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Search of human proteins with 4506367
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
(220 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 447 e-126
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens] 384 e-107
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens] 357 4e-99
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens] 352 1e-97
gi|16933567 mel transforming oncogene [Homo sapiens] 209 1e-54
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 205 3e-53
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 196 1e-50
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 194 6e-50
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 187 6e-48
gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens] 186 2e-47
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 185 2e-47
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 184 5e-47
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 184 5e-47
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 184 5e-47
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 179 2e-45
gi|34485711 Ras-related protein Rab-27A [Homo sapiens] 178 4e-45
gi|34485709 Ras-related protein Rab-27A [Homo sapiens] 178 4e-45
gi|34485706 Ras-related protein Rab-27A [Homo sapiens] 178 4e-45
gi|19923264 Ras-related protein Rab-27A [Homo sapiens] 178 4e-45
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 171 4e-43
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 159 2e-39
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 158 3e-39
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 157 9e-39
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 156 1e-38
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 156 1e-38
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s... 156 1e-38
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 154 4e-38
gi|19923483 GTPase Rab14 [Homo sapiens] 154 6e-38
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 152 3e-37
gi|50234889 RAB43 protein [Homo sapiens] 152 3e-37
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 447 bits (1150), Expect = e-126
Identities = 220/220 (100%), Positives = 220/220 (100%)
Query: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
Sbjct: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
Sbjct: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
Query: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV
Sbjct: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
Query: 181 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC
Sbjct: 181 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
Length = 227
Score = 384 bits (987), Expect = e-107
Identities = 185/220 (84%), Positives = 204/220 (92%), Gaps = 1/220 (0%)
Query: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
MASA D+RYGQK+SSDQNFDYMFK+LIIGNSSVGKTSFLFRYADDSFT AFVSTVGIDFK
Sbjct: 9 MASAQDARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFK 68
Query: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
VKT+++N+KRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI
Sbjct: 69 VKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 128
Query: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
KTYSWDNAQV+LVGNKCDMEDERV+S+ERG+ L + LGFEFFE SAKDNINVKQTFERLV
Sbjct: 129 KTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLV 188
Query: 181 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
D+IC+KMSESL+T DPA+T AKQ +L + PP +CAC
Sbjct: 189 DIICDKMSESLET-DPAITAAKQNTRLKETPPPPQPNCAC 227
>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 357 bits (916), Expect = 4e-99
Identities = 171/220 (77%), Positives = 200/220 (90%), Gaps = 1/220 (0%)
Query: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
MAS TD + G K++SDQNFDYMFK+LIIGNSSVGKTSFLFRYADD+FTPAFVSTVGIDFK
Sbjct: 1 MASVTDGKTGVKDASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFK 60
Query: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
VKT+YR++KR+KLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDW+TQI
Sbjct: 61 VKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI 120
Query: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
KTYSWDNAQV+LVGNKCDME+ERVV +E+G+ LA+ LGF+FFEASAK+NI+V+Q FERLV
Sbjct: 121 KTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLV 180
Query: 181 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
D IC+KMS+SLDT DP++ G+ + +LSD Q+C+C
Sbjct: 181 DAICDKMSDSLDT-DPSMLGSSKNTRLSDTPPLLQQNCSC 219
>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 352 bits (904), Expect = 1e-97
Identities = 170/220 (77%), Positives = 195/220 (88%), Gaps = 1/220 (0%)
Query: 1 MASATDSRYGQKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
MASA D++ G ++++DQNFDYMFK+L+IGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK
Sbjct: 1 MASAGDTQAGPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFK 60
Query: 61 VKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120
VKT+YR+DKRIKLQIWDTAGQERYRTITTAYYRGAMGF+LMYDI N+ESF AVQDW+TQI
Sbjct: 61 VKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI 120
Query: 121 KTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLV 180
KTYSWDNAQV+LVGNKCD+EDERVV +E GR+LAD LGFEFFEASAK+NINVKQ FERLV
Sbjct: 121 KTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV 180
Query: 181 DVICEKMSESLDTADPAVTGAKQGPQLSDQQVPPHQDCAC 220
DVICEKM+ESL+ + + + K GP + D P C+C
Sbjct: 181 DVICEKMNESLEPSSSSGSNGK-GPAVGDAPAPQPSSCSC 219
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 209 bits (533), Expect = 1e-54
Identities = 101/195 (51%), Positives = 143/195 (73%), Gaps = 2/195 (1%)
Query: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
+ +DY+FK+L+IG+S VGKT LFR+++D+F F+ST+GIDFK++TI + KRIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
DTAGQER+RTITTAYYRGAMG +L+YDITNE+SF+ +++W I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADP 196
CD+ D+R VS ERG +LA G +F E SAK NINV+ F L I KM + L+ P
Sbjct: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
Query: 197 AVTGAKQGPQLSDQQ 211
G+ QG +++ Q
Sbjct: 183 --QGSNQGVKITPDQ 195
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 205 bits (521), Expect = 3e-53
Identities = 94/184 (51%), Positives = 138/184 (75%)
Query: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
+ +DY+FK+L+IG+S VGKT LFR+++D+F F+ST+GIDFK++TI + K+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
DTAGQER+RTITTAYYRGAMG +L+YDITNE+SF+ +++W I+ ++ + + +++GNK
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADP 196
CDM D+R VS ERG +LA G +F E SAK + NV++ F L I K++ ++ ++
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNS 182
Query: 197 AVTG 200
A G
Sbjct: 183 AGAG 186
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 196 bits (498), Expect = 1e-50
Identities = 97/193 (50%), Positives = 136/193 (70%), Gaps = 7/193 (3%)
Query: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
+ +D +FK+L+IG+S VGKT LFR++DD+F F+ST+GIDFK+KT+ K+IKLQIW
Sbjct: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
Query: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
DTAGQER+ TITT+YYRGAMG +L+YDITN +SF + W I ++ ++ + +L+GNK
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
Query: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKM------SES 190
CDM+D+RVV +G Q+A G FFE SAK NIN+++ F L + I K SE+
Sbjct: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSEN 183
Query: 191 LD-TADPAVTGAK 202
+D ++ VTG K
Sbjct: 184 VDISSGGGVTGWK 196
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 194 bits (492), Expect = 6e-50
Identities = 93/203 (45%), Positives = 136/203 (66%), Gaps = 6/203 (2%)
Query: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
S + +DY+FK+L+IG+S VGK+ L R+ADD++T +++ST+G+DFK++TI + K IKL
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLV 133
QIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W +I Y+ +N LLV
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLV 122
Query: 134 GNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDT 193
GNKCD+ ++VV ++ AD LG F E SAK+ NV+Q+F + I ++M
Sbjct: 123 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG--- 179
Query: 194 ADPAVTGAKQGPQLSDQQVPPHQ 216
A G + + Q P Q
Sbjct: 180 ---ATAGGAEKSNVKIQSTPVKQ 199
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 187 bits (475), Expect = 6e-48
Identities = 86/161 (53%), Positives = 120/161 (74%)
Query: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78
+D++FK+L+IG+S VGKT + R+A+D+F ++ST+GIDFK++T+ K+IKLQ+WDT
Sbjct: 5 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 64
Query: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138
AGQER++TITTAYYRGAMG IL+YDIT+E+SF +Q+W IK + + LL+GNKCD
Sbjct: 65 AGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCD 124
Query: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 179
ME +R V E+ +LA G FFE SAK ++NV + F L
Sbjct: 125 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 165
>gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 186 bits (471), Expect = 2e-47
Identities = 88/219 (40%), Positives = 145/219 (66%), Gaps = 15/219 (6%)
Query: 15 SDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDK----- 69
+D ++DY+ K+L +G+S VGKT+FL+RY D+ F P F++TVGIDF+ K + N +
Sbjct: 2 TDGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGS 61
Query: 70 -----RIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS 124
++ LQ+WDTAGQER+R++TTA++R AMGF+LM+D+T+++SF V++W +Q++ +
Sbjct: 62 SGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANA 121
Query: 125 W-DNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 183
+ +N ++L+GNK D+ D+R V+ + R+LAD G +FE SA NV++ E L+D+I
Sbjct: 122 YCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLI 181
Query: 184 CEKMSESLDTAD--PAVTGAKQGPQLSDQQVPPHQDCAC 220
++M + ++ V G G D + PP + C C
Sbjct: 182 MKRMEQCVEKTQIPDTVNGGNSGN--LDGEKPPEKKCIC 218
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 185 bits (470), Expect = 2e-47
Identities = 88/195 (45%), Positives = 130/195 (66%), Gaps = 7/195 (3%)
Query: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78
+DY+FK+L+IG+S VGK+ L R+ADD++T +++ST+G+DFK++TI + K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138
AGQER+RTIT++YYRGA G I++YD+T++ES+ V+ W +I Y+ +N LLVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 124
Query: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAV 198
+ ++VV + ++ AD LG F E SAK+ NV+Q F + I ++M P
Sbjct: 125 LTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG-------PGA 177
Query: 199 TGAKQGPQLSDQQVP 213
+ P L P
Sbjct: 178 ASGGERPNLKIDSTP 192
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 184 bits (467), Expect = 5e-47
Identities = 85/161 (52%), Positives = 118/161 (73%)
Query: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78
+D++FK+L+IG+S VGKT + R+A+D+F ++ST+GIDFK++T+ K+IKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
Query: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138
AGQER++TITTAYYRGAMG IL YDIT+E+SF +Q+W I + + LL+GNKCD
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
Query: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 179
ME +R V E+ +LA G FFE SAK ++NV + F L
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 184 bits (467), Expect = 5e-47
Identities = 85/161 (52%), Positives = 118/161 (73%)
Query: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78
+D++FK+L+IG+S VGKT + R+A+D+F ++ST+GIDFK++T+ K+IKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
Query: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138
AGQER++TITTAYYRGAMG IL YDIT+E+SF +Q+W I + + LL+GNKCD
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
Query: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 179
ME +R V E+ +LA G FFE SAK ++NV + F L
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 184 bits (467), Expect = 5e-47
Identities = 85/161 (52%), Positives = 118/161 (73%)
Query: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78
+D++FK+L+IG+S VGKT + R+A+D+F ++ST+GIDFK++T+ K+IKLQ+WDT
Sbjct: 129 YDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDT 188
Query: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138
AGQER++TITTAYYRGAMG IL YDIT+E+SF +Q+W I + + LL+GNKCD
Sbjct: 189 AGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNKCD 248
Query: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERL 179
ME +R V E+ +LA G FFE SAK ++NV + F L
Sbjct: 249 MEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSL 289
>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
Length = 244
Score = 179 bits (454), Expect = 2e-45
Identities = 89/204 (43%), Positives = 133/204 (65%), Gaps = 3/204 (1%)
Query: 20 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTA 79
D+ +++IIG+ VGKTS + R+ DD+F A STVG+DFK+KT+ K+I+LQIWDTA
Sbjct: 40 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99
Query: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDM 139
GQER+ +IT+AYYR A G IL+YDIT +E+F+ + W I Y+ ++A++LLVGNK D
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDC 159
Query: 140 EDERVVSSERGRQLADHL-GFEFFEASAKDNINVKQTFERLVDVICEKMSESL--DTADP 196
E +R ++ ++G + A + G F EASAKDN NV + F +LVD I +KM + +
Sbjct: 160 ETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSN 219
Query: 197 AVTGAKQGPQLSDQQVPPHQDCAC 220
++ + P++ + PP C
Sbjct: 220 SILSLQPEPEIPPELPPPRPHVRC 243
>gi|34485711 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 178 bits (451), Expect = 4e-45
Identities = 91/218 (41%), Positives = 139/218 (63%), Gaps = 12/218 (5%)
Query: 15 SDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVK-TIYR------- 66
SD ++DY+ K L +G+S VGKTS L++Y D F F++TVGIDF+ K +YR
Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGA 61
Query: 67 --NDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS 124
+RI LQ+WDTAGQER+R++TTA++R AMGF+L++D+TNE+SF V++W +Q++ ++
Sbjct: 62 TGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHA 121
Query: 125 W-DNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 183
+ +N ++L GNK D+ED+RVV E LA+ G +FE SA + N+ Q E L+D+I
Sbjct: 122 YCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLI 181
Query: 184 CEKMSESLDTA-DPAVTGAKQGPQLSDQQVPPHQDCAC 220
++M +D + P G +DQ + AC
Sbjct: 182 MKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219
>gi|34485709 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 178 bits (451), Expect = 4e-45
Identities = 91/218 (41%), Positives = 139/218 (63%), Gaps = 12/218 (5%)
Query: 15 SDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVK-TIYR------- 66
SD ++DY+ K L +G+S VGKTS L++Y D F F++TVGIDF+ K +YR
Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGA 61
Query: 67 --NDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS 124
+RI LQ+WDTAGQER+R++TTA++R AMGF+L++D+TNE+SF V++W +Q++ ++
Sbjct: 62 TGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHA 121
Query: 125 W-DNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 183
+ +N ++L GNK D+ED+RVV E LA+ G +FE SA + N+ Q E L+D+I
Sbjct: 122 YCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLI 181
Query: 184 CEKMSESLDTA-DPAVTGAKQGPQLSDQQVPPHQDCAC 220
++M +D + P G +DQ + AC
Sbjct: 182 MKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219
>gi|34485706 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 178 bits (451), Expect = 4e-45
Identities = 91/218 (41%), Positives = 139/218 (63%), Gaps = 12/218 (5%)
Query: 15 SDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVK-TIYR------- 66
SD ++DY+ K L +G+S VGKTS L++Y D F F++TVGIDF+ K +YR
Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGA 61
Query: 67 --NDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS 124
+RI LQ+WDTAGQER+R++TTA++R AMGF+L++D+TNE+SF V++W +Q++ ++
Sbjct: 62 TGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHA 121
Query: 125 W-DNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 183
+ +N ++L GNK D+ED+RVV E LA+ G +FE SA + N+ Q E L+D+I
Sbjct: 122 YCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLI 181
Query: 184 CEKMSESLDTA-DPAVTGAKQGPQLSDQQVPPHQDCAC 220
++M +D + P G +DQ + AC
Sbjct: 182 MKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219
>gi|19923264 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 178 bits (451), Expect = 4e-45
Identities = 91/218 (41%), Positives = 139/218 (63%), Gaps = 12/218 (5%)
Query: 15 SDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVK-TIYR------- 66
SD ++DY+ K L +G+S VGKTS L++Y D F F++TVGIDF+ K +YR
Sbjct: 2 SDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGA 61
Query: 67 --NDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYS 124
+RI LQ+WDTAGQER+R++TTA++R AMGF+L++D+TNE+SF V++W +Q++ ++
Sbjct: 62 TGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHA 121
Query: 125 W-DNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVI 183
+ +N ++L GNK D+ED+RVV E LA+ G +FE SA + N+ Q E L+D+I
Sbjct: 122 YCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLI 181
Query: 184 CEKMSESLDTA-DPAVTGAKQGPQLSDQQVPPHQDCAC 220
++M +D + P G +DQ + AC
Sbjct: 182 MKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKEKGAC 219
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 171 bits (433), Expect = 4e-43
Identities = 77/175 (44%), Positives = 128/175 (73%), Gaps = 1/175 (0%)
Query: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
+++D++FK+LIIG+S VGK+S L R+AD++F+ ++++T+G+DFK++T+ N +++KLQIW
Sbjct: 3 RDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIW 62
Query: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
DTAGQER+RTIT+ YYRG G I++YD+T+ ESF V+ W +I + D+ +LVGNK
Sbjct: 63 DTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNK 121
Query: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
D + +VV +E + A +G + FE SAK+N+NV++ F + +++ ++L
Sbjct: 122 NDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNL 176
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 159 bits (401), Expect = 2e-39
Identities = 79/202 (39%), Positives = 122/202 (60%), Gaps = 1/202 (0%)
Query: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQI 75
D +DY+FK+++IG+S VGK++ L R+ + F ST+G++F ++I + K IK QI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 76 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGN 135
WDTAGQERYR IT+AYYRGA+G +L+YDI ++ V+ W +++ ++ N ++LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 136 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTAD 195
K D+ R V ++ R A+ F E SA D+ NV++ F+ ++ I +S+ AD
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQK-QIAD 183
Query: 196 PAVTGAKQGPQLSDQQVPPHQD 217
A G + D VPP D
Sbjct: 184 RAAHDESPGNNVVDISVPPTTD 205
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 158 bits (400), Expect = 3e-39
Identities = 75/176 (42%), Positives = 118/176 (67%), Gaps = 3/176 (1%)
Query: 15 SDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ 74
S +++D++FKI++IGN+ VGKT + R+ F P +T+G+DF +KT+ N +++KLQ
Sbjct: 2 SMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQ 61
Query: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVG 134
IWDTAGQER+R+IT +YYR A IL YDIT EESF + +W +I+ Y+ + +LVG
Sbjct: 62 IWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVG 121
Query: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSES 190
NK D+ + R VS +R + ++ + E SAK++ NV++ F +D+ C +SE+
Sbjct: 122 NKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLF---LDLACRLISEA 174
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 157 bits (396), Expect = 9e-39
Identities = 74/160 (46%), Positives = 110/160 (68%), Gaps = 1/160 (0%)
Query: 18 NFDYMFKILIIGNSSVGKTSFLFRYADDSF-TPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
++D K++++G++ VGKT FL ++ D +F + F++TVGIDF+ K + + R+KLQIW
Sbjct: 25 SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
Query: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
DTAGQER+R++T AYYR A +L+YDITN+ SF+ ++ W T+I Y+ + ++L+GNK
Sbjct: 85 DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
Query: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTF 176
DM ERV+ SE G LA G F E SAK +NV+ F
Sbjct: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 184
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 156 bits (395), Expect = 1e-38
Identities = 78/188 (41%), Positives = 111/188 (59%)
Query: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78
+ Y+FK +IIG++ VGK+ L ++ D F P T+G++F + I + K+IKLQIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138
AGQE +R+IT +YYRGA G +L+YDIT ++FN + W + +S N ++L+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAV 198
+E R V E G A G F E SAK NV++ F I EK+ E + +
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 199 TGAKQGPQ 206
G K GPQ
Sbjct: 183 NGIKIGPQ 190
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 156 bits (394), Expect = 1e-38
Identities = 78/190 (41%), Positives = 110/190 (57%)
Query: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDT 78
+ Y+FK +IIG++ VGK+ L ++ D F P T+G++F + + + K+IKLQIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62
Query: 79 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCD 138
AGQE +R+IT +YYRGA G +L+YDIT E+FN + W + +S N ++L+GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSD 122
Query: 139 MEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADPAV 198
+E R V E G A G F E SAK NV++ F I K+ + L
Sbjct: 123 LESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEA 182
Query: 199 TGAKQGPQLS 208
G K GPQ S
Sbjct: 183 NGIKIGPQQS 192
>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
sapiens]
Length = 731
Score = 156 bits (394), Expect = 1e-38
Identities = 79/176 (44%), Positives = 115/176 (65%)
Query: 11 QKESSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKR 70
++ESS D +FKI+ +GNS+VGKTSFL R+ +D F+P +TVGID++VKT+ ++ +
Sbjct: 534 KEESSPSAPDRLFKIVFVGNSAVGKTSFLRRFCEDRFSPGMAATVGIDYRVKTLNVDNSQ 593
Query: 71 IKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQV 130
+ LQ+WDTAGQERYR IT ++R A G I+MYD+T+++SF +V+ W + ++ D V
Sbjct: 594 VALQLWDTAGQERYRCITQQFFRKADGVIVMYDLTDKQSFLSVRRWLSSVEEAVGDRVPV 653
Query: 131 LLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 186
LL+GNK D E ER V G QLA F+E SA N K++ L + E+
Sbjct: 654 LLLGNKLDNEKEREVPRGLGEQLATENNLIFYECSAYSGHNTKESLLHLARFLKEQ 709
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 154 bits (390), Expect = 4e-38
Identities = 74/159 (46%), Positives = 106/159 (66%), Gaps = 1/159 (0%)
Query: 19 FDYMFKILIIGNSSVGKTSFLFRYADDSFTPA-FVSTVGIDFKVKTIYRNDKRIKLQIWD 77
+D FK++++G+S VGKT L R+ D +F F+STVGIDF+ K + + ++KLQ+WD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119
Query: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKC 137
TAGQER+R++T AYYR A +L+YD+TN+ SF+ +Q W T+I Y+ + ++L+GNK
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179
Query: 138 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTF 176
D ERVV E G +LA G F E SAK +NV F
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAF 218
>gi|19923483 GTPase Rab14 [Homo sapiens]
Length = 215
Score = 154 bits (389), Expect = 6e-38
Identities = 77/209 (36%), Positives = 121/209 (57%), Gaps = 6/209 (2%)
Query: 18 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWD 77
N+ Y+FK +IIG+ VGK+ L ++ + F T+G++F + I + ++IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKC 137
TAGQER+R +T +YYRGA G +++YDIT ++N + W T + + N ++L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 138 DMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE---SLDTA 194
D+E +R V+ E +Q A+ G F EASAK NV+ F I + + + L+ A
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 195 DPAV---TGAKQGPQLSDQQVPPHQDCAC 220
+ V A QG +L+ + P + C C
Sbjct: 187 ESGVQHKPSAPQGGRLTSEPQPQREGCGC 215
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 152 bits (383), Expect = 3e-37
Identities = 71/174 (40%), Positives = 112/174 (64%)
Query: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQI 75
D +DY+FK+++IG+S VGK++ L R+ + F ST+G++F ++I + K IK QI
Sbjct: 5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQI 64
Query: 76 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGN 135
WDTAGQERYR IT+AYYRGA+G +L+YDI ++ V+ W +++ ++ N ++LVGN
Sbjct: 65 WDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGN 124
Query: 136 KCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSE 189
K D+ R V ++ R A+ G F E SA D+ NV+ F+ ++ I +S+
Sbjct: 125 KSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQ 178
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 152 bits (383), Expect = 3e-37
Identities = 75/165 (45%), Positives = 109/165 (66%), Gaps = 1/165 (0%)
Query: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQI 75
D+ +D++FK++++G++SVGKT + R+ +F+ ST+G+DF +KT+ KR+KLQI
Sbjct: 12 DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQI 71
Query: 76 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGN 135
WDTAGQER+RTIT +YYR A G IL YDIT SF +V W ++ Y+ N LL+GN
Sbjct: 72 WDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGN 131
Query: 136 KCDMEDERVVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERL 179
K D+ + R VS + LA+H E SAKD+ NV++ F R+
Sbjct: 132 KSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRV 176
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,288,308
Number of Sequences: 37866
Number of extensions: 262312
Number of successful extensions: 1056
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 646
Number of HSP's gapped (non-prelim): 249
length of query: 220
length of database: 18,247,518
effective HSP length: 98
effective length of query: 122
effective length of database: 14,536,650
effective search space: 1773471300
effective search space used: 1773471300
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.