Search of human proteins with 50659074

Search of human proteins with 50659074

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50659074 ATP synthase, H+ transporting, mitochondrial F0
complex, subunit C3 precursor [Homo sapiens]
         (142 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4502301 ATP synthase, H+ transporting, mitochondrial F0 compl...   273   3e-74
gi|50659074 ATP synthase, H+ transporting, mitochondrial F0 comp...   273   3e-74
gi|85794840 ATP synthase, H+ transporting, mitochondrial F0 comp...   193   5e-50
gi|50593533 ATP synthase, H+ transporting, mitochondrial F0 comp...   193   5e-50
gi|50659069 ATP synthase, H+ transporting, mitochondrial F0 comp...   178   2e-45
gi|4885081 ATP synthase, H+ transporting, mitochondrial F0 compl...   178   2e-45
gi|169206305 PREDICTED: similar to hCG1639781 [Homo sapiens]          134   2e-32
gi|239750572 PREDICTED: similar to hCG1639781 [Homo sapiens]          134   2e-32
gi|239744873 PREDICTED: hypothetical protein LOC390424 [Homo sap...   134   2e-32
gi|4502313 ATPase, H+ transporting, lysosomal, V0 subunit c [Hom...    34   0.047
gi|167466160 chloride channel 7 isoform b [Homo sapiens]               31   0.39 
gi|14149607 chloride channel 7 isoform a [Homo sapiens]                31   0.39 
gi|49619231 solute carrier family 37 member 1 [Homo sapiens]           31   0.39 
gi|86792634 ATPase, H+ transporting, lysosomal 21kDa, V0 subunit...    29   1.1  
gi|4757816 ATPase, H+ transporting, lysosomal 21kDa, V0 subunit ...    29   1.1  
gi|4506975 solute carrier family 12 (sodium/potassium/chloride t...    29   1.5  
gi|156627579 C-type lectin domain family 3, member B [Homo sapiens]    28   2.6  
gi|217416366 major facilitator superfamily domain containing 9 [...    28   2.6  
gi|40217833 G protein-coupled receptor family C, group 5, member...    28   3.3  
gi|40217831 G protein-coupled receptor family C, group 5, member...    28   3.3  
gi|192807292 keratin 24 [Homo sapiens]                                 27   5.7  
gi|194363768 homeobox D9 [Homo sapiens]                                27   5.7  
gi|56790897 LMBR1 domain containing 2 [Homo sapiens]                   27   5.7  
gi|239740898 PREDICTED: hypothetical protein [Homo sapiens]            27   7.4  
gi|119703744 desmoglein 1 preproprotein [Homo sapiens]                 27   7.4  
gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens]             27   7.4  
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s...    27   7.4  
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s...    27   7.4  
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s...    27   7.4  
gi|4502565 calpain, small subunit 1 [Homo sapiens]                     26   9.7  

>gi|4502301 ATP synthase, H+ transporting, mitochondrial F0 complex,
           subunit C3 precursor [Homo sapiens]
          Length = 142

 Score =  273 bits (698), Expect = 3e-74
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 60
           MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF
Sbjct: 1   MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 60

Query: 61  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 120
           QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG
Sbjct: 61  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 120

Query: 121 FALSEAMGLFCLMVAFLILFAM 142
           FALSEAMGLFCLMVAFLILFAM
Sbjct: 121 FALSEAMGLFCLMVAFLILFAM 142


>gi|50659074 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit C3 precursor [Homo sapiens]
          Length = 142

 Score =  273 bits (698), Expect = 3e-74
 Identities = 142/142 (100%), Positives = 142/142 (100%)

Query: 1   MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 60
           MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF
Sbjct: 1   MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 60

Query: 61  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 120
           QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG
Sbjct: 61  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 120

Query: 121 FALSEAMGLFCLMVAFLILFAM 142
           FALSEAMGLFCLMVAFLILFAM
Sbjct: 121 FALSEAMGLFCLMVAFLILFAM 142


>gi|85794840 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit C2 isoform b precursor [Homo sapiens]
          Length = 198

 Score =  193 bits (490), Expect = 5e-50
 Identities = 106/142 (74%), Positives = 116/142 (81%), Gaps = 1/142 (0%)

Query: 1   MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 60
           MFAC+K   TPSL+++ S++  RP+SA VL RPE   T E  +    +    S +  R F
Sbjct: 58  MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEIL-TDESLSSLAVSCPLTSLVSSRSF 116

Query: 61  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 120
           QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG
Sbjct: 117 QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 176

Query: 121 FALSEAMGLFCLMVAFLILFAM 142
           FALSEAMGLFCLMVAFLILFAM
Sbjct: 177 FALSEAMGLFCLMVAFLILFAM 198


>gi|50593533 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit C2 isoform a precursor [Homo sapiens]
          Length = 157

 Score =  193 bits (490), Expect = 5e-50
 Identities = 106/142 (74%), Positives = 116/142 (81%), Gaps = 1/142 (0%)

Query: 1   MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 60
           MFAC+K   TPSL+++ S++  RP+SA VL RPE   T E  +    +    S +  R F
Sbjct: 17  MFACSKFVSTPSLVKSTSQLLSRPLSAVVLKRPEIL-TDESLSSLAVSCPLTSLVSSRSF 75

Query: 61  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 120
           QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG
Sbjct: 76  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 135

Query: 121 FALSEAMGLFCLMVAFLILFAM 142
           FALSEAMGLFCLMVAFLILFAM
Sbjct: 136 FALSEAMGLFCLMVAFLILFAM 157


>gi|50659069 ATP synthase, H+ transporting, mitochondrial F0
           complex, subunit C1 precursor [Homo sapiens]
          Length = 136

 Score =  178 bits (451), Expect = 2e-45
 Identities = 100/142 (70%), Positives = 109/142 (76%), Gaps = 6/142 (4%)

Query: 1   MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 60
           M     L  +P+LIR  +R   RP+SAS L+ P  S      + F        Q+ +REF
Sbjct: 1   MQTAGALFISPALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFP------LQVARREF 54

Query: 61  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 120
           QTS +SRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG
Sbjct: 55  QTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 114

Query: 121 FALSEAMGLFCLMVAFLILFAM 142
           FALSEAMGLFCLMVAFLILFAM
Sbjct: 115 FALSEAMGLFCLMVAFLILFAM 136


>gi|4885081 ATP synthase, H+ transporting, mitochondrial F0 complex,
           subunit C1 precursor [Homo sapiens]
          Length = 136

 Score =  178 bits (451), Expect = 2e-45
 Identities = 100/142 (70%), Positives = 109/142 (76%), Gaps = 6/142 (4%)

Query: 1   MFACAKLACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREF 60
           M     L  +P+LIR  +R   RP+SAS L+ P  S      + F        Q+ +REF
Sbjct: 1   MQTAGALFISPALIRCCTRGLIRPVSASFLNSPVNSSKQPSYSNFP------LQVARREF 54

Query: 61  QTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 120
           QTS +SRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG
Sbjct: 55  QTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG 114

Query: 121 FALSEAMGLFCLMVAFLILFAM 142
           FALSEAMGLFCLMVAFLILFAM
Sbjct: 115 FALSEAMGLFCLMVAFLILFAM 136


>gi|169206305 PREDICTED: similar to hCG1639781 [Homo sapiens]
          Length = 125

 Score =  134 bits (338), Expect = 2e-32
 Identities = 79/125 (63%), Positives = 88/125 (70%), Gaps = 14/125 (11%)

Query: 7   LACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAIS 66
           L CT  LIR         +SAS L+ P+ S      +      +   ++ +REFQTS +S
Sbjct: 15  LCCTWGLIRT--------VSASFLNSPDNSPKQPSYS------SSPLRVARREFQTSIVS 60

Query: 67  RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 126
           RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA
Sbjct: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120

Query: 127 MGLFC 131
           MGLFC
Sbjct: 121 MGLFC 125


>gi|239750572 PREDICTED: similar to hCG1639781 [Homo sapiens]
          Length = 125

 Score =  134 bits (338), Expect = 2e-32
 Identities = 79/125 (63%), Positives = 88/125 (70%), Gaps = 14/125 (11%)

Query: 7   LACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAIS 66
           L CT  LIR         +SAS L+ P+ S      +      +   ++ +REFQTS +S
Sbjct: 15  LCCTWGLIRT--------VSASFLNSPDNSPKQPSYS------SSPLRVARREFQTSIVS 60

Query: 67  RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 126
           RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA
Sbjct: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120

Query: 127 MGLFC 131
           MGLFC
Sbjct: 121 MGLFC 125


>gi|239744873 PREDICTED: hypothetical protein LOC390424 [Homo
           sapiens]
          Length = 125

 Score =  134 bits (338), Expect = 2e-32
 Identities = 79/125 (63%), Positives = 88/125 (70%), Gaps = 14/125 (11%)

Query: 7   LACTPSLIRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAIS 66
           L CT  LIR         +SAS L+ P+ S      +      +   ++ +REFQTS +S
Sbjct: 15  LCCTWGLIRT--------VSASFLNSPDNSPKQPSYS------SSPLRVARREFQTSIVS 60

Query: 67  RDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEA 126
           RDID AAK IGAGAATVGVAGSGAGIG VFGSLIIGYARN SLKQQLFSYA LGFALSEA
Sbjct: 61  RDIDIAAKLIGAGAATVGVAGSGAGIGKVFGSLIIGYARNLSLKQQLFSYATLGFALSEA 120

Query: 127 MGLFC 131
           MGLFC
Sbjct: 121 MGLFC 125


>gi|4502313 ATPase, H+ transporting, lysosomal, V0 subunit c [Homo
           sapiens]
          Length = 155

 Score = 33.9 bits (76), Expect = 0.047
 Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 7/79 (8%)

Query: 63  SAISRDIDTAAKFIGAGAA-TVGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAIL 119
           ++++ DI     F+  GA  +VG++G  AG  IG V  + + G A+ P    +LF   IL
Sbjct: 78  NSLNDDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMIL 133

Query: 120 GFALSEAMGLFCLMVAFLI 138
               +E +GL+ L+VA ++
Sbjct: 134 ILIFAEVLGLYGLIVALIL 152


>gi|167466160 chloride channel 7 isoform b [Homo sapiens]
          Length = 781

 Score = 30.8 bits (68), Expect = 0.39
 Identities = 20/59 (33%), Positives = 27/59 (45%)

Query: 41  GSTVFNGAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSL 99
           GS +  G   G S  ++R+F+     R       F+ AGAA    A  GA +G V  SL
Sbjct: 230 GSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSL 288


>gi|14149607 chloride channel 7 isoform a [Homo sapiens]
          Length = 805

 Score = 30.8 bits (68), Expect = 0.39
 Identities = 20/59 (33%), Positives = 27/59 (45%)

Query: 41  GSTVFNGAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSL 99
           GS +  G   G S  ++R+F+     R       F+ AGAA    A  GA +G V  SL
Sbjct: 254 GSVIAAGISQGRSTSLKRDFKIFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSL 312


>gi|49619231 solute carrier family 37 member 1 [Homo sapiens]
          Length = 533

 Score = 30.8 bits (68), Expect = 0.39
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 8/89 (8%)

Query: 52  VSQLIQREFQTSAISRDIDTAAKFIGAG--AATVGVAGSGAGIGTVFGSLIIGYARNPSL 109
           V+Q+I    QT+     +     + G G     +GV  S   +G + GSLI GY  +   
Sbjct: 160 VTQVINGLVQTTGWPSVVTCLGNWFGKGRRGLIMGVWNSHTSVGNILGSLIAGYWVSTCW 219

Query: 110 KQQLFSYAILGFALSEAMGLFCLMVAFLI 138
                S+ + G A+  AMG+ C +  FLI
Sbjct: 220 G---LSFVVPG-AIVAAMGIVCFL--FLI 242


>gi|86792634 ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b
           isoform 2 [Homo sapiens]
          Length = 158

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 67  RDIDTAAKFIGAGAATVGVAG--SGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALS 124
           R+        GAG  TVG++    G  +G V     +  A+NPSL  ++    I G    
Sbjct: 82  RNYHAGYSMFGAGL-TVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFG---- 136

Query: 125 EAMGLFCLMVAFL 137
            A+GLF ++VA L
Sbjct: 137 SAIGLFGVIVAIL 149


>gi|4757816 ATPase, H+ transporting, lysosomal 21kDa, V0 subunit b
           isoform 1 [Homo sapiens]
          Length = 205

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 67  RDIDTAAKFIGAGAATVGVAG--SGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALS 124
           R+        GAG  TVG++    G  +G V     +  A+NPSL  ++    I G    
Sbjct: 129 RNYHAGYSMFGAGL-TVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFG---- 183

Query: 125 EAMGLFCLMVAFL 137
            A+GLF ++VA L
Sbjct: 184 SAIGLFGVIVAIL 196


>gi|4506975 solute carrier family 12 (sodium/potassium/chloride
           transporters), member 2 [Homo sapiens]
          Length = 1212

 Score = 28.9 bits (63), Expect = 1.5
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 17  GSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLI-----QREFQTSAISRDIDT 71
           G+ V   P  A+  SR       EG      A +G+ + +     Q  FQ   +S +   
Sbjct: 36  GTAVPSVPEDAAPASRDGGGVRDEGPAA---AGDGLGRPLGPTPSQSRFQVDLVSENAGR 92

Query: 72  AAKFIGAGAATVGVAGSGAG 91
           AA    A AA    AG+GAG
Sbjct: 93  AAAAAAAAAAAAAAAGAGAG 112


>gi|156627579 C-type lectin domain family 3, member B [Homo sapiens]
          Length = 202

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)

Query: 17  GSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNG 51
           G+R+AY+     + ++P+  +T E   V +GA NG
Sbjct: 149 GARIAYKNWETEITAQPDGGKT-ENCAVLSGAANG 182


>gi|217416366 major facilitator superfamily domain containing 9
           [Homo sapiens]
          Length = 474

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 5/81 (6%)

Query: 60  FQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIG-----YARNPSLKQQLF 114
           F  S +   +    K +GA     G+ GS  GI  +F S ++G       R  SL   + 
Sbjct: 58  FGVSMVVPLLSLHVKSLGASPTVAGIVGSSYGILQLFSSTLVGCWSDVVGRRSSLLACIL 117

Query: 115 SYAILGFALSEAMGLFCLMVA 135
             A+    L  A  +F  ++A
Sbjct: 118 LSALGYLLLGAATNVFLFVLA 138


>gi|40217833 G protein-coupled receptor family C, group 5, member C
           isoform b [Homo sapiens]
          Length = 453

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 86  AGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG---FALSEAMGLFCLMVAFLI 138
           A +GAGI T F   II  A  P + Q     ++LG   F L   +GLFCL+ A ++
Sbjct: 67  AVAGAGIVTTFVLTIILVASLPFV-QDTKKRSLLGTQVFFLLGTLGLFCLVFACVV 121


>gi|40217831 G protein-coupled receptor family C, group 5, member C
           isoform a [Homo sapiens]
          Length = 486

 Score = 27.7 bits (60), Expect = 3.3
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 86  AGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILG---FALSEAMGLFCLMVAFLI 138
           A +GAGI T F   II  A  P + Q     ++LG   F L   +GLFCL+ A ++
Sbjct: 100 AVAGAGIVTTFVLTIILVASLPFV-QDTKKRSLLGTQVFFLLGTLGLFCLVFACVV 154


>gi|192807292 keratin 24 [Homo sapiens]
          Length = 525

 Score = 26.9 bits (58), Expect = 5.7
 Identities = 26/93 (27%), Positives = 35/93 (37%), Gaps = 4/93 (4%)

Query: 15  RAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAISRDIDTAAK 74
           RAG   + R +SA   S    SR G G +   G + G S        + A          
Sbjct: 11  RAGGSSSAR-VSAGGSSFSSGSRCGLGGSSAQGFRGGASSCSLSGGSSGAFGGSFGGGFG 69

Query: 75  FIGAGAATVGVAGSGAGI--GTVFGSLIIGYAR 105
               G    G +GSG G   G+ FG  + G+ R
Sbjct: 70  SCSVGGGFGGASGSGTGFGGGSSFGG-VSGFGR 101


>gi|194363768 homeobox D9 [Homo sapiens]
          Length = 352

 Score = 26.9 bits (58), Expect = 5.7
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 14  IRAGSRVAYRPISASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAISRDIDTAA 73
           I+  +R A  P +A       AS T   ST  + +       + RE Q S+   +    +
Sbjct: 160 IKPETRAAPAPATA-------ASTTSSSSTSLSSSSKRTECSVARESQGSS-GPEFSCNS 211

Query: 74  KFIGAGAATVGVAGSGAGIGTVFGS 98
                 AA  G  G GAGIG   G+
Sbjct: 212 FLQEKAAAATGGTGPGAGIGAATGT 236


>gi|56790897 LMBR1 domain containing 2 [Homo sapiens]
          Length = 695

 Score = 26.9 bits (58), Expect = 5.7
 Identities = 13/40 (32%), Positives = 21/40 (52%)

Query: 95  VFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMV 134
           +FG+ +I  A NP L  +      +G A +   GLF L++
Sbjct: 161 IFGAFLIYVAVNPHLHLEWNQLQTIGIAAANTWGLFLLVL 200


>gi|239740898 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1542

 Score = 26.6 bits (57), Expect = 7.4
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 35  ASRTGEGSTVFN--GAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGI 92
           AS  G  +T  +  G+Q  +  +   E  T++ +   +T     G+G  T  +AGS + I
Sbjct: 59  ASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGTTTASMAGSESTI 118

Query: 93  GT 94
            T
Sbjct: 119 ST 120


>gi|119703744 desmoglein 1 preproprotein [Homo sapiens]
          Length = 1049

 Score = 26.6 bits (57), Expect = 7.4
 Identities = 12/33 (36%), Positives = 22/33 (66%), Gaps = 1/33 (3%)

Query: 77   GAGAAT-VGVAGSGAGIGTVFGSLIIGYARNPS 108
            G+GA +  G++G G G+ ++ G+  IG+ R+ S
Sbjct: 987  GSGALSGAGISGGGIGLSSLGGTASIGHMRSSS 1019


>gi|5454016 retinitis pigmentosa RP1 protein [Homo sapiens]
          Length = 2156

 Score = 26.6 bits (57), Expect = 7.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 42   STVFNGAQNGVSQLIQREFQTSAISRDIDTAAKFI 76
            +TV NG +    +LIQ E + S     ID ++K I
Sbjct: 1480 NTVVNGGEQATEELIQEEVEASKTLELIDISSKNI 1514


>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
          sapiens]
          Length = 1314

 Score = 26.6 bits (57), Expect = 7.4
 Identities = 22/74 (29%), Positives = 26/74 (35%)

Query: 26 SASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGV 85
          S+S     E      G  V   A +G      R  + SA S  +       GAG    G 
Sbjct: 5  SSSEEESDEIVEEESGKEVLGSAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGG 64

Query: 86 AGSGAGIGTVFGSL 99
           GSGA  G   G L
Sbjct: 65 GGSGASSGGGAGGL 78


>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
          sapiens]
          Length = 1353

 Score = 26.6 bits (57), Expect = 7.4
 Identities = 22/74 (29%), Positives = 26/74 (35%)

Query: 26 SASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGV 85
          S+S     E      G  V   A +G      R  + SA S  +       GAG    G 
Sbjct: 5  SSSEEESDEIVEEESGKEVLGSAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGG 64

Query: 86 AGSGAGIGTVFGSL 99
           GSGA  G   G L
Sbjct: 65 GGSGASSGGGAGGL 78


>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
          sapiens]
          Length = 1274

 Score = 26.6 bits (57), Expect = 7.4
 Identities = 22/74 (29%), Positives = 26/74 (35%)

Query: 26 SASVLSRPEASRTGEGSTVFNGAQNGVSQLIQREFQTSAISRDIDTAAKFIGAGAATVGV 85
          S+S     E      G  V   A +G      R  + SA S  +       GAG    G 
Sbjct: 5  SSSEEESDEIVEEESGKEVLGSAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGG 64

Query: 86 AGSGAGIGTVFGSL 99
           GSGA  G   G L
Sbjct: 65 GGSGASSGGGAGGL 78


>gi|4502565 calpain, small subunit 1 [Homo sapiens]
          Length = 268

 Score = 26.2 bits (56), Expect = 9.7
 Identities = 12/26 (46%), Positives = 13/26 (50%)

Query: 77  GAGAATVGVAGSGAGIGTVFGSLIIG 102
           G G    G  G G G+G V G LI G
Sbjct: 10  GGGGGGGGGGGLGGGLGNVLGGLISG 35


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.136    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,329,208
Number of Sequences: 37866
Number of extensions: 160991
Number of successful extensions: 794
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 755
Number of HSP's gapped (non-prelim): 34
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.