Search of human proteins with 4557663

Search of human proteins with 4557663

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4557663 immunoglobulin binding protein 1 [Homo sapiens]
         (339 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4557663 immunoglobulin binding protein 1 [Homo sapiens]            677   0.0  
gi|157426831 hypothetical protein LOC645545 [Homo sapiens]            577   e-165
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap...    39   0.007
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    38   0.011
gi|22027616 TNF receptor-associated factor 3 isoform 1 [Homo sap...    38   0.015
gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo sap...    38   0.015
gi|22027618 TNF receptor-associated factor 3 isoform 1 [Homo sap...    38   0.015
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap...    37   0.019
gi|31982906 cingulin-like 1 [Homo sapiens]                             37   0.019
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]                    37   0.019
gi|224809410 Homer, neuronal immediate early gene, 3 isoform 2 [...    36   0.056
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]    36   0.056
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]    36   0.056
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]           36   0.056
gi|40805858 isthmin 2 homolog isoform 1 [Homo sapiens]                 35   0.096
gi|224809419 Homer, neuronal immediate early gene, 3 isoform 3 [...    35   0.13 
gi|224809414 Homer, neuronal immediate early gene, 3 isoform 1 [...    35   0.13 
gi|224809408 Homer, neuronal immediate early gene, 3 isoform 1 [...    35   0.13 
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ...    35   0.13 
gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]           35   0.13 
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         34   0.16 
gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo sa...    34   0.16 
gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo sap...    34   0.16 
gi|118600967 shroom family member 4 [Homo sapiens]                     33   0.28 
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap...    33   0.28 
gi|38044112 restin isoform b [Homo sapiens]                            33   0.28 
gi|4506751 restin isoform a [Homo sapiens]                             33   0.28 
gi|189011559 B-cell scaffold protein with ankyrin repeats 1 isof...    33   0.28 
gi|144953889 B-cell scaffold protein with ankyrin repeats 1 isof...    33   0.28 
gi|144953891 B-cell scaffold protein with ankyrin repeats 1 isof...    33   0.28 

>gi|4557663 immunoglobulin binding protein 1 [Homo sapiens]
          Length = 339

 Score =  677 bits (1748), Expect = 0.0
 Identities = 339/339 (100%), Positives = 339/339 (100%)

Query: 1   MAAEDELQLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLD 60
           MAAEDELQLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLD
Sbjct: 1   MAAEDELQLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLD 60

Query: 61  LFSRNEDLEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYH 120
           LFSRNEDLEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYH
Sbjct: 61  LFSRNEDLEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYH 120

Query: 121 VAEFELPKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVE 180
           VAEFELPKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVE
Sbjct: 121 VAEFELPKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVE 180

Query: 181 SGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREASTSNSSRQERPPV 240
           SGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREASTSNSSRQERPPV
Sbjct: 181 SGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREASTSNSSRQERPPV 240

Query: 241 KPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPDQGIAKAAPEEFRKAAQQQ 300
           KPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPDQGIAKAAPEEFRKAAQQQ
Sbjct: 241 KPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPDQGIAKAAPEEFRKAAQQQ 300

Query: 301 EEQEEKEEEDDEQTLHRAREWDDWKDTHPRGYGNRQNMG 339
           EEQEEKEEEDDEQTLHRAREWDDWKDTHPRGYGNRQNMG
Sbjct: 301 EEQEEKEEEDDEQTLHRAREWDDWKDTHPRGYGNRQNMG 339


>gi|157426831 hypothetical protein LOC645545 [Homo sapiens]
          Length = 340

 Score =  577 bits (1486), Expect = e-165
 Identities = 291/339 (85%), Positives = 311/339 (91%), Gaps = 2/339 (0%)

Query: 2   AAEDE-LQLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLD 60
           AAEDE L  PRLPELF++ +QLLDEVE ATEP GSRIVQEKVFKGLDLL+K A+MLSQLD
Sbjct: 3   AAEDEFLPPPRLPELFDSSKQLLDEVEGATEPTGSRIVQEKVFKGLDLLDKVAKMLSQLD 62

Query: 61  LFSRNEDLEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYH 120
           LFSRNEDLEEI STDLKYL+VPAFQGALTMKQVNP KRLDHLQ+AREHFI YLTQCH Y 
Sbjct: 63  LFSRNEDLEEITSTDLKYLMVPAFQGALTMKQVNPRKRLDHLQQAREHFIKYLTQCHYYR 122

Query: 121 VAEFELPKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVE 180
           VAEFELP+T  NSAENH A +S AYPSLVAMASQRQAKI+RYKQKK LEH+LS MKSAVE
Sbjct: 123 VAEFELPQTKTNSAENHGAITSTAYPSLVAMASQRQAKIERYKQKKVLEHKLSTMKSAVE 182

Query: 181 SGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREASTSNSSRQERPPV 240
           SGQAD+ERVREYYLLHLQRWIDISLEEIESIDQEIKIL E+DSSREASTSNS  Q+RPP+
Sbjct: 183 SGQADNERVREYYLLHLQRWIDISLEEIESIDQEIKILGEKDSSREASTSNSCHQKRPPM 242

Query: 241 KPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPDQGIAKAAPEEFRKAAQQQ 300
           KPFILTRNMAQAKVFGAGYPSL +MTVSDWY+QH+K+G LPDQGIAKA PEEFRKA QQQ
Sbjct: 243 KPFILTRNMAQAKVFGAGYPSLASMTVSDWYDQHQKHGVLPDQGIAKATPEEFRKATQQQ 302

Query: 301 EEQEEKEEEDDEQTLHRAREWDDWKDTHPRGYGNRQNMG 339
           E+Q EKEEEDDEQTL RAREWDDWKDTHPRGYGNRQNMG
Sbjct: 303 EDQ-EKEEEDDEQTLQRAREWDDWKDTHPRGYGNRQNMG 340


>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
           sapiens]
          Length = 528

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 16/193 (8%)

Query: 150 AMASQRQAKIQRYKQKKELEHRLSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIE 209
           A   +++  I+    KK LE ++  +++  E  +  +   +E    H + W +       
Sbjct: 151 AREEKQKKLIELQAGKKSLEDQVEMLRTVKEEAEKPEREAKEQ---HQKLWEEQLAAAKA 207

Query: 210 SIDQEIKI--LRERDSSREASTSNSSRQERPPVKPF---ILTRNMAQAKVFGAGYPSLPT 264
             +QE+     +E D   + + S +  Q  P +       L+   AQA + G       +
Sbjct: 208 QQEQELAADAFKELDDDMDGTVSVTELQTHPELDTDGDGALSEAEAQALLSGDTQTDATS 267

Query: 265 MTVSDWYEQHRKYG--ALPDQGIAKAAP------EEFRKAAQQQEEQEEKEEEDDEQTLH 316
                W     KY   ALP    A +AP      EE         E+EE+EEE++E+   
Sbjct: 268 FYDRVWAAIRDKYRSEALPTDLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAE 327

Query: 317 RAREWDDWKDTHP 329
              E +D ++  P
Sbjct: 328 EEEEEEDSEEAPP 340


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
           sapiens]
          Length = 1341

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 64/306 (20%), Positives = 122/306 (39%), Gaps = 61/306 (19%)

Query: 8   QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNED 67
           +LP++PE             V T+P+ SR + E     LD   K  + L   DL +  E 
Sbjct: 41  KLPKMPEA------------VGTDPSTSRKMAELEEVTLD--GKPLQALRVTDLKAALEQ 86

Query: 68  LEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFELP 127
              +A +  K  LV   +GAL          L++LQ+            H    A F+  
Sbjct: 87  -RGLAKSGQKSALVKRLKGALM---------LENLQK------------HSTPHAAFQ-- 122

Query: 128 KTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVESGQADDE 187
                   N      M+  S +    ++Q ++ R + ++E        +++ ES   +DE
Sbjct: 123 -------PNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEEASAES---EDE 172

Query: 188 RVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREASTSNSSRQERPPVKPFILTR 247
                 ++H +    +   + +S  +  ++   R S R++S+ +  + +    KP    R
Sbjct: 173 ------MIHPEGVASLLPPDFQSSLERPELELSRHSPRKSSSISEEKGDSDDEKPRKGER 226

Query: 248 NMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPDQGIAKAAPEEFRKAAQQQEEQEEKE 307
             ++ +   A   S  +    +  +Q       P + +   A    +   +++EE+EE+E
Sbjct: 227 RSSRVRQARAAKLSEGSQPAEEEEDQET-----PSRNLRVRADRNLK--TEEEEEEEEEE 279

Query: 308 EEDDEQ 313
           EEDDE+
Sbjct: 280 EEDDEE 285


>gi|22027616 TNF receptor-associated factor 3 isoform 1 [Homo
           sapiens]
          Length = 568

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 14/117 (11%)

Query: 131 NNSAENHTANSSMAYPSLVAMASQRQAK---------IQRYKQKKELEHRLSAMKSAVES 181
           N   + H A+S++ + +L+   S    K         +++ K  + L +++ + +  +E 
Sbjct: 245 NQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIER 304

Query: 182 GQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILR----ERDSSREASTSNSSR 234
            Q +  R  E  +LHLQR ID   E+++ +D+EI+  R    E DS + +  S  +R
Sbjct: 305 -QKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR 360


>gi|22027620 TNF receptor-associated factor 3 isoform 2 [Homo
           sapiens]
          Length = 543

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 14/117 (11%)

Query: 131 NNSAENHTANSSMAYPSLVAMASQRQAK---------IQRYKQKKELEHRLSAMKSAVES 181
           N   + H A+S++ + +L+   S    K         +++ K  + L +++ + +  +E 
Sbjct: 220 NQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIER 279

Query: 182 GQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILR----ERDSSREASTSNSSR 234
            Q +  R  E  +LHLQR ID   E+++ +D+EI+  R    E DS + +  S  +R
Sbjct: 280 -QKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR 335


>gi|22027618 TNF receptor-associated factor 3 isoform 1 [Homo
           sapiens]
          Length = 568

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 14/117 (11%)

Query: 131 NNSAENHTANSSMAYPSLVAMASQRQAK---------IQRYKQKKELEHRLSAMKSAVES 181
           N   + H A+S++ + +L+   S    K         +++ K  + L +++ + +  +E 
Sbjct: 245 NQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIER 304

Query: 182 GQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILR----ERDSSREASTSNSSR 234
            Q +  R  E  +LHLQR ID   E+++ +D+EI+  R    E DS + +  S  +R
Sbjct: 305 -QKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNR 360


>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
           sapiens]
          Length = 525

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 44/196 (22%), Positives = 81/196 (41%), Gaps = 21/196 (10%)

Query: 150 AMASQRQAKIQRYKQKKELEHRLSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIE 209
           A   +++  I+    KK LE ++  +++  E  +  +   +E    H + W +       
Sbjct: 151 AREEKQKKLIELQAGKKSLEDQVEMLRTVKEEAEKPEREAKEQ---HQKLWEEQLAAAKA 207

Query: 210 SIDQEIKI--LRERDSSREASTSNSSRQERPPVKPF---ILTRNMAQAKVFGAGYPSLPT 264
             +QE+     +E D   + + S +  Q  P +       L+   AQA + G       +
Sbjct: 208 QQEQELAADAFKELDDDMDGTVSVTELQTHPELDTDGDGALSEAEAQALLSGDTQTDATS 267

Query: 265 MTVSDWYEQHRKYG--ALPDQGIAKAAPEEFRKAAQQQ-------EEQEEKEEEDDEQTL 315
                W     KY   ALP    A +AP+      +Q        EE+EE+EEE++E+  
Sbjct: 268 FYDRVWAAIRDKYRSEALPTDLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEE-- 325

Query: 316 HRAREWDDWKDTHPRG 331
             A E ++ +D+  +G
Sbjct: 326 --AEEEEEEEDSEVQG 339


>gi|31982906 cingulin-like 1 [Homo sapiens]
          Length = 1302

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 30/169 (17%)

Query: 47  DLLEKAAEMLSQLDLFSRNED------LEEI--ASTDLKYLLV----------------P 82
           DL ++ +EM  +LD   R+ED      +EE+  A  DL+ LL+                 
Sbjct: 702 DLQDQLSEMHDELDSAKRSEDREKGALIEELLQAKQDLQDLLIAKEEQEDLLRKRERELT 761

Query: 83  AFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFELPKTMNNSAENHTANSS 142
           A +GAL  +  +  + +D L+   +  +  L +         E+  + +N++E   A + 
Sbjct: 762 ALKGALKEEVSSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQDQAGTE 821

Query: 143 MAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVESGQADDERVRE 191
           M     V +  +   K+Q   + +ELE R++ ++  +E  + D+ + +E
Sbjct: 822 MR----VKLLQEENEKLQ--GRSEELERRVAQLQRQIEDLKGDEAKAKE 864



 Score = 30.0 bits (66), Expect = 3.1
 Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 34/231 (14%)

Query: 25   EVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNEDLEEIAST-DLKYLLVPA 83
            E+E+  E   S ++ E++        ++ E + QL    RNE L+E A+  DL+   +  
Sbjct: 1074 EMELEEERNNSDLLSERI-------SRSREQMEQL----RNELLQERAARQDLECDKI-- 1120

Query: 84   FQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFE--LPKTMNNSAENHTANS 141
               +L  +  +   R+ HL+ +       L       +AE E  L     + A    +N 
Sbjct: 1121 ---SLERQNKDLKSRIIHLEGSYRSSKEGLVVQMEARIAELEDRLESEERDRANLQLSNR 1177

Query: 142  SMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAVESGQADDERVREYYLLHLQRWI 201
             +       +       +    QK +L  RL AMK  VE  + + +R+ E     LQR +
Sbjct: 1178 RLERKVKELVMQVDDEHLSLTDQKDQLSLRLKAMKRQVEEAEEEIDRL-ESSKKKLQREL 1236

Query: 202  DISLEEIESIDQEI--------------KILRERDSSREASTSNSSRQERP 238
            +  ++  E +  ++              K+L + D   + ST   S  E P
Sbjct: 1237 EEQMDMNEHLQGQLNSMKKDLRLKKLPSKVLDDMDDDDDLSTDGGSLYEAP 1287



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 13/87 (14%)

Query: 151 MASQRQAKIQRYKQKKELEHRLSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIES 210
           +A + Q  + R K+++EL     A+K  V S   + ++++E Y   LQ       E +E 
Sbjct: 744 IAKEEQEDLLR-KRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQ----ALRESVEE 798

Query: 211 IDQEIKILRERDSSREASTSNSSRQER 237
             + +++L        AS SN+S Q++
Sbjct: 799 ATKNVEVL--------ASRSNTSEQDQ 817


>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
          Length = 1780

 Score = 37.4 bits (85), Expect = 0.019
 Identities = 34/169 (20%), Positives = 77/169 (45%), Gaps = 14/169 (8%)

Query: 163  KQKKELEHRLSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERD 222
            ++ ++L+  LSA  +  ++ +AD +R  E Y   L+  +  + ++I+ + +E+ ++R+ D
Sbjct: 1215 QETEKLKEELSASSARTQNLKADLQRKEEDYA-DLKEKLTDAKKQIKQVQKEVSVMRDED 1273

Query: 223  SSREASTSNSSRQERPPVKPFILT-RNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALP 281
                   +   +++    +   +  R + Q K        L    V +  +Q+ +  A  
Sbjct: 1274 KLLRIKINELEKKKNQCSQELDMKQRTIQQLK------EQLNNQKVEEAIQQYER--ACK 1325

Query: 282  DQGIAKAAPEEFRKAAQQQE----EQEEKEEEDDEQTLHRAREWDDWKD 326
            D  + +   E+ R   ++QE    EQ++  E   E+    A E + WK+
Sbjct: 1326 DLNVKEKIIEDMRMTLEEQEQTQVEQDQVLEAKLEEVERLATELEKWKE 1374


>gi|224809410 Homer, neuronal immediate early gene, 3 isoform 2
           [Homo sapiens]
          Length = 358

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 135 ENHTANSSMAYPSLVAMASQRQAKIQRYKQKK-ELEHRLSAMKSAVESGQADDERVREYY 193
           E  T  S    P     A++R+   Q+ + +  ELEH+L AM+ ++E  +A+ ER R   
Sbjct: 270 EIQTLKSQTGGPREALEAAEREETQQKVQTRNAELEHQLRAMERSLEEARAERERARA-E 328

Query: 194 LLHLQRWIDISLEEIESIDQEIKILRE 220
           +    + +D+SL E+  + + +  L E
Sbjct: 329 VGRAAQLLDVSLFELSELREGLARLAE 355


>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
          Length = 2454

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 33/186 (17%)

Query: 152  ASQRQAKIQRYKQKKELEHRLSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIESI 211
            +   ++K  RY+ +  L H+L+   S  ESG+    + +E+  +  +    +S E+ E  
Sbjct: 1288 SDSEESKKPRYRHRL-LRHKLTV--SDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDS 1344

Query: 212  DQEIKILRERDSSREASTSNSSRQERPPVKPFILTRNMAQAKVFGAGYPSLPTMTVSDWY 271
            D      +E   S E S S   ++ R        TR+  +A++                 
Sbjct: 1345 D-----FQESGVSEEVSESEDEQRPR--------TRSAKKAEL----------------E 1375

Query: 272  EQHRKYGALPDQGIAKAAPEEFRK-AAQQQEEQEEKEEEDDEQTLHRAREWDDWKDTHPR 330
            E  R Y     +   K   +   +  +  +EE+EEKEEE++E+      E D+  D+   
Sbjct: 1376 ENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSP 1435

Query: 331  GYGNRQ 336
            G G ++
Sbjct: 1436 GKGRKK 1441


>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
          Length = 2492

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 33/186 (17%)

Query: 152  ASQRQAKIQRYKQKKELEHRLSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIESI 211
            +   ++K  RY+ +  L H+L+   S  ESG+    + +E+  +  +    +S E+ E  
Sbjct: 1326 SDSEESKKPRYRHRL-LRHKLTV--SDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDS 1382

Query: 212  DQEIKILRERDSSREASTSNSSRQERPPVKPFILTRNMAQAKVFGAGYPSLPTMTVSDWY 271
            D      +E   S E S S   ++ R        TR+  +A++                 
Sbjct: 1383 D-----FQESGVSEEVSESEDEQRPR--------TRSAKKAEL----------------E 1413

Query: 272  EQHRKYGALPDQGIAKAAPEEFRK-AAQQQEEQEEKEEEDDEQTLHRAREWDDWKDTHPR 330
            E  R Y     +   K   +   +  +  +EE+EEKEEE++E+      E D+  D+   
Sbjct: 1414 ENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDENDDSKSP 1473

Query: 331  GYGNRQ 336
            G G ++
Sbjct: 1474 GKGRKK 1479


>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
          Length = 1257

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 4/68 (5%)

Query: 172 LSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERD---SSREAS 228
           L A+KS  E  +A DE+VRE   + L+R +    EE+ + +QEI  LRE++     + AS
Sbjct: 174 LKALKSLFEHHKALDEKVRERLRVSLER-VSALEEELAAANQEIVALREQNVHIQRKMAS 232

Query: 229 TSNSSRQE 236
           +  S+  E
Sbjct: 233 SEGSTESE 240



 Score = 28.5 bits (62), Expect = 9.0
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 27/112 (24%)

Query: 130 MNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQK---------------KELEHRLSA 174
           MN+  EN  AN       +     Q Q +++  +QK                EL  R++A
Sbjct: 360 MNDKLENELANKEAILRQMEEKNRQLQERLELAEQKLQQTMRKAETLPEVEAELAQRIAA 419

Query: 175 MKSAVESGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSRE 226
           +  A E     +ER+R     HL+        ++E  +QE++  R+R+   E
Sbjct: 420 LTKAEERHGNIEERMR-----HLE-------GQLEEKNQELQRARQREKMNE 459


>gi|40805858 isthmin 2 homolog isoform 1 [Homo sapiens]
          Length = 571

 Score = 35.0 bits (79), Expect = 0.096
 Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 17/152 (11%)

Query: 177 SAVESGQADDERVREY--YLLHLQRWIDISLEEIESI--DQEIKILRERDSSREASTSNS 232
           +A+  G A   R +E    LL LQ+  ++    + +   D ++ I    D   E S    
Sbjct: 168 AALTPGNATPPRTQEVTPLLLELQKLPELVHATLSTPNPDNQVTIKVVEDPQAEVSIDLL 227

Query: 233 SRQERPPVKPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPDQGIAKAAPEE 292
           +    PP +  +            +  P+L +    D Y+   K  A  ++G  K   E+
Sbjct: 228 AEPSNPPPQDTL------------SWLPALWSFLWGD-YKGEEKDRAPGEKGEEKEEDED 274

Query: 293 FRKAAQQQEEQEEKEEEDDEQTLHRAREWDDW 324
           +     + E+QE+KEE+++EQ L      D+W
Sbjct: 275 YPSEDIEGEDQEDKEEDEEEQALWFNGTTDNW 306


>gi|224809419 Homer, neuronal immediate early gene, 3 isoform 3
           [Homo sapiens]
          Length = 325

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 135 ENHTANSSMAYPSLVAMASQR---QAKIQRYKQKK-ELEHRLSAMKSAVESGQADDERVR 190
           E  T  S    P     A++R   Q K+Q  + +  ELEH+L AM+ ++E  +A+ ER R
Sbjct: 234 EIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAERERAR 293

Query: 191 EYYLLHLQRWIDISLEEIESIDQEIKILRE 220
              +    + +D+SL E+  + + +  L E
Sbjct: 294 A-EVGRAAQLLDVSLFELSELREGLARLAE 322


>gi|224809414 Homer, neuronal immediate early gene, 3 isoform 1
           [Homo sapiens]
          Length = 361

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 135 ENHTANSSMAYPSLVAMASQR---QAKIQRYKQKK-ELEHRLSAMKSAVESGQADDERVR 190
           E  T  S    P     A++R   Q K+Q  + +  ELEH+L AM+ ++E  +A+ ER R
Sbjct: 270 EIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAERERAR 329

Query: 191 EYYLLHLQRWIDISLEEIESIDQEIKILRE 220
              +    + +D+SL E+  + + +  L E
Sbjct: 330 A-EVGRAAQLLDVSLFELSELREGLARLAE 358


>gi|224809408 Homer, neuronal immediate early gene, 3 isoform 1
           [Homo sapiens]
          Length = 361

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%)

Query: 135 ENHTANSSMAYPSLVAMASQR---QAKIQRYKQKK-ELEHRLSAMKSAVESGQADDERVR 190
           E  T  S    P     A++R   Q K+Q  + +  ELEH+L AM+ ++E  +A+ ER R
Sbjct: 270 EIQTLKSQTGGPREALEAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAERERAR 329

Query: 191 EYYLLHLQRWIDISLEEIESIDQEIKILRE 220
              +    + +D+SL E+  + + +  L E
Sbjct: 330 A-EVGRAAQLLDVSLFELSELREGLARLAE 358


>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
            sapiens]
          Length = 1362

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 18/126 (14%)

Query: 207  EIESIDQEIKILR--ERDSSREASTSNSSRQERP--PVKPF--ILTRNMAQAKVFGAGYP 260
            E++ +D    ++R  E+++    +     +++ P  PV P   +  +NM         +P
Sbjct: 1151 EMKPVDVGRPVIRPPEQNAPPPGAPDKDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHP 1210

Query: 261  SLPTMTV---SDWYEQHRKYGALPDQGIAKAAPEEFRKAAQQQEEQEEKEEEDDEQTLHR 317
            + P+ T    SD +EQ R+         A    EE  KA + Q E  EKE+E   Q   R
Sbjct: 1211 TTPSSTAKSSSDSFEQFRR---------AAREKEEREKALKAQAEHAEKEKERLRQERMR 1261

Query: 318  AREWDD 323
            +RE +D
Sbjct: 1262 SREDED 1267


>gi|32189362 PTPRF interacting protein alpha 3 [Homo sapiens]
          Length = 1194

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 172 LSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREA 227
           L A+KS  E  +A DE+VRE   + L+R + +  EE+E  +QE   LRE+ S R +
Sbjct: 153 LKALKSLFEHHKALDEKVRERLRMALER-VAVLEEELELSNQETLNLREQLSRRRS 207


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 7/105 (6%)

Query: 223 SSREASTSNSSRQERPPVKPFILTRNMA-QAKVFGAGYPS----LPTMTVSDWYEQHRKY 277
           SS   S S+SS    PP  P       A +  ++   +P+     P       Y+     
Sbjct: 195 SSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTDEAYSPPPAPEQKYDPFEPT 254

Query: 278 GALPDQGIAKAAPEEFRKAAQQQEEQEEKEEEDD--EQTLHRARE 320
           G+ P       +PEE  +  +++EE+EE EEE++   Q++ R  E
Sbjct: 255 GSNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQSISRISE 299



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 12/34 (35%), Positives = 23/34 (67%)

Query: 280  LPDQGIAKAAPEEFRKAAQQQEEQEEKEEEDDEQ 313
            LP++   +A      +  +++EE+EE+EEE++EQ
Sbjct: 1007 LPEEATEEAGVRGGAEEEEEEEEEEEEEEEEEEQ 1040


>gi|29171753 PTPRF interacting protein alpha 1 isoform a [Homo
           sapiens]
          Length = 1185

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)

Query: 172 LSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREASTSN 231
           L A+KS  E  +A DE+VRE   + L+R   +  EE+ +  +E+ IL+E+++ ++  T  
Sbjct: 161 LKALKSLFEHHKALDEKVRERLRVALER-CSLLEEELGATHKELMILKEQNNQKKTLTDG 219

Query: 232 ----SSRQERPP 239
               +  QE  P
Sbjct: 220 VLDINHEQENTP 231


>gi|4505983 PTPRF interacting protein alpha 1 isoform b [Homo
           sapiens]
          Length = 1202

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)

Query: 172 LSAMKSAVESGQADDERVREYYLLHLQRWIDISLEEIESIDQEIKILRERDSSREASTSN 231
           L A+KS  E  +A DE+VRE   + L+R   +  EE+ +  +E+ IL+E+++ ++  T  
Sbjct: 161 LKALKSLFEHHKALDEKVRERLRVALER-CSLLEEELGATHKELMILKEQNNQKKTLTDG 219

Query: 232 ----SSRQERPP 239
               +  QE  P
Sbjct: 220 VLDINHEQENTP 231


>gi|118600967 shroom family member 4 [Homo sapiens]
          Length = 1493

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 13/90 (14%)

Query: 250  AQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPDQGIAKAAPEEFRKAAQQQEEQEEKEEE 309
            A+ K F    P  P       +E++R + A   Q       ++ ++  +QQEE+EE+EEE
Sbjct: 1094 ARKKAFPPPRPPPPN------WEKYRLFRAAQQQ-------KQQQQQQKQQEEEEEEEEE 1140

Query: 310  DDEQTLHRAREWDDWKDTHPRGYGNRQNMG 339
            ++E+      E ++ ++  P  Y + +  G
Sbjct: 1141 EEEEEEEEEEEAEEEEEELPPQYFSSETSG 1170


>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
           sapiens]
          Length = 505

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 281 PDQGIAKAAPEEFRKAAQQQEEQEEKEEEDDEQTLHRAREWDD 323
           P  GI  A  E  +K ++     +E E+EDDE+      EW+D
Sbjct: 463 PTSGIVGALMEVMQKRSKAIHSSDEDEDEDDEEDFEDDDEWED 505


>gi|38044112 restin isoform b [Homo sapiens]
          Length = 1392

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)

Query: 4    EDELQLPRLPELFETGRQLLDEVEVATEPAGSRIVQ-EKVFKGLDL-LEKAAEMLSQLDL 61
            E ELQ+  L E F    +    V+ + +   +++ Q E+ F  L   LEK  E L+ ++ 
Sbjct: 804  EKELQI--LKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEA 861

Query: 62   FSRNEDLEEIASTDLKYLLVPAFQGALTMKQVNPSK--RLDHLQRAREHFINYLTQCHCY 119
              R +D  E      K  L       + M   N S+  +++   R +E  +  L      
Sbjct: 862  KFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEEL------ 915

Query: 120  HVAEFELPKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAV 179
               + +L K   N++    +   M   ++ A  SQ++A  +  ++KKELE +LS ++  +
Sbjct: 916  ---QLKLTKANENASFLQKSIEDM---TVKAEQSQQEAAKKHEEEKKELERKLSDLEKKM 969

Query: 180  ESGQADDERVREYY---------------------LLHLQRWIDISLEEIESIDQEIKIL 218
            E+     + ++  Y                     LL  +  +  + EE   + QE++ L
Sbjct: 970  ETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEEL 1029

Query: 219  RER-DSSREASTSNSSRQ 235
            R++ D ++ A T+  + Q
Sbjct: 1030 RKQADKAKAAQTAEDAMQ 1047


>gi|4506751 restin isoform a [Homo sapiens]
          Length = 1427

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)

Query: 4    EDELQLPRLPELFETGRQLLDEVEVATEPAGSRIVQ-EKVFKGLDL-LEKAAEMLSQLDL 61
            E ELQ+  L E F    +    V+ + +   +++ Q E+ F  L   LEK  E L+ ++ 
Sbjct: 839  EKELQI--LKEKFAEASEEAVSVQRSMQETVNKLHQKEEQFNMLSSDLEKLRENLADMEA 896

Query: 62   FSRNEDLEEIASTDLKYLLVPAFQGALTMKQVNPSK--RLDHLQRAREHFINYLTQCHCY 119
              R +D  E      K  L       + M   N S+  +++   R +E  +  L      
Sbjct: 897  KFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLKERDVEEL------ 950

Query: 120  HVAEFELPKTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMKSAV 179
               + +L K   N++    +   M   ++ A  SQ++A  +  ++KKELE +LS ++  +
Sbjct: 951  ---QLKLTKANENASFLQKSIEDM---TVKAEQSQQEAAKKHEEEKKELERKLSDLEKKM 1004

Query: 180  ESGQADDERVREYY---------------------LLHLQRWIDISLEEIESIDQEIKIL 218
            E+     + ++  Y                     LL  +  +  + EE   + QE++ L
Sbjct: 1005 ETSHNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEEL 1064

Query: 219  RER-DSSREASTSNSSRQ 235
            R++ D ++ A T+  + Q
Sbjct: 1065 RKQADKAKAAQTAEDAMQ 1082


>gi|189011559 B-cell scaffold protein with ankyrin repeats 1 isoform
           3 [Homo sapiens]
          Length = 652

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 227 ASTSNSSRQ----ERPPVKPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPD 282
           A   N+S++     RPP+ P    R +A A      + +LP   V    E+ + +G    
Sbjct: 361 ADPENNSQEPLMSSRPPLPP---PRPVANAFQLERPHFTLPGTMVEGQMERSQNWG---H 414

Query: 283 QGIAKAAPEEFRKAAQQQEEQEEKEEEDDEQT 314
            G+ +   +E +   +++EE++E+EEE+D  T
Sbjct: 415 PGVRQETGDEPKGEKEKKEEEKEQEEEEDPYT 446


>gi|144953889 B-cell scaffold protein with ankyrin repeats 1 isoform
           2 [Homo sapiens]
          Length = 755

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 227 ASTSNSSRQ----ERPPVKPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPD 282
           A   N+S++     RPP+ P    R +A A      + +LP   V    E+ + +G    
Sbjct: 464 ADPENNSQEPLMSSRPPLPP---PRPVANAFQLERPHFTLPGTMVEGQMERSQNWG---H 517

Query: 283 QGIAKAAPEEFRKAAQQQEEQEEKEEEDDEQT 314
            G+ +   +E +   +++EE++E+EEE+D  T
Sbjct: 518 PGVRQETGDEPKGEKEKKEEEKEQEEEEDPYT 549


>gi|144953891 B-cell scaffold protein with ankyrin repeats 1 isoform
           1 [Homo sapiens]
          Length = 785

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 10/92 (10%)

Query: 227 ASTSNSSRQ----ERPPVKPFILTRNMAQAKVFGAGYPSLPTMTVSDWYEQHRKYGALPD 282
           A   N+S++     RPP+ P    R +A A      + +LP   V    E+ + +G    
Sbjct: 494 ADPENNSQEPLMSSRPPLPP---PRPVANAFQLERPHFTLPGTMVEGQMERSQNWG---H 547

Query: 283 QGIAKAAPEEFRKAAQQQEEQEEKEEEDDEQT 314
            G+ +   +E +   +++EE++E+EEE+D  T
Sbjct: 548 PGVRQETGDEPKGEKEKKEEEKEQEEEEDPYT 579


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.128    0.362 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,558,201
Number of Sequences: 37866
Number of extensions: 546899
Number of successful extensions: 8541
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 150
Number of HSP's that attempted gapping in prelim test: 6187
Number of HSP's gapped (non-prelim): 1607
length of query: 339
length of database: 18,247,518
effective HSP length: 103
effective length of query: 236
effective length of database: 14,347,320
effective search space: 3385967520
effective search space used: 3385967520
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.