BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
(537 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 1066 0.0
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 1066 0.0
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 1066 0.0
gi|9506611 guanine nucleotide binding protein-like 3 (nucleolar)... 282 6e-76
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 171 1e-42
gi|93277113 GTP_binding protein [Homo sapiens] 61 2e-09
gi|223029424 large subunit GTPase 1 [Homo sapiens] 59 1e-08
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi... 51 3e-06
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 44 5e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 44 5e-04
gi|221219020 NYD-SP11 protein [Homo sapiens] 42 0.001
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 42 0.001
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 42 0.001
gi|148746195 trichohyalin [Homo sapiens] 42 0.001
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens] 41 0.002
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 41 0.003
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 41 0.003
gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo sa... 40 0.004
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 40 0.005
gi|88759339 aster-associated protein [Homo sapiens] 40 0.005
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 40 0.007
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 39 0.009
gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo sa... 39 0.012
gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo s... 39 0.012
gi|24308223 hypothetical protein LOC57577 [Homo sapiens] 39 0.012
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 39 0.016
gi|154354979 myosin X [Homo sapiens] 39 0.016
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 39 0.016
gi|16262452 cingulin [Homo sapiens] 38 0.020
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 38 0.020
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 1066 bits (2756), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 60
MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE
Sbjct: 1 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 60
Query: 61 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 120
ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ
Sbjct: 61 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 120
Query: 121 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 180
ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL
Sbjct: 121 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 180
Query: 181 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 240
NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS
Sbjct: 181 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 240
Query: 241 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 300
KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS
Sbjct: 241 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 300
Query: 301 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 360
PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR
Sbjct: 301 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 360
Query: 361 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 420
GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL
Sbjct: 361 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 420
Query: 421 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 480
EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ
Sbjct: 421 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 480
Query: 481 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 537
ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV
Sbjct: 481 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 537
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 1066 bits (2756), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 60
MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE
Sbjct: 1 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 60
Query: 61 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 120
ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ
Sbjct: 61 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 120
Query: 121 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 180
ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL
Sbjct: 121 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 180
Query: 181 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 240
NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS
Sbjct: 181 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 240
Query: 241 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 300
KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS
Sbjct: 241 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 300
Query: 301 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 360
PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR
Sbjct: 301 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 360
Query: 361 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 420
GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL
Sbjct: 361 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 420
Query: 421 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 480
EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ
Sbjct: 421 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 480
Query: 481 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 537
ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV
Sbjct: 481 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 537
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 1066 bits (2756), Expect = 0.0
Identities = 537/537 (100%), Positives = 537/537 (100%)
Query: 1 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 60
MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE
Sbjct: 13 MTCHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE 72
Query: 61 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 120
ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ
Sbjct: 73 ELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQ 132
Query: 121 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 180
ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL
Sbjct: 133 ELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWL 192
Query: 181 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 240
NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS
Sbjct: 193 NYLKKELPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCS 252
Query: 241 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 300
KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS
Sbjct: 253 KAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVS 312
Query: 301 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 360
PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR
Sbjct: 313 PLNSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRR 372
Query: 361 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 420
GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL
Sbjct: 373 GMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEEL 432
Query: 421 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 480
EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ
Sbjct: 433 EKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQ 492
Query: 481 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 537
ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV
Sbjct: 493 ETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRSFILDKIIEEDDAYDFSTDYV 549
>gi|9506611 guanine nucleotide binding protein-like 3
(nucleolar)-like [Homo sapiens]
Length = 582
Score = 282 bits (721), Expect = 6e-76
Identities = 162/425 (38%), Positives = 256/425 (60%), Gaps = 11/425 (2%)
Query: 17 HRKLR----KEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQK 72
H+K+ + AK+ G K K P P+ + REAEL+K+ +EE++++Q+ R++
Sbjct: 18 HKKISWPYPQPAKQNGKKATSKVPSAPHFVHPNDHANREAELKKKWVEEMREKQQAAREQ 77
Query: 73 ELEKKRKLETN-PDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASDV 131
E +K+R +E+ D+ E KE L + + + ++K Y +E +KV+E SDV
Sbjct: 78 ERQKRRTIESYCQDVLRRQEEFEHKEEVLQELNMFPQLDDEATRKAYYKEFRKVVEYSDV 137
Query: 132 VLEVLDARDPLGCRCPQVEEAIVQS-GQKKLVLILNKSDLVPKENLESWLNYLKKELPTV 190
+LEVLDARDPLGCRC Q+EEA++++ G KKLVL+LNK DLVPKE +E WL+YL+ ELPTV
Sbjct: 138 ILEVLDARDPLGCRCFQMEEAVLRAQGNKKLVLVLNKIDLVPKEVVEKWLDYLRNELPTV 197
Query: 191 VFRASTKPKDKGKITKRVKAKK-NAAPFRSEVCFGKEGLWKLLGGFQET--CSKAIRVGV 247
F+AST+ + K V + + + +S+ CFG E L ++LG + IRVGV
Sbjct: 198 AFKASTQHQVKNLNRCSVPVDQASESLLKSKACFGAENLMRVLGNYCRLGEVRTHIRVGV 257
Query: 248 IGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPLNSSSA 307
+G PNVGKSS+INSLK+ + C+VG G+T+ MQ V LDK I ++D+P + P NS
Sbjct: 258 VGLPNVGKSSLINSLKRSRACSVGAVPGITKFMQEVYLDKFIRLLDAPGIVPGP-NSEVG 316
Query: 308 LALRSPASIE-VVKPMEAASAILSQADARQVVLKYTVPGYRNSLEFFTVLAQRRGMHQKG 366
LR+ ++ + P+ IL + + ++ Y V G++ + F T +A R G +KG
Sbjct: 317 TILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGFQTTEHFLTAVAHRLGKKKKG 376
Query: 367 GIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVVDMKSGFNLEELEKNNAQ 426
G+ + E AAK + ++W +++Y PP + T P + + IV +M F++E+ E+ N
Sbjct: 377 GLYSQEQAAKAVLADWVSGKISFYIPPPATHTLPTHLSAEIVKEMTEVFDIEDTEQANED 436
Query: 427 SIRAI 431
++ +
Sbjct: 437 TMECL 441
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 171 bits (434), Expect = 1e-42
Identities = 122/421 (28%), Positives = 204/421 (48%), Gaps = 54/421 (12%)
Query: 102 KTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQ-KK 160
+ E + + K+ K EL KVI++SDVV++VLDARDP+G R P +E + + K
Sbjct: 190 RNEAQEEIYKKGQSKRIWGELYKVIDSSDVVVQVLDARDPMGTRSPHIETYLKKEKPWKH 249
Query: 161 LVLILNKSDLVPKENLESWLNYLKKELPTVVFRAS-TKPKDKGKITKRVKAKKNAAPFRS 219
L+ +LNK DLVP + W+ L ++ PT+ F AS T P KG + ++
Sbjct: 250 LIFVLNKCDLVPTWATKRWVAVLSQDYPTLAFHASLTNPFGKGAFIQLLRQ--------- 300
Query: 220 EVCFGKEGLWKLLGGFQETCSKAIRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRS 279
FGK T K I VG IG+PNVGKSS+IN+L+ +++CNV G T+
Sbjct: 301 ---FGK----------LHTDKKQISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETKV 347
Query: 280 MQVVPLDKQITIIDSPSFIVSPLNSSSALALRSPASIEVVK-PMEAASAILSQADARQVV 338
Q + L ++I +ID P + +S + + L+ +E +K P + A+L +A +
Sbjct: 348 WQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYIS 407
Query: 339 LKYTVPGYRNSLEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTS-- 396
Y + + N+ +F LA R G KGG P+++ K++ ++W + ++ PP +
Sbjct: 408 KTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPPNAEP 467
Query: 397 -WTPPPYFNESIVVDMKSGFN------------------LEELEKNN--------AQSIR 429
P + S+ V ++ N EE E+N+ Q +
Sbjct: 468 LVAPQLLPSSSLEVVPEAAQNNPGEEVTETAGEGSESIIKEETEENSHCDANTEMQQILT 527
Query: 430 AIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDE 489
++ +++ Q SG +E D+ EEL + ++EE+E +D +E+ E +E
Sbjct: 528 RVRQNFGKINVVPQFSGDDLVPVEVSDLEEELESFSDEEEEEQEQQRDDAEESSSEPEEE 587
Query: 490 N 490
N
Sbjct: 588 N 588
>gi|93277113 GTP_binding protein [Homo sapiens]
Length = 334
Score = 61.2 bits (147), Expect = 2e-09
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 29/194 (14%)
Query: 120 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESW 179
++++ ++ D ++EV DAR PL R P +E + G K +L+LNK DL +
Sbjct: 40 KKMQSSLKLVDCIIEVHDARIPLSGRNPLFQETL---GLKPHLLVLNKMDLADLTEQQKI 96
Query: 180 LNYLKKE-LPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQET 238
+ +L+ E L V+F K ++ +I V RS KE L E
Sbjct: 97 MQHLEGEGLKNVIFTNCVKDENVKQIIPMVTELIG----RSHRYHRKENL--------EY 144
Query: 239 CSKAIRVGVIGFPNVGKSSIINSLKQEQM-----CNVGVSMGLTRS-MQVVPLDKQ--IT 290
C + VIG PNVGKSS+INSL+++ + VG G+TR+ M + + ++ +
Sbjct: 145 C-----IMVIGVPNVGKSSLINSLRRQHLRKGKATRVGGEPGITRAVMSKIQVSERPLMF 199
Query: 291 IIDSPSFIVSPLNS 304
++D+P + + S
Sbjct: 200 LLDTPGVLAPRIES 213
>gi|223029424 large subunit GTPase 1 [Homo sapiens]
Length = 658
Score = 58.5 bits (140), Expect = 1e-08
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 60 EELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYC 119
EELKQ +K LE +R+L + + + P E+ +
Sbjct: 126 EELKQAEK---DNFLEWRRQLVRLEEEQKLILTPFERNLD------------------FW 164
Query: 120 QELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQ-SGQKKLVLILNKSDLVPKENLES 178
++L +VIE SD+V++++DAR+PL RC +E + + K+ V+++NK+DL+ E +
Sbjct: 165 RQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEMDANKENVILINKADLLTAEQRSA 224
Query: 179 WLNYLKKELPTVVF 192
W Y +KE V+F
Sbjct: 225 WAMYFEKEDVKVIF 238
Score = 55.1 bits (131), Expect = 2e-07
Identities = 47/225 (20%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 302
+ VG++G+PNVGKSS IN++ + +V + G T+ Q + ++ + + D P ++
Sbjct: 387 LTVGLVGYPNVGKSSTINTIMGNKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSF 446
Query: 303 NSSSA-LALRSPASIEVVKPMEAASAILSQADARQVV-----LKYTVPGYRN-------S 349
S+ A + I+ ++ +++ Q R V+ + P S
Sbjct: 447 VSTKAEMTCSGILPIDQMRDHVPPVSLVCQNIPRHVLEATYGINIITPREDEDPHRPPTS 506
Query: 350 LEFFTVLAQRRGMHQKGGIPNVEGAAKLLWSEWTGASLAYYCHPPTSWTPPPYFNESIVV 409
E T RG G P+ +A+ + ++ L YCHPP P + ++ +
Sbjct: 507 EELLTAYGYMRGFMTAHGQPDQPRSARYILKDYVSGKL-LYCHPPPGRDPVTFQHQHQRL 565
Query: 410 DMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSS---GLTNGI 451
+++ N +E++ ++ +A + ++ + F LT G+
Sbjct: 566 -LENKMNSDEIKMQLGRNKKAKQIENIVDKTFFHQENVRALTKGV 609
>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
Length = 607
Score = 50.8 bits (120), Expect = 3e-06
Identities = 69/281 (24%), Positives = 103/281 (36%), Gaps = 53/281 (18%)
Query: 243 IRVGVIGFPNVGKSSIINSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPL 302
+ +G +GFPNVGKSS+IN L ++ +V + G TR Q L + + D P I L
Sbjct: 361 VTIGCVGFPNVGKSSLINGLVGRKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIFPSL 420
Query: 303 NSSSALALRSPASIEVVKPMEAASAILSQADARQVVLKYTVPGYRN--------SLEFFT 354
L I ++ A L+ Q +L P + + +
Sbjct: 421 LPRQLQVLAGIYPIAQIQEPYTAVGYLASRIPVQALLHLRHPEAEDPSAEHPWCAWDICE 480
Query: 355 VLAQRRGMH-QKGGIPNVEGAAKLLWSEWTGASLAYYCHPP------TSWTPPPYFNESI 407
A++RG K +V AA L L+ HPP +W P E +
Sbjct: 481 AWAEKRGYKTAKAARNDVYRAANSLLRLAVDGRLSLCFHPPGYSEQKGTWESHPETTELV 540
Query: 408 VVDMKSGFNLEELEKNNAQSIRAIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKER 467
V+ + G +G EE++ EEL E
Sbjct: 541 VLQGRVG-----------------------------PAG-----DEEEEEEEELSSSCE- 565
Query: 468 KQEEREDDKDSDQE-TVDEEVDENSSGMFAAEETGEALSEE 507
EE E+D+D+D+E DEE ++ G A AL E
Sbjct: 566 --EEGEEDRDADEEGEGDEETPTSAPGSSLAGRNPYALLGE 604
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 43.5 bits (101), Expect = 5e-04
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
KR + +K+ +E K R++ KK K+ RK G KE RE E +++R ++
Sbjct: 78 KRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRR----ER 133
Query: 65 QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKK 124
++K R+K+ K+RK E + + +KE K E K K+ ++ +E KK
Sbjct: 134 KRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKK 193
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
++ K +KK RE ++ R+E KK KK RK+ N + R+ +K+R +E K+
Sbjct: 95 RKRKKEKKKRERKQRGRRERKK---KKERKERERENKQ--RRERKRKKRRKKKRRKERKR 149
Query: 65 QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
+++ +++ KKRK E + N + +KE + + K K+ +K
Sbjct: 150 EKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRK 201
Score = 40.4 bits (93), Expect = 0.004
Identities = 24/92 (26%), Positives = 44/92 (47%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
KR K +KK R RK KE KR K+ ++ + R+ E ++ E K+
Sbjct: 134 KRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKK 193
Query: 65 QQKLDRQKELEKKRKLETNPDIKPSNVEPMEK 96
++K +R+K+ E+K+ +T+ P+ +
Sbjct: 194 ERKKERRKKKERKKDRKTDRQTDSQVFRPLRE 225
Score = 38.9 bits (89), Expect = 0.012
Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEEL-- 62
+R + +KK R+ + K+ ++R KK RK KE RE + +K++ EE
Sbjct: 111 RRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREK 170
Query: 63 -KQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 97
+++ + +R+KE E+K + E + K + E++
Sbjct: 171 KRERNRKERKKERERKERRERKKERKKERRKKKERK 206
Score = 37.7 bits (86), Expect = 0.027
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQ------- 57
KR + +++ RE +K +K+ KKR K R+ KE +E RK+
Sbjct: 47 KREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRER 106
Query: 58 ----RLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQN 113
R E K++++ +R++E +++R+ + K + ++E K E K K K+
Sbjct: 107 KQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKE 166
Query: 114 SKK 116
++
Sbjct: 167 ERE 169
Score = 33.9 bits (76), Expect = 0.39
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
+R + +K+ RE ++ ++E K+ KK +K +E RK+R ++ K+
Sbjct: 39 ERREREKRKREREKERKRERGKKEKKKRKK----------RERGKERERKRKEREKQRKE 88
Query: 65 QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
+++ +R+K ++K+K E + +KE + ENK + ++ K+
Sbjct: 89 RREKERRKRKKEKKKRERKQ--RGRRERKKKKERKERERENKQRRERKRKKR 138
Score = 33.5 bits (75), Expect = 0.50
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 10 QKKVREHHRKL---RKEAKKRGHKKPRKDPGVPNSAPFKEAL-LREAELRKQRLEELKQQ 65
+K+ RE RK +KE KKR ++ K+ K+ RE E RK++ E+ K++
Sbjct: 46 RKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRE 105
Query: 66 QKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
+K ++E +KK++ + E K+ K + K K+ K+
Sbjct: 106 RKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKR 156
Score = 30.8 bits (68), Expect = 3.3
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 30/114 (26%)
Query: 3 CHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEEL 62
C +R +KK R +E +KR +K RK +E +E + RK+R E
Sbjct: 29 CTQRESERKKERRE-----REKRKREREKERK----------RERGKKEKKKRKKR-ERG 72
Query: 63 KQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
K++++ ++KE EK+RK E EKE K E K + KQ ++
Sbjct: 73 KERER--KRKEREKQRK------------ERREKERRKRKKEKKKRERKQRGRR 112
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 43.5 bits (101), Expect = 5e-04
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 15/201 (7%)
Query: 12 KVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQ 71
KV+E +K +E K K AP KEA + E +K+ E ++ K++ +
Sbjct: 834 KVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAK 893
Query: 72 K-ELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASD 130
K E E K+K+ T P+ VE E K + K + K+ +E K E +
Sbjct: 894 KEEAEDKKKVPTPEKEAPAKVEVKED----AKPKEKTEVAKKEPDDAKAKEPSKPAEKKE 949
Query: 131 VVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYLKKELPTV 190
E D ++ + P+ E+ ++ K+ L+K PK K E +
Sbjct: 950 AAPEKKDTKEE-KAKKPE-EKPKTEAKAKEDDKTLSKEPSKPKAE--------KAEKSSS 999
Query: 191 VFRASTKPKDKGKITKRVKAK 211
+ +KP +K K K K
Sbjct: 1000 TDQKDSKPPEKATEDKAAKGK 1020
Score = 30.0 bits (66), Expect = 5.6
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 7/103 (6%)
Query: 11 KKVREHHRKLRKEAKKRGHKKP-RKDPGVPNSAPFKEALLREAELRKQRLEELKQQQK-L 68
K+ E +K +AK + KP K P KE ++ E + + + K+ K L
Sbjct: 923 KEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTL 982
Query: 69 DRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGK 111
++ K K E + + +P EK TE+KA GK
Sbjct: 983 SKEPSKPKAEKAEKSSSTDQKDSKPPEKA-----TEDKAAKGK 1020
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 42.4 bits (98), Expect = 0.001
Identities = 66/313 (21%), Positives = 126/313 (40%), Gaps = 54/313 (17%)
Query: 21 RKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQKELEKKRKL 80
RKEAK RG K K + +E E E L+EL++Q+ L ++E E++ +
Sbjct: 2200 RKEAK-RGDKPKEKFSSQVDEVESEEHFSEEME---SLLDELEKQESLSSEEEEEREEEE 2255
Query: 81 ETNPD-IKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDAR 139
E + ++ E E+E G K K + K+ KK ++ K+ ++ + V E
Sbjct: 2256 EREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKK---EKKKEEVQEKEEVFE----- 2307
Query: 140 DPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYLKKELPTVVFRASTKPK 199
K +++ +E ES + ++E + + K
Sbjct: 2308 --------------------------EKEEIMSEEETESLSDEEEEEESCSLEEEVDREK 2341
Query: 200 DKGKITKRVKAKKNAAPFRSEVCFGKEGLWKLLGGFQETCSKAIRVGVIGFPNVGKSSII 259
+ K K+ K ++ R + G+E + +L G +AIR+GV+ P K +
Sbjct: 2342 EILKKEKQFKLQEQ----RRKSLRGRERVLSILRGVPHGKGRAIRLGVLKSPL--KKLMS 2395
Query: 260 NSLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSFIVSPLNSSSALALRSPASIEVV 319
+L+ ++ V V Q+ DK+ T+++ P + ++ + E +
Sbjct: 2396 TALEMKEKTPVPVP-----EKQISWEDKKATVVEIPRKFLGTMDKEREVM----GKYEPI 2446
Query: 320 KPMEAASAILSQA 332
P + + SQA
Sbjct: 2447 PPHVLGTVLESQA 2459
Score = 33.9 bits (76), Expect = 0.39
Identities = 56/253 (22%), Positives = 105/253 (41%), Gaps = 41/253 (16%)
Query: 12 KVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEEL-KQQQKLDR 70
K+ E +KL +E + ++ + A +E L++E E Q E++ +++++L R
Sbjct: 1741 KLVEEKKKLAEEEEALAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEEEERLGR 1800
Query: 71 QKE--LEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEA 128
++E +EKK KL + +++E + K K K KK QE +K+ +
Sbjct: 1801 KREQLIEKKMKLAQKRERWINSMEELTKN----KMILYQKKNLAQEKKNLAQEKEKLAQR 1856
Query: 129 SDVVL-----------EVLDARDPLGC---RCPQVEEAIVQ-------------SGQKKL 161
+ +L +++ ++ LG QVEE + Q +KKL
Sbjct: 1857 KENLLYNKERLTHSKKQLVQVKNKLGMFNKILAQVEEKLTQEKETVIKKKEKLAETEKKL 1916
Query: 162 VLILNKSDLVPKENLESWLNYLKKELPTVVFRASTKPKDKGKITKRVKA----KKNAAPF 217
V + D + K+ + +K L + + + + + I K KA K A
Sbjct: 1917 VQV---EDSLAKKQEKLAQEKMKLALEKAMVQGKKRLRGELDIAKEEKALNLEMKRLAEE 1973
Query: 218 RSEVCFGKEGLWK 230
+ + GKE L K
Sbjct: 1974 KMRLVEGKETLSK 1986
Score = 33.1 bits (74), Expect = 0.66
Identities = 18/75 (24%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Query: 453 EEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGE 512
EEK + +E ++K++K+E+++++ +E +E+ + +EE E+LS+E E
Sbjct: 2276 EEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEE------IMSEEETESLSDE----E 2325
Query: 513 QSTRSFILDKIIEED 527
+ S L++ ++ +
Sbjct: 2326 EEEESCSLEEEVDRE 2340
Score = 30.8 bits (68), Expect = 3.3
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 453 EEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSE-ETTAG 511
EE+++ EE +ERK+EE ++K ++E +++ + +E E E E
Sbjct: 2258 EEEEVREE---EEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQEKEEVFEEKEEIMS 2314
Query: 512 EQSTRSFILDKIIEEDDAYDFSTD 535
E+ T S ++ EE + + D
Sbjct: 2315 EEETESLSDEEEEEESCSLEEEVD 2338
Score = 30.4 bits (67), Expect = 4.3
Identities = 18/82 (21%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 453 EEKDIHEELPKRKE---RKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETT 509
E + + +EL K++ ++EERE++++ ++E V EE +E E+ E EE
Sbjct: 2229 EMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKK 2288
Query: 510 AGEQSTRSFILDKIIEEDDAYD 531
++ + +++ E+++ ++
Sbjct: 2289 KKKKEKKK---EEVQEKEEVFE 2307
Score = 29.6 bits (65), Expect = 7.3
Identities = 26/131 (19%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
+++ RE + R+E + R ++ RK+ ++ + +E E +K++ +E K+++ +
Sbjct: 2247 EEEEREEEEE-REEEEVREEEEERKE----EEEGEEKQVEKEEEEKKKKKKEKKKEEVQE 2301
Query: 70 RQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK----LYCQELKKV 125
+++ E+K ++ + + + + E E+E C E + K+ KK ++ +K
Sbjct: 2302 KEEVFEEKEEIMSEEETESLSDEEEEEE--SCSLEEEVDREKEILKKEKQFKLQEQRRKS 2359
Query: 126 IEASDVVLEVL 136
+ + VL +L
Sbjct: 2360 LRGRERVLSIL 2370
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 42.4 bits (98), Expect = 0.001
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 9 IQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKL 68
++K +E ++ +E++ +G ++ V KE + A Q LE+ + QK
Sbjct: 343 VEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKA 402
Query: 69 DRQK-ELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQN 113
D+ + +LE+++K+ET IK E E + + K E + KQ+
Sbjct: 403 DQDRLDLEERKKVETEAKIKQKLREIEENQKRIEKLEEYITTSKQS 448
Score = 29.3 bits (64), Expect = 9.5
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 34/150 (22%)
Query: 10 QKKVREHHRKLRKEAKKRG------------HKKPRKD-------PGVPNSAPFKEALLR 50
+ +V+++HR L++EA KR +K +D V A K+ L R
Sbjct: 369 ENQVKKYHR-LKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQKL-R 426
Query: 51 EAELRKQRLEELKQ-----QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTE- 104
E E ++R+E+L++ +Q L+ QK+LE +L ++ ++ + KE +
Sbjct: 427 EIEENQKRIEKLEEYITTSKQSLEEQKKLE--GELTEEVEMAKRRIDEINKELNQVMEQL 484
Query: 105 -----NKAKSGKQNSKKLYCQELKKVIEAS 129
++ +S +Q K + +K++ S
Sbjct: 485 GDARIDRQESSRQQRKAEIMESIKRLYPGS 514
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 42.0 bits (97), Expect = 0.001
Identities = 27/112 (24%), Positives = 52/112 (46%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
KR + +K+ + +K +E KKR +K K+ KE R ++ + E K+
Sbjct: 78 KRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKE 137
Query: 65 QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
++K + +KE E+K++ + + K+ G + E K K K+ K+
Sbjct: 138 ERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKR 189
Score = 40.4 bits (93), Expect = 0.004
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
++ K +KK ++ + KE K+R K+ RK KE +E E ++++ E KQ
Sbjct: 111 EKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQ 170
Query: 65 Q-QKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
+K + +KE E+K + + + K E KE K E K K ++ ++
Sbjct: 171 VGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQ 223
Score = 38.1 bits (87), Expect = 0.020
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGH------KKPRKDPGVPNSAPFKEALLREAELRKQR 58
+R K K+ E ++ +KE K+RG ++ RK+ +E E E ++R
Sbjct: 101 RREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERER 160
Query: 59 LEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
E K+++K +KE E+K K + N + +KE + + K K+ ++
Sbjct: 161 KERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEER 218
Score = 35.4 bits (80), Expect = 0.13
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 26/107 (24%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
Q ++RE R++ E +K G K+ RE+E +K+R E K
Sbjct: 35 QSEIREREREI--ETRKEGKKE------------------RESERKKERREREK------ 68
Query: 70 RQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
R++E EK+RK E K + E+E + E + K G++ K+
Sbjct: 69 RKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKR 115
Score = 35.0 bits (79), Expect = 0.17
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
+R + ++K RE ++ R++ ++R +K R+ V KE +E E RK+R + ++
Sbjct: 138 ERKREERKERERKKEEREKERERKERKKRERKQVGE----KEEERKEKE-RKERKK--RE 190
Query: 65 QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
+ + +R+KE E+K + E + K E++ + + GK+ K+
Sbjct: 191 RNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKE 242
Score = 31.6 bits (70), Expect = 1.9
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 11 KKVREHHRKLRK---EAKKRGHKKPRK-DPGVPNSAPFKEALLREAELRKQRLEELKQQQ 66
KK RE RK + E +KR +K RK + G ++ RE + R+ R +E K+ +
Sbjct: 52 KKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRR-REKENKEGE 110
Query: 67 KLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
+ +++K+ EKK + T+ + K E+E K E K + K+ +K
Sbjct: 111 EKEKRKKKEKKERGRTSKEGK-------ERE---RKEERKREERKERERK 150
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
+K+ R+ LRKE +K ++P++ + L R+ ELR++R EE +QQQ+L
Sbjct: 243 EKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQ-ELRRERQEEEQQQQRLR 301
Query: 70 RQKELEKKRKLE 81
R+++L +K++ E
Sbjct: 302 REQQLRRKQEEE 313
Score = 34.3 bits (77), Expect = 0.29
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRK----DPGVPNSAPFKEALLREAELRKQRLEELKQQ 65
++ +RE K R++ ++R ++K +K + + P K +E E + + EEL+Q+
Sbjct: 941 EQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRR-QEREKKYREEEELQQE 999
Query: 66 QKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKV 125
++ ++E EK+R+ E + + E+E L E + K Q ++ Y +E +
Sbjct: 1000 EEQLLREEREKRRRQEWERQYRKKDELQQEEEQLL--REEREKRRLQERERQYREEEELQ 1057
Query: 126 IEASDVVLEVLDAR 139
E ++ E + R
Sbjct: 1058 QEEEQLLGEERETR 1071
Score = 33.5 bits (75), Expect = 0.50
Identities = 15/83 (18%), Positives = 46/83 (55%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
+ ++++K E R+ ++E +++ ++ +++ ++ RE +LR+++ EE ++
Sbjct: 302 REQQLRRKQEEERREQQEERREQQERREQQEERREQQLRREQEERREQQLRREQEEERRE 361
Query: 65 QQKLDRQKELEKKRKLETNPDIK 87
QQ Q+E ++++L ++
Sbjct: 362 QQLRREQEEERREQQLRREQQLR 384
Score = 33.5 bits (75), Expect = 0.50
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 5 KRYKIQKKVREHHRKLRKEA--KKRGHKKPRKDPGVPNSAPFKEALLREAE--LRKQRLE 60
++Y+ +++V++ +L +E K+R + R+ +E LLRE + R++R
Sbjct: 1138 RQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEEELQQEEEQLLREEQEKRRQERER 1197
Query: 61 ELKQQQKLDRQKELEKKRKLETNPDIK 87
+ +++++L RQK ++ R + D+K
Sbjct: 1198 QYREEEELQRQKRKQRYRDEDQRSDLK 1224
Score = 33.1 bits (74), Expect = 0.66
Identities = 19/92 (20%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQ----RLEELKQQ 65
Q+ RE + R++ +R ++ R++ + ++ L RE +LR++ R ++L+++
Sbjct: 349 QQLRREQEEERREQQLRREQEEERREQQLRR----EQQLRREQQLRREQQLRREQQLRRE 404
Query: 66 QKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 97
Q+L R+++L ++++L ++ E ++
Sbjct: 405 QQLRREQQLRREQQLRREQQLRREQEEERHEQ 436
Score = 32.7 bits (73), Expect = 0.86
Identities = 20/83 (24%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 5 KRYKIQKKVREHHRKLRKEA--KKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEEL 62
++Y+ ++++++ +L +E K+R ++ R+ +E LLRE E K+R +EL
Sbjct: 1078 RQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLRE-EREKRRRQEL 1136
Query: 63 KQQQKLDRQKELEKKRKLETNPD 85
++Q + + + + E+++ L P+
Sbjct: 1137 ERQYREEEEVQQEEEQLLREEPE 1159
Score = 31.2 bits (69), Expect = 2.5
Identities = 32/156 (20%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLR---EAELRKQRLEELKQQQ 66
++ +RE K R + ++R +++ + +E R E E + ++ EEL+Q++
Sbjct: 1031 EQLLREEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEE 1090
Query: 67 KLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVI 126
+ ++E EK+R+ E + E +++E E + K +Q ++ Y +E +
Sbjct: 1091 EQLLREEPEKRRRQERERQCREE--EELQQEEEQLLREEREKRRRQELERQYREEEEVQQ 1148
Query: 127 EASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLV 162
E ++ E + R EE +Q +++L+
Sbjct: 1149 EEEQLLREEPEKRRRQELERQYREEEELQQEEEQLL 1184
Score = 31.2 bits (69), Expect = 2.5
Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 20/128 (15%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE-ELK 63
+R + +K RE ++LR++ ++R + L E +LR+Q LE + +
Sbjct: 1685 RRQERDRKFREEEQQLRRQERER------------------KFLQEEQQLRRQELERKFR 1726
Query: 64 QQQKLDRQKELEKKRKLETNPDI-KPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQEL 122
++++L ++ E E+ R+ E I + + P +E L + E K ++ + +E
Sbjct: 1727 EEEQLRQETEQEQLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQ 1786
Query: 123 KKVIEASD 130
+ + SD
Sbjct: 1787 QLRSQESD 1794
Score = 30.8 bits (68), Expect = 3.3
Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 8 KIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLRE--AELRKQRLEELKQQ 65
K +++ ++LR+E ++R ++ +++ ++ L RE E R+Q L E +Q+
Sbjct: 635 KSEEQEERRQQQLRREQQERREQRLKREE---EEERLEQRLKREHEEERREQELAEEEQE 691
Query: 66 QKLDRQKELEKK--RKLETNPDIKPSNV--EPMEKEFGLCKTENKAKSGKQNSKKLYCQE 121
Q +R K K +LE+ D + S V P ++E + E + K ++ S+ + +E
Sbjct: 692 QARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESELQWQEE 751
Score = 30.4 bits (67), Expect = 4.3
Identities = 20/103 (19%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
Q++++E +LRK ++ ++ +++ ++ L RE +LR+++ EE ++QQ+ +
Sbjct: 268 QRELQEEEEQLRKLERQELRRERQEEEQQ------QQRLRREQQLRRKQEEERREQQE-E 320
Query: 70 RQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQ 112
R+++ E++ + E + + + +E L + + + + +Q
Sbjct: 321 RREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQ 363
Score = 30.4 bits (67), Expect = 4.3
Identities = 18/70 (25%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 18 RKLRKEAKKRGHKKPRKDPGVPNSAPFK--EALLREAELRKQRLEELKQQQKLDRQKELE 75
++LR+E + R ++ R++ + + + L RE +LR+++ EE +Q+ ++E
Sbjct: 387 QQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQR 446
Query: 76 KKRKLETNPD 85
KR+ E D
Sbjct: 447 LKREQEERRD 456
Score = 30.4 bits (67), Expect = 4.3
Identities = 24/117 (20%), Positives = 55/117 (47%), Gaps = 12/117 (10%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
+R + +++ + H + R+E + + ++ R+D L RE E + E KQ
Sbjct: 426 RREQEEERHEQKHEQERREQRLKREQEERRD-----------WLKREEETERHEQERRKQ 474
Query: 65 QQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQE 121
Q K D+++E ++R L+ + + E E++ + E + + K+ ++ Q+
Sbjct: 475 QLKRDQEEE-RRERWLKLEEEERREQQERREQQLRREQEERREQRLKRQEEEERLQQ 530
Score = 30.0 bits (66), Expect = 5.6
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLE-ELK 63
+R + Q++ ++ +L +E K+R H K P + ++ LL+E E QR E E +
Sbjct: 863 RRSQEQRRDQKWRWQLEEERKRRRHTLYAK-PALQEQLRKEQQLLQEEEEELQREEREKR 921
Query: 64 QQQKLDRQ----------------KELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKA 107
++Q+ +RQ +E EK+R+ E + ++E L E
Sbjct: 922 RRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLL--GEEPE 979
Query: 108 KSGKQNSKKLYCQELKKVIEASDVVLEVLDAR 139
K +Q +K Y +E + E ++ E + R
Sbjct: 980 KRRRQEREKKYREEEELQQEEEQLLREEREKR 1011
Score = 30.0 bits (66), Expect = 5.6
Identities = 18/77 (23%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 5 KRYKIQKKVR-EHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELK 63
K+Y+ +++++ E + LR+E +KR ++ + + +E L E K+RL+E +
Sbjct: 988 KKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDELQQEEEQLLREEREKRRLQERE 1047
Query: 64 QQQKLDRQKELEKKRKL 80
+Q + + + + E+++ L
Sbjct: 1048 RQYREEEELQQEEEQLL 1064
Score = 30.0 bits (66), Expect = 5.6
Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 9 IQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQK- 67
+Q + E + R++ ++R ++ R P +E L RE + +R + Q++K
Sbjct: 1267 LQHLLGEQQERDREQERRRWQQRDRHFPE-------EEQLEREEQKEAKRRDRKSQEEKQ 1319
Query: 68 LDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELK 123
L R++ EK+R+ ET+ + E+E L + E + ++ +K +EL+
Sbjct: 1320 LLREEREEKRRRQETDRKFR-------EEEQLLQEREEQPLRRQERDRKFREEELR 1368
Score = 29.6 bits (65), Expect = 7.3
Identities = 22/106 (20%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 14 REHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQKE 73
RE ++L +E +++ K+ +++ ++ LL+ E R+Q+ + +Q+++L+++ +
Sbjct: 552 REEEKRLEQERREQRLKREQEER--------RDQLLKREEERRQQRLKREQEERLEQRLK 603
Query: 74 LEKKRKLETNP--DIKPSNVEP-MEKEFGLCKTENKAKSGKQNSKK 116
E+ +LE + + EP E+ L K+E + + +Q ++
Sbjct: 604 REEVERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRR 649
Score = 29.3 bits (64), Expect = 9.5
Identities = 24/103 (23%), Positives = 51/103 (49%), Gaps = 13/103 (12%)
Query: 8 KIQKKVREHHRKLRKEAKKRGHKKPRKDPGVP-------NSAPFKEALLR--EAELRKQR 58
K +++ H ++ RK+ KR ++ R++ + +E LR + E R+QR
Sbjct: 459 KREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQR 518
Query: 59 L----EELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 97
L EE + QQ+L +++L ++++ +K + +E+E
Sbjct: 519 LKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQE 561
Score = 29.3 bits (64), Expect = 9.5
Identities = 20/95 (21%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 3 CHKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEEL 62
C + ++Q+ E + LR+E +KR ++ + +E L E K+R +EL
Sbjct: 1110 CREEEELQQ---EEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQEL 1166
Query: 63 KQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKE 97
++Q + + + + E+++ L + + E +E
Sbjct: 1167 ERQYREEEELQQEEEQLLREEQEKRRQERERQYRE 1201
Score = 29.3 bits (64), Expect = 9.5
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
Q + +E +RK+ +E + R ++ ++ F+E E +LR++R E+ + Q+ D
Sbjct: 1739 QLRRQERYRKILEEEQLRPEREEQQLRRQERDRKFRE----EEQLRQEREEQQLRSQESD 1794
Query: 70 RQ-KELEKKRKLETNPDIKP 88
R+ +E E+ R+ ++P
Sbjct: 1795 RKFREEEQLRQEREEQQLRP 1814
>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
Length = 1012
Score = 41.2 bits (95), Expect = 0.002
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
QK++ E + + ++ ++ R++ N E RE E Q + +++ K+
Sbjct: 870 QKQIEEQKEEEKIREQQVKERRQREERRQSNLQEVLERERRELEKLYQERKMIEESLKIK 929
Query: 70 RQKELEKKRKLE-TNPDIKPSNVE---PMEKEFGLCKTENKAKSGKQNSKKLYCQ-ELKK 124
+KELE + +LE +N +IK + P+EK + + E +S ++SKK+ + L
Sbjct: 930 IKKELEMENELEMSNQEIKDKSAHSENPLEKYMKIIQQEQDQESADKSSKKMVQEGSLVD 989
Query: 125 VIEASDVV 132
+++SD V
Sbjct: 990 TLQSSDKV 997
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 40.8 bits (94), Expect = 0.003
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 49/207 (23%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVP-NSAPFKEALLREAELRKQRLEELKQQQKL 68
++K + K++ E KK +KP+K+ + P K+ K + EE+K++ K
Sbjct: 634 KEKTVKKETKVKPEDKKEEKEKPKKEVAKKEDKTPIKKE-------EKPKKEEVKKEVKK 686
Query: 69 DRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEA 128
+ +KE +K+ K E + P V+ K K E K ++ K ++L K +
Sbjct: 687 EIKKEEKKEPKKEVKKETPPKEVKKEVK-----KEEKKEVKKEEKEPKKEIKKLPKDAKK 741
Query: 129 SDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYLKKELP 188
S L L + P+ EE++ K D V
Sbjct: 742 SSTPLSEAKKPAALKPKVPKKEESV-------------KKDSV----------------- 771
Query: 189 TVVFRASTKPKDKGKITKRVKAKKNAA 215
A+ KPK+KGKI K +K + AA
Sbjct: 772 -----AAGKPKEKGKI-KVIKKEGKAA 792
Score = 38.1 bits (87), Expect = 0.020
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 9 IQKKVREHHRKLRKEAKKRGHKKPRKDP--GVPNSAPFKEALLREAELRKQRLEELKQQQ 66
I+K+ + +++KE KK K+ +K+P V P KE + E++K+ +E+K+++
Sbjct: 669 IKKEEKPKKEEVKKEVKKEIKKEEKKEPKKEVKKETPPKEV---KKEVKKEEKKEVKKEE 725
Query: 67 KLDRQ--KELEKKRKLETNP---DIKPSNVEPM--EKEFGLCKTENKAKSGKQNSKKLYC 119
K ++ K+L K K + P KP+ ++P +KE + K A K+ K
Sbjct: 726 KEPKKEIKKLPKDAKKSSTPLSEAKKPAALKPKVPKKEESVKKDSVAAGKPKEKGKIKVI 785
Query: 120 QELKKVIEA 128
++ K EA
Sbjct: 786 KKEGKAAEA 794
Score = 32.0 bits (71), Expect = 1.5
Identities = 43/209 (20%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 19 KLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQKELEKKR 78
KL++ A R KP P +P+ + KE+ E+ K + +++ K++ ++++ K+
Sbjct: 534 KLKQRADSRESLKPAAKP-LPSKSVRKESKEETPEVTK--VNHVEKPPKVESKEKVMVKK 590
Query: 79 ----KLETNPDIK----PSNVEPMEKEFGLCK---TENKAKSGKQNS----KKLYCQELK 123
K ET P + PS EP + + + T+ K K+ K+ + K+ ++ K
Sbjct: 591 DKPIKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKPEDKK 650
Query: 124 KVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYL 183
+ E + + + P+ +E + + +K+ + KE + +
Sbjct: 651 EEKEKPKKEVAKKEDKTPIKKEEKPKKEEVKKEVKKE----------IKKEEKKEPKKEV 700
Query: 184 KKELPTVVFRASTKPKDKGKITKRVKAKK 212
KKE P + K ++K ++ K K K
Sbjct: 701 KKETPPKEVKKEVKKEEKKEVKKEEKEPK 729
Score = 31.6 bits (70), Expect = 1.9
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 9 IQKKVREHHRKLRKEAKKRGHKKPRKDPGV--PNSAPFKEALLREAELRKQRLEELKQQQ 66
++K ++E + + K + +K G P +A K A L+E+ + R+ K+++
Sbjct: 2235 LKKDLKEKTKTKKPGTKTKSSSPVKKSDGKSKPLAASPKPAGLKESSDKVSRVASPKKKE 2294
Query: 67 KLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
+ EK K T P++K + E +KE T+N A + S K
Sbjct: 2295 SV------EKAAKPTTTPEVKAARGEEKDKE-----TKNAANASASKSAK 2333
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 40.8 bits (94), Expect = 0.003
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 452 IEEKDIHEEL---PKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEET 508
+E +H E+ P+ +E ++EE E+D++S++E +E E S G +E E +S+E
Sbjct: 518 VEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEG----DEEDEKVSDEK 573
Query: 509 TAGEQSTRSFILDKIIEEDDAYDFSTD 535
+G+ + K + D YD D
Sbjct: 574 DSGKTLDKK--PSKEMSSDSEYDSDDD 598
Score = 39.3 bits (90), Expect = 0.009
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 12/131 (9%)
Query: 14 REHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL--LREAELRKQRLEELKQQQKLDRQ 71
++ +K +K K+ K+ +K P +EAL L+E E R++R EE +++ R
Sbjct: 314 KKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEERQKREEE----ERIKRL 369
Query: 72 KELEKKRK----LETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIE 127
+ELE KRK LE + E KE K E K + Q + + K+++
Sbjct: 370 EELEAKRKEEERLEQEKRERKKQKEKERKE--RLKKEGKLLTKSQREARARAEATLKLLQ 427
Query: 128 ASDVVLEVLDA 138
A V + D+
Sbjct: 428 AQGVEVPSKDS 438
Score = 30.4 bits (67), Expect = 4.3
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 453 EEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGE 512
EE++ EE + +E ++EE E + E ++ DE SG ++ + +S ++
Sbjct: 536 EEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSDSEYDS 595
Query: 513 QSTRSFILDKIIEEDDAYD 531
R+ +E+ AYD
Sbjct: 596 DDDRT-------KEERAYD 607
>gi|222446603 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 668
Score = 40.4 bits (93), Expect = 0.004
Identities = 29/131 (22%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
K ++ ++K+RE K+R++ KK ++ + ++ +RE E R+++ E +Q
Sbjct: 417 KMWRQEEKIREQEEKIREQEKKMWRQEEKIH---------EQEKIREEEKRQEQEEMWRQ 467
Query: 65 QQKLDRQKEL-EKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELK 123
++K+ Q+E+ +K K+ I+ + +E + E K ++ +K++ QE +
Sbjct: 468 EEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEKMHDQEEKI---REQEEKMWRQE-E 523
Query: 124 KVIEASDVVLE 134
K+ E + + E
Sbjct: 524 KIREQEEKIRE 534
Score = 39.7 bits (91), Expect = 0.007
Identities = 27/133 (20%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
K ++ ++K+RE K+R++ +K ++ +E + + ++R+Q + +Q
Sbjct: 517 KMWRQEEKIREQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMQEQEKMRRQEEKIREQ 576
Query: 65 QQKLDRQKE---------LEKKRKLETNPDIKPSNVEPM-EKEFGLCKTENKAKSG---- 110
++K+ QKE E++ K+ ++ E M E+E +C+ E K +
Sbjct: 577 EEKIREQKEKIREQEEKIWEQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKM 636
Query: 111 KQNSKKLYCQELK 123
++ +K++ QE++
Sbjct: 637 RRQEEKMWEQEVR 649
Score = 32.7 bits (73), Expect = 0.86
Identities = 22/116 (18%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
Q+K+RE K ++E K R +K R++ ++ +E ++R+Q + +Q++K+
Sbjct: 389 QEKIREQEEKRQEEEKIREQEK-RQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEKIH 447
Query: 70 RQKELEKKRKLETNPDI--KPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELK 123
Q+++ ++ K + ++ + + E+ + + ++ + ++ +K++ QE K
Sbjct: 448 EQEKIREEEKRQEQEEMWRQEEKIREQEEIWRQKEKMHEQEKIRKQEEKVWRQEEK 503
Score = 30.0 bits (66), Expect = 5.6
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 453 EEKDIHEELPKRKERKQEE-----REDDKDSDQETVDEEVDENSSGMFAAEE---TGEAL 504
EEK EE + +E++QE+ R+++K +QE E++ E M+ EE E +
Sbjct: 396 EEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQE---EKIREQEKKMWRQEEKIHEQEKI 452
Query: 505 SEETTAGEQSTRSFILDKIIEEDDAY 530
EE EQ +KI E+++ +
Sbjct: 453 REEEKRQEQEEMWRQEEKIREQEEIW 478
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 430 AIKGPHLANSILFQSSGLTNGIIEEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDE 489
A GP + ++G ++ EE+++ ELP+ + E+ +DD+D D E DE+ D+
Sbjct: 1655 AAPGPREGAAAAAAAAGESSQEDEEEEL--ELPEEEAEDDEDEDDDEDDDDEDDDEDDDD 1712
Query: 490 NSSGMFAAEETGEALSEETTAGEQS 514
+ E EA +E AG ++
Sbjct: 1713 EDLRTDSEESLPEAAAEAAGAGART 1737
>gi|88759339 aster-associated protein [Homo sapiens]
Length = 647
Score = 40.0 bits (92), Expect = 0.005
Identities = 34/125 (27%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 7 YKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQ 66
++ K ++E K + AKKR +K +K N+A EAL + +++++E LK++
Sbjct: 473 FEAWKAMKEKEAK-KIAAKKRLEEKNKKKTEEENAARKGEALQAFEKWKEKKMEYLKEKN 531
Query: 67 KLDRQKELEKKRK-LETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKV 125
+ +R+ E KK+K ET + K N+ +EK E K KQ K+ ++ K+
Sbjct: 532 RKEREYERAKKQKEEETVAEKKKDNLTAVEK-----WNEKKEAFFKQKEKEKINEKRKEE 586
Query: 126 IEASD 130
++ ++
Sbjct: 587 LKRAE 591
>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
sapiens]
Length = 750
Score = 39.7 bits (91), Expect = 0.007
Identities = 27/121 (22%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
K ++ ++K+RE K+R++ KK ++ + ++ +RE E R+++ E +Q
Sbjct: 431 KMWRQEEKIREQEEKIREQEKKMWRQEEKIH---------EQEKIREEEKRQEQEEMWRQ 481
Query: 65 QQKLDRQKEL--EKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQEL 122
++K+ Q+E+ +K++ E I+ + +E + + E K ++ +K++ QE
Sbjct: 482 EEKIHEQEEIWRQKEKMHEQEEKIRKQEEKVWRQEEKIREQEEKI---REQEEKMWRQEE 538
Query: 123 K 123
K
Sbjct: 539 K 539
Score = 34.3 bits (77), Expect = 0.29
Identities = 23/119 (19%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
++K+RE K+R++ + ++ + +E + + E ++ E++++Q+K
Sbjct: 625 EEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMWRQEEKIREQEKKI 684
Query: 70 RQKELEKKRKLETNPDIKPSNVEPM-EKEFGLCKTENKAKSG----KQNSKKLYCQELK 123
R++E K+ ++ E M E+E +C+ E K + ++ +K++ QE++
Sbjct: 685 REQE----EKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVR 739
Score = 33.5 bits (75), Expect = 0.50
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 15/141 (10%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKK---PRKDPGVPNSAPFKEALLREAELRKQRLEE 61
K ++ ++K+RE R+E K +K K + +E +RE E + R EE
Sbjct: 532 KMWRQEEKIREQEEMWREEEKMHEQEKIWEEEKRQEQEDKMWRQEEKIREQEEKVWRQEE 591
Query: 62 LKQQQKLDRQKELEKKRKLETNPDIKPSNVEPME----------KEFGLCKTENKAKSGK 111
++Q+ RQ++ EK K E + ++ E +E E + K G+
Sbjct: 592 KIREQEEKRQEQEEKMWKQEEKIREQEEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGE 651
Query: 112 QNSKKLYCQELKKVIEASDVV 132
Q K C++ +K+ E + +
Sbjct: 652 QEEK--MCEQEEKMQEQEETM 670
Score = 31.6 bits (70), Expect = 1.9
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
Q+K+RE K ++E K R +K R++ ++ +E ++R+Q + +Q++K+
Sbjct: 403 QEKIREQEEKRQEEEKIREQEK-RQEQEAKMWRQEEKIREQEEKIREQEKKMWRQEEKIH 461
Query: 70 RQKELEKKRKLETNPDI 86
Q+++ ++ K + ++
Sbjct: 462 EQEKIREEEKRQEQEEM 478
Score = 30.0 bits (66), Expect = 5.6
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 453 EEKDIHEELPKRKERKQEE-----REDDKDSDQETVDEEVDENSSGMFAAEE---TGEAL 504
EEK EE + +E++QE+ R+++K +QE E++ E M+ EE E +
Sbjct: 410 EEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQE---EKIREQEKKMWRQEEKIHEQEKI 466
Query: 505 SEETTAGEQSTRSFILDKIIEEDDAY 530
EE EQ +KI E+++ +
Sbjct: 467 REEEKRQEQEEMWRQEEKIHEQEEIW 492
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 39.3 bits (90), Expect = 0.009
Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 33/229 (14%)
Query: 4 HKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNS---------APFKEALLREAEL 54
H++ + + K R + R EA++R K +D + + A +E REAE
Sbjct: 254 HEKMEEEDKERAEAERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQERERREAEE 313
Query: 55 RKQRLEELKQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNS 114
R++ EE K+ + ++ + E+KR E IK E+ + + E +A +Q +
Sbjct: 314 RERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRA 373
Query: 115 KKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKE 174
+ +E KV E R Q+EE + K+ K + V ++
Sbjct: 374 RAEE-EEKAKVEEQK---------------RNKQLEEKKHAMQETKI-----KGEKVEQK 412
Query: 175 NLESWLNYLKKE---LPTVVFRASTKPKDKGKITKRVKAKKNAAPFRSE 220
W+N K + L T V + + K KR K +++ F+ E
Sbjct: 413 IEGKWVNEKKAQEDKLQTAVLKKQGEEKGTKVQAKREKLQEDKPTFKKE 461
Score = 33.5 bits (75), Expect = 0.50
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 23/175 (13%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
+K+ E +++++E K+ ++ R +A ++ E E K ++EE K
Sbjct: 335 EKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEE-EKAKVEEQK------ 387
Query: 70 RQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEAS 129
R K+LE+K+ IK VE +K G E KA+ KL LKK +
Sbjct: 388 RNKQLEEKKHAMQETKIKGEKVE--QKIEGKWVNEKKAQ-----EDKLQTAVLKK--QGE 438
Query: 130 DVVLEVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSDLVPKENLESWLNYLK 184
+ +V R+ L P ++ ++ +K+ K D PKE ++S+++ K
Sbjct: 439 EKGTKVQAKREKLQEDKPTFKKEEIK--DEKI-----KKDKEPKEEVKSFMDRKK 486
Score = 32.0 bits (71), Expect = 1.5
Identities = 41/197 (20%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAP--------------------FKEALL 49
+++ R+ + ++E + G + + NS P F E L
Sbjct: 42 RRRARQERLRQKQEEESLGQVTDQVEVNAQNSVPDEEAKTTTTNTQVEGDDEAAFLERLA 101
Query: 50 REAELRKQRLEELKQQQK------LDRQKELEKKR----KLETNPDIKPSNVEPMEKEFG 99
R E R++RL+E ++QK D L +R E K E ++ +
Sbjct: 102 RREERRQKRLQEALERQKEFDPTITDASLSLPSRRMQNDTAENETTEKEEKSESRQERYE 161
Query: 100 LCKTENKAKSGKQNSKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQ--VEEAIVQSG 157
+ +TE KS ++N + +E KK + + E R +G + VEE +S
Sbjct: 162 IEETETVTKSYQKNDWR-DAEENKKEDKEKEEEEEEKPKRGSIGENQVEVMVEEKTTESQ 220
Query: 158 QKKLVLILNKSDLVPKE 174
++ +V+ L + +E
Sbjct: 221 EETVVMSLKNGQISSEE 237
Score = 29.6 bits (65), Expect = 7.3
Identities = 17/64 (26%), Positives = 29/64 (45%)
Query: 454 EKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQ 513
E + E + + ++R EER+ K+ ++ +E AAEE EE A E+
Sbjct: 310 EAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEE 369
Query: 514 STRS 517
R+
Sbjct: 370 RQRA 373
Score = 29.3 bits (64), Expect = 9.5
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Query: 453 EEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGE 512
EEK +E R+ R+ EERE ++ ++ +E AAEE EE A E
Sbjct: 298 EEKAAAQE---RERREAEERERMREEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAE 354
Query: 513 QSTR 516
+ R
Sbjct: 355 ERQR 358
>gi|94680976 coiled-coil domain containing 112 isoform 1 [Homo
sapiens]
Length = 529
Score = 38.9 bits (89), Expect = 0.012
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 7 YKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQ 66
Y QKK +E +L KE +++ K ++ + F+E L + EL K + K+ +
Sbjct: 404 YTQQKKEQEEFLRLEKEIREKAEKAEKRKNAADEISRFQERDLHKLEL-KILDRQAKEDE 462
Query: 67 KLDRQKELEK-KRKLETNPDIKPSNV 91
K +Q+ L K K K+E N PS +
Sbjct: 463 KSQKQRRLAKLKEKVENNVSRDPSRL 488
>gi|145580595 coiled-coil domain containing 112 isoform 2 [Homo
sapiens]
Length = 446
Score = 38.9 bits (89), Expect = 0.012
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 7 YKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQ 66
Y QKK +E +L KE +++ K ++ + F+E L + EL K + K+ +
Sbjct: 321 YTQQKKEQEEFLRLEKEIREKAEKAEKRKNAADEISRFQERDLHKLEL-KILDRQAKEDE 379
Query: 67 KLDRQKELEK-KRKLETNPDIKPSNV 91
K +Q+ L K K K+E N PS +
Sbjct: 380 KSQKQRRLAKLKEKVENNVSRDPSRL 405
>gi|24308223 hypothetical protein LOC57577 [Homo sapiens]
Length = 936
Score = 38.9 bits (89), Expect = 0.012
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 14 REHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQKE 73
R R++ E KK K ++ A +E REAE ++ +LE +++++L + KE
Sbjct: 668 RAECRRILAEKKK----KQEEEKLAQLKAQEEERQKREAEEKEAQLERKREEKRLKKMKE 723
Query: 74 LEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKKVIEASDVVL 133
LEK+++++ N ++ E E+ K G + K+L Q + + A +
Sbjct: 724 LEKQKRIKRNQQLEAIAKEHYERVL-------LRKKGLEPWKRLRMQSKQNIQVAEEHYS 776
Query: 134 EVLDARDPLGCRCPQVEEAIVQSGQKKLVLILNKSD-----LVPKENLESWLNYL 183
L + L Q Q+ L + ++D ++ K ++SWL Y+
Sbjct: 777 LFLQRKYML---------TWFQRSQESLARKMAQADQFYSQILLKRVIQSWLQYV 822
Score = 29.3 bits (64), Expect = 9.5
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 7/62 (11%)
Query: 25 KKRGHKKPRKDPGVPNSAPFKEA----LLREAELRKQRLEE-LKQQQKLDRQ--KELEKK 77
K+ KK +KDP + K+ L RE EL QR+E+ LK+ L+ Q + EKK
Sbjct: 177 KENQDKKQQKDPRLTMEMRHKQVKENRLRREKELEYQRIEKTLKKSAFLEAQCLVQEEKK 236
Query: 78 RK 79
RK
Sbjct: 237 RK 238
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 38.5 bits (88), Expect = 0.016
Identities = 25/127 (19%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
K ++ ++K+RE K+R++ +K ++ +E + + E +++ E++++
Sbjct: 579 KVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRR 638
Query: 65 QQKLDRQKE---LEKKRKLETNPDIKPSNVEPM-EKEFGLCKTENKAKSG----KQNSKK 116
Q++ R++E E++ K+ ++ E M E+E +C+ E K + ++ +K
Sbjct: 639 QEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEK 698
Query: 117 LYCQELK 123
++ QE++
Sbjct: 699 MWEQEVR 705
Score = 36.6 bits (83), Expect = 0.059
Identities = 28/132 (21%), Positives = 68/132 (51%), Gaps = 15/132 (11%)
Query: 5 KRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQ 64
K ++ ++K+RE K+R++ +K ++ + ++ +RE E R+++ E +Q
Sbjct: 478 KMWRQEEKIREQEEKIREQEEKMWRQEEKIH---------EQEKIREEEKRQEQEEMWRQ 528
Query: 65 QQKLDRQKEL--EKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQEL 122
++K+ Q+E+ +K++ E I+ + +E + E K ++ +K++ QE
Sbjct: 529 EEKIREQEEIWRQKEKIHEQEEKIRKQEEKMWRQEEKMHDQEEKI---REQEEKVWRQE- 584
Query: 123 KKVIEASDVVLE 134
+K+ E + + E
Sbjct: 585 EKIREQEEKIRE 596
Score = 31.6 bits (70), Expect = 1.9
Identities = 19/88 (21%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 10 QKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLD 69
Q+K+RE K ++E K R +K R++ ++ +E ++R+Q + +Q++K+
Sbjct: 450 QEKIREQEEKRQEEEKIREQEK-RQEQEAKMWRQEEKIREQEEKIREQEEKMWRQEEKIH 508
Query: 70 RQKELEKKRKLETNPDIKPSNVEPMEKE 97
Q+++ ++ K + ++ + E+E
Sbjct: 509 EQEKIREEEKRQEQEEMWRQEEKIREQE 536
Score = 30.0 bits (66), Expect = 5.6
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 453 EEKDIHEELPKRKERKQEE-----REDDKDSDQETVDEEVDENSSGMFAAEE---TGEAL 504
EEK EE + +E++QE+ R+++K +QE E++ E M+ EE E +
Sbjct: 457 EEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQE---EKIREQEEKMWRQEEKIHEQEKI 513
Query: 505 SEETTAGEQSTRSFILDKIIEEDDAY 530
EE EQ +KI E+++ +
Sbjct: 514 REEEKRQEQEEMWRQEEKIREQEEIW 539
>gi|154354979 myosin X [Homo sapiens]
Length = 2058
Score = 38.5 bits (88), Expect = 0.016
Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 33/155 (21%)
Query: 4 HKRYKIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELK 63
+++ +K+ +E +K +E KK+ ++ R+ +E REAELR Q+ EE +
Sbjct: 808 YRQLLAEKREQEEKKKQEEEEKKKREEEERE----------RERERREAELRAQQEEETR 857
Query: 64 QQQKLDR----------QKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQN 113
+QQ+L+ +ELEK+++ N ++ + +EKE E+ + +Q
Sbjct: 858 KQQELEALQKSQKEAELTRELEKQKE---NKQVE--EILRLEKEI-----EDLQRMKEQQ 907
Query: 114 SKKLYCQELKKVIEASDVVLEVLDARDPLGCRCPQ 148
L L+K+ E D L L+ CR Q
Sbjct: 908 ELSLTEASLQKLQERRDQELRRLEEE---ACRAAQ 939
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 38.5 bits (88), Expect = 0.016
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Query: 8 KIQKKVREHHRKLRKEAKKR-GHKKPRKDP--GVPNSAPFKEALLREAELRK--QRLEEL 62
+ +K+ E R++ ++ K K R D G+ P E + RE E K +R +EL
Sbjct: 461 RARKRREEEERRMEEQRKAACAEKLKRLDEKLGILEKQPSPEEI-REREREKEREREKEL 519
Query: 63 KQQQKLDRQKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKS-GKQNSKKLYCQE 121
+++Q+ +R+KE EK R+ + + + + ++E + + K K +Q K+ Q+
Sbjct: 520 EKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQK 579
Query: 122 LKKVIEASDVVLEVLDARDPLGCRCPQVEEAI 153
+K+ + ++ E + + R P +E +
Sbjct: 580 MKEQEKECELEKEREKLEEKIEPREPNLEPMV 611
Score = 38.1 bits (87), Expect = 0.020
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 6 RYKIQKKVREHHRKLRKEAKKRGHKKPRKDPG--VPNSAPFKEALLREAELRKQRLEELK 63
R + ++K RE ++L KE ++ K+ KD ++ ++ E+ K+R +E
Sbjct: 505 REREREKEREREKELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQE-- 562
Query: 64 QQQKLDRQKELEK-----------------KRKLETNPDIKPSNVEPM---EKEFGLCKT 103
++++L+RQKE EK + KLE + + N+EPM ++ C
Sbjct: 563 KEKELERQKEKEKELQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQESENSCNK 622
Query: 104 ENKAKSGKQNSKK 116
E + +Q+S +
Sbjct: 623 EEEPVFTRQDSNR 635
Score = 37.0 bits (84), Expect = 0.046
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 2/111 (1%)
Query: 15 EHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEAL-LREAELRKQRLEELKQQQKLDRQKE 73
E RK R+E ++R ++ RK E L + E + + + E +++++ +R+KE
Sbjct: 460 ERARKRREEEERRMEEQ-RKAACAEKLKRLDEKLGILEKQPSPEEIREREREKEREREKE 518
Query: 74 LEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKKLYCQELKK 124
LEK+++ E + + EKE L K + K + ++ K+ +EL++
Sbjct: 519 LEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELER 569
Score = 30.8 bits (68), Expect = 3.3
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 450 GIIEEKDIHEELPKRKERKQEEREDDKDSDQETVDEEVDE 489
GI+E++ EE+ +R+ K+ ERE + + +QE E+ E
Sbjct: 493 GILEKQPSPEEIREREREKEREREKELEKEQEQEREKERE 532
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 38.1 bits (87), Expect = 0.020
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 23/138 (16%)
Query: 8 KIQKKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQK 67
++ +KV E RKL +E KKR +P S E L E RL+EL +++K
Sbjct: 363 ELTRKVEELQRKLDEEVKKRQKLEP--------SQVGLERQLEEKTEECSRLQELLERRK 414
Query: 68 LDRQ---KELEK-KRKLETNPDIKPSNVEPMEKEFGLCKTENKAK--SGKQNSKKLYCQE 121
+ Q KEL+ KR L+ D++ E + + +NK K G + +K++
Sbjct: 415 GEAQQSNKELQNMKRLLDQGEDLRHG------LETQVMELQNKLKHVQGPEPAKEVL--- 465
Query: 122 LKKVIEASDVVLEVLDAR 139
LK ++E +++ EVL+ +
Sbjct: 466 LKDLLETRELLEEVLEGK 483
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 38.1 bits (87), Expect = 0.020
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 13/101 (12%)
Query: 11 KKVREHHRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDR 70
KK R RKL + R HKK +K ++ E + E ++K +
Sbjct: 356 KKPRSPKRKLSRSPSPRRHKKEKKKD-------------KDKERSRDERERSTSKKKKSK 402
Query: 71 QKELEKKRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGK 111
KE +++RK E++ D+K + E+E G + K + K
Sbjct: 403 DKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEEKK 443
Score = 30.0 bits (66), Expect = 5.6
Identities = 21/100 (21%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 17 HRKLRKEAKKRGHKKPRKDPGVPNSAPFKEALLREAELRKQRLEELKQQQKLDRQKELEK 76
HR+ R +++R H K R + K R + R++ + D++KE ++
Sbjct: 266 HRRSRSRSRRRSHSKSR------SRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKE 319
Query: 77 KRKLETNPDIKPSNVEPMEKEFGLCKTENKAKSGKQNSKK 116
K++ +T P K + + + +++SG ++ KK
Sbjct: 320 KKRSKTPP--KSYSTARRSRSASRERRRRRSRSGTRSPKK 357
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,052,484
Number of Sequences: 37866
Number of extensions: 1009583
Number of successful extensions: 11571
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 382
Number of HSP's that attempted gapping in prelim test: 7601
Number of HSP's gapped (non-prelim): 3235
length of query: 537
length of database: 18,247,518
effective HSP length: 107
effective length of query: 430
effective length of database: 14,195,856
effective search space: 6104218080
effective search space used: 6104218080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.