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Search of human proteins with 50539412
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50539412 cellular modulator of immune recognition isoform 6
[Homo sapiens]
(291 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50539414 cellular modulator of immune recognition isoform 7 [... 609 e-174
gi|50539412 cellular modulator of immune recognition isoform 6 [... 609 e-174
gi|50539410 cellular modulator of immune recognition isoform 8 [... 609 e-174
gi|8923613 membrane-associated RING-CH protein I [Homo sapiens] 355 2e-98
gi|53729332 membrane-associated ring finger (C3HC4) 2 isoform 1 ... 91 2e-18
gi|53729330 membrane-associated ring finger (C3HC4) 2 isoform 1 ... 91 2e-18
gi|30425370 membrane-associated ring finger (C3HC4) 3 [Homo sapi... 82 4e-16
gi|33589846 membrane-associated ring finger (C3HC4) 6 [Homo sapi... 78 8e-15
gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2 ... 78 8e-15
gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 73 3e-13
gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo sapi... 72 6e-13
gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens] 72 7e-13
gi|154937342 ring finger protein 190 [Homo sapiens] 62 8e-10
gi|154937340 ring finger protein 190 [Homo sapiens] 62 8e-10
gi|12383066 axotrophin [Homo sapiens] 53 3e-07
gi|8923415 membrane-associated ring finger (C3HC4) 5 [Homo sapiens] 45 6e-05
gi|7706039 ring finger protein 181 [Homo sapiens] 45 1e-04
gi|21389515 ring finger protein 145 [Homo sapiens] 42 6e-04
gi|21314654 ring finger protein 139 [Homo sapiens] 40 0.002
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens] 38 0.009
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens] 37 0.020
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens] 37 0.020
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 36 0.046
gi|150170725 zinc and ring finger 4 [Homo sapiens] 34 0.17
gi|7657522 ring finger protein 7 isoform 1 [Homo sapiens] 33 0.23
gi|40807469 TRAF interacting protein [Homo sapiens] 33 0.29
gi|21539663 praja 1 isoform c [Homo sapiens] 33 0.29
gi|74048537 praja 1 isoform b [Homo sapiens] 33 0.29
gi|41281725 praja 1 isoform a [Homo sapiens] 33 0.29
gi|13569903 ring finger protein 32 [Homo sapiens] 33 0.29
>gi|50539414 cellular modulator of immune recognition isoform 7
[Homo sapiens]
Length = 291
Score = 609 bits (1570), Expect = e-174
Identities = 291/291 (100%), Positives = 291/291 (100%)
Query: 1 MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA 60
MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA
Sbjct: 1 MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA 60
Query: 61 PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT 120
PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT
Sbjct: 61 PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT 120
Query: 121 RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT 180
RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT
Sbjct: 121 RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT 180
Query: 181 AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN 240
AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN
Sbjct: 181 AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN 240
Query: 241 CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 291
CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV
Sbjct: 241 CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 291
>gi|50539412 cellular modulator of immune recognition isoform 6
[Homo sapiens]
Length = 291
Score = 609 bits (1570), Expect = e-174
Identities = 291/291 (100%), Positives = 291/291 (100%)
Query: 1 MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA 60
MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA
Sbjct: 1 MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA 60
Query: 61 PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT 120
PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT
Sbjct: 61 PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT 120
Query: 121 RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT 180
RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT
Sbjct: 121 RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT 180
Query: 181 AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN 240
AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN
Sbjct: 181 AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN 240
Query: 241 CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 291
CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV
Sbjct: 241 CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 291
>gi|50539410 cellular modulator of immune recognition isoform 8
[Homo sapiens]
Length = 291
Score = 609 bits (1570), Expect = e-174
Identities = 291/291 (100%), Positives = 291/291 (100%)
Query: 1 MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA 60
MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA
Sbjct: 1 MSMPLHQISAIPSQDAISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASA 60
Query: 61 PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT 120
PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT
Sbjct: 61 PAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT 120
Query: 121 RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT 180
RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT
Sbjct: 121 RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRT 180
Query: 181 AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN 240
AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN
Sbjct: 181 AEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQN 240
Query: 241 CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 291
CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV
Sbjct: 241 CPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIHV 291
>gi|8923613 membrane-associated RING-CH protein I [Homo sapiens]
Length = 272
Score = 355 bits (912), Expect = 2e-98
Identities = 172/241 (71%), Positives = 195/241 (80%), Gaps = 5/241 (2%)
Query: 51 KAGSPPSASAPAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQAC 110
+A SP + +AP S SR S+ PS+QDICRICHCEGD+ESPLITPC CTG+L FVHQ+C
Sbjct: 37 QASSPTTGTAPR---SQSRLSVCPSTQDICRICHCEGDEESPLITPCRCTGTLRFVHQSC 93
Query: 111 LQQWIKSSDTRCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVV 170
L QWIKSSDTRCCELCKY+FIMETKLKPLRKWEKLQMT+SERRKI CSVTFHVIAITCVV
Sbjct: 94 LHQWIKSSDTRCCELCKYDFIMETKLKPLRKWEKLQMTTSERRKIFCSVTFHVIAITCVV 153
Query: 171 WSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLK 230
WSLYVLIDRTAEEIKQG G+LEWPFWTKLVVVAIGFTGGL+FMYVQCKVYVQLW+RLK
Sbjct: 154 WSLYVLIDRTAEEIKQGNDNGVLEWPFWTKLVVVAIGFTGGLVFMYVQCKVYVQLWRRLK 213
Query: 231 AYNRVIYVQNCPETSKKNIFEKSPLTEPNFENKHGYGICHSDTNSSCCTEPEDTGAEIIH 290
AYNRVI+VQNCP+T+KK EK+ N + K + T ++ E E++
Sbjct: 214 AYNRVIFVQNCPDTAKK--LEKNFSCNVNTDIKDAVVVPVPQTGANSLPSAEGGPPEVVS 271
Query: 291 V 291
V
Sbjct: 272 V 272
>gi|53729332 membrane-associated ring finger (C3HC4) 2 isoform 1
[Homo sapiens]
Length = 246
Score = 90.5 bits (223), Expect = 2e-18
Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 64 VSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCC 123
+S+ R TPS CRICH EG + L++PC CTG+L VH++CL++W+ SS+T C
Sbjct: 48 LSTVIRALDTPSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYC 106
Query: 124 ELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEE 183
ELC EF +E + +PL +W K +E+R + C + + S ++ + +
Sbjct: 107 ELCHTEFAVEKRPRPLTEWLKDPGPRTEKRTLCCDMVCFLFITPLAAISGWLCLRGAQDH 166
Query: 184 IK---QGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVI 236
++ Q +A G++ + +A+ FT +L+ V + + QL+ + N+ +
Sbjct: 167 LRLHSQLEAVGLI-------ALTIAL-FTIYVLWTLVSFRYHCQLYSEWRKTNQKV 214
>gi|53729330 membrane-associated ring finger (C3HC4) 2 isoform 1
[Homo sapiens]
Length = 246
Score = 90.5 bits (223), Expect = 2e-18
Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 64 VSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCC 123
+S+ R TPS CRICH EG + L++PC CTG+L VH++CL++W+ SS+T C
Sbjct: 48 LSTVIRALDTPSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYC 106
Query: 124 ELCKYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEE 183
ELC EF +E + +PL +W K +E+R + C + + S ++ + +
Sbjct: 107 ELCHTEFAVEKRPRPLTEWLKDPGPRTEKRTLCCDMVCFLFITPLAAISGWLCLRGAQDH 166
Query: 184 IK---QGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVI 236
++ Q +A G++ + +A+ FT +L+ V + + QL+ + N+ +
Sbjct: 167 LRLHSQLEAVGLI-------ALTIAL-FTIYVLWTLVSFRYHCQLYSEWRKTNQKV 214
>gi|30425370 membrane-associated ring finger (C3HC4) 3 [Homo
sapiens]
Length = 253
Score = 82.4 bits (202), Expect = 4e-16
Identities = 38/95 (40%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Query: 64 VSSFSRTSITPS---SQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDT 120
+S+ RT T S + +CRICH EG + L++PC CTG+L +H++CL+ W+ SS+T
Sbjct: 52 LSTVVRTLATQSPFNDRPMCRICH-EGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNT 110
Query: 121 RCCELCKYEFIMETKLKPLRKWEKLQMTSSERRKI 155
CELC + F +E K +PL +W + E+R +
Sbjct: 111 SYCELCHFRFAVERKPRPLVEWLRNPGPQHEKRTL 145
>gi|33589846 membrane-associated ring finger (C3HC4) 6 [Homo
sapiens]
Length = 910
Score = 78.2 bits (191), Expect = 8e-15
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 75 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130
+ +DICR+C EG E PL PC CTGS+ F+HQ CL QW+K S CELCK+ F
Sbjct: 4 AEEDICRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF 59
>gi|53729334 membrane-associated ring finger (C3HC4) 2 isoform 2
[Homo sapiens]
Length = 176
Score = 78.2 bits (191), Expect = 8e-15
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Query: 64 VSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCC 123
+S+ R TPS CRICH EG + L++PC CTG+L VH++CL++W+ SS+T C
Sbjct: 48 LSTVIRALDTPSDGPFCRICH-EGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYC 106
Query: 124 ELCKYEFIMETKLKPL 139
ELC EF +E + +PL
Sbjct: 107 ELCHTEFAVEKRPRPL 122
>gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo
sapiens]
Length = 402
Score = 73.2 bits (178), Expect = 3e-13
Identities = 32/99 (32%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 77 QDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF-IMETK 135
Q IC+IC +G ++ L+ PC C GS+ + HQ CL +WI + CELC Y + ++ K
Sbjct: 167 QPICKICF-QGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELCCYRYHVIAIK 225
Query: 136 LKPLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLY 174
+K +W+ + +T E+ +++ + + I V W L+
Sbjct: 226 MKQPCQWQSISITLVEKVQMIAVILGSLFLIASVTWLLW 264
>gi|57977325 membrane-associated ring finger (C3HC4) 4 [Homo
sapiens]
Length = 410
Score = 72.0 bits (175), Expect = 6e-13
Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 9/210 (4%)
Query: 79 ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF-IMETKLK 137
+CRIC +G ++ L++PC C GS+ HQ CL +WI CELC Y++ ++ K
Sbjct: 162 LCRICF-QGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELCYYKYHVIAISTK 220
Query: 138 PLRKWEKLQMTSSERRKIMCSVTFHVIAITCVVWSLYVLIDRTAEEIKQGQATGILEWPF 197
+W+ + +T E+ ++ ++ + I + W ++ +A +Q I +
Sbjct: 221 NPLQWQAISLTVIEKVQVAAAILGSLFLIASISWLIWSTFSPSARWQRQDLLFQIC-YGM 279
Query: 198 WTKLVVVAIGFTGGLLFMYVQCKVYVQLWKRLKAYNRVIYVQNCPETSKKNIFEKSPLTE 257
+ + VV IG L ++ VY +++KR +A N+ V N +T + T
Sbjct: 280 YGFMDVVCIG-----LIIHEGPSVY-RIFKRWQAVNQQWKVLNYDKTKDLEDQKAGGRTN 333
Query: 258 PNFENKHGYGICHSDTNSSCCTEPEDTGAE 287
P + I S+ ++ PE A+
Sbjct: 334 PRTSSSTQANIPSSEEETAGTPAPEQGPAQ 363
>gi|40255016 membrane-associated RING-CH protein IX [Homo sapiens]
Length = 346
Score = 71.6 bits (174), Expect = 7e-13
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 16/197 (8%)
Query: 55 PPSASAPAPVSSFSRTSITPSSQD-----ICRICHCEGDDESPLITPCHCTGSLHFVHQA 109
PP A P + S++ S CRIC +G ++ L++PC C GS+ HQ
Sbjct: 80 PPPAPPLPPPGALDALSLSSSLDSGLRTPQCRICF-QGPEQGELLSPCRCDGSVRCTHQP 138
Query: 110 CLQQWIKSSDTRCCELC--KYEFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAIT 167
CL +WI + CELC KY+ + + PL +W+ + +T E+ +I V + +
Sbjct: 139 CLIRWISERGSWSCELCYFKYQVLAISTKNPL-QWQAISLTVIEKVQIAAIVLGSLFLVA 197
Query: 168 CVVWSLYVLIDRTAEEIKQGQATGILEWPFWTKLVVVAIGFTGGLLFMYVQCKVYVQLWK 227
+ W ++ + +A+ +Q I + + + VV IG L ++ VY +++K
Sbjct: 198 SISWLIWSSLSPSAKWQRQDLLFQIC-YGMYGFMDVVCIG-----LIIHEGSSVY-RIFK 250
Query: 228 RLKAYNRVIYVQNCPET 244
R +A N+ V N +T
Sbjct: 251 RWQAVNQQWKVLNYDKT 267
>gi|154937342 ring finger protein 190 [Homo sapiens]
Length = 808
Score = 61.6 bits (148), Expect = 8e-10
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 78 DICRICHCEGDDES-PLITPCHCTGSLHFVHQACLQQWIKSSDT--------RCCELCKY 128
D+CRIC G S PL+ PC C GSL FVHQ CL++W+K T + CE+CK
Sbjct: 657 DLCRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQ 716
Query: 129 EFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAI 166
+++ + ++ + S + ++M S + V+ +
Sbjct: 717 GLLVDLGDFNMIEFYQKHQQSQAQNELMNSGLYLVLLL 754
>gi|154937340 ring finger protein 190 [Homo sapiens]
Length = 808
Score = 61.6 bits (148), Expect = 8e-10
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 78 DICRICHCEGDDES-PLITPCHCTGSLHFVHQACLQQWIKSSDT--------RCCELCKY 128
D+CRIC G S PL+ PC C GSL FVHQ CL++W+K T + CE+CK
Sbjct: 657 DLCRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQ 716
Query: 129 EFIMETKLKPLRKWEKLQMTSSERRKIMCSVTFHVIAI 166
+++ + ++ + S + ++M S + V+ +
Sbjct: 717 GLLVDLGDFNMIEFYQKHQQSQAQNELMNSGLYLVLLL 754
>gi|12383066 axotrophin [Homo sapiens]
Length = 704
Score = 53.1 bits (126), Expect = 3e-07
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 9/59 (15%)
Query: 78 DICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKS--------SDTRCCELCK 127
D+CRIC S L I PC CTGSL +VHQ C+++W+++ CELCK
Sbjct: 550 DLCRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCK 608
>gi|8923415 membrane-associated ring finger (C3HC4) 5 [Homo sapiens]
Length = 278
Score = 45.4 bits (106), Expect = 6e-05
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 80 CRICHCEGDDE--SPLITPCHCTGSLHFVHQACLQQWI------KSSDTRCCELCKYEF- 130
C +C +D+ + + PC C GS +VHQACLQ+W+ S+ C C E+
Sbjct: 14 CWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCNAEYL 73
Query: 131 IMETKLKPL 139
I+ KL P+
Sbjct: 74 IVFPKLGPV 82
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 44.7 bits (104), Expect = 1e-04
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 56 PSASAPAPVSSFSRTSITPSSQDI-CRICHCEGDDESPLIT-PCHCTGSLHFVHQACLQQ 113
P +A V + RT I S ++ C +C E ++E I PCH H H +C+
Sbjct: 51 PPPAAKTVVENLPRTVIRGSQAELKCPVCLLEFEEEETAIEMPCH-----HLFHSSCILP 105
Query: 114 WIKSSDTRCCELCKYE 129
W+ S T C LC+YE
Sbjct: 106 WL--SKTNSCPLCRYE 119
>gi|21389515 ring finger protein 145 [Homo sapiens]
Length = 691
Score = 42.0 bits (97), Expect = 6e-04
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 78 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLK 137
DIC IC+ D +S +ITPC HF H CL++W+ +T C LC ++L
Sbjct: 563 DICAICY--QDMKSAVITPCS-----HFFHAGCLKKWLYVQET--CPLCHCHLKNSSQLP 613
Query: 138 PLRKWEKLQMTSSERRKIM 156
L LQ + + +M
Sbjct: 614 GLGTEPVLQPHAGAEQNVM 632
>gi|21314654 ring finger protein 139 [Homo sapiens]
Length = 664
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Query: 78 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLK 137
D+C IC+ E S ITPC+ H+ H CL++W+ DT C +C + +E +K
Sbjct: 545 DVCAICYHEFTT-SARITPCN-----HYFHALCLRKWLYIQDT--CPMCHQKVYIEDDIK 596
>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
Length = 708
Score = 38.1 bits (87), Expect = 0.009
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 28 EKEREEQNEKTLGHFMSHSSNISKAGSPPSASA----PAPVSSFSRTSITPSSQDICRIC 83
E+ + E L H S + ++ A P S + P + T+I + C IC
Sbjct: 580 EERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAI--GQEQCCPIC 637
Query: 84 HCEG-DDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130
E D+ PCH HF H+ C+ W++ S T C +C+ F
Sbjct: 638 CSEYIKDDIATELPCH-----HFFHKPCVSIWLQKSGT--CPVCRRHF 678
>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 37.0 bits (84), Expect = 0.020
Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 17 ISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASAPAPVSSFSRTSITP-- 74
++ + + K+K ++++T + S GSP AP+P + + P
Sbjct: 1890 VTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDVPVR 1949
Query: 75 --SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIM 132
C ICH ++ + C H H+ C +QW+K C C+ ++
Sbjct: 1950 IALGASSCEICHEVFKSKNVRVLKCG-----HKYHKGCFKQWLKGQS--ACPACQGRDLL 2002
Query: 133 ETKLKPLRKW 142
+ R W
Sbjct: 2003 TEESPSGRGW 2012
>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
Length = 2025
Score = 37.0 bits (84), Expect = 0.020
Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 17 ISARVYRSKTKEKEREEQNEKTLGHFMSHSSNISKAGSPPSASAPAPVSSFSRTSITP-- 74
++ + + K+K ++++T + S GSP AP+P + + P
Sbjct: 1890 VTEHILDEQKKKKPNPGKDKRTYEPSSATPVTRSSQGSPSVVVAPSPKTKGQKAEDVPVR 1949
Query: 75 --SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIM 132
C ICH ++ + C H H+ C +QW+K C C+ ++
Sbjct: 1950 IALGASSCEICHEVFKSKNVRVLKCG-----HKYHKGCFKQWLKGQS--ACPACQGRDLL 2002
Query: 133 ETKLKPLRKW 142
+ R W
Sbjct: 2003 TEESPSGRGW 2012
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 35.8 bits (81), Expect = 0.046
Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 14/96 (14%)
Query: 44 SHSSNISKAGSPP-------SASAPAPVSSFSRTSITPSSQDICRICHCEGDDESPLITP 96
SHS + A PP ++ PA S ++ C ICH E+ + P
Sbjct: 1105 SHSPSQPDAAQPPKPAWRPLTSQGPATWEGASNPDEEEEEEEPCVICHENLSPENLSVLP 1164
Query: 97 CHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIM 132
C H H C++ W+ T C C+ ++
Sbjct: 1165 C-----AHKFHAQCIRPWLMQQGT--CPTCRLHVLL 1193
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 33.9 bits (76), Expect = 0.17
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 78 DICRICHCEGDDESPL-ITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCK 127
D+C IC E ++ L I PC H H C+ W + R C +CK
Sbjct: 307 DLCAICLDEYEEGDQLKILPCS-----HTYHCKCIDPWFSQAPRRSCPVCK 352
>gi|7657522 ring finger protein 7 isoform 1 [Homo sapiens]
Length = 113
Score = 33.5 bits (75), Expect = 0.23
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 78 DICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIME 133
D C C E E ++ C H H C+ W+K ++ C LC+ +++++
Sbjct: 59 DACLRCQAENKQEDCVVVWGECN---HSFHNCCMSLWVKQNNR--CPLCQQDWVVQ 109
>gi|40807469 TRAF interacting protein [Homo sapiens]
Length = 469
Score = 33.1 bits (74), Expect = 0.29
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 79 ICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLKP 138
+C IC + D S + HC H H CL QW +++ +R C C+ + T +
Sbjct: 6 LCTICS-DFFDHSRDVAAIHCG---HTFHLQCLIQWFETAPSRTCPQCRIQVGKRTIINK 61
Query: 139 L 139
L
Sbjct: 62 L 62
>gi|21539663 praja 1 isoform c [Homo sapiens]
Length = 455
Score = 33.1 bits (74), Expect = 0.29
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 28 EKEREEQNEKTLGHFMSHSSNISKAGSPPSASA--PAPVSSFSRTSITPSSQDICRIC-- 83
E+ + E L H S + ++ A P S + P + + C IC
Sbjct: 353 EERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCS 412
Query: 84 -HCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130
+ +G+ + L PCH H+ H+ C+ W++ S T C +C+ F
Sbjct: 413 EYVKGEVATEL--PCH-----HYFHKPCVSIWLQKSGT--CPVCRCMF 451
>gi|74048537 praja 1 isoform b [Homo sapiens]
Length = 588
Score = 33.1 bits (74), Expect = 0.29
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 28 EKEREEQNEKTLGHFMSHSSNISKAGSPPSASA--PAPVSSFSRTSITPSSQDICRIC-- 83
E+ + E L H S + ++ A P S + P + + C IC
Sbjct: 486 EERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCS 545
Query: 84 -HCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130
+ +G+ + L PCH H+ H+ C+ W++ S T C +C+ F
Sbjct: 546 EYVKGEVATEL--PCH-----HYFHKPCVSIWLQKSGT--CPVCRCMF 584
>gi|41281725 praja 1 isoform a [Homo sapiens]
Length = 643
Score = 33.1 bits (74), Expect = 0.29
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 14/108 (12%)
Query: 28 EKEREEQNEKTLGHFMSHSSNISKAGSPPSASA--PAPVSSFSRTSITPSSQDICRIC-- 83
E+ + E L H S + ++ A P S + P + + C IC
Sbjct: 541 EERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCS 600
Query: 84 -HCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEF 130
+ +G+ + L PCH H+ H+ C+ W++ S T C +C+ F
Sbjct: 601 EYVKGEVATEL--PCH-----HYFHKPCVSIWLQKSGT--CPVCRCMF 639
>gi|13569903 ring finger protein 32 [Homo sapiens]
Length = 362
Score = 33.1 bits (74), Expect = 0.29
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
Query: 55 PPSASAPAPVSSFSRTSITPSSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQW 114
PP S+ R+ + S C IC E + ++ C H H+ACLQ +
Sbjct: 102 PPPLSSDEWEKVKQRSLLQGDSVQPCPICKEEFELRPQVLLSCS-----HVFHKACLQAF 156
Query: 115 IKSSDTRCCELCK 127
K ++ + C LC+
Sbjct: 157 EKFTNKKTCPLCR 169
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.131 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,172,121
Number of Sequences: 37866
Number of extensions: 565777
Number of successful extensions: 2836
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 2744
Number of HSP's gapped (non-prelim): 136
length of query: 291
length of database: 18,247,518
effective HSP length: 101
effective length of query: 190
effective length of database: 14,423,052
effective search space: 2740379880
effective search space used: 2740379880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.