BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor
[Homo sapiens]
(92 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 191 1e-49
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 191 1e-49
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 184 1e-47
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 129 5e-31
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 129 5e-31
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 117 2e-27
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 94 2e-20
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 92 9e-20
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 87 2e-18
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 87 2e-18
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 83 5e-17
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 77 3e-15
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 77 4e-15
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 75 1e-14
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 73 6e-14
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 71 2e-13
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 69 6e-13
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 67 2e-12
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 65 1e-11
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 65 2e-11
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 63 6e-11
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 58 1e-09
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 58 2e-09
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 57 3e-09
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 50 3e-07
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 50 3e-07
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 48 1e-06
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 47 3e-06
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 46 6e-06
gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo sapiens] 45 1e-05
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 191 bits (484), Expect = 1e-49
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
Sbjct: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 191 bits (484), Expect = 1e-49
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
Sbjct: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
PAVVFQTKRGKQVCADPSESWVQEYVYDLELN
Sbjct: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 184 bits (468), Expect = 1e-47
Identities = 89/92 (96%), Positives = 90/92 (97%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
MKLCVTVLSLL+LVAAFCS ALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
Sbjct: 1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
PAVVFQTKR KQVCADPSESWVQEYVYDLELN
Sbjct: 61 PAVVFQTKRSKQVCADPSESWVQEYVYDLELN 92
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 129 bits (324), Expect = 5e-31
Identities = 55/92 (59%), Positives = 75/92 (81%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
M++ L++L+ A C+ LSAP+ +D PTACCFSYT+R++P+NF+ DY+ETSS CS+
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 60
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
P+V+F TKRG+QVCADPSE WVQ+YV DLEL+
Sbjct: 61 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELS 92
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 129 bits (324), Expect = 5e-31
Identities = 55/92 (59%), Positives = 75/92 (81%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
M++ L++L+ A C+ LSAP+ +D PTACCFSYT+R++P+NF+ DY+ETSS CS+
Sbjct: 1 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 60
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
P+V+F TKRG+QVCADPSE WVQ+YV DLEL+
Sbjct: 61 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELS 92
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 117 bits (294), Expect = 2e-27
Identities = 52/92 (56%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
M++ L++L+ A C+ SA + +D PTACCFSYT+R++P+NF+ DY+ETSS CS+
Sbjct: 1 MQVSTAALAVLLCTMALCN-QFSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK 59
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
P V+F TKR +QVCADPSE WVQ+YV DLEL+
Sbjct: 60 PGVIFLTKRSRQVCADPSEEWVQKYVSDLELS 91
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 94.0 bits (232), Expect = 2e-20
Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
MK+ L+++++ A C+ A ++P SD T CCF+Y AR LPR + +Y+ TS CS
Sbjct: 1 MKVSAAALAVILIATALCAPASASPYSSDT-TPCCFAYIARPLPRAHIKEYFYTSGKCSN 59
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
PAVVF T++ +QVCA+P + WV+EY+ LE++
Sbjct: 60 PAVVFVTRKNRQVCANPEKKWVREYINSLEMS 91
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 92.0 bits (227), Expect = 9e-20
Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1 MKLCVTVLSLLVLVA-AFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCS 59
MK+ V + +L+ A + S+ G P+ CCF+YT K+PR ++DYYET+S CS
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
Query: 60 QPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
+P +VF TKRG VC +PS+ WVQ+Y+ D++ N
Sbjct: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 87.4 bits (215), Expect = 2e-18
Identities = 34/62 (54%), Positives = 48/62 (77%)
Query: 31 PTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
P+ CCF+YT K+PR ++DYYET+S CS+P +VF TKRG VC +PS+ WVQ+Y+ D++
Sbjct: 48 PSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
Query: 91 LN 92
N
Sbjct: 108 EN 109
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 87.4 bits (215), Expect = 2e-18
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
MK L +LV A CS A +G++ CC YT+ ++P+ F+VDY ETS C +
Sbjct: 1 MKGLAAALLVLVCTMALCSCA---QVGTNKEL-CCLVYTSWQIPQKFIVDYSETSPQCPK 56
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
P V+ TKRG+Q+CADP++ WVQ+Y+ DL+LN
Sbjct: 57 PGVILLTKRGRQICADPNKKWVQKYISDLKLN 88
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 82.8 bits (203), Expect = 5e-17
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
MK+ +L LL++ AAF L+ P + P+ CCF+++++K+ + Y T+S C Q
Sbjct: 1 MKVSAVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCPQ 60
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYVYDL 89
AV+F+TK GK++CADP E WVQ Y+ L
Sbjct: 61 KAVIFRTKLGKEICADPKEKWVQNYMKHL 89
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 77.0 bits (188), Expect = 3e-15
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYET-SSLCS 59
MK +L LL+ AAF L+ P+G + T CC+ + +K+P+ + Y T SS C
Sbjct: 1 MKASAALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHCP 60
Query: 60 QPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
+ AV+F+TK K++CADP++ WVQ+++ L+
Sbjct: 61 REAVIFKTKLDKEICADPTQKWVQDFMKHLD 91
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
Length = 94
Score = 76.6 bits (187), Expect = 4e-15
Identities = 39/80 (48%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 8 LSLLVLVAAFCSLAL-SAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQ 66
L+ VL+A+ SL L +A GSD CCF Y+ + LP +V Y TS+ CSQ AV+F
Sbjct: 6 LASAVLLASLLSLHLGTATRGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFT 65
Query: 67 TKRGKQVCADPSESWVQEYV 86
TKRGK+VC P + WVQ+Y+
Sbjct: 66 TKRGKKVCTHPRKKWVQKYI 85
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 74.7 bits (182), Expect = 1e-14
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSD---PPTACCFSYTARKLPRNFVVDYYETSSL 57
MK+ LSLLVL+ S + S P + P+ CC Y + LPR VV Y + +
Sbjct: 1 MKVSEAALSLLVLILIITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN- 59
Query: 58 CSQPAVVFQTKRGKQVCADPSESWVQEYVYDLEL 91
C PA++F TKR ++VC +P++ WVQEY+ D L
Sbjct: 60 CHLPAIIFVTKRNREVCTNPNDDWVQEYIKDPNL 93
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 72.8 bits (177), Expect = 6e-14
Identities = 35/91 (38%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSL-CS 59
MK+ +L LL++ A F L+ P P CCF+ RK+P + Y +++ C
Sbjct: 1 MKVSAALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQCP 60
Query: 60 QPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
+ AV+F+TKRGK+VCADP E WV++ + L+
Sbjct: 61 KEAVIFKTKRGKEVCADPKERWVRDSMKHLD 91
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 71.2 bits (173), Expect = 2e-13
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYE-TSSLCS 59
MK+ +L LL++ AAF L+ P + PT CCF+ RK+P + Y TS C
Sbjct: 1 MKVSAALLWLLLIAAAFSPQGLAGP--ASVPTTCCFNLANRKIPLQRLESYRRITSGKCP 58
Query: 60 QPAVVFQTKRGKQVCADPSESWVQE 84
Q AV+F+TK K +CADP + WVQ+
Sbjct: 59 QKAVIFKTKLAKDICADPKKKWVQD 83
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 69.3 bits (168), Expect = 6e-13
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYE-TSSLCS 59
MK+ +L LL++ A F L+ P + P CC+++T RK+ + Y TSS C
Sbjct: 1 MKVSAALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKCP 60
Query: 60 QPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
+ AV+F+T K++CADP + WVQ+ + L+
Sbjct: 61 KEAVIFKTIVAKEICADPKQKWVQDSMDHLD 91
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 67.4 bits (163), Expect = 2e-12
Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 20/112 (17%)
Query: 1 MKLCVTVLSLLVLVAAFCS----------------LALSAPMGSDPPTA----CCFSYTA 40
MK+ V LS L+LV A S L L P+ D A CC SYT
Sbjct: 1 MKVSVAALSCLMLVTALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYTP 60
Query: 41 RKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
R +P + + Y+ET+S CS+P V+F TK+G++ CA+PS+ VQ V L+L+
Sbjct: 61 RSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 112
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 65.1 bits (157), Expect = 1e-11
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 34 CCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
CC SYT R +P + + Y+ET+S CS+P V+F TK+G++ CA+PS+ VQ V L+L+
Sbjct: 71 CCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLKLD 129
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 64.7 bits (156), Expect = 2e-11
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 19/109 (17%)
Query: 1 MKLCVTVLSLLVLVAAFCSLA----------LSAPMGSDPPTA---------CCFSYTAR 41
MK+ V LS L+LVA S A + + + + P CC SY ++
Sbjct: 1 MKVSVAALSCLMLVAVLGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYISQ 60
Query: 42 KLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
+P + + Y+ETSS CS+P V+F TK+G+QVCA PS VQ+ + L+
Sbjct: 61 SIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 62.8 bits (151), Expect = 6e-11
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 10 LLVLVAAFCSLALSA----PMGSDP-PTACCFSYTARKLPRNFVVDYYETS-SLCSQPAV 63
L+ +V + L + A P GS P+ CC + ++++P N VV Y +S S C + V
Sbjct: 4 LMTIVTSLLFLGVCAHHIIPTGSVVIPSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGV 63
Query: 64 VFQTKRGKQVCADPSESWVQEYVYDLE 90
+F TK+G+Q C DP + WVQ Y+ +L+
Sbjct: 64 IFTTKKGQQFCGDPKQEWVQRYMKNLD 90
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 58.2 bits (139), Expect = 1e-09
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 2 KLCVTVLSLLVLVAAFCSLALSAPMGSD-PPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
+L +L +LVL+A + P G++ + CC Y +LP V +Y TS C +
Sbjct: 3 RLQTALLVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSCPR 62
Query: 61 PAVVFQTKRGKQVCADPSESWVQ 83
P VV T R K++CADP WV+
Sbjct: 63 PGVVLLTFRDKEICADPRVPWVK 85
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 57.8 bits (138), Expect = 2e-09
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 1 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ 60
M++ T L L+L + S M P + CCFS+ +++P ++ Y TSS+CS
Sbjct: 1 MQIITTALVCLLLAGMWPEDVDSKSM-QVPFSRCCFSFAEQEIPLRAILCYRNTSSICSN 59
Query: 61 PAVVFQTKRGKQVCADPSESWVQEY 85
++F+ KRGK+ CA + WVQ +
Sbjct: 60 EGLIFKLKRGKEACALDTVGWVQRH 84
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 57.0 bits (136), Expect = 3e-09
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 8 LSLLVLVAAFCSLALSAPMGSDPPTA-CCFSYTARKLPRNFVVDY--YETSSLCSQPAVV 64
LSLL+LV AF + GSD CC Y+ RK+P V Y E S CS PA++
Sbjct: 7 LSLLILVLAF---GIPRTQGSDGGAQDCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAIL 63
Query: 65 FQTKRGKQ--VCADPSESWVQEYVYDLE 90
F ++ Q +CADP E WVQ+ + L+
Sbjct: 64 FLPRKRSQAELCADPKELWVQQLMQHLD 91
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 50.4 bits (119), Expect = 3e-07
Identities = 25/84 (29%), Positives = 45/84 (53%)
Query: 7 VLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQ 66
+L+L+ L+ + A G++ CC Y +P + +Y+TS CS+ A+VF
Sbjct: 6 MLALVTLLLGASLQHIHAARGTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFV 65
Query: 67 TKRGKQVCADPSESWVQEYVYDLE 90
T +G+ +C+DP+ V+ V L+
Sbjct: 66 TVQGRAICSDPNNKRVKNAVKYLQ 89
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 50.4 bits (119), Expect = 3e-07
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 8 LSLLVLVAAFCSLALSAPM--GSDPPTACCFSYTARKLP----RNFVVDYYETSSLCSQP 61
LSLLVL + AP G++ CC S T + +P RNF Y C P
Sbjct: 7 LSLLVLWTS------PAPTLSGTNDAEDCCLSVTQKPIPGYIVRNF--HYLLIKDGCRVP 58
Query: 62 AVVFQTKRGKQVCADPSESWVQEYVYDLE 90
AVVF T RG+Q+CA P + WV+ + L+
Sbjct: 59 AVVFTTLRGRQLCAPPDQPWVERIIQRLQ 87
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 48.1 bits (113), Expect = 1e-06
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 8 LSLLVLVAAFCSLALSAPMGSDPPTAC---CFSYTARKLPRNFVVDYYETSSLCSQPAVV 64
LS L+ +A FC L + T C C T+ K+P ++ Y + + C + A++
Sbjct: 6 LSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTS-KIPVALLIHYQQNQASCGKRAII 64
Query: 65 FQTKRGKQVCADPSESWVQEYVYDLE 90
+T++ + CADP E WV++ + L+
Sbjct: 65 LETRQHRLFCADPKEQWVKDAMQHLD 90
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 47.0 bits (110), Expect = 3e-06
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 10 LLVLVAAFCSLALSAPMG-----SDPPTACCFSYTARKLPRNFVVDYYETSSLCSQPAVV 64
L++ + CSL G SD T C S T ++LP + + Y T S AV+
Sbjct: 4 LILALLGICSLTAYIVEGVGSEVSDKRT--CVSLTTQRLPVSRIKTYTITEG--SLRAVI 59
Query: 65 FQTKRGKQVCADPSESWVQEYVYDLE 90
F TKRG +VCADP +WV++ V ++
Sbjct: 60 FITKRGLKVCADPQATWVRDVVRSMD 85
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 46.2 bits (108), Expect = 6e-06
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 10 LLVLVAAFCSLALSAPMGSDPPTA---CCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQ 66
L++ + CSL G + C S T ++LP + + Y T S AV+F
Sbjct: 4 LILALLGICSLTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEG--SLRAVIFI 61
Query: 67 TKRGKQVCADPSESWVQEYVYDLE 90
TKRG +VCADP +WV++ V ++
Sbjct: 62 TKRGLKVCADPQATWVRDVVRSMD 85
>gi|4759076 chemokine (C-C motif) ligand 20 isoform 1 [Homo
sapiens]
Length = 96
Score = 45.4 bits (106), Expect = 1e-05
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 3 LCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYE--TSSLCSQ 60
+C T LL + + L L + CC YT R L F+V + + C
Sbjct: 1 MCCTKSLLLAALMSVLLLHLCGESEAASNFDCCLGYTDRILHPKFIVGFTRQLANEGCDI 60
Query: 61 PAVVFQTKRGKQVCADPSESWVQEYV 86
A++F TK+ VCA+P ++WV+ V
Sbjct: 61 NAIIFHTKKKLSVCANPKQTWVKYIV 86
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.133 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,877,439
Number of Sequences: 37866
Number of extensions: 143887
Number of successful extensions: 494
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 442
Number of HSP's gapped (non-prelim): 43
length of query: 92
length of database: 18,247,518
effective HSP length: 63
effective length of query: 29
effective length of database: 15,861,960
effective search space: 459996840
effective search space used: 459996840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.