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Search of human proteins with 13259512
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13259512 survival of motor neuron 1, telomeric isoform b
[Homo sapiens]
(262 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13259529 survival of motor neuron 2, centromeric isoform b [H... 550 e-157
gi|13259512 survival of motor neuron 1, telomeric isoform b [Hom... 550 e-157
gi|10937869 survival of motor neuron 2, centromeric isoform d [H... 534 e-152
gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo... 534 e-152
gi|13259531 survival of motor neuron 2, centromeric isoform c [H... 516 e-147
gi|13259527 survival of motor neuron 2, centromeric isoform a [H... 499 e-142
gi|5032113 survival motor neuron domain containing 1 [Homo sapiens] 60 2e-09
gi|225703108 tudor domain containing 3 isoform 2 [Homo sapiens] 44 1e-04
gi|225703106 tudor domain containing 3 isoform 1 [Homo sapiens] 44 1e-04
gi|13540576 tudor domain containing 3 isoform 2 [Homo sapiens] 44 1e-04
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 43 2e-04
gi|11415052 retinoid X receptor, beta [Homo sapiens] 43 3e-04
gi|31543452 PX domain containing serine/threonine kinase [Homo s... 41 0.001
gi|33356148 formin-like 1 [Homo sapiens] 41 0.001
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 40 0.002
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 40 0.002
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 40 0.002
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 40 0.002
gi|24497460 Shaw-related voltage-gated potassium channel protein... 39 0.004
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 38 0.008
gi|7706687 Enah/Vasp-like [Homo sapiens] 38 0.008
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 38 0.008
gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens] 38 0.010
gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens] 38 0.010
gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo sapi... 38 0.010
gi|160707881 formin 2 [Homo sapiens] 37 0.023
gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens] 36 0.030
gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens] 36 0.030
gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo sap... 36 0.030
gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo sap... 36 0.030
>gi|13259529 survival of motor neuron 2, centromeric isoform b [Homo
sapiens]
Length = 262
Score = 550 bits (1418), Expect = e-157
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC
Sbjct: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
Query: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR
Sbjct: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
Query: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS
Sbjct: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
Query: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY 240
DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY
Sbjct: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY 240
Query: 241 HTGYYMGFRQNQKEGRCSHSLN 262
HTGYYMGFRQNQKEGRCSHSLN
Sbjct: 241 HTGYYMGFRQNQKEGRCSHSLN 262
>gi|13259512 survival of motor neuron 1, telomeric isoform b [Homo
sapiens]
Length = 262
Score = 550 bits (1418), Expect = e-157
Identities = 262/262 (100%), Positives = 262/262 (100%)
Query: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC
Sbjct: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
Query: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR
Sbjct: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
Query: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS
Sbjct: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
Query: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY 240
DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY
Sbjct: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY 240
Query: 241 HTGYYMGFRQNQKEGRCSHSLN 262
HTGYYMGFRQNQKEGRCSHSLN
Sbjct: 241 HTGYYMGFRQNQKEGRCSHSLN 262
>gi|10937869 survival of motor neuron 2, centromeric isoform d [Homo
sapiens]
Length = 294
Score = 534 bits (1375), Expect = e-152
Identities = 262/294 (89%), Positives = 262/294 (89%), Gaps = 32/294 (10%)
Query: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC
Sbjct: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
Query: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR
Sbjct: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
Query: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS
Sbjct: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
Query: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGK------------------------------- 209
DNIKPKSAPWNSFLPPPPPMPGPRLGPGK
Sbjct: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGP 240
Query: 210 -IIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHSLN 262
IIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHSLN
Sbjct: 241 PIIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHSLN 294
>gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo
sapiens]
Length = 294
Score = 534 bits (1375), Expect = e-152
Identities = 262/294 (89%), Positives = 262/294 (89%), Gaps = 32/294 (10%)
Query: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC
Sbjct: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
Query: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR
Sbjct: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
Query: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS
Sbjct: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
Query: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGK------------------------------- 209
DNIKPKSAPWNSFLPPPPPMPGPRLGPGK
Sbjct: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGP 240
Query: 210 -IIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHSLN 262
IIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHSLN
Sbjct: 241 PIIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFRQNQKEGRCSHSLN 294
>gi|13259531 survival of motor neuron 2, centromeric isoform c [Homo
sapiens]
Length = 250
Score = 516 bits (1329), Expect = e-147
Identities = 246/246 (100%), Positives = 246/246 (100%)
Query: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC
Sbjct: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
Query: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR
Sbjct: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
Query: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS
Sbjct: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
Query: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY 240
DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY
Sbjct: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGY 240
Query: 241 HTGYYM 246
HTGYYM
Sbjct: 241 HTGYYM 246
>gi|13259527 survival of motor neuron 2, centromeric isoform a [Homo
sapiens]
Length = 282
Score = 499 bits (1286), Expect = e-142
Identities = 246/278 (88%), Positives = 246/278 (88%), Gaps = 32/278 (11%)
Query: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC
Sbjct: 1 MAMSSGGSGGGVPEQEDSVLFRRGTGQSDDSDIWDDTALIKAYDKAVASFKHALKNGDIC 60
Query: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR
Sbjct: 61 ETSGKPKTTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKR 120
Query: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS
Sbjct: 121 ETCVVVYTGYGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKS 180
Query: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGK------------------------------- 209
DNIKPKSAPWNSFLPPPPPMPGPRLGPGK
Sbjct: 181 DNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGP 240
Query: 210 -IIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYM 246
IIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYM
Sbjct: 241 PIIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYM 278
>gi|5032113 survival motor neuron domain containing 1 [Homo sapiens]
Length = 238
Score = 60.1 bits (144), Expect = 2e-09
Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 92 WKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSDLLSPICEVANN 151
WKVGDKC A+WSEDG Y A I ID + T + + GYGN E L + L P+ E
Sbjct: 73 WKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLN-LKPVEEGRKA 131
Query: 152 IEQNAQENENESQVSTDESENSRSPG-NKSDNIK 184
E + + ++ ++ + E + K+ IK
Sbjct: 132 KEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIK 165
>gi|225703108 tudor domain containing 3 isoform 2 [Homo sapiens]
Length = 651
Score = 43.9 bits (102), Expect = 1e-04
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 70 PKRK--PAKKNKSQKKNTAASL-QQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVV 126
PKR+ P K K + + + WK GD+C A++ ED Y A + ++ T VV
Sbjct: 531 PKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVK 590
Query: 127 YTGYGNREEQNLSDL 141
+ YGN EE LS++
Sbjct: 591 FIDYGNYEEVLLSNI 605
>gi|225703106 tudor domain containing 3 isoform 1 [Homo sapiens]
Length = 744
Score = 43.9 bits (102), Expect = 1e-04
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 70 PKRK--PAKKNKSQKKNTAASL-QQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVV 126
PKR+ P K K + + + WK GD+C A++ ED Y A + ++ T VV
Sbjct: 624 PKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVK 683
Query: 127 YTGYGNREEQNLSDL 141
+ YGN EE LS++
Sbjct: 684 FIDYGNYEEVLLSNI 698
>gi|13540576 tudor domain containing 3 isoform 2 [Homo sapiens]
Length = 651
Score = 43.9 bits (102), Expect = 1e-04
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 70 PKRK--PAKKNKSQKKNTAASL-QQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVV 126
PKR+ P K K + + + WK GD+C A++ ED Y A + ++ T VV
Sbjct: 531 PKRRSGPIKPEKILESSIPMEYAKMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVK 590
Query: 127 YTGYGNREEQNLSDL 141
+ YGN EE LS++
Sbjct: 591 FIDYGNYEEVLLSNI 605
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 43.1 bits (100), Expect = 2e-04
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIP 212
E+ + + + + DE R PG+ D + + +P L PPPP P P L P
Sbjct: 33 EEEVEAADEDDEEDDDEGVLGRGPGH--DRGRDRHSPPGCHLFPPPPPPPPPL------P 84
Query: 213 PPPPICPDSLDDADALGSML 232
PPPP P DD L S L
Sbjct: 85 PPPPPPPPDKDDIRLLPSAL 104
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 42.7 bits (99), Expect = 3e-04
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 168 DESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMP---GPRLGPGKIIPPPPPICPDSL 222
D +SRSP + S N P+ P S PP PP+P P LG G PPPPP+ P L
Sbjct: 75 DSGRDSRSPDSSSPNPLPQGVPPPS--PPGPPLPPSTAPSLG-GSGAPPPPPMPPPPL 129
>gi|31543452 PX domain containing serine/threonine kinase [Homo
sapiens]
Length = 578
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 19/137 (13%)
Query: 130 YGNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAP 189
+G+ EE+ +L+ + +E + + + S + + SP + P S
Sbjct: 450 HGSEEERKKRKILARKKSKRSALENSEEHSAKYSNSNNSAGSGASSPLTSPSSPTPPSTS 509
Query: 190 WNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGYHTGYYMGFR 249
S LPPPPP PPPPP P +A + L S ++G G +
Sbjct: 510 GISALPPPPP------------PPPPPAAPLPPASTEA-PAQLSSQAVNGMSRGALLSSI 556
Query: 250 QNQKEG------RCSHS 260
QN ++G C HS
Sbjct: 557 QNFQKGTLRKAKTCDHS 573
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 185 PKSAPWNSFLPPPPPMPGPRLG-PGKIIPPPPPICPDSLDDADALG 229
P + P LPPPPP P P G G + PPPPP P DALG
Sbjct: 575 PPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPPPPPPGGPPDALG 620
Score = 33.1 bits (74), Expect = 0.25
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 7/48 (14%)
Query: 176 PGNKSDNIKPKSAPWNSFLPP----PPPMPGPRLGPGKIIPPPPPICP 219
PG S P SAP + PP P P P P L PG + PPPPP P
Sbjct: 549 PGLPSPQEAPPSAPPQA--PPLPGSPEPPPAPPL-PGDLPPPPPPPPP 593
Score = 32.3 bits (72), Expect = 0.43
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 177 GNKSDNIKPKSAPWNSFLPPPPP----MPGPRLGPGKIIPPPPPI 217
G+ S ++ P + P PPPPP +P P+ P P PP+
Sbjct: 524 GSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPL 568
Score = 28.5 bits (62), Expect = 6.2
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 8/52 (15%)
Query: 176 PGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDSLDDADA 227
PG+ P P + P PPP P P PPPP PD+L D+
Sbjct: 581 PGDLPPPPPPPPPPPGTDGPVPPPPPPP--------PPPPGGPPDALGRRDS 624
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%)
Query: 135 EQNLSDLLSPICEVANNIEQNAQENENESQ--VSTDESENSRSP--------GNKSDNIK 184
E +S L + ++ +E +E + S ++ S SR+P G+ I
Sbjct: 529 EAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIP 588
Query: 185 PKSAPWNSFL--------PPPPPMPG-------PRLGPGKIIPPPPPICPDS 221
P AP +S PPPPP+PG P L G I PPPP+ D+
Sbjct: 589 PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDA 640
Score = 39.7 bits (91), Expect = 0.003
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 185 PKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDS 221
P S P + +PPPPP+PG IPPPPP P S
Sbjct: 657 PSSLPGGTAIPPPPPLPG-----SARIPPPPPPLPGS 688
Score = 38.9 bits (89), Expect = 0.005
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 176 PGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPP 216
PG P P +PPPPP PG GPG IPPPPP
Sbjct: 699 PGEAGMPPPPPPLPGGPGIPPPPPFPG---GPG--IPPPPP 734
Score = 34.3 bits (77), Expect = 0.11
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 176 PGNKSDNIKPKSAPWNSFL-PPPPPMPG--------PRLGPGKIIPPPPP 216
PG+ P P ++ + PPPPP+PG P L G IPPPPP
Sbjct: 673 PGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPP 722
Score = 31.6 bits (70), Expect = 0.73
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 185 PKSAPWNSFLPPPPPMP------GPRLGPGKIIPPPPPICPDS 221
P ++ +PPPPP+P P PG PPPP P S
Sbjct: 633 PPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGS 675
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 25/112 (22%)
Query: 135 EQNLSDLLSPICEVANNIEQNAQENENESQ--VSTDESENSRSP--------GNKSDNIK 184
E +S L + ++ +E +E + S ++ S SR+P G+ I
Sbjct: 538 EAEVSQLTGEVAKLTKELEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIP 597
Query: 185 PKSAPWNSFL--------PPPPPMPG-------PRLGPGKIIPPPPPICPDS 221
P AP +S PPPPP+PG P L G I PPPP+ D+
Sbjct: 598 PPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDA 649
Score = 39.7 bits (91), Expect = 0.003
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
Query: 185 PKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICPDS 221
P S P + +PPPPP+PG IPPPPP P S
Sbjct: 666 PSSLPGGTAIPPPPPLPG-----SARIPPPPPPLPGS 697
Score = 38.9 bits (89), Expect = 0.005
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 176 PGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPP 216
PG P P +PPPPP PG GPG IPPPPP
Sbjct: 708 PGEAGMPPPPPPLPGGPGIPPPPPFPG---GPG--IPPPPP 743
Score = 34.3 bits (77), Expect = 0.11
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 9/50 (18%)
Query: 176 PGNKSDNIKPKSAPWNSFL-PPPPPMPG--------PRLGPGKIIPPPPP 216
PG+ P P ++ + PPPPP+PG P L G IPPPPP
Sbjct: 682 PGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPP 731
Score = 31.6 bits (70), Expect = 0.73
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Query: 185 PKSAPWNSFLPPPPPMP------GPRLGPGKIIPPPPPICPDS 221
P ++ +PPPPP+P P PG PPPP P S
Sbjct: 642 PPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGS 684
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 147 EVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLG 206
E +E Q+ ++QV S +S PG P +AP + PPPP P P L
Sbjct: 523 EKIKELEAEIQQLRTQAQVL---SSSSGIPG-------PPAAPPLPGVGPPPPPPAPPLP 572
Query: 207 PGKIIPPPPPICP 219
G +PPPPP P
Sbjct: 573 GGAPLPPPPPPLP 585
Score = 30.4 bits (67), Expect = 1.6
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 176 PGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPI 217
PG P P +PPPPP P GP PPPPP+
Sbjct: 572 PGGAPLPPPPPPLPGMMGIPPPPPPPLLFGGP----PPPPPL 609
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 40.4 bits (93), Expect = 0.002
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 147 EVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLG 206
E +E Q+ ++QV S +S PG P +AP + PPPP P P L
Sbjct: 523 EKIKELEAEIQQLRTQAQVL---SSSSGIPG-------PPAAPPLPGVGPPPPPPAPPLP 572
Query: 207 PGKIIPPPPPICP 219
G +PPPPP P
Sbjct: 573 GGAPLPPPPPPLP 585
Score = 30.4 bits (67), Expect = 1.6
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 176 PGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPI 217
PG P P +PPPPP P GP PPPPP+
Sbjct: 572 PGGAPLPPPPPPLPGMMGIPPPPPPPLLFGGP----PPPPPL 609
>gi|24497460 Shaw-related voltage-gated potassium channel protein 3
[Homo sapiens]
Length = 757
Score = 39.3 bits (90), Expect = 0.004
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Query: 195 PPPPPMPGPRLGPGKIIPPPPPICPDSLDDADALGSMLISWYMSGYHT 242
PPPPP P P G G I PPPPI P S +G + Y +G HT
Sbjct: 579 PPPPPPPHPHHGSGG-ISPPPPITPPS------MGVTVAGAYPAGPHT 619
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 38.1 bits (87), Expect = 0.008
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 133 REEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNS 192
++EQ L D E E+ ++ E E + +E K + P
Sbjct: 356 KQEQKLDD------EEEEKKEEEEKDKEGEEKEERAVAEEMMPAAEKEEAKLPPPPLTPP 409
Query: 193 FLPPPPPMPGPRLGPGKII--PPPPPICPDSL 222
PPPP+P P P + PPPPP+ P L
Sbjct: 410 APSPPPPLPPPSTSPPPPLCPPPPPPVSPPPL 441
Score = 32.3 bits (72), Expect = 0.43
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 6/82 (7%)
Query: 138 LSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSF---L 194
+S +L P + + Q + + T S P + ++ + W S L
Sbjct: 559 VSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTREL 618
Query: 195 PPPPPMPGPRLGPGKIIPPPPP 216
PPPPP P P P PPP P
Sbjct: 619 PPPPPAPPPPPAPS---PPPAP 637
Score = 31.2 bits (69), Expect = 0.96
Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Query: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPP--PMPGPRLGPGKI 210
E+ A E +E++ P P P S PPPP P P P + P +
Sbjct: 382 EERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPL 441
Query: 211 IPPPPPICPDSLDDA 225
PPPP + +++
Sbjct: 442 PSPPPPPAQEEQEES 456
>gi|7706687 Enah/Vasp-like [Homo sapiens]
Length = 418
Score = 38.1 bits (87), Expect = 0.008
Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 152 IEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKII 211
+EQ+ Q+ + + T + PG+ S SAP + PPPPP P P
Sbjct: 144 MEQHQQQRQESLERRTSATGPILPPGHPSS---AASAPVSCSGPPPPPPPPVPPPPTGAT 200
Query: 212 PPPPPICP 219
PPPPP P
Sbjct: 201 PPPPPPLP 208
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 38.1 bits (87), Expect = 0.008
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 136 QNLSDLLSPICEVANNIEQNAQENENESQVSTDES----ENSRS------PGNKSDNIK- 184
Q +++ + ++ +E+ E++ Q D + E SR PG S
Sbjct: 478 QEKEEMMQTLNKMKEKLEKETTEHKQVKQQVADLTAQLHELSRRAVCASIPGGPSPGAPG 537
Query: 185 ---PKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPICP 219
P S P S LPPPPP P P G + PPPPP+ P
Sbjct: 538 GPFPSSVP-GSLLPPPPPPPLPG---GMLPPPPPPLPP 571
Score = 31.6 bits (70), Expect = 0.73
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
Query: 173 SRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPP 216
S PG+ P P PPPPP+P PG PPPPP
Sbjct: 542 SSVPGSLLPPPPPPPLPGGMLPPPPPPLP-----PGG--PPPPP 578
>gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]
Length = 849
Score = 37.7 bits (86), Expect = 0.010
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKP--KSAPWNSFLPPPPPMPGPRLGPGKI 210
++ A+ NE ++++ +S+ P + + + P + +S LPPPPP+P G +
Sbjct: 269 KKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSG----GGV 324
Query: 211 IPPPPPICPDSL 222
PPPPP P L
Sbjct: 325 PPPPPPPPPPPL 336
Score = 37.0 bits (84), Expect = 0.017
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 195 PPPPPMPGPRLGPGKIIPPPPPI 217
PPPPP+PG R+ +PPPPP+
Sbjct: 331 PPPPPLPGMRMPFSGPVPPPPPL 353
>gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]
Length = 1193
Score = 37.7 bits (86), Expect = 0.010
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 6/72 (8%)
Query: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKP--KSAPWNSFLPPPPPMPGPRLGPGKI 210
++ A+ NE ++++ +S+ P + + + P + +S LPPPPP+P G +
Sbjct: 532 KKEAKINELQAELQAFKSQFGALPADCNIPLPPSKEGGTGHSALPPPPPLPSG----GGV 587
Query: 211 IPPPPPICPDSL 222
PPPPP P L
Sbjct: 588 PPPPPPPPPPPL 599
Score = 37.0 bits (84), Expect = 0.017
Identities = 13/23 (56%), Positives = 17/23 (73%)
Query: 195 PPPPPMPGPRLGPGKIIPPPPPI 217
PPPPP+PG R+ +PPPPP+
Sbjct: 594 PPPPPLPGMRMPFSGPVPPPPPL 616
>gi|29029601 DEAH (Asp-Glu-Ala-His) box polypeptide 37 [Homo
sapiens]
Length = 1157
Score = 37.7 bits (86), Expect = 0.010
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGP---GK 209
E+ +E E+ES++ +ESE P +P A + + P PP P P P G
Sbjct: 161 EEEEEEEESESELE-EESELDEDPA-----AEPAEAGVGTTVAPLPPAPAPSSQPVPAGM 214
Query: 210 IIPPPPPICP 219
+PPPP P
Sbjct: 215 TVPPPPAAAP 224
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 953 IPPPPPLPGAGIPLPPPLPGAGIPPPPPL 981
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 975 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1003
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 986 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1014
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 997 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1025
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1008 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1036
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1019 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1047
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1030 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1058
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1041 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1069
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1052 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1080
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1063 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1091
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1074 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1102
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1096 IPPPPPLPGVGIPPPPPLPGAGIPPPPPL 1124
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1107 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1135
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1118 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1146
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1151 IPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1179
Score = 36.6 bits (83), Expect = 0.023
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1184 IPPPPPLPGVGIPPPPPLPGAGIPPPPPL 1212
Score = 36.2 bits (82), Expect = 0.030
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1085 IPPPPPLPGAGIPPPPPLPGVGIPPPPPL 1113
Score = 36.2 bits (82), Expect = 0.030
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 16/40 (40%)
Query: 194 LPPPPPMPG---------PRLG-------PGKIIPPPPPI 217
+PPPPP+PG PR+G PG IPPPPP+
Sbjct: 1129 IPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPL 1168
Score = 36.2 bits (82), Expect = 0.030
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1162 IPPPPPLPGAGIPPPPPLPGVGIPPPPPL 1190
Score = 36.2 bits (82), Expect = 0.030
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+PPPPP+PG P PG IPPPPP+
Sbjct: 1173 IPPPPPLPGVGIPPPPPLPGVGIPPPPPL 1201
Score = 33.9 bits (76), Expect = 0.15
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 16/40 (40%)
Query: 194 LPPPPPMPG---------PRLG-------PGKIIPPPPPI 217
+PPPPP+PG P G PG IPPPPP+
Sbjct: 920 IPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPL 959
Score = 33.5 bits (75), Expect = 0.19
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 194 LPPPPPMPGPRLGPGKIIPPPPP 216
+PPPPP+PG + P P PPP
Sbjct: 1206 IPPPPPLPGMGIPPAPAPPLPPP 1228
Score = 32.7 bits (73), Expect = 0.33
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMPG-----PRLGPGKIIPPPPPI 217
+P PPP+PG P PG IPPPPP+
Sbjct: 964 IPLPPPLPGAGIPPPPPLPGAGIPPPPPL 992
Score = 32.0 bits (71), Expect = 0.56
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 6/23 (26%)
Query: 195 PPPPPMPGPRLGPGKIIPPPPPI 217
PPPPP+PG IPPPPP+
Sbjct: 910 PPPPPLPGAG------IPPPPPL 926
Score = 31.6 bits (70), Expect = 0.73
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 14/39 (35%)
Query: 195 PPPPPMPG--------------PRLGPGKIIPPPPPICP 219
PPPPP+PG P L +++PPPPP P
Sbjct: 878 PPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPPLP 916
Score = 28.5 bits (62), Expect = 6.2
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 5/29 (17%)
Query: 194 LPPPPPMP-----GPRLGPGKIIPPPPPI 217
+P PPP+P G G + PPPPP+
Sbjct: 855 IPSPPPLPCTESSSSMPGLGMVPPPPPPL 883
>gi|224994221 SH3-domain binding protein 2 isoform b [Homo sapiens]
Length = 618
Score = 36.2 bits (82), Expect = 0.030
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 25/79 (31%)
Query: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRL------- 205
E ++E++S + D E PG D + A PPPP+P PR
Sbjct: 229 EDYEHDDEDDSYLEPDSPE----PGRLEDALMHPPAY------PPPPVPTPRKPAFSDMP 278
Query: 206 --------GPGKIIPPPPP 216
GPG ++PPPPP
Sbjct: 279 RAHSFTSKGPGPLLPPPPP 297
>gi|224994219 SH3-domain binding protein 2 isoform c [Homo sapiens]
Length = 589
Score = 36.2 bits (82), Expect = 0.030
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 25/79 (31%)
Query: 153 EQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRL------- 205
E ++E++S + D E PG D + A PPPP+P PR
Sbjct: 200 EDYEHDDEDDSYLEPDSPE----PGRLEDALMHPPAY------PPPPVPTPRKPAFSDMP 249
Query: 206 --------GPGKIIPPPPP 216
GPG ++PPPPP
Sbjct: 250 RAHSFTSKGPGPLLPPPPP 268
>gi|169214080 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 36.2 bits (82), Expect = 0.030
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 172 NSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPI 217
++R+P ++ +++ +L PPPP PGPR + PPPPP+
Sbjct: 136 DARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPR--KARAPPPPPPL 179
>gi|169214500 PREDICTED: hypothetical protein LOC646862 [Homo
sapiens]
Length = 329
Score = 36.2 bits (82), Expect = 0.030
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 172 NSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKIIPPPPPI 217
++R+P ++ +++ +L PPPP PGPR + PPPPP+
Sbjct: 136 DARAPPSRQGSVRFDRRRGLLYLRPPPPPPGPR--KARAPPPPPPL 179
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.130 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,746,634
Number of Sequences: 37866
Number of extensions: 826934
Number of successful extensions: 10046
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 325
Number of HSP's that attempted gapping in prelim test: 6364
Number of HSP's gapped (non-prelim): 2851
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.