BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50659093 mannosidase, alpha, class 2B, member 2 [Homo
sapiens]
(1009 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50659093 mannosidase, alpha, class 2B, member 2 [Homo sapiens] 2072 0.0
gi|51873064 mannosidase, alpha, class 2B, member 1 precursor [Ho... 310 6e-84
gi|51477714 mannosidase, alpha, class 2A, member 1 [Homo sapiens] 281 2e-75
gi|51477716 mannosidase, alpha, class 2A, member 2 [Homo sapiens] 270 5e-72
gi|46852164 mannosidase, alpha, class 2C, member 1 [Homo sapiens] 44 8e-04
gi|15529982 IMP4, U3 small nucleolar ribonucleoprotein, homolog ... 35 0.46
gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens] 32 2.3
gi|21361937 proline rich 7 (synaptic) [Homo sapiens] 32 3.9
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 31 5.1
gi|34328899 protein tyrosine phosphatase, non-receptor type 14 [... 31 5.1
gi|150456424 RW1 protein [Homo sapiens] 31 5.1
gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens] 31 6.7
gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens] 31 6.7
gi|98986457 host cell factor 1 [Homo sapiens] 31 6.7
>gi|50659093 mannosidase, alpha, class 2B, member 2 [Homo sapiens]
Length = 1009
Score = 2072 bits (5368), Expect = 0.0
Identities = 1009/1009 (100%), Positives = 1009/1009 (100%)
Query: 1 MGQLCWLPLLAPLLLLRPPGVQSAGPIRAFVVPHSHMDVGWVYTVQESMRAYAANVYTSV 60
MGQLCWLPLLAPLLLLRPPGVQSAGPIRAFVVPHSHMDVGWVYTVQESMRAYAANVYTSV
Sbjct: 1 MGQLCWLPLLAPLLLLRPPGVQSAGPIRAFVVPHSHMDVGWVYTVQESMRAYAANVYTSV 60
Query: 61 VEELARGQQRRFIAVEQEFFRLWWDGVASDQQKYQVRQLLEEGRLEFVIGGQVMHDEAVT 120
VEELARGQQRRFIAVEQEFFRLWWDGVASDQQKYQVRQLLEEGRLEFVIGGQVMHDEAVT
Sbjct: 61 VEELARGQQRRFIAVEQEFFRLWWDGVASDQQKYQVRQLLEEGRLEFVIGGQVMHDEAVT 120
Query: 121 HLDDQILQLTEGHGFLYETFGIRPQFSWHVDPFGASATTPTLFALAGFNAHLGSRIDYDL 180
HLDDQILQLTEGHGFLYETFGIRPQFSWHVDPFGASATTPTLFALAGFNAHLGSRIDYDL
Sbjct: 121 HLDDQILQLTEGHGFLYETFGIRPQFSWHVDPFGASATTPTLFALAGFNAHLGSRIDYDL 180
Query: 181 KAAMQEARGLQFVWRGSPSLSERQEIFTHIMDQYSYCTPSHIPFSNRSGFYWNGVAVFPK 240
KAAMQEARGLQFVWRGSPSLSERQEIFTHIMDQYSYCTPSHIPFSNRSGFYWNGVAVFPK
Sbjct: 181 KAAMQEARGLQFVWRGSPSLSERQEIFTHIMDQYSYCTPSHIPFSNRSGFYWNGVAVFPK 240
Query: 241 PPQDGVYPNMSEPVTPANINLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNASVQFA 300
PPQDGVYPNMSEPVTPANINLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNASVQFA
Sbjct: 241 PPQDGVYPNMSEPVTPANINLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNASVQFA 300
Query: 301 NMDPLLDHINSHAAELGVSVQYATLGDYFRALHALNVTWRVRDHHDFLPYSTEPFQAWTG 360
NMDPLLDHINSHAAELGVSVQYATLGDYFRALHALNVTWRVRDHHDFLPYSTEPFQAWTG
Sbjct: 301 NMDPLLDHINSHAAELGVSVQYATLGDYFRALHALNVTWRVRDHHDFLPYSTEPFQAWTG 360
Query: 361 FYTSRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLDPTWALQQLQQLRWAVSEVQHH 420
FYTSRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLDPTWALQQLQQLRWAVSEVQHH
Sbjct: 361 FYTSRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLDPTWALQQLQQLRWAVSEVQHH 420
Query: 421 DAITGTESPKVRDMYATHLASGMLGMRKLMASIVLDELQPQAPMAASSDAGPAGHFASVY 480
DAITGTESPKVRDMYATHLASGMLGMRKLMASIVLDELQPQAPMAASSDAGPAGHFASVY
Sbjct: 421 DAITGTESPKVRDMYATHLASGMLGMRKLMASIVLDELQPQAPMAASSDAGPAGHFASVY 480
Query: 481 NPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLLILTTIPGLSYRHY 540
NPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLLILTTIPGLSYRHY
Sbjct: 481 NPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLLILTTIPGLSYRHY 540
Query: 541 NIRPTAGAQEGTQEPAATVASTLQFGRRLRRRTSHAGRYLVPVANDCYIVLLDQDTNLMH 600
NIRPTAGAQEGTQEPAATVASTLQFGRRLRRRTSHAGRYLVPVANDCYIVLLDQDTNLMH
Sbjct: 541 NIRPTAGAQEGTQEPAATVASTLQFGRRLRRRTSHAGRYLVPVANDCYIVLLDQDTNLMH 600
Query: 601 SIWERQSNRTVRVTQEFLEYHVNGDVKQGPISDNYLFTPGKAAVPAWEAVEMEIVAGQLV 660
SIWERQSNRTVRVTQEFLEYHVNGDVKQGPISDNYLFTPGKAAVPAWEAVEMEIVAGQLV
Sbjct: 601 SIWERQSNRTVRVTQEFLEYHVNGDVKQGPISDNYLFTPGKAAVPAWEAVEMEIVAGQLV 660
Query: 661 TEIRQYFYRNMTAQNYTYAIRSRLTHVPQGHDGELLCHRIEQEYQAGPLELNREAVLRTS 720
TEIRQYFYRNMTAQNYTYAIRSRLTHVPQGHDGELLCHRIEQEYQAGPLELNREAVLRTS
Sbjct: 661 TEIRQYFYRNMTAQNYTYAIRSRLTHVPQGHDGELLCHRIEQEYQAGPLELNREAVLRTS 720
Query: 721 TNLNSQQVIYSDNNGYQMQRRPYVSYVNNSIARNYYPMVQSAFMEDGKSRLVLLSERAHG 780
TNLNSQQVIYSDNNGYQMQRRPYVSYVNNSIARNYYPMVQSAFMEDGKSRLVLLSERAHG
Sbjct: 721 TNLNSQQVIYSDNNGYQMQRRPYVSYVNNSIARNYYPMVQSAFMEDGKSRLVLLSERAHG 780
Query: 781 ISSQGNGQVEVMLHRRLWNNFDWDLGYNLTLNDTSVVHPVLWLLLGSWSLTTALRQRSAL 840
ISSQGNGQVEVMLHRRLWNNFDWDLGYNLTLNDTSVVHPVLWLLLGSWSLTTALRQRSAL
Sbjct: 781 ISSQGNGQVEVMLHRRLWNNFDWDLGYNLTLNDTSVVHPVLWLLLGSWSLTTALRQRSAL 840
Query: 841 ALQHRPVVLFGDLAGTAPKLPGPQQQEAVTLPPNLHLQILSIPGWRYSSNHTEHSQNLRK 900
ALQHRPVVLFGDLAGTAPKLPGPQQQEAVTLPPNLHLQILSIPGWRYSSNHTEHSQNLRK
Sbjct: 841 ALQHRPVVLFGDLAGTAPKLPGPQQQEAVTLPPNLHLQILSIPGWRYSSNHTEHSQNLRK 900
Query: 901 GHRGEAQADLRRVLLRLYHLYEVGEDPVLSQPVTVNLEAVLQALGSVVAVEERSLTGTWD 960
GHRGEAQADLRRVLLRLYHLYEVGEDPVLSQPVTVNLEAVLQALGSVVAVEERSLTGTWD
Sbjct: 901 GHRGEAQADLRRVLLRLYHLYEVGEDPVLSQPVTVNLEAVLQALGSVVAVEERSLTGTWD 960
Query: 961 LSMLHRWSWRTGPGRHRGDTTSPSRPPGGPIITVHPKEIRTFFIHFQQQ 1009
LSMLHRWSWRTGPGRHRGDTTSPSRPPGGPIITVHPKEIRTFFIHFQQQ
Sbjct: 961 LSMLHRWSWRTGPGRHRGDTTSPSRPPGGPIITVHPKEIRTFFIHFQQQ 1009
>gi|51873064 mannosidase, alpha, class 2B, member 1 precursor [Homo
sapiens]
Length = 1011
Score = 310 bits (793), Expect = 6e-84
Identities = 304/1068 (28%), Positives = 464/1068 (43%), Gaps = 164/1068 (15%)
Query: 8 PLLAPLLLLRPPGVQSAG----------PIRAFVVPHSHMDVGWVYTVQESM-------- 49
PL LLLL G ++ G + ++PH+H DVGW+ TV +
Sbjct: 34 PLCFFLLLLAAAGARAGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQYFYGIKNDIQ 93
Query: 50 RAYAANVYTSVVEELARGQQRRFIAVEQEFFRLWWDGVASDQQKYQVRQLLEEGRLEFVI 109
A + SV+ L RRFI VE FF WW + Q+ VR L+ +GRLEF
Sbjct: 94 HAGVQYILDSVISALLADPTRRFIYVEIAFFSRWWHQQTNATQEV-VRDLVRQGRLEFAN 152
Query: 110 GGQVMHDEAVTHLDDQILQLTEGHGFLYETFGI--RPQFSWHVDPFGASATTPTLFALAG 167
GG VM+DEA TH + Q+T G FL +TFG RP+ +WH+DPFG S +LFA G
Sbjct: 153 GGWVMNDEAATHYGAIVDQMTLGLRFLEDTFGNDGRPRVAWHIDPFGHSREQASLFAQMG 212
Query: 168 FNAHLGSRIDYDLKAAMQEARGLQFVWRGSPSLS-ERQEIFTHIMDQYSYCTPSHIPFSN 226
F+ R+DY K + ++ VWR S SL ++FT ++ Y P ++
Sbjct: 213 FDGFFFGRLDYQDKWVRMQKLEMEQVWRASTSLKPPTADLFTGVLPN-GYNPPRNL---- 267
Query: 227 RSGFYWNGVAVFPKPPQDGVYPNMSEPVTPA-NINLYAEALVANVKQRAAWFRTPHVLWP 285
W+ + V P + +P +P N + + + ++RT H +
Sbjct: 268 ----CWDVLCV--------DQPLVEDPRSPEYNAKELVDYFLNVATAQGRYYRTNHTVMT 315
Query: 286 WGCDKQFFNASVQFANMDPLLDHINSHAAE-LGVSVQYATLGDYFRALHALNVTWRVRDH 344
G D Q+ NA++ F N+D L+ +N+ A+ V V Y+T Y L+ N+TW V+ H
Sbjct: 316 MGSDFQYENANMWFKNLDKLIRLVNAQQAKGSSVHVLYSTPACYLWELNKANLTWSVK-H 374
Query: 345 HDFLPYSTEPFQAWTGFYTSRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLDPTWAL 404
DF PY+ P Q WTG+++SR +LK R + L + A G +
Sbjct: 375 DDFFPYADGPHQFWTGYFSSRPALKRYERLSYNFLQVCNQLEALVGLAANVG----PYGS 430
Query: 405 QQLQQLRWAVSEVQHHDAITGTESPKVRDMYATHLASGMLGMRKLMASIVLDELQ----- 459
L A++ +QHHDA++GT V + YA LA+G G +++ S L L+
Sbjct: 431 GDSAPLNEAMAVLQHHDAVSGTSRQHVANDYARQLAAGW-GPCEVLLSNALARLRGFKDH 489
Query: 460 ----PQAPMAASSDAGPAGHF-ASVYNPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQI 514
Q ++ + A F VYNPL V +V L V V D G VPS +
Sbjct: 490 FTFCQQLNISICPLSQTAARFQVIVYNPLGRKVNWMVRLPVSEGVFVVKDPNGRTVPSDV 549
Query: 515 ---QNSTETPSAYDLLILTTIPGLSYRHYNIRPTAGAQEGTQEPAATVASTLQFGRRLRR 571
+S +LL ++P L + Y++ AQ +P A + RR
Sbjct: 550 VIFPSSDSQAHPPELLFSASLPALGFSTYSV-----AQVPRWKPQARAPQPIP-----RR 599
Query: 572 RTSHAGRYLVPVANDCYIVLLDQDTNLMHSIWERQSNRTVRVTQEFLEYHVN-GDVKQGP 630
S A + + N+ D DT L+ I + V Q F Y+ + GD +
Sbjct: 600 SWSPA----LTIENEHIRATFDPDTGLLMEIMNMNQQLLLPVRQTFFWYNASIGDNESDQ 655
Query: 631 ISDNYLFTPG-KAAVPAWEAVEMEIVAGQLVTEIRQYFYRNMTAQNYTYAIRSRLTHVPQ 689
S Y+F P + +P ++ +V LV E+ Q F A S++ +
Sbjct: 656 ASGAYIFRPNQQKPLPVSRWAQIHLVKTPLVQEVHQNF----------SAWCSQVVRLYP 705
Query: 690 GHDGELLCHRIEQEYQAGPLEL----NREAVLRTSTNLNSQQVIYSDNNGYQM--QRRPY 743
G +E E+ GP+ + +E + R T L ++ Y+D+NG ++ +RR Y
Sbjct: 706 GQ------RHLELEWSVGPIPVGDTWGKEVISRFDTPLETKGRFYTDSNGREILERRRDY 759
Query: 744 --VSYVNNS--IARNYYPMVQSAFMEDGKSRLVLLSERAHGISSQGNGQVEVMLHRRLWN 799
+N + +A NYYP+ ++ DG +L +L++R+ G SS +G +E+M+HRRL
Sbjct: 760 RPTWKLNQTEPVAGNYYPVNTRIYITDGNMQLTVLTDRSQGGSSLRDGSLELMVHRRL-- 817
Query: 800 NFDWDLGYNLTLNDTSVVHPVLWLLLGSW---SLTTALRQRSALALQHR---------PV 847
L + V P++ G+W L A A HR P
Sbjct: 818 ---------LKDDGRGVSEPLMENGSGAWVRGRHLVLLDTAQAAAAGHRLLAEQEVLAPQ 868
Query: 848 VLFGDLAGTAPKLPGPQQQE----AVTLPPNLHLQILSIPGWRYSSNHTEHSQNLRKGHR 903
V+ G A L P + + LPP++HL L++ W
Sbjct: 869 VVLAPGGGAAYNLGAPPRTQFSGLRRDLPPSVHL--LTLASW------------------ 908
Query: 904 GEAQADLRRVLLRLYHLYEVGEDP--VLSQPVTVNLEAVLQALGSVVAVEERSLTGTW-- 959
VLLRL H + VGED LS PVT+NL + ++ ++E +L
Sbjct: 909 -----GPEMVLLRLEHQFAVGEDSGRNLSAPVTLNLRDLFSTF-TITRLQETTLVANQLR 962
Query: 960 DLSMLHRWSWRTGPGRHRGDTTSPSRPPGGPIITVHPKEIRTFFIHFQ 1007
+ + +W+ TGP H+ T P IT+ P EIRTF Q
Sbjct: 963 EAASRLKWTTNTGPTPHQ---TPYQLDPAN--ITLEPMEIRTFLASVQ 1005
>gi|51477714 mannosidase, alpha, class 2A, member 1 [Homo sapiens]
Length = 1144
Score = 281 bits (719), Expect = 2e-75
Identities = 255/953 (26%), Positives = 416/953 (43%), Gaps = 120/953 (12%)
Query: 26 PIRAFVVPHSHMDVGWVYTVQESMRAYAANVYTSVVEELARGQQRRFIAVEQEFFRLWWD 85
P++ FVVPHSH D GW+ T + R ++ ++V +L +R+FI E + WWD
Sbjct: 165 PLQVFVVPHSHNDPGWLKTFNDYFRDKTQYIFNNMVLKLKEDSRRKFIWSEISYLSKWWD 224
Query: 86 GVASDQQKYQVRQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIRPQ 145
+ Q+K V+ L+E G+LE V GG VM DEA H I QL EGH +L G++P+
Sbjct: 225 -IIDIQKKDAVKSLIENGQLEIVTGGWVMPDEATPHYFALIDQLIEGHQWLENNIGVKPR 283
Query: 146 FSWHVDPFGASATTPTLFALAGFNAHLGSRIDYDLKAAMQEARGLQFVWRGSPSLSERQE 205
W +DPFG S T L AG + L R+ Y +K + L+F WR + L +
Sbjct: 284 SGWAIDPFGHSPTMAYLLNRAGLSHMLIQRVHYAVKKHFALHKTLEFFWRQNWDLGSVTD 343
Query: 206 IFTHIMDQYSYCTP---------------SHIPFSNRSGFYWNGVAVFPKPPQDGVYPNM 250
I H+M YSY P +P R G W GV P
Sbjct: 344 ILCHMMPFYSYDIPHTCGPDPKICCQFDFKRLP-GGRFGCPW------------GVPP-- 388
Query: 251 SEPVTPANINLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNAS---VQFANMDPLLD 307
E + P N+ A L+ ++++ FRT +L P G D ++ + +QF N L D
Sbjct: 389 -ETIHPGNVQSRARMLLDQYRKKSKLFRTKVLLAPLGDDFRYCEYTEWDLQFKNYQQLFD 447
Query: 308 HINSHAAELGVSVQYATLGDYFRALHALNVTWRVRDHH-------DFLPYSTEPFQAWTG 360
++NS ++ V +Q+ TL D+F AL + T R + DF Y+ W+G
Sbjct: 448 YMNSQ-SKFKVKIQFGTLSDFFDALDKADETQRDKGQSMFPVLSGDFFTYADRDDHYWSG 506
Query: 361 FYTSRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLD---PTWALQQLQQLRWAVSEV 417
++TSR K + R + L A E ++ L A + ++ + L + R +
Sbjct: 507 YFTSRPFYKRMDRIMESHLRAAEILYYFALRQAHKYKINKFLSSSLYTALTEARRNLGLF 566
Query: 418 QHHDAITGTESPKVRDMYATHLASGMLGMRKLMAS-----IVLDEL-------------- 458
QHHDAITGT V Y T L ++ + K++ + I+ D+L
Sbjct: 567 QHHDAITGTAKDWVVVDYGTRLFHSLMVLEKIIGNSAFLLILKDKLTYDSYSPDTFLEMD 626
Query: 459 -----QPQAPMAASSDAGPAGHFASVYNPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQ 513
Q P + VYNPL ++V++ V P V+V +G PV Q
Sbjct: 627 LKQKSQDSLPQKNIIRLSAEPRYLVVYNPLEQDRISLVSVYVSSPTVQVFSASGKPVEVQ 686
Query: 514 IQ-----NSTETPSAYDLLILTTIPGLSYRHYNIRPTAGAQEGTQEPAATVASTLQFGRR 568
+ +T + +AY++ IP L + Y I +A + + G
Sbjct: 687 VSAVWDTANTISETAYEISFRAHIPPLGLKVYKILESASSNSHLADYVLYKNKVEDSGIF 746
Query: 569 LRRRTSHAGRYLVPVANDCYIVLLDQDTNLMHSIWERQSNRTVRVTQEFLEYHVNGDVKQ 628
+ + + + +++L T LM + ++ + V +F Y G +
Sbjct: 747 TIKNMINTEEGI--TLENSFVLLRFDQTGLMKQMMTKEDGKHHEVNVQFSWY---GTTIK 801
Query: 629 GPISDNYLFTPGKAAVPAWEAVE--MEIVAGQLVTEIRQYFYRNMTAQNYTYAIRSRLTH 686
S YLF P A P + + G++ +E+ +F + T+ R RL H
Sbjct: 802 RDKSGAYLFLPDGNAKPYVYTTPPFVRVTHGRIYSEVTCFF------DHVTH--RVRLYH 853
Query: 687 VPQGHDGELL----CHRIEQEYQAGPLELNREAVLRTSTNLNSQQVIYSDNNGYQMQRRP 742
+ QG +G+ + I + Y NRE ++ S+++ SQ Y+D NGYQ+Q R
Sbjct: 854 I-QGIEGQSVEVSNIVDIRKVY-------NREIAMKISSDIKSQNRFYTDLNGYQIQPRM 905
Query: 743 YVSYVNNSIARNYYPMVQSAFMEDGKSRLVLLSERAHGISSQGNGQVEVMLHRRLWNNFD 802
+S + + N YPM A+++D K RL LLS ++ G+SS +GQ+EV++ RRL D
Sbjct: 906 TLSKL--PLQANVYPMTTMAYIQDAKHRLTLLSAQSLGVSSLNSGQIEVIMDRRLMQ--D 961
Query: 803 WDLGYNLTLNDTSVVHPVLWLLLGSWSLTTALRQRSAL-----------ALQHRPVV-LF 850
+ G + D + + +LL S ++ ++ +L + PV+ +
Sbjct: 962 DNRGLEQGIQDNKITANLFRILLEKRSAVNTEEEKKSVSYPSLLSHITSSLMNHPVIPMA 1021
Query: 851 GDLAGTAPKLPGPQQQEAVTLPPNLHLQILSIPGWRYSSNHTEHSQNL--RKG 901
+ +L G +LP ++HL L + + H+ + + RKG
Sbjct: 1022 NKFSSPTLELQGEFSPLQSSLPCDIHLVNLRTIQSKVGNGHSNEAALILHRKG 1074
>gi|51477716 mannosidase, alpha, class 2A, member 2 [Homo sapiens]
Length = 1150
Score = 270 bits (690), Expect = 5e-72
Identities = 246/851 (28%), Positives = 371/851 (43%), Gaps = 96/851 (11%)
Query: 24 AGPIRAFVVPHSHMDVGWVYTVQESMRAYAANVYTSVVEELARGQQRRFIAVEQEFFRLW 83
A ++ FVVPHSH D GW+ T + ++ S+V +L +RRF+ E FF W
Sbjct: 163 AEDLQVFVVPHSHNDPGWIKTFDKYYTEQTQHILNSMVSKLQEDPRRRFLWAEVSFFAKW 222
Query: 84 WDGVASDQQKYQVRQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIR 143
WD + + Q++ VR+L+ G+LE GG VM DEA +H I QL EGH +L G
Sbjct: 223 WDNI-NVQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALIDQLIEGHQWLERNLGAT 281
Query: 144 PQFSWHVDPFGASATTPTLFALAGFNAHLGSRIDYDLKAAMQEARGLQFVWRGSPSLSER 203
P+ W VDPFG S+T P L A + L R+ Y +K L+F+WR +
Sbjct: 282 PRSGWAVDPFGYSSTMPYLLRRANLTSMLIQRVHYAIKKHFAATHSLEFMWRQTWDSDSS 341
Query: 204 QEIFTHIMDQYSYCTP----------SHIPFSNRSGFYWNGVAVFPKPPQDGVYPNMSEP 253
+IF H+M YSY P F G N + PP+
Sbjct: 342 TDIFCHMMPFYSYDVPHTCGPDPKICCQFDFKRLPGGRIN--CPWKVPPR---------A 390
Query: 254 VTPANINLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNA---SVQFANMDPLLDHIN 310
+T AN+ A L+ ++++ FR+ +L P G D ++ QF N L D N
Sbjct: 391 ITEANVAERAALLLDQYRKKSQLFRSNVLLVPLGDDFRYDKPQEWDAQFFNYQRLFDFFN 450
Query: 311 SHAAELGVSVQYATLGDYFRALH-ALNVTWRVRD------HHDFLPYSTEPFQAWTGFYT 363
S L V Q+ TL DYF AL+ V R DF Y+ WTG+YT
Sbjct: 451 SR-PNLHVQAQFGTLSDYFDALYKRTGVEPGARPPGFPVLSGDFFSYADREDHYWTGYYT 509
Query: 364 SRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLDPTWALQQ---LQQLRWAVSEVQHH 420
SR K L R A L E +++ A R L + L L + R + QHH
Sbjct: 510 SRPFYKSLDRVLEAHLRGAEVLYSLAAAHARRSGLAGRYPLSDFTLLTEARRTLGLFQHH 569
Query: 421 DAITGTESPKVRDMYATHLASGMLGMRKLMAS----IVLDE-----LQPQAPM------A 465
DAITGT V Y L ++ +++++ +VL + P+AP
Sbjct: 570 DAITGTAKEAVVVDYGVRLLRSLVNLKQVIIHAAHYLVLGDKETYHFDPEAPFLQVDDTR 629
Query: 466 ASSDAGP---------AGHFASVYNPLAWTVTTIVTLTVGFPGVRVTDEAGHPVPSQI-- 514
S DA P + F ++NPL ++V+L V P VRV E G P+ QI
Sbjct: 630 LSHDALPERTVIQLDSSPRFVVLFNPLEQERFSMVSLLVNSPRVRVLSEEGQPLAVQISA 689
Query: 515 --QNSTE-TPSAYDLLILTTIPGLSYRHYNIRPTAGAQEGTQEPAATVASTLQFGRRLR- 570
++TE P Y + + +P L + +G + ++V L GR+L
Sbjct: 690 HWSSATEAVPDVYQVSVPVRLPALG---LGVLQLQLGLDGHRTLPSSVRIYLH-GRQLSV 745
Query: 571 -------RRTSHAGRYLVPVANDCYIVLLDQDTNLMHSIWERQSNRTVRVTQEFLEYHVN 623
R +G ++N V T L+ SI +V + L Y
Sbjct: 746 SRHEAFPLRVIDSGTSDFALSNRYMQVWFSGLTGLLKSIRRVDEEHEQQVDMQVLVY--- 802
Query: 624 GDVKQGPISDNYLFTPGKAAVP--AWEAVEMEIVAGQLVTEIRQYFYRNMTAQNYTYAIR 681
G S YLF P A P E + + G +E+ Y+ ++ A+R
Sbjct: 803 GTRTSKDKSGAYLFLPDGEAKPYVPKEPPVLRVTEGPFFSEVVAYY------EHIHQAVR 856
Query: 682 SRLTHVPQGHDGELLCHRIEQEYQAGPLELNREAVLRTSTNLNSQQVIYSDNNGYQMQRR 741
+G ++ ++Y +N+E L T+++SQ + ++D NG+Q+Q R
Sbjct: 857 LYNLPGVEGLSLDISSLVDIRDY------VNKELALHIHTDIDSQGIFFTDLNGFQVQPR 910
Query: 742 PYVSYVNNSIARNYYPMVQSAFMEDGKSRLVLLSERAHGISSQGNGQVEVMLHRRLWNNF 801
Y+ + + N+YPM A+++D + RL L + +A G+SS +GQ+EV+L RRL +
Sbjct: 911 RYLKKL--PLQANFYPMPVMAYIQDAQKRLTLHTAQALGVSSLKDGQLEVILDRRLMQDD 968
Query: 802 DWDLGYNLTLN 812
+ LG L N
Sbjct: 969 NRGLGQGLKDN 979
>gi|46852164 mannosidase, alpha, class 2C, member 1 [Homo sapiens]
Length = 1040
Score = 43.9 bits (102), Expect = 8e-04
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 12/166 (7%)
Query: 34 HSHMDVGWVYTVQESMRAYAANVYTSVVEELARGQQRRFI---AVEQEFFRLWWDGVASD 90
H H+D W++ +E++R A + + + ++ + R + F A + E+ + + G+ S
Sbjct: 258 HCHIDTAWLWPFKETVRKCARS-WVTALQLMERNPEFIFACSQAQQLEWVKSRYPGLYSR 316
Query: 91 QQKYQVRQLLEEGRLEFVIGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGIRPQFSWHV 150
Q++ R G+ V G V D + + + Q +G F + FG W
Sbjct: 317 IQEFACR-----GQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQNFFLQEFGKMCSEFWLP 371
Query: 151 DPFGASATTPTLFALAGFNAHLGSRIDYDLKAAMQEARGLQFVWRG 196
D FG SA P + G L ++ ++L + F W G
Sbjct: 372 DTFGYSAQLPQIMHGCGIRRFLTQKLSWNLVNSFPHH---TFFWEG 414
>gi|15529982 IMP4, U3 small nucleolar ribonucleoprotein, homolog
[Homo sapiens]
Length = 291
Score = 34.7 bits (78), Expect = 0.46
Identities = 38/144 (26%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 493 LTVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLLILT----TIPGLSYRHYNIRPTAG- 547
L + FPG + + H V + ++ + + DLL++ T GL H PTA
Sbjct: 104 LKLVFPGAQRMNRGRHEVGALVR-ACKANGVTDLLVVHEHRGTPVGLIVSHLPFGPTAYF 162
Query: 548 -----------AQEGTQEPAATVASTLQFGRRLRRRTSHAGRYLVPVAND---CYIVLLD 593
GT A T F RL +R S RYL PV D I +
Sbjct: 163 TLCNVVMRHDIPDLGTMSEAKPHLITHGFSSRLGKRVSDILRYLFPVPKDDSHRVITFAN 222
Query: 594 QD--TNLMHSIWERQSNRTVRVTQ 615
QD + H ++++ +R V +T+
Sbjct: 223 QDDYISFRHHVYKKTDHRNVELTE 246
>gi|7706617 glycerophosphodiester phosphodiesterase 1 [Homo sapiens]
Length = 331
Score = 32.3 bits (72), Expect = 2.3
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Query: 698 HRIEQEYQAGPLELNREAVLRTSTNLNSQQVIYSDNNGY-----QMQRRPYVSY---VNN 749
HR+ ++ + REAV LN I+ D G+ + ++ Y+ + NN
Sbjct: 143 HRLRNDFPDEKIPTLREAVAEC---LNHNLTIFFDVKGHAHKATEALKKMYMEFPQLYNN 199
Query: 750 SIARNYYPMVQSAFMEDGKSRLVLLSERAHGISSQGNGQVEVMLHRRLWNNFDWDLGYNL 809
S+ ++ P V + + + L+ R +S G+G+ + W +F + + ++
Sbjct: 200 SVVCSFLPEVIYKMRQTDRDVITALTHRPWSLSHTGDGKPR---YDTFWKHFIFVM-MDI 255
Query: 810 TLNDTSVVHPVLWLLLG 826
L+ + +H +LW L G
Sbjct: 256 LLDWS--MHNILWYLCG 270
>gi|21361937 proline rich 7 (synaptic) [Homo sapiens]
Length = 274
Score = 31.6 bits (70), Expect = 3.9
Identities = 25/74 (33%), Positives = 32/74 (43%), Gaps = 11/74 (14%)
Query: 834 LRQRSALALQHRPVVLFGDLAGTAPKLPGPQQQEAVTLPPNLHLQILSIPGWRYSSNHTE 893
LR+++ AL+ P+ L G LAG+ P L PQ P H L P +S H
Sbjct: 46 LREQNLRALELEPLELEGSLAGSPPGLAPPQ--------PPPHRSRLEAPAHAHSHPHVH 97
Query: 894 HSQNLRKGHRGEAQ 907
L H G AQ
Sbjct: 98 VHPLL---HHGPAQ 108
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 31.2 bits (69), Expect = 5.1
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 7/130 (5%)
Query: 434 MYATHLASGMLGMRKLMASIVLDELQPQAPMAASSDAGPAGHFASVYNPLAWTVTTIVTL 493
++ T A+ +L + I + A +++ AG + + Y+ TT+
Sbjct: 4289 LFPTRSATSVLVGEPTTSPISSGSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPA 4348
Query: 494 TVGFPGVRVTDEAGHPVPSQIQNSTETPSAYDLLILTTIPGLSYRHYNIRPTAGAQEGTQ 553
+ GV H P + ++T PS+ TT+PG+S + G+ + T
Sbjct: 4349 STTSSGVSEESTTSHSRPGSM-HTTAFPSS------TTMPGVSQESTASHSSPGSTDTTL 4401
Query: 554 EPAATVASTL 563
P +T AS+L
Sbjct: 4402 SPGSTTASSL 4411
>gi|34328899 protein tyrosine phosphatase, non-receptor type 14
[Homo sapiens]
Length = 1187
Score = 31.2 bits (69), Expect = 5.1
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 860 LPGPQQQEAVTLPPNLHLQILSIPGWRYSSNHTEHSQNLRKG--HRGEAQADLRRVLLRL 917
+PG A +P + H I+ +P +R + ++ + +++G H LR + +
Sbjct: 415 IPGSDIMRADYIPSHRHSAII-VPSYRPTPDYETVMRQMKRGILHTDSQSQSLRNLNIIN 473
Query: 918 YHLYEVGEDPVLSQP 932
H Y ED V SQP
Sbjct: 474 THAYNQPEDLVYSQP 488
>gi|150456424 RW1 protein [Homo sapiens]
Length = 1883
Score = 31.2 bits (69), Expect = 5.1
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 3/126 (2%)
Query: 359 TGFYTSRSSLKGLARRASALLYAGESMFTRYLWPAPRGHLDPTWALQQLQQLRWAVSEVQ 418
TG S+ L +AS + + YLW +P P+W A S +
Sbjct: 1734 TGEVFSKLGLSRSCNQASQRSWNEFNSGPSYLWESPATDPSPSWPASSGSPTHTATSVLG 1793
Query: 419 HHDAITGTESPKVRDMYATHLASGM--LGMRKLMASIVLDELQPQAPMAASSDAGPAGHF 476
+ + T +P +++++L+S + +ASI L + A S + PA
Sbjct: 1794 NTSGLWST-TPFSSSIWSSNLSSALPFTTPANTLASIGLMGTENSPAPHAPSTSSPADDL 1852
Query: 477 ASVYNP 482
YNP
Sbjct: 1853 GQTYNP 1858
>gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 30.8 bits (68), Expect = 6.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 532 IPGLSYRHYNIRPTAGAQEGTQEPAATVASTLQFGRRLRRRTSHAGRYLVP 582
+PG++ H +R +GA+ E AA AS Q RRR GR P
Sbjct: 33 VPGVARGHITVRGESGAEPIMGESAAATASLFQ-----RRRRGRGGRVTFP 78
>gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 30.8 bits (68), Expect = 6.7
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Query: 532 IPGLSYRHYNIRPTAGAQEGTQEPAATVASTLQFGRRLRRRTSHAGRYLVP 582
+PG++ H +R +GA+ E AA AS Q RRR GR P
Sbjct: 33 VPGVARGHITVRGESGAEPIMGESAAATASLFQ-----RRRRGRGGRVTFP 78
>gi|98986457 host cell factor 1 [Homo sapiens]
Length = 2035
Score = 30.8 bits (68), Expect = 6.7
Identities = 43/177 (24%), Positives = 65/177 (36%), Gaps = 24/177 (13%)
Query: 393 APRGHLDPTWALQQLQQLRWAVSEVQHHDAITGTESPKVRDMYATHLASGMLGMRKLMAS 452
A G PT +Q + Q ++V A +G E+ V D+ + LAS +
Sbjct: 940 AAGGLTTPTITMQPVSQ----PTQVTLITAPSGVEAQPVHDLPVSILASPTTEQPTATVT 995
Query: 453 IV---LDELQPQAPMAASSDAGPAGHFASVYNPLAWTVTTIVTLTVGFPGVRVTDEAGHP 509
I ++QP S+ H N T TT V +G GHP
Sbjct: 996 IADSGQGDVQPGTVTLVCSNPPCETHETGTTN----TATTTVVANLG----------GHP 1041
Query: 510 VPSQIQNSTETPSAYDLLILTTI---PGLSYRHYNIRPTAGAQEGTQEPAATVASTL 563
P+Q+Q + A L+ +T+ G R + P + GT A T S +
Sbjct: 1042 QPTQVQFVCDRQEAAASLVTSTVGQQNGSVVRVCSNPPCETHETGTTNTATTATSNM 1098
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,327,540
Number of Sequences: 37866
Number of extensions: 1846196
Number of successful extensions: 4529
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4480
Number of HSP's gapped (non-prelim): 32
length of query: 1009
length of database: 18,247,518
effective HSP length: 112
effective length of query: 897
effective length of database: 14,006,526
effective search space: 12563853822
effective search space used: 12563853822
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.