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Search of human proteins with 4759220
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4759220 T-cell leukemia/lymphoma 1B [Homo sapiens]
(128 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40548375 T-cell leukemia/lymphoma 1B [Homo sapiens] 268 9e-73
gi|4759220 T-cell leukemia/lymphoma 1B [Homo sapiens] 268 9e-73
gi|66346715 mature T-cell proliferation 1 [Homo sapiens] 67 4e-12
gi|148922879 T-cell leukemia/lymphoma 1A [Homo sapiens] 59 1e-09
gi|11415028 T-cell leukemia/lymphoma 1A [Homo sapiens] 59 1e-09
gi|116534900 dopamine beta hydroxylase precursor [Homo sapiens] 30 0.67
gi|194272183 G protein-coupled receptor 124 [Homo sapiens] 30 0.67
gi|10863945 ATP-dependent DNA helicase II [Homo sapiens] 28 2.6
gi|21070976 diablo isoform 3 precursor [Homo sapiens] 28 2.6
gi|9845297 diablo isoform 1 precursor [Homo sapiens] 28 2.6
gi|28872800 CCAAT/enhancer binding protein epsilon [Homo sapiens] 27 5.7
gi|239756943 PREDICTED: hypothetical protein [Homo sapiens] 26 7.4
gi|239751443 PREDICTED: hypothetical protein [Homo sapiens] 26 7.4
gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo ... 26 7.4
gi|20149540 lysyl oxidase preproprotein [Homo sapiens] 26 9.7
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 26 9.7
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 26 9.7
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 26 9.7
>gi|40548375 T-cell leukemia/lymphoma 1B [Homo sapiens]
Length = 128
Score = 268 bits (685), Expect = 9e-73
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT 60
MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT
Sbjct: 1 MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT 60
Query: 61 VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL
Sbjct: 61 VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
Query: 121 TYQPERKD 128
TYQPERKD
Sbjct: 121 TYQPERKD 128
>gi|4759220 T-cell leukemia/lymphoma 1B [Homo sapiens]
Length = 128
Score = 268 bits (685), Expect = 9e-73
Identities = 128/128 (100%), Positives = 128/128 (100%)
Query: 1 MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT 60
MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT
Sbjct: 1 MASEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSIT 60
Query: 61 VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL
Sbjct: 61 VHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
Query: 121 TYQPERKD 128
TYQPERKD
Sbjct: 121 TYQPERKD 128
>gi|66346715 mature T-cell proliferation 1 [Homo sapiens]
Length = 107
Score = 67.0 bits (162), Expect = 4e-12
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 9 LGVPPGRLWIQRPGIYEDEEGRTWVTVV---VRFNPSRREWARASQGSRYEPSITVHLWQ 65
+G PP LW+ + GIY DE RTWV VV F +R + + G PS
Sbjct: 6 VGAPPDHLWVHQEGIYRDEYQRTWVAVVEEETSFLRARVQQIQVPLGDAARPS------- 58
Query: 66 MAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVLTYQPE 125
LL+S QLP +WQLYP +Y +S W+I H + +++L+L P+
Sbjct: 59 ------HLLTS------QLPLMWQLYPEERYMDNNSRLWQIQHHLMVRGVQELLLKLLPD 106
>gi|148922879 T-cell leukemia/lymphoma 1A [Homo sapiens]
Length = 114
Score = 58.9 bits (141), Expect = 1e-09
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 13 PGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSITVHLWQMAVHTRE 72
P RLW +Y DE+ W+ + + + + V L + V
Sbjct: 15 PDRLWAWEKFVYLDEKQHAWLPLTIEIKDRLQ--------------LRVLLRREDVVLGR 60
Query: 73 LLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVLTYQPE 125
++ Q+ S LP +WQLYP +YR++DSSFW + H +ID +E ++L P+
Sbjct: 61 PMTPTQIGPSLLPIMWQLYPDGRYRSSDSSFWRLVYHIKIDGVEDMLLELLPD 113
>gi|11415028 T-cell leukemia/lymphoma 1A [Homo sapiens]
Length = 114
Score = 58.9 bits (141), Expect = 1e-09
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 14/113 (12%)
Query: 13 PGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEPSITVHLWQMAVHTRE 72
P RLW +Y DE+ W+ + + + + V L + V
Sbjct: 15 PDRLWAWEKFVYLDEKQHAWLPLTIEIKDRLQ--------------LRVLLRREDVVLGR 60
Query: 73 LLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVLTYQPE 125
++ Q+ S LP +WQLYP +YR++DSSFW + H +ID +E ++L P+
Sbjct: 61 PMTPTQIGPSLLPIMWQLYPDGRYRSSDSSFWRLVYHIKIDGVEDMLLELLPD 113
>gi|116534900 dopamine beta hydroxylase precursor [Homo sapiens]
Length = 617
Score = 29.6 bits (65), Expect = 0.67
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 3 SEASVRLGVPPGRLWIQRPGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEP 57
++ +L +PP + I ++ GR VTV+VR REW +Q + Y P
Sbjct: 391 TDKCTQLALPPSGIHIFASQLHTHLTGRKVVTVLVR---DGREWEIVNQDNHYSP 442
>gi|194272183 G protein-coupled receptor 124 [Homo sapiens]
Length = 1338
Score = 29.6 bits (65), Expect = 0.67
Identities = 24/88 (27%), Positives = 36/88 (40%)
Query: 41 PSRREWARASQGSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAAD 100
P R R + R+EP H TR L + MP + A+ + R Y A
Sbjct: 395 PGTRASRRCDRAGRWEPGDYSHCLYTNDITRVLYTFVLMPINASNALTLAHQLRVYTAEA 454
Query: 101 SSFWEIADHGQIDSMEQLVLTYQPERKD 128
+SF ++ D + M Q L Y + K+
Sbjct: 455 ASFSDMMDVVYVAQMIQKFLGYVDQIKE 482
>gi|10863945 ATP-dependent DNA helicase II [Homo sapiens]
Length = 732
Score = 27.7 bits (60), Expect = 2.6
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 57 PSITVHLWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRK 95
P I H+W M E+ + Q+P S++ ++ L +K
Sbjct: 506 PPIQQHIWNMLNPPAEVTTKSQIPLSKIKTLFPLIEAKK 544
>gi|21070976 diablo isoform 3 precursor [Homo sapiens]
Length = 195
Score = 27.7 bits (60), Expect = 2.6
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 63 LWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
+WQ+ + R ++S + +L W G AA++++ AD I + + L
Sbjct: 88 VWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARNHIQL 145
>gi|9845297 diablo isoform 1 precursor [Homo sapiens]
Length = 239
Score = 27.7 bits (60), Expect = 2.6
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 63 LWQMAVHTRELLSSGQMPFSQLPAVWQLYPGRKYRAADSSFWEIADHGQIDSMEQLVL 120
+WQ+ + R ++S + +L W G AA++++ AD I + + L
Sbjct: 132 VWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAEAAYQTGADQASITARNHIQL 189
>gi|28872800 CCAAT/enhancer binding protein epsilon [Homo sapiens]
Length = 281
Score = 26.6 bits (57), Expect = 5.7
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Query: 21 PGIYEDEEGRTWVTVVVRFNPSRREWARASQGSRYEP--SITVHLWQMAVHTRELLSSGQ 78
PGIY V V+ P E +RA+ Y P H Q A+H L++
Sbjct: 104 PGIYSSPGSYDPRAVAVKEEPRGPEGSRAASRGSYNPLQYQVAHCGQTAMHLPPTLAAPG 163
Query: 79 MPFSQLPA 86
P L A
Sbjct: 164 QPLRVLKA 171
>gi|239756943 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 26.2 bits (56), Expect = 7.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 50 SQGSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPA 86
S R E ++ + W +AV ++SSG M FS PA
Sbjct: 2 SSARRVELALPI-TWLLAVARGRMMSSGHMAFSHWPA 37
>gi|239751443 PREDICTED: hypothetical protein [Homo sapiens]
Length = 783
Score = 26.2 bits (56), Expect = 7.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 50 SQGSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPA 86
S R E ++ + W +AV ++SSG M FS PA
Sbjct: 2 SSARRVELALPI-TWLLAVARGRMMSSGHMAFSHWPA 37
>gi|239745948 PREDICTED: hypothetical protein XP_002343622 [Homo
sapiens]
Length = 791
Score = 26.2 bits (56), Expect = 7.4
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 50 SQGSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPA 86
S R E ++ + W +AV ++SSG M FS PA
Sbjct: 2 SSARRVELALPI-TWLLAVARGRMMSSGHMAFSHWPA 37
>gi|20149540 lysyl oxidase preproprotein [Homo sapiens]
Length = 417
Score = 25.8 bits (55), Expect = 9.7
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 85 PAVWQLYPGRKYRAADSSF-----WEIADHGQIDSMEQLVLTYQPERK 127
PA Q P R+ AA ++ WE ++GQ+ S+ L YQP+R+
Sbjct: 24 PAAGQQQPPREPPAAPGAWRQQIQWE--NNGQVFSLLSLGSQYQPQRR 69
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 25.8 bits (55), Expect = 9.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 52 GSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPAV 87
GS +PS T L ++ T ++ MP+S PAV
Sbjct: 1742 GSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAV 1777
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 25.8 bits (55), Expect = 9.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 52 GSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPAV 87
GS +PS T L ++ T ++ MP+S PAV
Sbjct: 1742 GSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAV 1777
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 25.8 bits (55), Expect = 9.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 52 GSRYEPSITVHLWQMAVHTRELLSSGQMPFSQLPAV 87
GS +PS T L ++ T ++ MP+S PAV
Sbjct: 1742 GSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAV 1777
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,646,152
Number of Sequences: 37866
Number of extensions: 228282
Number of successful extensions: 366
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 348
Number of HSP's gapped (non-prelim): 18
length of query: 128
length of database: 18,247,518
effective HSP length: 90
effective length of query: 38
effective length of database: 14,839,578
effective search space: 563903964
effective search space used: 563903964
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.