ++ YD+T +S+F++I  W+ EI +Y   +VVIML+GNK
Sbjct: 72  DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131

Query: 145 ADMSSERVIRSEDGETLAREYG-VPFLETSAKTGMNVELAFLAIAKEL 191
            D+  +R +  ED  TLA +YG +  LETSAK   N+E  F+ +AKEL
Sbjct: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKEL 179


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  160 bits (405), Expect = 8e-40
 Identities = 76/167 (45%), Positives = 116/167 (69%), Gaps = 1/167 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           +Y    K +++GD GVGK+C L QF +  F++     T+G++F  +++ V G ++KLQIW
Sbjct: 7   NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADC-PHTIGVEFGTRIIEVSGQKIKLQIW 65

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQERFR+VT +YYR A   L++YDIT +S+++++ +WLT+       + VI+L+GNK
Sbjct: 66  DTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNK 125

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
           AD+ ++R +  E+ +  A E G+ FLE SAKTG NVE AFL  AK++
Sbjct: 126 ADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKI 172


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  160 bits (405), Expect = 8e-40
 Identities = 85/185 (45%), Positives = 119/185 (64%), Gaps = 3/185 (1%)

Query: 13  GEAPERSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV 72
           G  P    P    YD   K++L+GD  VGKTC + +FK GAF S    +T+G+DF  K +
Sbjct: 3   GPGPGPGDP-DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAF-SERQGSTIGVDFTMKTL 60

Query: 73  TVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYA 132
            + G RVKLQIWDTAGQERFR++T +YYR A   +L YDIT +SSF ++  W+ ++ +YA
Sbjct: 61  EIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYA 120

Query: 133 QRDVVIMLLGNKADMSSERVIRSEDGETLAREYGV-PFLETSAKTGMNVELAFLAIAKEL 191
             ++V +L+GNK+D+S  R +   + ++LA  Y +   +ETSAK   NVE AFL +A EL
Sbjct: 121 GSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180

Query: 192 KYRAG 196
             R G
Sbjct: 181 IMRHG 185


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  159 bits (402), Expect = 2e-39
 Identities = 76/160 (47%), Positives = 112/160 (70%), Gaps = 1/160 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           ++D   K++++G++ VGKT FL ++ D +F S  F++TVGIDF+ K V  +  R+KLQIW
Sbjct: 26  NFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSA-FVSTVGIDFKVKTVFKNEKRIKLQIW 84

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQER+R++T AYYR A   +L+YDITN+ SF+ ++ W T+I  Y+  +  ++L+GNK
Sbjct: 85  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNK 144

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 184
            DM  ERVI +E G+ L  + G  F ETSAK  +NV+  F
Sbjct: 145 CDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTF 184


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  158 bits (400), Expect = 3e-39
 Identities = 81/199 (40%), Positives = 127/199 (63%), Gaps = 6/199 (3%)

Query: 26  YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWD 85
           YD   K++++GD+GVGK+  L++F D  F SG++I T+G+DF+ + V ++G +VKLQIWD
Sbjct: 5   YDHLFKLLIIGDSGVGKSSLLLRFADNTF-SGSYITTIGVDFKIRTVEINGEKVKLQIWD 63

Query: 86  TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 145
           TAGQERFR++T  YYR    ++++YD+T+  SF N++ WL EI++    DV  +L+GNK 
Sbjct: 64  TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVGNKN 122

Query: 146 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAK-ELKYRAGHQADEPSF 204
           D    +V+ +ED    A + G+   ETSAK  +NVE  F  I +  L+ +  + A +   
Sbjct: 123 DDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQQQQ 182

Query: 205 QIRDYV---ESQKKRSSCC 220
           Q  D V   ++ K++  CC
Sbjct: 183 QQNDVVKLTKNSKRKKRCC 201


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  157 bits (397), Expect = 7e-39
 Identities = 80/166 (48%), Positives = 108/166 (65%), Gaps = 1/166 (0%)

Query: 26  YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWD 85
           YD   K++L+G+ GVGKTC + +F  G F  G   AT+G+DF  K V ++G +VKLQIWD
Sbjct: 6   YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQG-ATIGVDFMIKTVEINGEKVKLQIWD 64

Query: 86  TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKA 145
           TAGQERFRS+T +YYR A AL+L YDIT + SF  +  WL EI +YA   V+ +L+GNK 
Sbjct: 65  TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKI 124

Query: 146 DMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
           D++  R +  +  E  +    + +LETSAK   NVE  FL +A  L
Sbjct: 125 DLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 170


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score =  157 bits (396), Expect = 9e-39
 Identities = 74/160 (46%), Positives = 110/160 (68%), Gaps = 1/160 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           ++D   K++++G++ VGKT FL ++ D +F +  F++TVGIDF+ K +  +  R+KLQIW
Sbjct: 18  NFDYMFKILIIGNSSVGKTSFLFRYADDSF-TPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQER+R++T AYYR A   +L+YDITN+ SF+ ++ W T+I  Y+  +  ++L+GNK
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 184
            DM  ERV+ SE G  LA   G  F E SAK  +NV+  F
Sbjct: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTF 176


>gi|34485711 Ras-related protein Rab-27A [Homo sapiens]
          Length = 221

 Score =  156 bits (395), Expect = 1e-38
 Identities = 89/216 (41%), Positives = 127/216 (58%), Gaps = 24/216 (11%)

Query: 26  YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV----------TVD 75
           YD   K + LGD+GVGKT  L Q+ DG F S  FI TVGIDFR K V          T  
Sbjct: 6   YDYLIKFLALGDSGVGKTSVLYQYTDGKFNS-KFITTVGIDFREKRVVYRASGPDGATGR 64

Query: 76  GVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEI--HEYAQ 133
           G R+ LQ+WDTAGQERFRS+T A++RDA   LLL+D+TN+ SF N+R W++++  H Y +
Sbjct: 65  GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCE 124

Query: 134 RDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKY 193
              ++ L GNK+D+  +RV++ E+   LA +YG+P+ ETSA  G N+  A   +   +  
Sbjct: 125 NPDIV-LCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMK 183

Query: 194 RAGHQADE---PSFQIR-------DYVESQKKRSSC 219
           R     D+   P   +R       D +  +K++ +C
Sbjct: 184 RMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219


>gi|34485709 Ras-related protein Rab-27A [Homo sapiens]
          Length = 221

 Score =  156 bits (395), Expect = 1e-38
 Identities = 89/216 (41%), Positives = 127/216 (58%), Gaps = 24/216 (11%)

Query: 26  YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV----------TVD 75
           YD   K + LGD+GVGKT  L Q+ DG F S  FI TVGIDFR K V          T  
Sbjct: 6   YDYLIKFLALGDSGVGKTSVLYQYTDGKFNS-KFITTVGIDFREKRVVYRASGPDGATGR 64

Query: 76  GVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEI--HEYAQ 133
           G R+ LQ+WDTAGQERFRS+T A++RDA   LLL+D+TN+ SF N+R W++++  H Y +
Sbjct: 65  GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCE 124

Query: 134 RDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKY 193
              ++ L GNK+D+  +RV++ E+   LA +YG+P+ ETSA  G N+  A   +   +  
Sbjct: 125 NPDIV-LCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMK 183

Query: 194 RAGHQADE---PSFQIR-------DYVESQKKRSSC 219
           R     D+   P   +R       D +  +K++ +C
Sbjct: 184 RMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219


>gi|34485706 Ras-related protein Rab-27A [Homo sapiens]
          Length = 221

 Score =  156 bits (395), Expect = 1e-38
 Identities = 89/216 (41%), Positives = 127/216 (58%), Gaps = 24/216 (11%)

Query: 26  YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV----------TVD 75
           YD   K + LGD+GVGKT  L Q+ DG F S  FI TVGIDFR K V          T  
Sbjct: 6   YDYLIKFLALGDSGVGKTSVLYQYTDGKFNS-KFITTVGIDFREKRVVYRASGPDGATGR 64

Query: 76  GVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEI--HEYAQ 133
           G R+ LQ+WDTAGQERFRS+T A++RDA   LLL+D+TN+ SF N+R W++++  H Y +
Sbjct: 65  GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCE 124

Query: 134 RDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKY 193
              ++ L GNK+D+  +RV++ E+   LA +YG+P+ ETSA  G N+  A   +   +  
Sbjct: 125 NPDIV-LCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMK 183

Query: 194 RAGHQADE---PSFQIR-------DYVESQKKRSSC 219
           R     D+   P   +R       D +  +K++ +C
Sbjct: 184 RMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219


>gi|19923264 Ras-related protein Rab-27A [Homo sapiens]
          Length = 221

 Score =  156 bits (395), Expect = 1e-38
 Identities = 89/216 (41%), Positives = 127/216 (58%), Gaps = 24/216 (11%)

Query: 26  YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVV----------TVD 75
           YD   K + LGD+GVGKT  L Q+ DG F S  FI TVGIDFR K V          T  
Sbjct: 6   YDYLIKFLALGDSGVGKTSVLYQYTDGKFNS-KFITTVGIDFREKRVVYRASGPDGATGR 64

Query: 76  GVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEI--HEYAQ 133
           G R+ LQ+WDTAGQERFRS+T A++RDA   LLL+D+TN+ SF N+R W++++  H Y +
Sbjct: 65  GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCE 124

Query: 134 RDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKY 193
              ++ L GNK+D+  +RV++ E+   LA +YG+P+ ETSA  G N+  A   +   +  
Sbjct: 125 NPDIV-LCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMK 183

Query: 194 RAGHQADE---PSFQIR-------DYVESQKKRSSC 219
           R     D+   P   +R       D +  +K++ +C
Sbjct: 184 RMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  155 bits (393), Expect = 2e-38
 Identities = 75/160 (46%), Positives = 110/160 (68%), Gaps = 1/160 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           ++D   K++++G++ VGKT FL ++ D  F +  F++TVGIDF+ K V     RVKLQIW
Sbjct: 18  NFDYMFKLLIIGNSSVGKTSFLFRYADDTF-TPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQER+R++T AYYR A   +L+YDITN+ SF+ ++ W T+I  Y+  +  ++L+GNK
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNK 136

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 184
            DM  ERV+ +E G+ LA + G  F E SAK  ++V  AF
Sbjct: 137 CDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAF 176


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  155 bits (392), Expect = 3e-38
 Identities = 75/160 (46%), Positives = 109/160 (68%), Gaps = 1/160 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           ++D   K++L+G++ VGKT FL ++ D +F +  F++TVGIDF+ K V     R+KLQIW
Sbjct: 18  NFDYMFKLLLIGNSSVGKTSFLFRYADDSF-TPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQER+R++T AYYR A   LL+YDI N+ SF  ++ W T+I  Y+  +  ++L+GNK
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNK 136

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 184
            D+  ERV+ +EDG  LA + G  F E SAK  +NV+  F
Sbjct: 137 CDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVF 176


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  152 bits (384), Expect = 2e-37
 Identities = 77/167 (46%), Positives = 110/167 (65%), Gaps = 1/167 (0%)

Query: 25  SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
           +YD   K +++G  G GK+C L QF +  F   +   T+G++F ++VV V G  VKLQIW
Sbjct: 4   TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSN-HTIGVEFGSRVVNVGGKTVKLQIW 62

Query: 85  DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
           DTAGQERFRSVT +YYR A   LL+YDIT++ +++++ AWLT+    A  ++V++L GNK
Sbjct: 63  DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 122

Query: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
            D+  ER +   +    A+E  + FLETSA TG NVE AFL  A+ +
Sbjct: 123 KDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTI 169


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score =  150 bits (379), Expect = 8e-37
 Identities = 77/187 (41%), Positives = 116/187 (62%), Gaps = 3/187 (1%)

Query: 6   GAVATRDGEAPERSPPCSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGI 65
           G+ A   G+   R  P  P+ D   +V+++G  GVGKT  + +F D  F      +TVG+
Sbjct: 20  GSPALSGGQGRRRKQPPRPA-DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACK-STVGV 77

Query: 66  DFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWL 125
           DF+ K V + G +++LQIWDTAGQERF S+T AYYR A+ ++L+YDIT K +FD++  W+
Sbjct: 78  DFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWM 137

Query: 126 TEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREY-GVPFLETSAKTGMNVELAF 184
             I +YA  D  ++L+GNK D  ++R I  + GE  A++  G+ F E SAK   NV+  F
Sbjct: 138 KMIDKYASEDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 197

Query: 185 LAIAKEL 191
           L +  ++
Sbjct: 198 LKLVDDI 204


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  150 bits (378), Expect = 1e-36
 Identities = 75/169 (44%), Positives = 113/169 (66%), Gaps = 1/169 (0%)

Query: 23  SPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQ 82
           S +YD   K +++G+ G GK+C L QF +  F   +   T+G++F +K++ V G  VKLQ
Sbjct: 7   SETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSN-HTIGVEFGSKIINVGGKYVKLQ 65

Query: 83  IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLG 142
           IWDTAGQERFRSVT +YYR A   LL+YDIT++ +++ +  WLT+    A +++VI+L G
Sbjct: 66  IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCG 125

Query: 143 NKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKEL 191
           NK D+ ++R +   +    A+E  + FLETSA TG NVE AF+  A+++
Sbjct: 126 NKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKI 174


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,712,121
Number of Sequences: 37866
Number of extensions: 293136
Number of successful extensions: 1332
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 882
Number of HSP's gapped (non-prelim): 233
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.