BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46361976 solute carrier family 37 (glycerol-3-phosphate
transporter), member 3 isoform 1 [Homo sapiens]
(494 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46361976 solute carrier family 37 (glycerol-3-phosphate trans... 995 0.0
gi|14150047 solute carrier family 37 (glycerol-3-phosphate trans... 706 0.0
gi|49619231 solute carrier family 37 member 1 [Homo sapiens] 278 6e-75
gi|223717983 solute carrier family 37 (glycerol-3-phosphate tran... 278 1e-74
gi|38093649 solute carrier family 37 (glycerol-3-phosphate trans... 278 1e-74
gi|4503847 solute carrier family 37 (glucose-6-phosphate transpo... 85 1e-16
gi|7662270 synaptic vesicle protein 2B homolog [Homo sapiens] 44 3e-04
gi|216548223 synaptic vesicle glycoprotein 2 [Homo sapiens] 41 0.002
gi|185136021 spinster homolog 2 [Homo sapiens] 40 0.004
gi|16445357 hypothetical protein LOC116843 [Homo sapiens] 37 0.041
gi|13236549 major facilitator superfamily domain containing 11 [... 34 0.27
gi|73695465 synaptic vesicle glycoprotein 2C [Homo sapiens] 34 0.35
gi|215490102 spinster homolog 1 isoform 3 [Homo sapiens] 32 1.0
gi|215490100 spinster homolog 1 isoform 2 [Homo sapiens] 32 1.7
gi|215490096 spinster homolog 1 isoform 1 [Homo sapiens] 32 1.7
gi|14042968 spinster homolog 1 isoform 1 [Homo sapiens] 32 1.7
gi|154350196 vesicular nucleotide transporter SLC17A9 [Homo sapi... 31 2.3
gi|9945322 solute carrier family 17, member 7 [Homo sapiens] 31 3.0
gi|20336248 proprotein convertase subtilisin/kexin type 7 prepro... 31 3.0
gi|194239645 spinster homolog 3 [Homo sapiens] 31 3.0
gi|7706117 solute carrier family 15, member 3 [Homo sapiens] 30 5.0
gi|31377722 PERP, TP53 apoptosis effector [Homo sapiens] 30 6.6
gi|8394395 taste receptor T2R16 [Homo sapiens] 30 6.6
gi|32455236 helicase (DNA) B [Homo sapiens] 29 8.6
gi|40789261 solute carrier family 16, member 6 [Homo sapiens] 29 8.6
>gi|46361976 solute carrier family 37 (glycerol-3-phosphate
transporter), member 3 isoform 1 [Homo sapiens]
Length = 494
Score = 995 bits (2572), Expect = 0.0
Identities = 494/494 (100%), Positives = 494/494 (100%)
Query: 1 MAWPNVFQRGSLLSQFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTS 60
MAWPNVFQRGSLLSQFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTS
Sbjct: 1 MAWPNVFQRGSLLSQFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTS 60
Query: 61 VELPVEIWSSNHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMC 120
VELPVEIWSSNHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMC
Sbjct: 61 VELPVEIWSSNHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMC 120
Query: 121 SSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFG 180
SSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFG
Sbjct: 121 SSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFG 180
Query: 181 LWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE 240
LWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE
Sbjct: 181 LWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE 240
Query: 241 AEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYA 300
AEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYA
Sbjct: 241 AEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYA 300
Query: 301 CLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRAPVL 360
CLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRAPVL
Sbjct: 301 CLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRAPVL 360
Query: 361 ALSLLLAVGSLIGYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQELIQRSS 420
ALSLLLAVGSLIGYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQELIQRSS
Sbjct: 361 ALSLLLAVGSLIGYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQELIQRSS 420
Query: 421 EALATVTGIVDGSGSIGAAVGQYLVSLIRDKLGWMWVFYFFILMTSCTIVFISPLIVREI 480
EALATVTGIVDGSGSIGAAVGQYLVSLIRDKLGWMWVFYFFILMTSCTIVFISPLIVREI
Sbjct: 421 EALATVTGIVDGSGSIGAAVGQYLVSLIRDKLGWMWVFYFFILMTSCTIVFISPLIVREI 480
Query: 481 FSLVLRRQAHILRE 494
FSLVLRRQAHILRE
Sbjct: 481 FSLVLRRQAHILRE 494
>gi|14150047 solute carrier family 37 (glycerol-3-phosphate
transporter), member 3 isoform 2 [Homo sapiens]
Length = 443
Score = 706 bits (1821), Expect = 0.0
Identities = 341/341 (100%), Positives = 341/341 (100%)
Query: 1 MAWPNVFQRGSLLSQFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTS 60
MAWPNVFQRGSLLSQFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTS
Sbjct: 1 MAWPNVFQRGSLLSQFSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTS 60
Query: 61 VELPVEIWSSNHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMC 120
VELPVEIWSSNHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMC
Sbjct: 61 VELPVEIWSSNHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMC 120
Query: 121 SSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFG 180
SSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFG
Sbjct: 121 SSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFG 180
Query: 181 LWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE 240
LWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE
Sbjct: 181 LWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE 240
Query: 241 AEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYA 300
AEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYA
Sbjct: 241 AEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYA 300
Query: 301 CLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGII 341
CLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGII
Sbjct: 301 CLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGII 341
>gi|49619231 solute carrier family 37 member 1 [Homo sapiens]
Length = 533
Score = 278 bits (712), Expect = 6e-75
Identities = 172/500 (34%), Positives = 265/500 (53%), Gaps = 40/500 (8%)
Query: 19 HHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQ---WTPSAFNTSVELPVEIWSSNHLFP 75
+ +F+LTF Y+ H SRK S VK + + W + S + ++ H P
Sbjct: 20 YRAFIFILTFLLYASFHLSRKPISIVKGELHKYCTAWDEADVRFSSQNRKSGSAAPHQLP 79
Query: 76 SAE-----------KATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSAL 124
E LG LD FL +YAVG+++SGI+G+RL +R+ L+FGM +S
Sbjct: 80 DNETDCGWAPFDKNNYQQLLGALDYSFLCAYAVGMYLSGIIGERLPIRYYLTFGMLASGA 139
Query: 125 VVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSA 184
+FG L + ++ Y ++NGL+Q+TGWP VV +GNWFGK RG++ G+W++
Sbjct: 140 FTALFG-LGYFYNIHSFGFYVVTQVINGLVQTTGWPSVVTCLGNWFGKGRRGLIMGVWNS 198
Query: 185 CASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSG------ 238
SVGNILG+ +A + + +F+V ++ A GIV F L+ P ++ S
Sbjct: 199 HTSVGNILGSLIAGYWVSTCWGLSFVVPGAIVAAMGIVCFLFLIEHPNDVRCSSTLVTHS 258
Query: 239 ----------------IEAEENFEEDSHRPLINGGENEDEYEPNY-SIQDDSSVAQVKAI 281
+++E+N D + + + PN+ I + AI
Sbjct: 259 KGYENGTNRLRLQKQILKSEKNKPLDPEMQCLLLSDGKGSIHPNHVVILPGDGGSGTAAI 318
Query: 282 SFYQACCLPGVIPYSLAYACLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGII 341
SF A +PGVI +SL KLV+Y+F FWLP Y++N +A +LS +DVGGI
Sbjct: 319 SFTGALKIPGVIEFSLCLLFAKLVSYTFLFWLPLYITNVDHLDAKKAGELSTLFDVGGIF 378
Query: 342 GGTLQGFISDVLQKRAPVLALSLLLAVGSLIGYSR-SPNDKSINALLMTVTGFFIGGPSN 400
GG L G ISD L+KRA L LLLA +L +S S ++ ++G + GP
Sbjct: 379 GGILAGVISDRLEKRASTCGLMLLLAAPTLYIFSTVSKMGLEATIAMLLLSGALVSGPYT 438
Query: 401 MISSAISADLGRQELIQRSSEALATVTGIVDGSGSIGAAVGQYLVSLIRDKLGWMWVFYF 460
+I++A+SADLG + ++ ++ AL+TVT I+DG+GS+GAA+G L L+ GW VFY
Sbjct: 439 LITTAVSADLGTHKSLKGNAHALSTVTAIIDGTGSVGAALGPLLAGLLSPS-GWSNVFYM 497
Query: 461 FILMTSCTIVFISPLIVREI 480
+ +C ++F+ LI +E+
Sbjct: 498 LMFADACALLFLIRLIHKEL 517
>gi|223717983 solute carrier family 37 (glycerol-3-phosphate
transporter), member 2 isoform 2 [Homo sapiens]
Length = 501
Score = 278 bits (710), Expect = 1e-74
Identities = 171/476 (35%), Positives = 255/476 (53%), Gaps = 27/476 (5%)
Query: 22 VVFLLTFFSYSLLHASRKTFSNVKVSI----SEQWTPSAFNTSVELPVEIWSSNHLFPSA 77
++ LLTF Y+ H SRK S VK + SEQ P N + L +W S F
Sbjct: 24 LILLLTFLIYACYHMSRKPISIVKSRLHQNCSEQIKP--INDTHSLNDTMWCSWAPFDKD 81
Query: 78 EKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLR 137
L LG +D FL +YA+G+FISG+ G+RL LR+ LS GM S L +FG W
Sbjct: 82 NYKEL-LGGVDNAFLIAYAIGMFISGVFGERLPLRYYLSAGMLLSGLFTSLFGLGYFW-N 139
Query: 138 FYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLA 197
+ W + + + NGL+Q+TGWP VV +GNWFGK RG + G+W++ SVGNILG+ +A
Sbjct: 140 IHELWYFVVIQVCNGLVQTTGWPSVVTCVGNWFGKGKRGFIMGIWNSHTSVGNILGSLIA 199
Query: 198 SSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGG 257
+ + +F+V + G++ F L+ PE++ + + E+ P
Sbjct: 200 GIWVNGQWGLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNP----- 254
Query: 258 ENEDEYEPNYSIQDDSSVAQVK----------AISFYQACCLPGVIPYSLAYACLKLVNY 307
ED SI++ K AISF+ A +PGV+ +SL KLV+Y
Sbjct: 255 --EDPGNSPCSIRESGLETVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSY 312
Query: 308 SFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRAPVLALSLLLA 367
+F +WLP Y++N + EA LS +DVGGIIGG + G +SD RA + L+LA
Sbjct: 313 TFLYWLPLYIANVAHFSAKEAGDLSTLFDVGGIIGGIVAGLVSDYTNGRATTCCVMLILA 372
Query: 368 VGSLIGYSRSPNDKSINALLM-TVTGFFIGGPSNMISSAISADLGRQELIQRSSEALATV 426
+ Y+ D ++++M + G + GP +I++A+SADLG + ++ +++AL+TV
Sbjct: 373 APMMFLYNYIGQDGIASSIVMLIICGGLVNGPYALITTAVSADLGTHKSLKGNAKALSTV 432
Query: 427 TGIVDGSGSIGAAVGQYLVSLIRDKLGWMWVFYFFILMTSCTIVFISPLIVREIFS 482
T I+DG+GSIGAA+G L LI GW VFY I + + L+ +EI +
Sbjct: 433 TAIIDGTGSIGAALGPLLAGLI-SPTGWNNVFYMLISADVLACLLLCRLVYKEILA 487
>gi|38093649 solute carrier family 37 (glycerol-3-phosphate
transporter), member 2 isoform 1 [Homo sapiens]
Length = 505
Score = 278 bits (710), Expect = 1e-74
Identities = 171/476 (35%), Positives = 255/476 (53%), Gaps = 27/476 (5%)
Query: 22 VVFLLTFFSYSLLHASRKTFSNVKVSI----SEQWTPSAFNTSVELPVEIWSSNHLFPSA 77
++ LLTF Y+ H SRK S VK + SEQ P N + L +W S F
Sbjct: 24 LILLLTFLIYACYHMSRKPISIVKSRLHQNCSEQIKP--INDTHSLNDTMWCSWAPFDKD 81
Query: 78 EKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLR 137
L LG +D FL +YA+G+FISG+ G+RL LR+ LS GM S L +FG W
Sbjct: 82 NYKEL-LGGVDNAFLIAYAIGMFISGVFGERLPLRYYLSAGMLLSGLFTSLFGLGYFW-N 139
Query: 138 FYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLA 197
+ W + + + NGL+Q+TGWP VV +GNWFGK RG + G+W++ SVGNILG+ +A
Sbjct: 140 IHELWYFVVIQVCNGLVQTTGWPSVVTCVGNWFGKGKRGFIMGIWNSHTSVGNILGSLIA 199
Query: 198 SSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGG 257
+ + +F+V + G++ F L+ PE++ + + E+ P
Sbjct: 200 GIWVNGQWGLSFIVPGIITAVMGVITFLFLIEHPEDVDCAPPQHHGEPAENQDNP----- 254
Query: 258 ENEDEYEPNYSIQDDSSVAQVK----------AISFYQACCLPGVIPYSLAYACLKLVNY 307
ED SI++ K AISF+ A +PGV+ +SL KLV+Y
Sbjct: 255 --EDPGNSPCSIRESGLETVAKCSKGPCEEPAAISFFGALRIPGVVEFSLCLLFAKLVSY 312
Query: 308 SFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRAPVLALSLLLA 367
+F +WLP Y++N + EA LS +DVGGIIGG + G +SD RA + L+LA
Sbjct: 313 TFLYWLPLYIANVAHFSAKEAGDLSTLFDVGGIIGGIVAGLVSDYTNGRATTCCVMLILA 372
Query: 368 VGSLIGYSRSPNDKSINALLM-TVTGFFIGGPSNMISSAISADLGRQELIQRSSEALATV 426
+ Y+ D ++++M + G + GP +I++A+SADLG + ++ +++AL+TV
Sbjct: 373 APMMFLYNYIGQDGIASSIVMLIICGGLVNGPYALITTAVSADLGTHKSLKGNAKALSTV 432
Query: 427 TGIVDGSGSIGAAVGQYLVSLIRDKLGWMWVFYFFILMTSCTIVFISPLIVREIFS 482
T I+DG+GSIGAA+G L LI GW VFY I + + L+ +EI +
Sbjct: 433 TAIIDGTGSIGAALGPLLAGLI-SPTGWNNVFYMLISADVLACLLLCRLVYKEILA 487
>gi|4503847 solute carrier family 37 (glucose-6-phosphate
transporter), member 4 [Homo sapiens]
Length = 429
Score = 85.1 bits (209), Expect = 1e-16
Identities = 77/346 (22%), Positives = 142/346 (41%), Gaps = 64/346 (18%)
Query: 16 FSHHHVVVFLLTFFSYSLLHASRKTFSNVKVSISEQWTPSAFNTSVELPVEIWSSNHLFP 75
+ ++ V+F F YSL + +RKTFS V S+ E E+P++ +
Sbjct: 6 YGYYRTVIFSAMFGGYSLYYFNRKTFSFVMPSLVE-----------EIPLDKDDLGFITS 54
Query: 76 SAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEW 135
S A YA+ F+SG++ D+++ RW+ S G+ LV F W
Sbjct: 55 SQSAA--------------YAISKFVSGVLSDQMSARWLFSSGLLLVGLVNIFFA----W 96
Query: 136 LRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGAC 195
++ LW +NGL Q GWP V+ WF + G + + S ++ LG
Sbjct: 97 SSTVP--VFAALWFLNGLAQGLGWPPCGKVLRKWFEPSQFGTWWAILSTSMNLAGGLGPI 154
Query: 196 LASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLV----SPEEIGLSGIEAEENFEEDSHR 251
LA+ + Q Y++ T ++ A +V+ F L+ P ++GL ++
Sbjct: 155 LATILAQ---SYSWRSTLALSGALCVVVSFLCLLLIHNEPADVGLRNLD----------- 200
Query: 252 PLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYACLKLVNYSFFF 311
P+ + G+ S++++S++ ++ + ++ + + C
Sbjct: 201 PMPSEGKKG-------SLKEESTLQELLLSPYLWVLSTGYLVVFGVKTCCTD-------- 245
Query: 312 WLPFYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRA 357
W F+L G +VGG++G G++SD +A
Sbjct: 246 WGQFFLIQEKGQSALVGSSYMSALEVGGLVGSIAAGYLSDRAMAKA 291
>gi|7662270 synaptic vesicle protein 2B homolog [Homo sapiens]
Length = 683
Score = 43.9 bits (102), Expect = 3e-04
Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 16/203 (7%)
Query: 65 VEIWSSNHLFPSAEK----ATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMC 120
VE++ + PSAEK ++ G L I G FI G + D+L + VLS +
Sbjct: 124 VEVFVVSFALPSAEKDMCLSSSKKGMLGMIVYLGMMAGAFILGGLADKLGRKRVLSMSLA 183
Query: 121 SSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFG 180
+A F +L+ +++ Y +L+C L ++G+ P V A + + RG
Sbjct: 184 VNA----SFASLSSFVQGYGAFLFCRL--ISGIGIGGALPIVFAYFSEFLSREKRGEHLS 237
Query: 181 LWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIE 240
G + + +A S++ + Y + F + + F V F + P + + ++
Sbjct: 238 WLGIFWMTGGLYASAMAWSIIPH-YGWGFSMGTNYHFHSWRV-FVIVCALPCTVSMVALK 295
Query: 241 AEENFEEDSHRPLINGGENEDEY 263
F +S R L+ G++++ +
Sbjct: 296 ----FMPESPRFLLEMGKHDEAW 314
>gi|216548223 synaptic vesicle glycoprotein 2 [Homo sapiens]
Length = 742
Score = 41.2 bits (95), Expect = 0.002
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 11/157 (7%)
Query: 65 VEIWSSNHLFPSAEKATLFL----GTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMC 120
VE++ + PSAEK G L I VG F+ G + DRL R L +
Sbjct: 181 VEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLS 240
Query: 121 SSALVVFVFGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFG 180
++ VF + +++ Y +L+C L ++G+ P V + + + RG
Sbjct: 241 VNS----VFAFFSSFVQGYGTFLFCRL--LSGVGIGGSIPIVFSYFSEFLAQEKRGEHLS 294
Query: 181 LWSACASVGNILGACLASSVLQYGYEYAFLVTASVQF 217
+G + A +A +++ + Y ++F + ++ QF
Sbjct: 295 WLCMFWMIGGVYAAAMAWAIIPH-YGWSFQMGSAYQF 330
>gi|185136021 spinster homolog 2 [Homo sapiens]
Length = 549
Score = 40.4 bits (93), Expect = 0.004
Identities = 33/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 85 GTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYNKWLY 144
G L ++F+ S+ V I G +GDR N + +LS G +F + A+T F + +
Sbjct: 141 GLLQSVFICSFMVAAPIFGYLGDRFNRKVILSCG-------IFFWSAVTFSSSFIPQQYF 193
Query: 145 CCLWIVNGLL---QSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLASSVL 201
L + GL+ +++ ++G+ F K R ++ ++ +G+ LG SSV
Sbjct: 194 WLLVLSRGLVGIGEASYSTIAPTIIGDLFTKNTRTLMLSVFYFAIPLGSGLGYITGSSVK 253
Query: 202 QYGYEYAFLVTAS 214
Q ++ + + S
Sbjct: 254 QAAGDWHWALRVS 266
>gi|16445357 hypothetical protein LOC116843 [Homo sapiens]
Length = 456
Score = 37.0 bits (84), Expect = 0.041
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 78 EKATLFLGTLDTIFL---FSYAVGLFISGIVGDRLN--LRWVLSFGMCSSALVVFVFGAL 132
EK L G + +FL SYA+ + G++ D+ +W+L FG +A + G +
Sbjct: 264 EKFNLPAGYVGLVFLGMALSYAISSPLFGLLSDKRPPLRKWLLVFGNLITAGCYMLLGPV 323
Query: 133 TEWLRFYNKWLYCCLWIVNGLLQSTG----WPCVVAVMG-NWF--GKAGRGVVFGLWSAC 185
WL + +V+GL +P +++ N F G + G+V GL+SA
Sbjct: 324 PILHIKSQLWLLVLILVVSGLSAGMSIIPTFPEILSCAHENGFEEGLSTLGLVSGLFSAM 383
Query: 186 ASVGNILGACLASSVLQ-YGYEYAFLVTASVQFAGGIVI 223
S+G +G L + + G+E+A + G+ +
Sbjct: 384 WSIGAFMGPTLGGFLYEKIGFEWAAAIQGLWALISGLAM 422
>gi|13236549 major facilitator superfamily domain containing 11
[Homo sapiens]
Length = 449
Score = 34.3 bits (77), Expect = 0.27
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 220 GIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVK 279
G V+FF L+ P+ + G E++S ++ + E N S Q++ + A
Sbjct: 183 GTVLFF-LIRKPDSENVLG-------EDES--------SDDQDMEVNESAQNNLTKAVDA 226
Query: 280 AISFYQACCLPGVIPYSL--AYACLKLVNYSFFFWLPFYLSNNFGWKEAEADKLS-IWYD 336
++ C ++ S+ AY L+L +S + +N FG +E LS I+
Sbjct: 227 FKKSFKLCVTKEMLLLSITTAYTGLELTFFSGVYGTCIGATNKFGAEEKSLIGLSGIFIG 286
Query: 337 VGGIIGGTLQGFISDVLQ-KRAPVLALSLLL 366
+G I+GG+L G +S + R PV+ L +L+
Sbjct: 287 IGEILGGSLFGLLSKNNRFGRNPVVLLGILV 317
>gi|73695465 synaptic vesicle glycoprotein 2C [Homo sapiens]
Length = 727
Score = 33.9 bits (76), Expect = 0.35
Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 12/140 (8%)
Query: 83 FLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYNKW 142
FLGTL + G +S ++ DR+ +L M S + F W
Sbjct: 587 FLGTLAVL------PGNIVSALLMDRIGRLTMLGGSMVLSGISCFFL-----WFGTSESM 635
Query: 143 LYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLASSVLQ 202
+ L + NGL S W + V + R FG +A +LG + S++
Sbjct: 636 MIGMLCLYNGLTISA-WNSLDVVTVELYPTDRRATGFGFLNALCKAAAVLGNLIFGSLVS 694
Query: 203 YGYEYAFLVTASVQFAGGIV 222
L+ ++V GG+V
Sbjct: 695 ITKSIPILLASTVLVCGGLV 714
>gi|215490102 spinster homolog 1 isoform 3 [Homo sapiens]
Length = 476
Score = 32.3 bits (72), Expect = 1.0
Identities = 80/377 (21%), Positives = 138/377 (36%), Gaps = 82/377 (21%)
Query: 85 GTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYNKWLY 144
G + T+F+ SY V + G +GDR N ++++ G+ +LV + ++ + WL
Sbjct: 98 GLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG----SSFIPGEHFWLL 153
Query: 145 CCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLASSV--LQ 202
+ G+ +++ ++ + F R + ++ VG+ LG S V +
Sbjct: 154 LLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMA 213
Query: 203 YGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDE 262
+ +A VT + +++F + P E S P +N
Sbjct: 214 GDWHWALRVTPGLGVVAVLLLFLVVREPPRGA----------VERHSDLPPLN------- 256
Query: 263 YEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYACLKLVNYSFFFWLPFYLSNNFG 322
P D ++A + + F CL GV+ L + + +S
Sbjct: 257 --PTSWWADLRALA--RNLIFGLITCLTGVLGVGLGVEISRRLRHS-------------- 298
Query: 323 WKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRAPVLALSLLLAVGSLIGYSRSPNDKS 382
AD L G++G AP L LSL A GS++
Sbjct: 299 --NPRADPLVC---ATGLLGS-------------APFLFLSLACARGSIVA--------- 331
Query: 383 INALLMTVTGFFIGGPSNMISSAISADLGRQELI---QRSSEALATVTGIVDGSGSIGAA 439
T FIG ++ AI AD+ +I + ++EA V S +G A
Sbjct: 332 ------TYIFIFIGETLLSMNWAIVADILLYVVIPTRRSTAEAFQIVL-----SHLLGDA 380
Query: 440 VGQYLVSLIRDKLGWMW 456
YL+ LI D+L W
Sbjct: 381 GSPYLIGLISDRLRRNW 397
>gi|215490100 spinster homolog 1 isoform 2 [Homo sapiens]
Length = 455
Score = 31.6 bits (70), Expect = 1.7
Identities = 85/406 (20%), Positives = 149/406 (36%), Gaps = 88/406 (21%)
Query: 85 GTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYNKWLY 144
G + T+F+ SY V + G +GDR N ++++ G+ +LV + ++ + WL
Sbjct: 25 GLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG----SSFIPGEHFWLL 80
Query: 145 CCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLASSV--LQ 202
+ G+ +++ ++ + F R + ++ VG+ LG S V +
Sbjct: 81 LLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMA 140
Query: 203 YGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDE 262
+ +A VT + +++F + P E S P +N
Sbjct: 141 GDWHWALRVTPGLGVVAVLLLFLVVREPPRGA----------VERHSDLPPLN------- 183
Query: 263 YEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYACLKLVNYSFFFWLPFYLSNNF- 321
S A ++A++ P + SL + + V S W P +L +
Sbjct: 184 --------PTSWWADLRALARN-----PSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRV 230
Query: 322 ----------GWKEAEADKL--SIWYDVGGIIGGTLQGFISDVLQK-------------- 355
G + +D L + + G++G L IS L+
Sbjct: 231 VLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCATGL 290
Query: 356 --RAPVLALSLLLAVGSLIGYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQ 413
AP L LSL A GS++ T FIG ++ AI AD+
Sbjct: 291 LGSAPFLFLSLACARGSIVA---------------TYIFIFIGETLLSMNWAIVADILLY 335
Query: 414 ELI---QRSSEALATVTGIVDGSGSIGAAVGQYLVSLIRDKLGWMW 456
+I + ++EA V S +G A YL+ LI D+L W
Sbjct: 336 VVIPTRRSTAEAFQIVL-----SHLLGDAGSPYLIGLISDRLRRNW 376
>gi|215490096 spinster homolog 1 isoform 1 [Homo sapiens]
Length = 528
Score = 31.6 bits (70), Expect = 1.7
Identities = 85/406 (20%), Positives = 149/406 (36%), Gaps = 88/406 (21%)
Query: 85 GTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYNKWLY 144
G + T+F+ SY V + G +GDR N ++++ G+ +LV + ++ + WL
Sbjct: 98 GLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG----SSFIPGEHFWLL 153
Query: 145 CCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLASSV--LQ 202
+ G+ +++ ++ + F R + ++ VG+ LG S V +
Sbjct: 154 LLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMA 213
Query: 203 YGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDE 262
+ +A VT + +++F + P E S P +N
Sbjct: 214 GDWHWALRVTPGLGVVAVLLLFLVVREPPRGA----------VERHSDLPPLN------- 256
Query: 263 YEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYACLKLVNYSFFFWLPFYLSNNF- 321
S A ++A++ P + SL + + V S W P +L +
Sbjct: 257 --------PTSWWADLRALARN-----PSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRV 303
Query: 322 ----------GWKEAEADKL--SIWYDVGGIIGGTLQGFISDVLQK-------------- 355
G + +D L + + G++G L IS L+
Sbjct: 304 VLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCATGL 363
Query: 356 --RAPVLALSLLLAVGSLIGYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQ 413
AP L LSL A GS++ T FIG ++ AI AD+
Sbjct: 364 LGSAPFLFLSLACARGSIVA---------------TYIFIFIGETLLSMNWAIVADILLY 408
Query: 414 ELI---QRSSEALATVTGIVDGSGSIGAAVGQYLVSLIRDKLGWMW 456
+I + ++EA V S +G A YL+ LI D+L W
Sbjct: 409 VVIPTRRSTAEAFQIVL-----SHLLGDAGSPYLIGLISDRLRRNW 449
>gi|14042968 spinster homolog 1 isoform 1 [Homo sapiens]
Length = 528
Score = 31.6 bits (70), Expect = 1.7
Identities = 85/406 (20%), Positives = 149/406 (36%), Gaps = 88/406 (21%)
Query: 85 GTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYNKWLY 144
G + T+F+ SY V + G +GDR N ++++ G+ +LV + ++ + WL
Sbjct: 98 GLIQTVFISSYMVLAPVFGYLGDRYNRKYLMCGGIAFWSLVTLG----SSFIPGEHFWLL 153
Query: 145 CCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLASSV--LQ 202
+ G+ +++ ++ + F R + ++ VG+ LG S V +
Sbjct: 154 LLTRGLVGVGEASYSTIAPTLIADLFVADQRSRMLSIFYFAIPVGSGLGYIAGSKVKDMA 213
Query: 203 YGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIGLSGIEAEENFEEDSHRPLINGGENEDE 262
+ +A VT + +++F + P E S P +N
Sbjct: 214 GDWHWALRVTPGLGVVAVLLLFLVVREPPRGA----------VERHSDLPPLN------- 256
Query: 263 YEPNYSIQDDSSVAQVKAISFYQACCLPGVIPYSLAYACLKLVNYSFFFWLPFYLSNNF- 321
S A ++A++ P + SL + + V S W P +L +
Sbjct: 257 --------PTSWWADLRALARN-----PSFVLSSLGFTAVAFVTGSLALWAPAFLLRSRV 303
Query: 322 ----------GWKEAEADKL--SIWYDVGGIIGGTLQGFISDVLQK-------------- 355
G + +D L + + G++G L IS L+
Sbjct: 304 VLGETPPCLPGDSCSSSDSLIFGLITCLTGVLGVGLGVEISRRLRHSNPRADPLVCATGL 363
Query: 356 --RAPVLALSLLLAVGSLIGYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQ 413
AP L LSL A GS++ T FIG ++ AI AD+
Sbjct: 364 LGSAPFLFLSLACARGSIVA---------------TYIFIFIGETLLSMNWAIVADILLY 408
Query: 414 ELI---QRSSEALATVTGIVDGSGSIGAAVGQYLVSLIRDKLGWMW 456
+I + ++EA V S +G A YL+ LI D+L W
Sbjct: 409 VVIPTRRSTAEAFQIVL-----SHLLGDAGSPYLIGLISDRLRRNW 449
>gi|154350196 vesicular nucleotide transporter SLC17A9 [Homo
sapiens]
Length = 436
Score = 31.2 bits (69), Expect = 2.3
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 317 LSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRAPVL----ALSLLLAVGSLI 372
+S +FGW + EA + + G + + G + D + +L A + AV L+
Sbjct: 51 MSQDFGWNKKEAGIVLSSFFWGYCLTQVVGGHLGDRIGGEKVILLSASAWGSITAVTPLL 110
Query: 373 GYSRSPNDKSINALLMTVTGFFIGGPSNMISSAISADLGRQELIQRSSEALATVTGIVDG 432
+ S + MT + +G + A+++ L ++ R SE T + IV
Sbjct: 111 AHL-----SSAHLAFMTFSRILMGLLQGVYFPALTSLLSQKV---RESERAFTYS-IVGA 161
Query: 433 SGSIGAAVGQYLVSLIRDKLGWMWVFYF 460
G + + SL+ + GW +FYF
Sbjct: 162 GSQFGTLLTGAVGSLLLEWYGWQSIFYF 189
>gi|9945322 solute carrier family 17, member 7 [Homo sapiens]
Length = 560
Score = 30.8 bits (68), Expect = 3.0
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 176 GVVFGLWSACASVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSPEEIG 235
G+ G+ + V I+ + + ++Y FL+ + V + G VIF+G+ S E+
Sbjct: 439 GISNGVGTLSGMVCPIIVGAMTKHKTREEWQYVFLIASLVHYGG--VIFYGVFASGEK-- 494
Query: 236 LSGIEAEENFEED----SHRPLI--NGGENEDEYEP 265
E EE EE H L + E EDE EP
Sbjct: 495 QPWAEPEEMSEEKCGFVGHDQLAGSDDSEMEDEAEP 530
>gi|20336248 proprotein convertase subtilisin/kexin type 7
preproprotein [Homo sapiens]
Length = 785
Score = 30.8 bits (68), Expect = 3.0
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 396 GGPSNMISSAISADLGRQELIQRSSEALATVTGIVDGSGSIGAAVGQYL 444
GGPS + G +E +++ ++ALA G+V+ +G IG G YL
Sbjct: 50 GGPSWAVHLESLEGDGEEETLEQQADALAQAAGLVN-AGRIGELQGHYL 97
>gi|194239645 spinster homolog 3 [Homo sapiens]
Length = 512
Score = 30.8 bits (68), Expect = 3.0
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 85 GTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFGMCSSALVVFVFGALTEWLRFYNKWLY 144
G L T+F+ + + G +GDR + + +SFG+ L+ G + ++ WL+
Sbjct: 84 GLLQTVFVSCLLLSAPVFGYLGDRHSRKATMSFGI----LLWSGAGLSSSFISPRYSWLF 139
Query: 145 CCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSACASVGNILGACLASSV 200
+ G ++ V+G+ F + R V ++ VG+ LG L S+V
Sbjct: 140 FLSRGIVGTGSASYSTIAPTVLGDLFVRDQRTRVLAVFYIFIPVGSGLGYVLGSAV 195
>gi|7706117 solute carrier family 15, member 3 [Homo sapiens]
Length = 581
Score = 30.0 bits (66), Expect = 5.0
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 313 LPFYL-SNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQKRAPVLALSLL--LAVG 369
L YL S NF W +A + ++ + + + G+++DV R +ALSLL LA
Sbjct: 56 LVLYLNSTNFNWTGEQATRAALVFLGASYLLAPVGGWLADVYLGRYRAVALSLLLYLAAS 115
Query: 370 SLIGYSRSPNDKS 382
L+ + P+ +S
Sbjct: 116 GLLPATAFPDGRS 128
>gi|31377722 PERP, TP53 apoptosis effector [Homo sapiens]
Length = 193
Score = 29.6 bits (65), Expect = 6.6
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Query: 146 CLWIVNGLLQSTGWPCVVAVMGN-WFGKAGRGVVFGLWSACASVGNILGACL--ASSVLQ 202
C WI+ LL S ++A+ G W + G LW C+ G G+ S+++
Sbjct: 11 CRWILPLLLLSAIAFDIIALAGRGWLQSSDHGQTSSLWWKCSQEGGGSGSYEEGCQSLME 70
Query: 203 YGYEYAFLVTASVQFAGGIVIFFGLLVS 230
Y + A A++ F G I++ ++S
Sbjct: 71 YAWGRA---AAAMLFCGFIILVICFILS 95
>gi|8394395 taste receptor T2R16 [Homo sapiens]
Length = 291
Score = 29.6 bits (65), Expect = 6.6
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Query: 444 LVSLIRDKLGWMWVF----YFFILMTSCTIVFISPLIVR 478
++ + DK W+WV+ Y FILM S +++ SP + R
Sbjct: 247 IIGTLFDKRCWLWVWEAFVYAFILMHSTSLMLSSPTLKR 285
>gi|32455236 helicase (DNA) B [Homo sapiens]
Length = 1087
Score = 29.3 bits (64), Expect = 8.6
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 19/136 (13%)
Query: 240 EAEENFEEDSHRPLINGGENEDEYEPNYSIQDDSSVAQVKAISFYQACCL----PGVIPY 295
+A E+FE+D N E + ++ D ++ + +A L G+ Y
Sbjct: 502 KACEDFEQDQ-----NASEEWITFTEQSQLEADKAIEVLLTAPTGKAAGLLRQKTGLHAY 556
Query: 296 SLAYACLKLVNYSFFFWLPFYLSNNFGWKEAEADKLSIWYDVGGIIGGTLQGFISDVLQK 355
+L VNYSF+ W ++ N WK + L + D G ++ G VL
Sbjct: 557 TLCQ-----VNYSFYSWTQTMMTTNKPWKFSSVRVLVV--DEGSLVS---VGIFKSVLNL 606
Query: 356 RAPVLALSLLLAVGSL 371
LS L+ +G +
Sbjct: 607 LCEHSKLSKLIILGDI 622
>gi|40789261 solute carrier family 16, member 6 [Homo sapiens]
Length = 523
Score = 29.3 bits (64), Expect = 8.6
Identities = 35/165 (21%), Positives = 69/165 (41%), Gaps = 16/165 (9%)
Query: 71 NHLFPSAEKATLFLGTLDTIFLFSYAVGLFISGIVGDRLNLRWVLSFG--MCSSALVVFV 128
N L S ++ + + +I +F ++ ++ +R R V+ G + S+ +V
Sbjct: 50 NDLMDSFNESNSRISWIISICVFVLTFSAPLATVLSNRFGHRLVVMLGGLLVSTGMVAAS 109
Query: 129 FGALTEWLRFYNKWLYCCLWIVNGLLQSTGWPCVVAVMGNWFGKAGRGVVFGLWSA--CA 186
F + Y + I++GL + V ++ +FGK R +V + S C
Sbjct: 110 FSQEVSHM-------YVAIGIISGLGYCFSFLPTVTILSQYFGKR-RSIVTAVASTGECF 161
Query: 187 SVGNILGACLASSVLQYGYEYAFLVTASVQFAGGIVIFFGLLVSP 231
+V A +A + G+ Y+ L +Q ++ FG L+ P
Sbjct: 162 AVFAFAPAIMALKE-RIGWRYSLLFVGLLQLN---IVIFGALLRP 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.139 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,323,851
Number of Sequences: 37866
Number of extensions: 722247
Number of successful extensions: 2372
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2317
Number of HSP's gapped (non-prelim): 47
length of query: 494
length of database: 18,247,518
effective HSP length: 106
effective length of query: 388
effective length of database: 14,233,722
effective search space: 5522684136
effective search space used: 5522684136
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.