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Search of human proteins with 13128976
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13128976 Yip1 domain family, member 2 [Homo sapiens]
(316 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13128976 Yip1 domain family, member 2 [Homo sapiens] 646 0.0
gi|10092643 Yip1 domain family, member 1 [Homo sapiens] 294 6e-80
gi|52317192 olfactory receptor, family 2, subfamily B, member 11... 40 0.003
gi|14150076 Yip1 domain family, member 4 [Homo sapiens] 36 0.039
gi|49472828 natural killer cell-specific antigen KLIP1 [Homo sap... 36 0.039
gi|52218832 olfactory receptor, family 1, subfamily L, member 8 ... 36 0.051
gi|45504386 olfactory receptor, family 2, subfamily B, member 6 ... 35 0.067
gi|51230656 olfactory receptor, family 8, subfamily I, member 2 ... 35 0.067
gi|53828696 olfactory receptor, family 5, subfamily B, member 17... 35 0.067
gi|53828732 olfactory receptor, family 5, subfamily H, member 6 ... 35 0.067
gi|239754692 PREDICTED: hypothetical protein [Homo sapiens] 35 0.087
gi|239749236 PREDICTED: hypothetical protein XP_002346973 [Homo ... 35 0.087
gi|239743328 PREDICTED: hypothetical protein XP_002342823 [Homo ... 35 0.087
gi|239509011 PREDICTED: similar to zinc finger domain-related pr... 35 0.087
gi|53828698 olfactory receptor, family 13, subfamily G, member 1... 35 0.087
gi|68533232 olfactory receptor, family 2, subfamily W, member 3 ... 34 0.15
gi|52546687 olfactory receptor, family 1, subfamily L, member 4 ... 34 0.15
gi|52546685 olfactory receptor, family 1, subfamily L, member 3 ... 33 0.25
gi|52317170 olfactory receptor, family 1, subfamily L, member 6 ... 33 0.25
gi|116686100 olfactory receptor, family 1, subfamily L, member 1... 33 0.25
gi|53933201 olfactory receptor, family 5, subfamily B, member 2 ... 33 0.33
gi|153791572 olfactory receptor, family 13, subfamily A, member ... 33 0.43
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 32 0.57
gi|52218854 olfactory receptor, family 13, subfamily C, member 5... 32 0.57
gi|52317180 olfactory receptor, family 13, subfamily C, member 2... 32 0.57
gi|145279179 olfactory receptor, family 8, subfamily K, member 5... 32 0.57
gi|118442843 olfactory receptor, family 2, subfamily C, member 1... 32 0.74
gi|167830488 olfactory receptor, family 2, subfamily S, member 2... 32 0.96
gi|52317138 olfactory receptor, family 5, subfamily R, member 1 ... 32 0.96
gi|52353304 olfactory receptor, family 8, subfamily U, member 1 ... 31 1.3
>gi|13128976 Yip1 domain family, member 2 [Homo sapiens]
Length = 316
Score = 646 bits (1667), Expect = 0.0
Identities = 316/316 (100%), Positives = 316/316 (100%)
Query: 1 MASADELTFHEFEEATNLLADTPDAATTSRSDQLTPQGHVAVAVGSGGSYGAEDEVEEES 60
MASADELTFHEFEEATNLLADTPDAATTSRSDQLTPQGHVAVAVGSGGSYGAEDEVEEES
Sbjct: 1 MASADELTFHEFEEATNLLADTPDAATTSRSDQLTPQGHVAVAVGSGGSYGAEDEVEEES 60
Query: 61 DKAALLQEQQQQQQPGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPD 120
DKAALLQEQQQQQQPGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPD
Sbjct: 61 DKAALLQEQQQQQQPGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPD 120
Query: 121 LYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLAL 180
LYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLAL
Sbjct: 121 LYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLAL 180
Query: 181 WGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSA 240
WGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSA
Sbjct: 181 WGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSA 240
Query: 241 AGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFFQSLPPENVAPPPQITSLP 300
AGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFFQSLPPENVAPPPQITSLP
Sbjct: 241 AGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFFQSLPPENVAPPPQITSLP 300
Query: 301 SNIALSPTLPQSLAPS 316
SNIALSPTLPQSLAPS
Sbjct: 301 SNIALSPTLPQSLAPS 316
>gi|10092643 Yip1 domain family, member 1 [Homo sapiens]
Length = 306
Score = 294 bits (753), Expect = 6e-80
Identities = 149/308 (48%), Positives = 191/308 (62%), Gaps = 8/308 (2%)
Query: 1 MASADELTFHEFEEATNLLADTPDAATTSRSDQ-LTPQGHVAVAVGSGGSYGAEDEVEEE 59
MA+ D+L F EF A L PDA T + D TP+ GSG E ++
Sbjct: 1 MAAVDDLQFEEFGNAATSLTANPDATTVNIEDPGETPKHQPGSPRGSGREEDDELLGNDD 60
Query: 60 SDKAALLQEQQQQQQPGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRP 119
SDK LL Q++ FWTF YYQ+FFDVDT QV DRIKGSLLP PG NFVR ++R+ P
Sbjct: 61 SDKTELLAGQKKSSP--FWTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNP 118
Query: 120 DLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLA 179
DLYGPFWICATL F +A++GNL+ L + + HY P+F KV++A IY YAWLVPLA
Sbjct: 119 DLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLA 178
Query: 180 LWGFLRWRKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLS 239
LWGFL WR + Y+FLE VC+YGYSLF++IP +LW+IP ++W+ +ALG+S
Sbjct: 179 LWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGIS 238
Query: 240 AAGLVFTLWPVVREDTRLVATVLLSVVVLLHALLAMGCKLYFFQS-----LPPENVAPPP 294
+ L T WP VRED R VA + +VLLH LL++GC YFF + LP P
Sbjct: 239 GSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFFDAPEMDHLPTTTATPNQ 298
Query: 295 QITSLPSN 302
+ + S+
Sbjct: 299 TVAAAKSS 306
>gi|52317192 olfactory receptor, family 2, subfamily B, member 11
[Homo sapiens]
Length = 317
Score = 40.0 bits (92), Expect = 0.003
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ + +RP L P ++ L++VLA+ GN+ ++LA R DP +H SP + ++
Sbjct: 16 FILLGVSDRPWLELPLFVVLLLSYVLAMLGNVAIILASRVDPQLH-SPMYIFLSHLSFLD 74
Query: 170 YCY 172
CY
Sbjct: 75 LCY 77
>gi|14150076 Yip1 domain family, member 4 [Homo sapiens]
Length = 244
Score = 36.2 bits (82), Expect = 0.039
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 40/188 (21%)
Query: 88 DVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQ 147
D+D + +I+ L+P P F R +R+ PD +GP LA VL +
Sbjct: 82 DIDLKDIYYKIRCVLMPMPSLGFNRQVVRDNPDFWGP------LAVVLFFS--------- 126
Query: 148 RRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERMGPYTFLETVCIYG 207
I QF V +W++ + ++G L + G + + + + G
Sbjct: 127 ----MISLYGQFRVV----------SWIITIWIFGSLTIFLLARVLGGEVAYGQVLGVIG 172
Query: 208 YSLFVFIPMVVLWLI-----PVPWLQWLFGALALGLSAAGLVFTLWPVVREDTRLVATVL 262
YSL I + + L+ V L LFG SAA L +V E+ + +L
Sbjct: 173 YSLLPLIVIAPVLLVVGSFEVVSTLIKLFGVFWAAYSAASL------LVGEEFKTKKPLL 226
Query: 263 LSVVVLLH 270
+ + LL+
Sbjct: 227 IYPIFLLY 234
>gi|49472828 natural killer cell-specific antigen KLIP1 [Homo
sapiens]
Length = 350
Score = 36.2 bits (82), Expect = 0.039
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 26/193 (13%)
Query: 86 FFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVL 145
+FDV+ +QV R+ S++P NF + + +LYGP + TL + L+
Sbjct: 121 YFDVEPAQVRSRLLESMIPIKMVNFPQ---KIAGELYGPLMLVFTLVAI--------LLH 169
Query: 146 AQRRDPSIHYSPQFHKVTVAGISI-YCYA-WLVPLALWGFLRWRKGVQERMGPYTFLETV 203
+ +I + T+ G +I C+ WL + FL + Q T L+ +
Sbjct: 170 GMKTSDTI-----IREGTLMGTAIGTCFGYWLGVSSFIYFLAYLCNAQ-----ITMLQML 219
Query: 204 CIYGYSLFVF-IPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTLWPVVREDTRLVATVL 262
+ GY LF I + + + I + L +LF L GLS +V L V R +L
Sbjct: 220 ALLGYGLFGHCIVLFITYNIHLHALFYLFWLLVGGLSTLRMVAVL--VSRTVGPTQRLLL 277
Query: 263 LSVVVLLHALLAM 275
+ LH L +
Sbjct: 278 CGTLAALHMLFLL 290
>gi|52218832 olfactory receptor, family 1, subfamily L, member 8
[Homo sapiens]
Length = 309
Score = 35.8 bits (81), Expect = 0.051
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ L +RP+ ++ + +++ +TGNL ++LA R +P + +P + ++ ++
Sbjct: 13 FILLGLSSRPEDQKTLFVLFLIVYLVTITGNLLIILAIRFNPHLQ-TPMYFFLSFLSLTD 71
Query: 170 YCYAW-LVPLALWGFLRWRKGV 190
C+ +VP L FL +K +
Sbjct: 72 ICFTTSVVPKMLMNFLSEKKTI 93
>gi|45504386 olfactory receptor, family 2, subfamily B, member 6
[Homo sapiens]
Length = 313
Score = 35.4 bits (80), Expect = 0.067
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ +RP L P + +++ + + GNLT++L R D +H +P + +T +
Sbjct: 12 FILLGFSDRPWLEFPLLVVFLISYTVTIFGNLTIILVSRLDTKLH-TPMYFFLTNLSLLD 70
Query: 170 YCY-AWLVPLALWGFLRWRKGVQER 193
CY VP L RK + R
Sbjct: 71 LCYTTCTVPQMLVNLCSIRKVISYR 95
>gi|51230656 olfactory receptor, family 8, subfamily I, member 2
[Homo sapiens]
Length = 310
Score = 35.4 bits (80), Expect = 0.067
Identities = 21/81 (25%), Positives = 35/81 (43%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ N P+L ++ ++ V GNL L+ R D +H F +A I I
Sbjct: 12 FILSGFANHPELQVSLFLMFLFIYLFTVLGNLGLITLIRMDSQLHTPMYFFLSNLAFIDI 71
Query: 170 YCYAWLVPLALWGFLRWRKGV 190
+ + + P AL F R+ +
Sbjct: 72 FYSSTVTPKALVNFQSNRRSI 92
>gi|53828696 olfactory receptor, family 5, subfamily B, member 17
[Homo sapiens]
Length = 314
Score = 35.4 bits (80), Expect = 0.067
Identities = 21/75 (28%), Positives = 36/75 (48%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ L N P+L P +I TL +++ +TGNL +++ D +H F ++ I
Sbjct: 10 FILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLDSHLHTPMYFFLSNLSLAGI 69
Query: 170 YCYAWLVPLALWGFL 184
+ + P L G L
Sbjct: 70 GYSSAVTPKVLTGLL 84
>gi|53828732 olfactory receptor, family 5, subfamily H, member 6
[Homo sapiens]
Length = 325
Score = 35.4 bits (80), Expect = 0.067
Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 25/208 (12%)
Query: 80 FSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTG 139
F Y F S+ ++ +LL FV ++PD P ++ + +++ + G
Sbjct: 2 FLYLCFIFQRTCSEEMEEENATLLTE----FVLTGFLHQPDCKIPLFLAFLVIYLITIMG 57
Query: 140 NLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERMGPYTF 199
NL L++ +DP +H ++A + + + P L FL K +
Sbjct: 58 NLGLIVLIWKDPHLHIPMYLFLGSLAFVDASLSSTVTPKMLINFLAKSKMIS-------- 109
Query: 200 LETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTLWPVVREDTRLVA 259
L + +SL + L + + +++ AL L+PV+ + +
Sbjct: 110 LSECMVQFFSLVTTVTTECFLLATMAYDRYVAICKAL----------LYPVIMTNELCIQ 159
Query: 260 TVLLSVV-VLLHALL--AMGCKLYFFQS 284
++LS + LLHAL+ A +L F S
Sbjct: 160 LLVLSFIGGLLHALIHEAFSFRLTFCNS 187
>gi|239754692 PREDICTED: hypothetical protein [Homo sapiens]
Length = 108
Score = 35.0 bits (79), Expect = 0.087
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 187 RKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFT 246
++GVQ P FL C+Y YSL++F L+LIP L+ L + T
Sbjct: 29 QRGVQANQTPVLFLHISCVY-YSLYLFFLFCCLFLIP---LEQKMTTSPLPYPCDNIHVT 84
Query: 247 LWPV--VREDTRL 257
+WP+ V +TR+
Sbjct: 85 VWPLGEVLMETRM 97
>gi|239749236 PREDICTED: hypothetical protein XP_002346973 [Homo
sapiens]
Length = 108
Score = 35.0 bits (79), Expect = 0.087
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 187 RKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFT 246
++GVQ P FL C+Y YSL++F L+LIP L+ L + T
Sbjct: 29 QRGVQANQTPVLFLHISCVY-YSLYLFFLFCCLFLIP---LEQKMTTSPLPYPCDNIHVT 84
Query: 247 LWPV--VREDTRL 257
+WP+ V +TR+
Sbjct: 85 VWPLGEVLMETRM 97
>gi|239743328 PREDICTED: hypothetical protein XP_002342823 [Homo
sapiens]
Length = 108
Score = 35.0 bits (79), Expect = 0.087
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 187 RKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFT 246
++GVQ P FL C+Y YSL++F L+LIP L+ L + T
Sbjct: 29 QRGVQANQTPVLFLHISCVY-YSLYLFFLFCCLFLIP---LEQKMTTSPLPYPCDNIHVT 84
Query: 247 LWPV--VREDTRL 257
+WP+ V +TR+
Sbjct: 85 VWPLGEVLMETRM 97
>gi|239509011 PREDICTED: similar to zinc finger domain-related
protein TSRM [Homo sapiens]
Length = 108
Score = 35.0 bits (79), Expect = 0.087
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 187 RKGVQERMGPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFT 246
++GVQ P FL C+Y YSL++F L+LIP L+ L + T
Sbjct: 29 QRGVQANQTPVLFLHISCVY-YSLYLFFLFCCLFLIP---LEQKMTTSPLPYPCDNIHVT 84
Query: 247 LWPV--VREDTRL 257
+WP+ V +TR+
Sbjct: 85 VWPLGEVLMETRM 97
>gi|53828698 olfactory receptor, family 13, subfamily G, member 1
[Homo sapiens]
Length = 307
Score = 35.0 bits (79), Expect = 0.087
Identities = 16/71 (22%), Positives = 38/71 (53%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ L +P+L G ++ + +++A GN+ +++A+ + ++H +T+A + I
Sbjct: 9 FIILGLTKKPELQGIIFLFFLIVYLVAFLGNMLIIIAKIYNNTLHTPMYVFLLTLAVVDI 68
Query: 170 YCYAWLVPLAL 180
C ++P L
Sbjct: 69 ICTTSIIPKML 79
>gi|68533232 olfactory receptor, family 2, subfamily W, member 3
[Homo sapiens]
Length = 314
Score = 34.3 bits (77), Expect = 0.15
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 109 NFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIH 154
+F+ +RP L ++ +A++L + GN T++L R DP +H
Sbjct: 11 HFILLGFSDRPHLERILFVVILIAYLLTLVGNTTIILVSRLDPHLH 56
>gi|52546687 olfactory receptor, family 1, subfamily L, member 4
[Homo sapiens]
Length = 311
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ L + P L P + + ++L GN+ ++LA DP +H F ++ + I
Sbjct: 13 FILLGLSSNPKLQKPLFAIFLIMYLLTAVGNVLIILAIYSDPRLHTPMYFFLSNLSFMDI 72
Query: 170 YCYAWLVPLALWGFL 184
+VP L FL
Sbjct: 73 CFTTVIVPKMLVNFL 87
>gi|52546685 olfactory receptor, family 1, subfamily L, member 3
[Homo sapiens]
Length = 324
Score = 33.5 bits (75), Expect = 0.25
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ L +R + P + + +++ + GNL ++LA DP + +P + +++ +
Sbjct: 12 FILLGLSSRSEDQRPLFALFLIIYLVTLMGNLLIILAIHSDPRLQ-NPMYFFLSILSFAD 70
Query: 170 YCYAW-LVPLALWGFLRWRKGV 190
CY +VP L FL +K +
Sbjct: 71 ICYTTVIVPKMLVNFLSEKKTI 92
>gi|52317170 olfactory receptor, family 1, subfamily L, member 6
[Homo sapiens]
Length = 347
Score = 33.5 bits (75), Expect = 0.25
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ L + P L P + + ++LA GN+ ++ A DP +H F ++ + I
Sbjct: 49 FILLGLSSNPQLQKPLFAIFLIMYLLAAVGNVLIIPAIYSDPRLHTPMYFFLSNLSFMDI 108
Query: 170 YCYAWLVPLALWGFL 184
+VP L FL
Sbjct: 109 CFTTVIVPKMLVNFL 123
>gi|116686100 olfactory receptor, family 1, subfamily L, member 1
[Homo sapiens]
Length = 360
Score = 33.5 bits (75), Expect = 0.25
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 103 LPRPGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKV 162
L RP F+ L +RP+ P + +++ V GNL ++LA R D + +P + +
Sbjct: 56 LTRPSE-FILLGLSSRPEDQKPLFAVFLPIYLITVIGNLLIILAIRSDTRLQ-TPMYFFL 113
Query: 163 TVAGISIYCYAW-LVPLALWGFLRWRKGV 190
++ CY ++P L FL K +
Sbjct: 114 SILSFVDICYVTVIIPKMLVNFLSETKTI 142
>gi|53933201 olfactory receptor, family 5, subfamily B, member 2
[Homo sapiens]
Length = 309
Score = 33.1 bits (74), Expect = 0.33
Identities = 21/79 (26%), Positives = 37/79 (46%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ L + P+L P +I T ++L + GNL ++L D +H F ++ +
Sbjct: 10 FILLGLTSVPELQIPLFILFTFIYLLTLCGNLGMMLLILMDSCLHTPMYFFLSNLSLVDF 69
Query: 170 YCYAWLVPLALWGFLRWRK 188
+ + P + GFLR K
Sbjct: 70 GYSSAVTPKVMAGFLRGDK 88
>gi|153791572 olfactory receptor, family 13, subfamily A, member 1
[Homo sapiens]
Length = 328
Score = 32.7 bits (73), Expect = 0.43
Identities = 18/71 (25%), Positives = 33/71 (46%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ P+ + C + A+TGN+ + LA +P +H F + +A + I
Sbjct: 30 FILQGFSEHPEYRVFLFSCFLFLYSGALTGNVLITLAITFNPGLHAPMYFFLLNLATMDI 89
Query: 170 YCYAWLVPLAL 180
C + ++P AL
Sbjct: 90 ICTSSIMPKAL 100
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2
[Homo sapiens]
Length = 747
Score = 32.3 bits (72), Expect = 0.57
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 40 VAVAVGSGGSYGAEDEVEEESDKAALLQEQQQQQQP 75
VA + G G EDE EEE D+ ALL+++ ++ P
Sbjct: 64 VAASGGGPGGDEEEDEEEEEEDEEALLEDEDEEPPP 99
>gi|52218854 olfactory receptor, family 13, subfamily C, member 5
[Homo sapiens]
Length = 318
Score = 32.3 bits (72), Expect = 0.57
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 115 LRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAW 174
L P L F++ + +V+ + GN TL+L DP +H F ++ + I
Sbjct: 17 LSGHPRLELLFFVLIFIMYVVILLGNGTLILISILDPHLHTPMYFFLGNLSFLDICYTTT 76
Query: 175 LVPLALWGFLRWRKGV 190
+P L FL RK +
Sbjct: 77 SIPSTLVSFLSERKTI 92
>gi|52317180 olfactory receptor, family 13, subfamily C, member 2
[Homo sapiens]
Length = 318
Score = 32.3 bits (72), Expect = 0.57
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 115 LRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAW 174
L P L F++ + +V+ + GN TL+L DP +H F ++ + I
Sbjct: 17 LSGHPRLELLFFVLIFIMYVVILLGNGTLILISILDPHLHTPMYFFLGNLSFLDICYTTT 76
Query: 175 LVPLALWGFLRWRKGV 190
+P L FL RK +
Sbjct: 77 SIPSTLVSFLSERKTI 92
>gi|145279179 olfactory receptor, family 8, subfamily K, member 5
[Homo sapiens]
Length = 307
Score = 32.3 bits (72), Expect = 0.57
Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKV 162
F+ L RP+L P + + +++ V GNLT+++ + D +H +P + +
Sbjct: 12 FILMELTRRPELQIPLFGVFLVIYLITVVGNLTMIILTKLDSHLH-TPMYFSI 63
>gi|118442843 olfactory receptor, family 2, subfamily C, member 1
[Homo sapiens]
Length = 312
Score = 32.0 bits (71), Expect = 0.74
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
FV + + P L F+I +++L + GN T++L R + +H F ++ + +
Sbjct: 12 FVLMGISDHPQLEMIFFIAILFSYLLTLLGNSTIILLSRLEARLHTPMYFFLSNLSSLDL 71
Query: 170 YCYAWLVP---LALWG 182
VP + LWG
Sbjct: 72 AFATSSVPQMLINLWG 87
>gi|167830488 olfactory receptor, family 2, subfamily S, member 2
[Homo sapiens]
Length = 319
Score = 31.6 bits (70), Expect = 0.96
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 106 PGHNFVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVA 165
P FV L P+L F++ L +++ + GN L+L D +H F ++
Sbjct: 9 PVMGFVLLRLSAHPELEKTFFVLILLMYLVILLGNGVLILVTILDSRLHTPMYFFLGNLS 68
Query: 166 GISIYCYAWLVPLALWGFL 184
+ I VPL L FL
Sbjct: 69 FLDICFTTSSVPLVLDSFL 87
>gi|52317138 olfactory receptor, family 5, subfamily R, member 1
[Homo sapiens]
Length = 324
Score = 31.6 bits (70), Expect = 0.96
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ + NRP+L P + + +++ V GNL L+ + D +H +P ++ ++
Sbjct: 12 FILKGITNRPELQAPCFGVFLVIYLVTVLGNLGLITLIKIDTRLH-TPMYYFLSHLAFVD 70
Query: 170 YCYA 173
CY+
Sbjct: 71 LCYS 74
>gi|52353304 olfactory receptor, family 8, subfamily U, member 1
[Homo sapiens]
Length = 309
Score = 31.2 bits (69), Expect = 1.3
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 110 FVRHHLRNRPDLYGPFWICATLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISI 169
F+ L + +L P ++ ++ V GNL L+L R D S++ +P + ++
Sbjct: 12 FILVGLTDHQELKMPLFVLFLSIYLFTVVGNLGLILLIRADTSLN-TPMYFFLSNLAFVD 70
Query: 170 YCYAWLVPLALWGFLRWRKGV 190
+CY+ ++ + G +++ V
Sbjct: 71 FCYSSVITPKMLGNFLYKQNV 91
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,113,003
Number of Sequences: 37866
Number of extensions: 603580
Number of successful extensions: 3112
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 3022
Number of HSP's gapped (non-prelim): 107
length of query: 316
length of database: 18,247,518
effective HSP length: 102
effective length of query: 214
effective length of database: 14,385,186
effective search space: 3078429804
effective search space used: 3078429804
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.