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Search of human proteins with 4885123
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885123 CD80 antigen precursor [Homo sapiens]
(288 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885123 CD80 antigen precursor [Homo sapiens] 596 e-171
gi|91208433 CD86 antigen isoform 2 precursor [Homo sapiens] 69 6e-12
gi|91208430 CD86 antigen isoform 1 [Homo sapiens] 69 6e-12
gi|27477039 inducible T-cell co-stimulator ligand [Homo sapiens] 60 3e-09
gi|7661534 CD274 molecule [Homo sapiens] 57 2e-08
gi|13376852 CD276 antigen isoform b [Homo sapiens] 53 3e-07
gi|67188443 CD276 antigen isoform a [Homo sapiens] 53 4e-07
gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens] 52 8e-07
gi|68163411 activated leukocyte cell adhesion molecule [Homo sap... 49 7e-06
gi|9624969 butyrophilin-like 2 [Homo sapiens] 48 1e-05
gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens] 47 2e-05
gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens] 47 2e-05
gi|21361905 junctional adhesion molecule 3 precursor [Homo sapiens] 46 4e-05
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 45 6e-05
gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens] 45 1e-04
gi|38454322 adhesion molecule with Ig-like domain 3 [Homo sapiens] 44 2e-04
gi|94538339 signal-regulatory protein gamma isoform 3 precursor ... 43 4e-04
gi|94538335 signal-regulatory protein gamma isoform 1 precursor ... 43 4e-04
gi|144953876 signal-regulatory protein beta 1 isoform 1 precurso... 42 6e-04
gi|18426911 signal-regulatory protein alpha precursor [Homo sapi... 42 6e-04
gi|91105767 signal-regulatory protein alpha precursor [Homo sapi... 42 6e-04
gi|91105764 signal-regulatory protein alpha precursor [Homo sapi... 42 6e-04
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 42 6e-04
gi|31543153 immunoglobin superfamily, member 21 [Homo sapiens] 40 0.002
gi|118572606 hemicentin 1 [Homo sapiens] 40 0.002
gi|190014605 programmed cell death 1 ligand 2 [Homo sapiens] 40 0.002
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens] 40 0.003
gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens] 39 0.004
gi|99028881 V-set domain containing T cell activation inhibitor ... 39 0.005
gi|71274107 melanoma cell adhesion molecule [Homo sapiens] 39 0.007
>gi|4885123 CD80 antigen precursor [Homo sapiens]
Length = 288
Score = 596 bits (1536), Expect = e-171
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 1 MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEELA 60
MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEELA
Sbjct: 1 MGHTRRQGTSPSKCPYLNFFQLLVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEELA 60
Query: 61 QTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLK 120
QTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLK
Sbjct: 61 QTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLK 120
Query: 121 YEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGE 180
YEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGE
Sbjct: 121 YEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGE 180
Query: 181 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEHFP 240
ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEHFP
Sbjct: 181 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEHFP 240
Query: 241 DNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNERLRRESVRPV 288
DNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNERLRRESVRPV
Sbjct: 241 DNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRRNERLRRESVRPV 288
>gi|91208433 CD86 antigen isoform 2 precursor [Homo sapiens]
Length = 323
Score = 68.6 bits (166), Expect = 6e-12
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 36/245 (14%)
Query: 44 EVATLSCGH-NVSVEELAQTRIYWQKEKKMVLTMMSGDM----NIWPEYKNRTIFDITNN 98
E A L C N + L++ ++WQ ++ +VL + ++ +Y RT FD +++
Sbjct: 28 ETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFD-SDS 86
Query: 99 LSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIR 158
++ + L+ D+G Y+C++ + R H LSV A+F P I +P SNI
Sbjct: 87 WTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEI----VPISNIT 142
Query: 159 -----RIICSTSGGFPEPHLSWLENGEELNAINTTV--------SQDPETELYAVSSKLD 205
+ CS+ G+PEP + L N+T+ SQD TELY VS L
Sbjct: 143 ENVYINLTCSSIHGYPEPK----KMSVLLRTKNSTIEYDGVMQKSQDNVTELYDVSISLS 198
Query: 206 F---NMTTNHSFMCLIKYGHLR-VNQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVIC 261
++T+N + C+++ R ++ F+ + PD++ W + +V +IC
Sbjct: 199 VSFPDVTSNMTIFCILETDKTRLLSSPFSIELEDPQPPPDHI--PW---ITAVLPTVIIC 253
Query: 262 CLTYC 266
+ +C
Sbjct: 254 VMVFC 258
>gi|91208430 CD86 antigen isoform 1 [Homo sapiens]
Length = 329
Score = 68.6 bits (166), Expect = 6e-12
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 36/245 (14%)
Query: 44 EVATLSCGH-NVSVEELAQTRIYWQKEKKMVLTMMSGDM----NIWPEYKNRTIFDITNN 98
E A L C N + L++ ++WQ ++ +VL + ++ +Y RT FD +++
Sbjct: 34 ETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFD-SDS 92
Query: 99 LSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIR 158
++ + L+ D+G Y+C++ + R H LSV A+F P I +P SNI
Sbjct: 93 WTLRLHNLQIKDKGLYQCIIHHKKPTGMIRIHQMNSELSVLANFSQPEI----VPISNIT 148
Query: 159 -----RIICSTSGGFPEPHLSWLENGEELNAINTTV--------SQDPETELYAVSSKLD 205
+ CS+ G+PEP + L N+T+ SQD TELY VS L
Sbjct: 149 ENVYINLTCSSIHGYPEPK----KMSVLLRTKNSTIEYDGVMQKSQDNVTELYDVSISLS 204
Query: 206 F---NMTTNHSFMCLIKYGHLR-VNQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVIC 261
++T+N + C+++ R ++ F+ + PD++ W + +V +IC
Sbjct: 205 VSFPDVTSNMTIFCILETDKTRLLSSPFSIELEDPQPPPDHI--PW---ITAVLPTVIIC 259
Query: 262 CLTYC 266
+ +C
Sbjct: 260 VMVFC 264
>gi|27477039 inducible T-cell co-stimulator ligand [Homo sapiens]
Length = 302
Score = 59.7 bits (143), Expect = 3e-09
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 58 ELAQTRIYWQ-KEKKMVLT----MMSGDMNIWPEYKNRTIFD----ITNNLSIVILALRP 108
+L +YWQ E K V+T S N+ Y+NR + + + S+ + + P
Sbjct: 46 DLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAGMLRGDFSLRLFNVTP 105
Query: 109 SDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGF 168
DE + C+VL + F+ EVTL V A+F P +S P+ + C++ G+
Sbjct: 106 QDEQKFHCLVLS-QSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGY 164
Query: 169 PEPHLSWLENGEELNAINTTVSQDP----ETELYAVSSKLDFNMTTNHSFMCLIKYGHLR 224
P P++ W+ N + + ++ + D LY V S L T + + C I+ L+
Sbjct: 165 PRPNVYWI-NKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQ 223
Query: 225 VNQTFNWNT 233
N T T
Sbjct: 224 QNLTVGSQT 232
>gi|7661534 CD274 molecule [Homo sapiens]
Length = 290
Score = 56.6 bits (135), Expect = 2e-08
Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 50/258 (19%)
Query: 43 KEVATLSCGHNVSVE---------ELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKN---- 89
K++ + G N+++E +LA +YW+ E K ++ + G+ ++ ++ +
Sbjct: 25 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQR 84
Query: 90 -RTIFDITN--NLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPS 146
R + D + N ++ I ++ D G Y C++ Y +KR ++VK + P
Sbjct: 85 ARLLKDQLSLGNAALQITDVKLQDAGVYRCMI-SYGGADYKR-------ITVKVNAPYNK 136
Query: 147 ISDFEI---PTSNIRRIICSTSGGFPEPHLSWLENGEE-LNAINTTVSQDPETELYAVSS 202
I+ + P ++ + C G +P+ + W + + L+ TT + E +L+ V+S
Sbjct: 137 INQRILVVDPVTSEHELTCQAEG-YPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTS 195
Query: 203 KLDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEHFPDNLLPSWAI-------TLISVN 255
L N TTN F C TF ++ H + ++P + T + +
Sbjct: 196 TLRINTTTNEIFYC-----------TFRRLDPEENHTAELVIPELPLAHPPNERTHLVIL 244
Query: 256 GIFVIC---CLTYCFAPR 270
G ++C LT+ F R
Sbjct: 245 GAILLCLGVALTFIFRLR 262
>gi|13376852 CD276 antigen isoform b [Homo sapiens]
Length = 316
Score = 53.1 bits (126), Expect = 3e-07
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 46 ATLSCGHNVSVE-ELAQTRIYWQ-KEKKMVLTMMSGDMNIWPEYKNRTIF--DIT--NNL 99
ATL C + LAQ + WQ + K ++ + + Y NRT D+ N
Sbjct: 46 ATLCCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFAEGQDQGSAYANRTALFPDLLAQGNA 105
Query: 100 SIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSIS---DFEIPTSN 156
S+ + +R +DEG++ C V + + A V+L V A + PS++ + ++ +
Sbjct: 106 SLRLQRVRVADEGSFTCFV------SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGD 159
Query: 157 IRRIICSTSGGFPEPHLSWLE-NGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFM 215
I CS+ G+PE + W + G L TT E L+ V S L + N ++
Sbjct: 160 TVTITCSSYRGYPEAEVFWQDGQGVPLTGNVTTSQMANEQGLFDVHSVLRVVLGANGTYS 219
Query: 216 CLIKYGHLRVNQTFNWNTTKQE-HFPDNLLPSWAITLISVNGIFVICCLTY 265
CL++ L+ + + T Q FP L W +SV I ++ L +
Sbjct: 220 CLVRNPVLQQDAHGSVTITGQPMTFPPEAL--WVTVGLSVCLIALLVALAF 268
>gi|67188443 CD276 antigen isoform a [Homo sapiens]
Length = 534
Score = 52.8 bits (125), Expect = 4e-07
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 19/231 (8%)
Query: 46 ATLSCGHNVSVE-ELAQTRIYWQ-KEKKMVLTMMSGDMNIWPEYKNRTIF--DIT--NNL 99
ATL C + LAQ + WQ + K ++ + + Y NRT D+ N
Sbjct: 264 ATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYANRTALFPDLLAQGNA 323
Query: 100 SIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSIS---DFEIPTSN 156
S+ + +R +DEG++ C V + + A V+L V A + PS++ + ++ +
Sbjct: 324 SLRLQRVRVADEGSFTCFV------SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGD 377
Query: 157 IRRIICSTSGGFPEPHLSWLE-NGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFM 215
I CS+ G+PE + W + G L TT E L+ V S L + N ++
Sbjct: 378 TVTITCSSYRGYPEAEVFWQDGQGVPLTGNVTTSQMANEQGLFDVHSVLRVVLGANGTYS 437
Query: 216 CLIKYGHLRVNQTFNWNTTKQE-HFPDNLLPSWAITLISVNGIFVICCLTY 265
CL++ L+ + + T Q FP L W +SV I ++ L +
Sbjct: 438 CLVRNPVLQQDAHGSVTITGQPMTFPPEAL--WVTVGLSVCLIALLVALAF 486
Score = 51.6 bits (122), Expect = 8e-07
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 16/184 (8%)
Query: 46 ATLSCGHNVSVE-ELAQTRIYWQ-KEKKMVLTMMSGDMNIWPEYKNRTIF--DIT--NNL 99
ATL C + LAQ + WQ + K ++ + + Y NRT D+ N
Sbjct: 46 ATLCCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFAEGQDQGSAYANRTALFPDLLAQGNA 105
Query: 100 SIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSIS---DFEIPTSN 156
S+ + +R +DEG++ C V + + A V+L V A + PS++ + ++ +
Sbjct: 106 SLRLQRVRVADEGSFTCFV------SIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGD 159
Query: 157 IRRIICSTSGGFPEPHLSWLE-NGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFM 215
I CS+ G+PE + W + G L TT E L+ V S L + N ++
Sbjct: 160 TVTITCSSYQGYPEAEVFWQDGQGVPLTGNVTTSQMANEQGLFDVHSILRVVLGANGTYS 219
Query: 216 CLIK 219
CL++
Sbjct: 220 CLVR 223
>gi|54607031 immunoglobulin superfamily, member 4D [Homo sapiens]
Length = 437
Score = 51.6 bits (122), Expect = 8e-07
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 15/186 (8%)
Query: 46 ATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILA 105
A L+C V++ T + W + T+ D + + + + LSI +
Sbjct: 42 AILTC----RVDQNDNTSLQWSNPAQQ--TLYFDDKKALRDNRIELVRASWHELSISVSD 95
Query: 106 LRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPT--SNIRRIICS 163
+ SDEG Y C + K L+V P IS F P ++ ++ C
Sbjct: 96 VSLSDEGQYTCSLFTMPVKTSK------AYLTVLGVPEKPQISGFSSPVMEGDLMQLTCK 149
Query: 164 TSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLI-KYGH 222
TSG P + W +N +E+ + +D + + VSS LDF + + + +I + H
Sbjct: 150 TSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDH 209
Query: 223 LRVNQT 228
+N T
Sbjct: 210 ESLNAT 215
>gi|68163411 activated leukocyte cell adhesion molecule [Homo
sapiens]
Length = 583
Score = 48.5 bits (114), Expect = 7e-06
Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 25/151 (16%)
Query: 85 PEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPT 144
PEYK+R +++ N ++ I R SDE + C+++ E + F+ + +V F
Sbjct: 84 PEYKDR--LNLSENYTLSISNARISDEKRFVCMLVT-EDNVFEAPTIVKV-------FKQ 133
Query: 145 PSISDFE-----IPTSNIRRI-ICSTSGGFPEPHLSWLENGEELNAINTTV------SQD 192
PS + + T ++++ C + +P+ +++W NG+ L+ + V D
Sbjct: 134 PSKPEIVSKALFLETEQLKKLGDCISEDSYPDGNITWYRNGKVLHPLEGAVVIIFKKEMD 193
Query: 193 PETELYAVSSKLDFNMT---TNHSFMCLIKY 220
P T+LY ++S L++ T F C + Y
Sbjct: 194 PVTQLYTMTSTLEYKTTKADIQMPFTCSVTY 224
Score = 30.8 bits (68), Expect = 1.4
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Query: 88 KNRTIFDITNNLSI----VILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFP 143
+N T+ + +N+ + +L D G Y C E + K+ + + K
Sbjct: 360 RNATVVWMKDNIRLRSSPSFSSLHYQDAGNYVCETALQEVEGLKKRESLTLIVEGKPQIK 419
Query: 144 TPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTT 188
+D P+ + IIC G FP+P + W G + IN T
Sbjct: 420 MTKKTD---PSGLSKTIICHVEG-FPKPAIQWTITGSG-SVINQT 459
>gi|9624969 butyrophilin-like 2 [Homo sapiens]
Length = 455
Score = 47.8 bits (112), Expect = 1e-05
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 86 EYKNRTIFDIT----NNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKAD 141
EY+ RT+ L++ IL+ RPSD+G Y C+ +EKD +E A + L V +
Sbjct: 307 EYRGRTVLVSDAIDEGRLTLQILSARPSDDGQYRCL---FEKDDVYQE--ASLDLKVVSL 361
Query: 142 FPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSW 175
+P I+ E + +CS+ G FP+PH+ W
Sbjct: 362 GSSPLIT-VEGQEDGEMQPMCSSDGWFPQPHVPW 394
Score = 44.7 bits (104), Expect = 1e-04
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 10/158 (6%)
Query: 62 TRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKY 121
T ++ ++ V M + W E+ I N+++ I ++PSD G Y C +
Sbjct: 72 TPVFVHRDGVEVTEMQMEEYRGWVEWIENGI--AKGNVALKIHNIQPSDNGQYWC---HF 126
Query: 122 EKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLE-NGE 180
+ + E + L V PSI E P + +++C+ G FPEP + W + GE
Sbjct: 127 QDGNYCGE--TSLLLKVAGLGSAPSIH-MEGPGESGVQLVCTARGWFPEPQVYWEDIRGE 183
Query: 181 ELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLI 218
+L A++ QD + YA ++ + N + S CL+
Sbjct: 184 KLLAVSEHRIQDKDGLFYAEATLVVRNASA-ESVSCLV 220
>gi|187608363 cell adhesion molecule 3 isoform 2 [Homo sapiens]
Length = 398
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/174 (20%), Positives = 75/174 (43%), Gaps = 13/174 (7%)
Query: 56 VEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYE 115
V++ + + W + T+ G+ + + + + + LSI I + +DEG Y
Sbjct: 52 VKDHEDSSLQWSNPAQQ--TLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYT 109
Query: 116 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE--IPTSNIRRIICSTSGGFPEPHL 173
C + A+ ++V P I+ ++ + + + C +SG P L
Sbjct: 110 CSIFTMPV------RTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAARL 163
Query: 174 SWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNH---SFMCLIKYGHLR 224
+W + +EL+ T + +DP + + VSS + F +T S +C + + L+
Sbjct: 164 TWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLK 217
>gi|11056046 cell adhesion molecule 3 isoform 1 [Homo sapiens]
Length = 432
Score = 47.0 bits (110), Expect = 2e-05
Identities = 36/174 (20%), Positives = 75/174 (43%), Gaps = 13/174 (7%)
Query: 56 VEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYE 115
V++ + + W + T+ G+ + + + + + LSI I + +DEG Y
Sbjct: 86 VKDHEDSSLQWSNPAQQ--TLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYT 143
Query: 116 CVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE--IPTSNIRRIICSTSGGFPEPHL 173
C + A+ ++V P I+ ++ + + + C +SG P L
Sbjct: 144 CSIFTMPV------RTAKSLVTVLGIPQKPIITGYKSSLREKDTATLNCQSSGSKPAARL 197
Query: 174 SWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNH---SFMCLIKYGHLR 224
+W + +EL+ T + +DP + + VSS + F +T S +C + + L+
Sbjct: 198 TWRKGDQELHGEPTRIQEDPNGKTFTVSSSVTFQVTREDDGASIVCSVNHESLK 251
>gi|21361905 junctional adhesion molecule 3 precursor [Homo sapiens]
Length = 355
Score = 45.8 bits (107), Expect = 4e-05
Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 11/166 (6%)
Query: 18 NFFQLLVLAGLSHFCSGVIHV-----TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKM 72
+FF LL+ G G +++ T V+E ++ ++ + + RI W+K +
Sbjct: 62 DFFLLLLFRGC---LIGAVNLKSSNRTPVVQEFESVELSCIITDSQTSDPRIEWKKIQDE 118
Query: 73 VLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLA 132
T + D I + R +I S+ I + D Y C V+ E +
Sbjct: 119 QTTYVFFDNKIQGDLAGRA--EILGKTSLKIWNVTRRDSALYRCEVVARNDRKEIDEIVI 176
Query: 133 EVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLEN 178
E+T+ VK P + +P + + C S G P PH SW N
Sbjct: 177 ELTVQVKPVTPVCRVPK-AVPVGKMATLHCQESEGHPRPHYSWYRN 221
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 45.4 bits (106), Expect = 6e-05
Identities = 69/266 (25%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 42 VKEVATLSC--GHNVSVEELAQTRIYWQKEKKMVLTMMSG---DMNIWPEYKNRTIFD-- 94
V E A L C N S E L + R + +K VL G + PEY+ R
Sbjct: 42 VGEDAELPCRLSPNASAEHL-ELRWFRKKVSPAVLVHRDGREQEAEQMPEYRGRATLVQD 100
Query: 95 --ITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEI 152
+++ I +R SD+G Y C + +D E L V L V A P IS ++
Sbjct: 101 GIAKGRVALRIRGVRVSDDGEYTCF---FREDGSYEEAL--VHLKVAALGSDPHIS-MQV 154
Query: 153 PTSNIRRIICSTSGGFPEPHLSW-LENGEELNAINTTVSQDPETE-LYAVSSKLDFNMTT 210
+ + C++ G +PEP + W GE+ +T+ S++P+ E L+ V++ + T+
Sbjct: 155 QENGEICLECTSVGWYPEPQVQWRTSKGEKFP--STSESRNPDEEGLFTVAASVIIRDTS 212
Query: 211 NHSFMCLIKYGHLRVNQTFNWNTTKQEHFPDNLLP---SWAI---TLISVNGIFVICCLT 264
+ C I+ N + P + LP W + ++ V G+ I +
Sbjct: 213 AKNVSCYIQ------NLLLGQEKKVEISIPASSLPRLTPWIVAVAVILMVLGLLTIGSIF 266
Query: 265 Y---CFAPRCRERRR----NERLRRE 283
+ + R RERR ERL E
Sbjct: 267 FTWRLYNERPRERRNEFSSKERLLEE 292
>gi|13376115 adipocyte-specific adhesion molecule [Homo sapiens]
Length = 373
Score = 44.7 bits (104), Expect = 1e-04
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 22 LLVLAGLSHFCSGVIHVTKEVKEVA----TLSCGHNVSVEELAQTRIYW-----QKEKKM 72
LL+L L + G + E+K VA TL C H + + E I W + +K+
Sbjct: 3 LLLLLLLVSYYVGTLGTHTEIKRVAEEKVTLPCHHQLGLPEKDTLDIEWLLTDNEGNQKV 62
Query: 73 VLTMMSGDM--NIWPEYKNRTIFD---ITNNLSIVILALRPSDEGTYECVV 118
V+T S + N+ E K R F + + S+ I L+PSDEG Y C V
Sbjct: 63 VITYSSRHVYNNLTEEQKGRVAFASNFLAGDASLQIEPLKPSDEGRYTCKV 113
>gi|38454322 adhesion molecule with Ig-like domain 3 [Homo sapiens]
Length = 504
Score = 43.5 bits (101), Expect = 2e-04
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 159 RIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHS--FMC 216
R+ C+TS P ++W+ +EL + S+D + A S N+ H+ F+C
Sbjct: 297 RLYCNTS--VPAMRIAWVSPQQEL--LRAPGSRDGSIAVLADGSLAIGNVQEQHAGLFVC 352
Query: 217 LIKYGHLRVNQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVICCLTYCFAPRCRERRR 276
L L NQT +N + P+ + T + + ++ L Y FAP CR RR
Sbjct: 353 LATGPRLHHNQTHEYNVSVHFPRPEPEAFNTGFTTLLGCAVGLVLVLLYLFAPPCRCCRR 412
Query: 277 NERLRR 282
R RR
Sbjct: 413 ACRCRR 418
>gi|94538339 signal-regulatory protein gamma isoform 3 precursor
[Homo sapiens]
Length = 276
Score = 42.7 bits (99), Expect = 4e-04
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 91 TIFDIT--NNL--SIVILALRPSDEGTYECVVLKY---EKDAFKREHLAEVTLSVKADFP 143
T+ D+T NN+ SI I ++ P+D GTY CV + E FK E+ L K P
Sbjct: 90 TVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAP 149
Query: 144 TPSISDFEIPTSNIRRIICSTSGGFPEP-HLSWLENGEELNAINTTVSQDPETELYAVSS 202
+ C + G P L W +NG EL+ T V ++ Y++ S
Sbjct: 150 VVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRS 209
>gi|94538335 signal-regulatory protein gamma isoform 1 precursor
[Homo sapiens]
Length = 387
Score = 42.7 bits (99), Expect = 4e-04
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 91 TIFDIT--NNL--SIVILALRPSDEGTYECVVLKY---EKDAFKREHLAEVTLSVKADFP 143
T+ D+T NN+ SI I ++ P+D GTY CV + E FK E+ L K P
Sbjct: 90 TVSDLTKRNNMDFSIRISSITPADVGTYYCVKFRKGSPENVEFKSGPGTEMALGAKPSAP 149
Query: 144 TPSISDFEIPTSNIRRIICSTSGGFPEP-HLSWLENGEELNAINTTVSQDPETELYAVSS 202
+ C + G P L W +NG EL+ T V ++ Y++ S
Sbjct: 150 VVLGPAARTTPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPTGQSVAYSIRS 209
>gi|144953876 signal-regulatory protein beta 1 isoform 1 precursor
[Homo sapiens]
Length = 398
Score = 42.0 bits (97), Expect = 6e-04
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 91 TIFDIT--NNL--SIVILALRPSDEGTYECVVL-KYEKDAFKREHLAEVTLSVKADFPTP 145
T+ ++T NNL SI I + P+D GTY CV K D + + A LSV+A P
Sbjct: 91 TVSELTKRNNLDFSISISNITPADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPSAP 150
Query: 146 SISDFEIPTSNIRRI--ICSTSGGFPEP-HLSWLENGEELNAINTTVSQDPETELYAVSS 202
+S + + + C + G P L W +NG EL+ T V ++ Y++ S
Sbjct: 151 VVSGPAVRATPEHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSIHS 210
>gi|18426911 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 42.0 bits (97), Expect = 6e-04
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 91 TIFDIT--NNL--SIVILALRPSDEGTYECVVLKYEKDA-----FKREHLAEVTLSVKAD 141
T+ D+T NN+ SI I + P+D GTY CV K+ K + FK E+++ K
Sbjct: 92 TVSDLTKRNNMDFSIRIGNITPADAGTYYCV--KFRKGSPDDVEFKSGAGTELSVRAKPS 149
Query: 142 FPTPSISDFEIPTSNIRRIICSTSGGFPEP-HLSWLENGEELNAINTTVSQDPETELYAV 200
P S + C + G P L W +NG EL+ T V E+ Y++
Sbjct: 150 APVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSI 209
Query: 201 SS 202
S
Sbjct: 210 HS 211
>gi|91105767 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 42.0 bits (97), Expect = 6e-04
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 91 TIFDIT--NNL--SIVILALRPSDEGTYECVVLKYEKDA-----FKREHLAEVTLSVKAD 141
T+ D+T NN+ SI I + P+D GTY CV K+ K + FK E+++ K
Sbjct: 92 TVSDLTKRNNMDFSIRIGNITPADAGTYYCV--KFRKGSPDDVEFKSGAGTELSVRAKPS 149
Query: 142 FPTPSISDFEIPTSNIRRIICSTSGGFPEP-HLSWLENGEELNAINTTVSQDPETELYAV 200
P S + C + G P L W +NG EL+ T V E+ Y++
Sbjct: 150 APVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSI 209
Query: 201 SS 202
S
Sbjct: 210 HS 211
>gi|91105764 signal-regulatory protein alpha precursor [Homo
sapiens]
Length = 504
Score = 42.0 bits (97), Expect = 6e-04
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 91 TIFDIT--NNL--SIVILALRPSDEGTYECVVLKYEKDA-----FKREHLAEVTLSVKAD 141
T+ D+T NN+ SI I + P+D GTY CV K+ K + FK E+++ K
Sbjct: 92 TVSDLTKRNNMDFSIRIGNITPADAGTYYCV--KFRKGSPDDVEFKSGAGTELSVRAKPS 149
Query: 142 FPTPSISDFEIPTSNIRRIICSTSGGFPEP-HLSWLENGEELNAINTTVSQDPETELYAV 200
P S + C + G P L W +NG EL+ T V E+ Y++
Sbjct: 150 APVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPVGESVSYSI 209
Query: 201 SS 202
S
Sbjct: 210 HS 211
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 42.0 bits (97), Expect = 6e-04
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 91 TIFDIT--NNL--SIVILALRPSDEGTYECVVLKYEKDA-----FKREHLAEVTLSVKAD 141
T+ D+T NN+ SI I + P+D GTY CV K+ K + FK E+++ K
Sbjct: 91 TVSDLTKRNNMDFSIRISNITPADAGTYYCV--KFRKGSPDHVEFKSGAGTELSVRAKPS 148
Query: 142 FPTPSISDFEIPTSNIRRIICSTSGGFPEP-HLSWLENGEELNAINTTVSQDPETELYAV 200
P S + C + G P L W +NG EL+ T V ++ Y++
Sbjct: 149 APVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPAGDSVSYSI 208
Query: 201 SS 202
S
Sbjct: 209 HS 210
>gi|31543153 immunoglobin superfamily, member 21 [Homo sapiens]
Length = 467
Score = 40.4 bits (93), Expect = 0.002
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 10/118 (8%)
Query: 76 MMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVT 135
M S + + Y+ R D+ ++ + +R SD G YEC V Y++ ++ LA
Sbjct: 78 MFSTNYSHMENYRKRE--DLVYQSTVRLPEVRISDNGPYECHVGIYDRATREKVVLASGN 135
Query: 136 LSVKADFPTPSI----SDFEIPTSNIRR----IICSTSGGFPEPHLSWLENGEELNAI 185
+ + P SI +D P S + ++C SGG P P + + +GE ++A+
Sbjct: 136 IFLNVMAPPTSIEVVAADTPAPFSRYQAQNFTLVCIVSGGKPAPMVYFKRDGEPIDAV 193
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 40.0 bits (92), Expect = 0.002
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 88 KNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSI 147
+N+ + + ++ S+VI++ D TYEC V D + L AD PT
Sbjct: 3848 QNQNSYRLLSSGSLVIISPSVDDTATYECTVTNGAGDDKRTVDLTVQVPPSIADEPT--- 3904
Query: 148 SDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEEL 182
DF + T + +I T+ G P P + W +NG L
Sbjct: 3905 -DFLV-TKHAPAVITCTASGVPFPSIHWTKNGIRL 3937
Score = 38.1 bits (87), Expect = 0.009
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 13/115 (11%)
Query: 108 PSDEGTYECVVLKYEKDAFKREHLAEVTLSVKA-----DFPTPSISDFEIPTSNIRRIIC 162
PSD G Y CV E+TL V+ D P + F+ +N R
Sbjct: 1233 PSDAGIYTCVATN-----IAGTDETEITLHVQEPPTVEDLEPPYNTTFQERVANQRIEFP 1287
Query: 163 STSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCL 217
+ G P+P + WL NG EL +S + L ++S ++ N ++C+
Sbjct: 1288 CPAKGTPKPTIKWLHNGRELTGREPGISILEDGTLLVIASVTPYD---NGEYICV 1339
Score = 38.1 bits (87), Expect = 0.009
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 4/95 (4%)
Query: 95 ITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPT 154
++N + IL + +D G Y CV E A + + + V P + +
Sbjct: 2922 LSNGRILQILNTQITDIGRYVCVA---ENTAGSAKKYFNLNVHVPPSVIGPKSENLTVVV 2978
Query: 155 SNIRRIICSTSGGFPEPHLSWLENGEELNAINTTV 189
+N + C SG FP P LSWL+N + + T+
Sbjct: 2979 NNFISLTCEVSG-FPPPDLSWLKNEQPIKLNTNTL 3012
Score = 33.1 bits (74), Expect = 0.29
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 22/147 (14%)
Query: 38 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITN 97
+ + + TL+C + I W K K + S ++ I ++
Sbjct: 3161 IVETISNPVTLTC----DATGIPPPTIAWLKNHKRIENSDSLEVRI-----------LSG 3205
Query: 98 NLSIVILALRPSDEGTYECVVLKYEKDAFKREHLA-EVTLSVK-ADFPTPSISDFEIPTS 155
+ I + SD G Y C+ E A K L+ +V SV A+ P SD +
Sbjct: 3206 GSKLQIARSQHSDSGNYTCIASNMEGKAQKYYFLSIQVPPSVAGAEIP----SDVSVLLG 3261
Query: 156 NIRRIICSTSGGFPEPHLSWLENGEEL 182
++C+ +G P P + WL++G+ +
Sbjct: 3262 ENVELVCNANG-IPTPLIQWLKDGKPI 3287
Score = 32.3 bits (72), Expect = 0.50
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 95 ITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPT 154
+ N +VI + S+ G Y C+ D K+E EVT+ V + +S+ +
Sbjct: 1784 LLNGRKLVIAQAQVSNTGLYRCMAANTAGD-HKKEF--EVTVHVPPTIKSSGLSERVVVK 1840
Query: 155 SNIRRIICSTSGGFPEPHLSWLENGEELN 183
+ C + G P P ++WL++ + +N
Sbjct: 1841 YKPVALQC-IANGIPNPSITWLKDDQPVN 1868
Score = 31.2 bits (69), Expect = 1.1
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 1/98 (1%)
Query: 82 NIWPEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKAD 141
N P N + ++ I+ + SD G Y C+ + ++ K+ L D
Sbjct: 3001 NEQPIKLNTNTLIVPGGRTLQIIRAKVSDGGEYTCIAINQAGESKKKFSLTVYVPPSIKD 3060
Query: 142 FPTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENG 179
+ S+S + + C S P P ++W +NG
Sbjct: 3061 HDSESLSVVNVREGTSVSLECE-SNAVPPPVITWYKNG 3097
Score = 29.6 bits (65), Expect = 3.2
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 85 PEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSV--KADF 142
P NR I + ++ IL + + G Y CV + K + + K D
Sbjct: 2615 PLESNRNIRILPGGRTLQILNAQEDNAGRYSCVATNEAGEMIKHYEVKVYIPPIINKGDL 2674
Query: 143 PTPSIS--DFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNA 184
P +S + +I +N + C + P LSW ++G+ L +
Sbjct: 2675 WGPGLSPKEVKIKVNNTLTLECE-AYAIPSASLSWYKDGQPLKS 2717
Score = 28.9 bits (63), Expect = 5.5
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 109 SDEGTYECVVLKYEKDAFKREHL-AEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGG 167
SD TY C V A K H+ V ++ + TP + ++ ++ + C +G
Sbjct: 1611 SDSATYTCHVANVAGTAEKSFHVDVYVPPMIEGNLATPL--NKQVVIAHSLTLECKAAGN 1668
Query: 168 FPEPHLSWLENGEELNA 184
P P L+WL++G + A
Sbjct: 1669 -PSPILTWLKDGVPVKA 1684
Score = 28.9 bits (63), Expect = 5.5
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 13/82 (15%)
Query: 109 SDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFE----IPTSNIRRIICST 164
SD G Y+CV A E+ S++ PSIS + +N R+ C
Sbjct: 1984 SDAGIYKCV-------AINSAGATELFYSLQVHV-APSISGSNNMVAVVVNNPVRLECEA 2035
Query: 165 SGGFPEPHLSWLENGEELNAIN 186
G P P L+WL++G +++ +
Sbjct: 2036 RG-IPAPSLTWLKDGSPVSSFS 2056
Score = 28.5 bits (62), Expect = 7.2
Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 3/87 (3%)
Query: 96 TNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTS 155
T+ + + +L D G Y C+ + K H L + + + +
Sbjct: 3486 THGMVLQLLKAETEDSGKYTCIASNEAGEVSK--HFILKVLEPPHINGSEEHEEISVIVN 3543
Query: 156 NIRRIICSTSGGFPEPHLSWLENGEEL 182
N + C SG P P ++W+++G L
Sbjct: 3544 NPLELTCIASG-IPAPKMTWMKDGRPL 3569
Score = 28.5 bits (62), Expect = 7.2
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 89 NRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSIS 148
N + I N + I + +D G Y C+ +R + ++ P PSI+
Sbjct: 3756 NHARYSILENGFLHIQSAHVTDTGRYLCMATNAAGTDRRR-------IDLQVHVP-PSIA 3807
Query: 149 DFEIPTS-----NIRRIICSTSGGFPEPHLSWLENGEELN 183
PT+ N++ + + G P+P ++W +NG LN
Sbjct: 3808 PG--PTNMTVIVNVQTTLACEATGIPKPSINWRKNGHLLN 3845
>gi|190014605 programmed cell death 1 ligand 2 [Homo sapiens]
Length = 273
Score = 40.0 bits (92), Expect = 0.002
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 110 DEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEIPTSNIRRIICSTSGGFP 169
DEG Y+C+++ +K +TL VKA + + ++P ++ + C + G+P
Sbjct: 96 DEGQYQCIIIYGVAWDYK-----YLTLKVKASYRKINTHILKVPETDEVELTCQAT-GYP 149
Query: 170 EPHLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLR 224
+SW NT+ S+ PE LY V+S L +F C+ H+R
Sbjct: 150 LAEVSWPNVSV---PANTSHSRTPE-GLYQVTSVLRLKPPPGRNFSCVFWNTHVR 200
>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
Length = 1349
Score = 39.7 bits (91), Expect = 0.003
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 85 PEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEK--DAFKREHLAEVTLSVKADF 142
PEY R + + S+ + +R D+G YEC VL ++ D F +T++ F
Sbjct: 84 PEYAGRA--SLHDKASLRLEQVRSEDQGWYECKVLMLDQQYDTFHNGSWVHLTINAPPTF 141
Query: 143 PTPSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVS 201
E + C T+ G P+P ++WL+ G L A D + +VS
Sbjct: 142 TETPPQYIEAKEGGSITMTC-TAFGNPKPIVTWLKEGTLLGASGKYQVSDGSLTVTSVS 199
Score = 28.5 bits (62), Expect = 7.2
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 13/95 (13%)
Query: 23 LVLAGLSHFCSGVIHVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMN 82
L++ G S ++T + + A L+C L T YWQ E D+
Sbjct: 223 LLVQGPPFIVSPPENITVNISQDALLTCRAEAYPGNLTYTW-YWQDEN----VYFQNDLK 277
Query: 83 IWPEYKNRTIFDITNNLSIVILALRPSDEGTYECV 117
+ + R + D T ++I ++P D G Y CV
Sbjct: 278 L----RVRILIDGT----LIIFRVKPEDSGKYTCV 304
>gi|121674801 hepatocyte cell adhesion molecule [Homo sapiens]
Length = 416
Score = 39.3 bits (90), Expect = 0.004
Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 20/199 (10%)
Query: 85 PEYKNRTIFDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPT 144
P+Y++R + N S+++ L+ +DEGTYE V + D F E +T+ V P
Sbjct: 93 PDYRDR--IRLFENGSLLLSDLQLADEGTYE-VEISITDDTFTGEKTINLTVDVPISRPQ 149
Query: 145 PSI-SDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDPETELYAVSSK 203
+ S + S + CS G +P +WL++G+ L ++ + P+ ++ ++
Sbjct: 150 VLVASTTVLELSEAFTLNCSHENG-TKPSYTWLKDGKPL-LNDSRMLLSPDQKVLTITRV 207
Query: 204 LDFNMTTNHSFMCLIKYGHLRVNQTFNWNTTKQEHFPDNLLPSWAITLISVNGIFVICCL 263
L M + + C+++ + ++ T S ++S GIF++ L
Sbjct: 208 L---MEDDDLYSCMVE-NPISQGRSLPVKITVYRR-------SSLYIILSTGGIFLLVTL 256
Query: 264 T---YCFAPRCRERRRNER 279
C+ P R++++ E+
Sbjct: 257 VTVCACWKPSKRKQKKLEK 275
>gi|99028881 V-set domain containing T cell activation inhibitor 1
[Homo sapiens]
Length = 282
Score = 38.9 bits (89), Expect = 0.005
Identities = 32/130 (24%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 95 ITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSIS-DFEIP 153
I N S+ + ++ +D GTY+C ++ K + A + A F P ++ D+
Sbjct: 109 IVGNASLRLKNVQLTDAGTYKCYII-----TSKGKGNANLEYKTGA-FSMPEVNVDYNAS 162
Query: 154 TSNIRRIICSTSGGFPEPHLSW---LENGEELNAI-NTTVSQDPETELYAVSSKLDFNMT 209
+ +R C FP+P + W ++ G + + NT+ + E V S L +N+T
Sbjct: 163 SETLR---CEAPRWFPQPTVVWASQVDQGANFSEVSNTSFELNSENVTMKVVSVL-YNVT 218
Query: 210 TNHSFMCLIK 219
N+++ C+I+
Sbjct: 219 INNTYSCMIE 228
>gi|71274107 melanoma cell adhesion molecule [Homo sapiens]
Length = 646
Score = 38.5 bits (88), Expect = 0.007
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 23/199 (11%)
Query: 38 VTKEVKEVATLSCGHNVSVEELAQTRIYW---QKEKK-MVLTMMSGDMNIWP-EYKNRTI 92
V EV A L CG + S L+ + W KEK+ ++ + G P EY+ R
Sbjct: 36 VEVEVGSTALLKCGLSQSQGNLSH--VDWFSVHKEKRTLIFRVRQGQGQSEPGEYEQRLS 93
Query: 93 FDITNNLSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISDFEI 152
++ + + P DE + C K +E+ ++ + + P ++ I
Sbjct: 94 LQ-DRGATLALTQVTPQDERIFLC----QGKRPRSQEYRIQLRVYKAPEEPNIQVNPLGI 148
Query: 153 PTSNIRR---IICSTSGGFPEPHLSWLENG----EELNAINTTVSQDPETE-LYAVSSKL 204
P ++ C G+P P + W +NG EE N ++ SQ E+ LY + S L
Sbjct: 149 PVNSKEPEEVATCVGRNGYPIPQVIWYKNGRPLKEEKNRVHIQSSQTVESSGLYTLQSIL 208
Query: 205 DFNMT---TNHSFMCLIKY 220
+ + F C + Y
Sbjct: 209 KAQLVKEDKDAQFYCELNY 227
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,360,148
Number of Sequences: 37866
Number of extensions: 489967
Number of successful extensions: 2096
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 195
Number of HSP's that attempted gapping in prelim test: 1695
Number of HSP's gapped (non-prelim): 566
length of query: 288
length of database: 18,247,518
effective HSP length: 101
effective length of query: 187
effective length of database: 14,423,052
effective search space: 2697110724
effective search space used: 2697110724
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.