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Search of human proteins with 4504695
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]
(280 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4504695 inhibitor of growth family, member 2 [Homo sapiens] 575 e-164
gi|38201667 inhibitor of growth family, member 1 isoform A [Homo... 330 1e-90
gi|38201663 inhibitor of growth family, member 1 isoform C [Homo... 282 3e-76
gi|38201661 inhibitor of growth family, member 1 isoform D [Homo... 282 3e-76
gi|38201665 inhibitor of growth family, member 1 isoform B [Homo... 256 1e-68
gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo... 172 3e-43
gi|18644730 inhibitor of growth family, member 5 [Homo sapiens] 172 4e-43
gi|189083821 inhibitor of growth family, member 4 isoform 9 [Hom... 169 3e-42
gi|189083828 inhibitor of growth family, member 4 isoform 4 [Hom... 166 3e-41
gi|189083826 inhibitor of growth family, member 4 isoform 3 [Hom... 166 3e-41
gi|189083830 inhibitor of growth family, member 4 isoform 5 [Hom... 140 2e-33
gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo... 112 5e-25
gi|189083832 inhibitor of growth family, member 4 isoform 6 [Hom... 73 3e-13
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 52 8e-07
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 52 8e-07
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens] 51 1e-06
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens] 50 3e-06
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens] 50 3e-06
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 49 5e-06
gi|27477095 nuclear receptor binding SET domain protein 1 isofor... 47 2e-05
gi|19923586 nuclear receptor binding SET domain protein 1 isofor... 47 2e-05
gi|38201659 inhibitor of growth family, member 3 isoform 3 [Homo... 45 9e-05
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 45 9e-05
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 45 9e-05
gi|51599156 chromodomain helicase DNA binding protein 4 [Homo sa... 44 2e-04
gi|38788260 bromodomain PHD finger transcription factor isoform ... 44 2e-04
gi|38788274 bromodomain PHD finger transcription factor isoform ... 44 2e-04
gi|153085395 histone deacetylase 4 [Homo sapiens] 43 3e-04
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ... 43 4e-04
gi|52630322 chromodomain helicase DNA binding protein 3 isoform ... 43 4e-04
>gi|4504695 inhibitor of growth family, member 2 [Homo sapiens]
Length = 280
Score = 575 bits (1481), Expect = e-164
Identities = 280/280 (100%), Positives = 280/280 (100%)
Query: 1 MLGQQQQQLYSSAALLTGERSRLLTCYVQDYLECVESLPHDMQRNVSVLRELDNKYQETL 60
MLGQQQQQLYSSAALLTGERSRLLTCYVQDYLECVESLPHDMQRNVSVLRELDNKYQETL
Sbjct: 1 MLGQQQQQLYSSAALLTGERSRLLTCYVQDYLECVESLPHDMQRNVSVLRELDNKYQETL 60
Query: 61 KEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRARQMEL 120
KEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRARQMEL
Sbjct: 61 KEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRARQMEL 120
Query: 121 HSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKE 180
HSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKE
Sbjct: 121 HSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKE 180
Query: 181 KKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHF 240
KKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHF
Sbjct: 181 KKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHF 240
Query: 241 SCVSLTYKPKGKWYCPKCRGDNEKTMDKSTEKTKKDRRSR 280
SCVSLTYKPKGKWYCPKCRGDNEKTMDKSTEKTKKDRRSR
Sbjct: 241 SCVSLTYKPKGKWYCPKCRGDNEKTMDKSTEKTKKDRRSR 280
>gi|38201667 inhibitor of growth family, member 1 isoform A [Homo
sapiens]
Length = 279
Score = 330 bits (845), Expect = 1e-90
Identities = 160/270 (59%), Positives = 206/270 (76%), Gaps = 11/270 (4%)
Query: 18 GERSRLLTCYVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKEDDLN 77
GE+ L+ YV+DYL+ +ESLP D+QRNVS++RE+D KYQE LKE+D+ YE++ +E D
Sbjct: 7 GEQLHLVN-YVEDYLDSIESLPFDLQRNVSLMREIDAKYQEILKELDECYERFSRETDGA 65
Query: 78 QKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAE-SERASD 136
QK+R+ +QRALI SQELGDEKIQIV+QM+ELVENR RQ++ H + F+ E + A +
Sbjct: 66 QKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGN 125
Query: 137 KAKMDSSQPER---------SSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAK 187
K + +P+ +S+R RRQR +E+R+ + +D PKEKK+K++K
Sbjct: 126 SGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSK 185
Query: 188 KKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTY 247
KKKRSKAK EREASP + IDPNEPTYCLCNQVSYGEMIGCDN++CPIEWFHFSCV L +
Sbjct: 186 KKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNH 245
Query: 248 KPKGKWYCPKCRGDNEKTMDKSTEKTKKDR 277
KPKGKWYCPKCRG+NEKTMDK+ EK+KK+R
Sbjct: 246 KPKGKWYCPKCRGENEKTMDKALEKSKKER 275
>gi|38201663 inhibitor of growth family, member 1 isoform C [Homo
sapiens]
Length = 235
Score = 282 bits (721), Expect = 3e-76
Identities = 136/230 (59%), Positives = 173/230 (75%), Gaps = 10/230 (4%)
Query: 58 ETLKEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRARQ 117
E LKE+D+ YE++ +E D QK+R+ +QRALI SQELGDEKIQIV+QM+ELVENR RQ
Sbjct: 2 EILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRTRQ 61
Query: 118 MELHSQCFQDPAE-SERASDKAKMDSSQPER---------SSRRPRRQRTSESRDLCHMA 167
++ H + F+ E + A + K + +P+ +S+R RRQR +E+R+
Sbjct: 62 VDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENASSN 121
Query: 168 NGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIG 227
+ +D PKEKK+K++KKKKRSKAK EREASP + IDPNEPTYCLCNQVSYGEMIG
Sbjct: 122 HDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEMIG 181
Query: 228 CDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDNEKTMDKSTEKTKKDR 277
CDN++CPIEWFHFSCV L +KPKGKWYCPKCRG+NEKTMDK+ EK+KK+R
Sbjct: 182 CDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKER 231
>gi|38201661 inhibitor of growth family, member 1 isoform D [Homo
sapiens]
Length = 422
Score = 282 bits (721), Expect = 3e-76
Identities = 135/232 (58%), Positives = 175/232 (75%), Gaps = 10/232 (4%)
Query: 56 YQETLKEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRA 115
+++ LKE+D+ YE++ +E D QK+R+ +QRALI SQELGDEKIQIV+QM+ELVENR
Sbjct: 187 WKQILKELDECYERFSRETDGAQKRRMLHCVQRALIRSQELGDEKIQIVSQMVELVENRT 246
Query: 116 RQMELHSQCFQDPAE-SERASDKAKMDSSQPER---------SSRRPRRQRTSESRDLCH 165
RQ++ H + F+ E + A + K + +P+ +S+R RRQR +E+R+
Sbjct: 247 RQVDSHVELFEAQQELGDTAGNSGKAGADRPKGEAAAQADKPNSKRSRRQRNNENRENAS 306
Query: 166 MANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEM 225
+ +D PKEKK+K++KKKKRSKAK EREASP + IDPNEPTYCLCNQVSYGEM
Sbjct: 307 SNHDHDDGASGTPKEKKAKTSKKKKRSKAKAEREASPADLPIDPNEPTYCLCNQVSYGEM 366
Query: 226 IGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDNEKTMDKSTEKTKKDR 277
IGCDN++CPIEWFHFSCV L +KPKGKWYCPKCRG+NEKTMDK+ EK+KK+R
Sbjct: 367 IGCDNDECPIEWFHFSCVGLNHKPKGKWYCPKCRGENEKTMDKALEKSKKER 418
>gi|38201665 inhibitor of growth family, member 1 isoform B [Homo
sapiens]
Length = 210
Score = 256 bits (655), Expect = 1e-68
Identities = 124/202 (61%), Positives = 154/202 (76%), Gaps = 10/202 (4%)
Query: 86 LQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAE-SERASDKAKMDSSQ 144
+QRALI SQELGDEKIQIV+QM+ELVENR RQ++ H + F+ E + A + K + +
Sbjct: 5 VQRALIRSQELGDEKIQIVSQMVELVENRTRQVDSHVELFEAQQELGDTAGNSGKAGADR 64
Query: 145 PER---------SSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAK 195
P+ +S+R RRQR +E+R+ + +D PKEKK+K++KKKKRSKAK
Sbjct: 65 PKGEAAAQADKPNSKRSRRQRNNENRENASSNHDHDDGASGTPKEKKAKTSKKKKRSKAK 124
Query: 196 QEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYC 255
EREASP + IDPNEPTYCLCNQVSYGEMIGCDN++CPIEWFHFSCV L +KPKGKWYC
Sbjct: 125 AEREASPADLPIDPNEPTYCLCNQVSYGEMIGCDNDECPIEWFHFSCVGLNHKPKGKWYC 184
Query: 256 PKCRGDNEKTMDKSTEKTKKDR 277
PKCRG+NEKTMDK+ EK+KK+R
Sbjct: 185 PKCRGENEKTMDKALEKSKKER 206
>gi|38201670 inhibitor of growth family, member 4 isoform 1 [Homo
sapiens]
Length = 248
Score = 172 bits (436), Expect = 3e-43
Identities = 89/252 (35%), Positives = 141/252 (55%), Gaps = 24/252 (9%)
Query: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKED---DLNQKKRLQ 83
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y +K L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 84 QLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143
+ +Q A +E GD+K+Q+ Q E+V+ R+++ D A E + +++SS
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT------DLARFEADLKEKQIESS 119
Query: 144 QPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 203
+ SS + ++ RT + + + ++ D++ PK + KK K + E V
Sbjct: 120 DYDSSSSKGKKSRTQKEKKAARARSKGKNSDEEAPKTAQ----KKLKLVRTSPEYGMPSV 175
Query: 204 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 252
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 176 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 235
Query: 253 WYCPKCRGDNEK 264
W+CP+C + +K
Sbjct: 236 WFCPRCSQERKK 247
>gi|18644730 inhibitor of growth family, member 5 [Homo sapiens]
Length = 240
Score = 172 bits (435), Expect = 4e-43
Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 11/241 (4%)
Query: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKY-KKEDDLNQKKRLQQL 85
Y++ YL+ +E+LP ++QRN ++RELD + ++ EID + +Y L+ +R+++L
Sbjct: 6 YLEHYLDSIENLPCELQRNFQLMRELDQRTEDKKAEIDILAAEYISTVKTLSPDQRVERL 65
Query: 86 --LQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143
+Q A +E D+K+Q+ Q E+V+ R+++ F+ A K KM+ S
Sbjct: 66 QKIQNAYSKCKEYSDDKVQLAMQTYEMVDKHIRRLDADLARFE-------ADLKDKMEGS 118
Query: 144 QPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 203
E S R ++ + G ++ PK+KK K + + + +
Sbjct: 119 DFESSGGRGLKKGRGQKEKRGSRGRGRRTSEEDTPKKKKHKGGSEFTDT-ILSVHPSDVL 177
Query: 204 EFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDNE 263
+ +DPNEPTYCLC+QVSYGEMIGCDN CPIEWFHF+CV LT KPKGKW+CP+C +
Sbjct: 178 DMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQEKR 237
Query: 264 K 264
K
Sbjct: 238 K 238
>gi|189083821 inhibitor of growth family, member 4 isoform 9 [Homo
sapiens]
Length = 249
Score = 169 bits (427), Expect = 3e-42
Identities = 89/252 (35%), Positives = 141/252 (55%), Gaps = 23/252 (9%)
Query: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKED---DLNQKKRLQ 83
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y +K L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 84 QLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143
+ +Q A +E GD+K+Q+ Q E+V+ R+++ F+ + E+ + + DSS
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLK-EKQIESSDYDSS 124
Query: 144 QPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 203
SS+ ++ RT + + + ++ D++ PK + KK K + E V
Sbjct: 125 ----SSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQ----KKLKLVRTSPEYGMPSV 176
Query: 204 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 252
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 177 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 236
Query: 253 WYCPKCRGDNEK 264
W+CP+C + +K
Sbjct: 237 WFCPRCSQERKK 248
>gi|189083828 inhibitor of growth family, member 4 isoform 4 [Homo
sapiens]
Length = 245
Score = 166 bits (419), Expect = 3e-41
Identities = 89/252 (35%), Positives = 140/252 (55%), Gaps = 27/252 (10%)
Query: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKED---DLNQKKRLQ 83
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y +K L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 84 QLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143
+ +Q A +E GD+K+Q+ Q E+V+ R+++ D A E + +++SS
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT------DLARFEADLKEKQIESS 119
Query: 144 QPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 203
+ SS + R Q+ ++ + ++ D++ PK + KK K + E V
Sbjct: 120 DYDSSSSKGRTQKEKKA---ARARSKGKNSDEEAPKTAQ----KKLKLVRTSPEYGMPSV 172
Query: 204 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 252
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 173 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 232
Query: 253 WYCPKCRGDNEK 264
W+CP+C + +K
Sbjct: 233 WFCPRCSQERKK 244
>gi|189083826 inhibitor of growth family, member 4 isoform 3 [Homo
sapiens]
Length = 246
Score = 166 bits (419), Expect = 3e-41
Identities = 89/252 (35%), Positives = 139/252 (55%), Gaps = 26/252 (10%)
Query: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKYKKED---DLNQKKRLQ 83
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y +K L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 84 QLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143
+ +Q A +E GD+K+Q+ Q E+V+ R+++ D A E + +++SS
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDT------DLARFEADLKEKQIESS 119
Query: 144 QPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPV 203
+ SS + RT + + + ++ D++ PK + KK K + E V
Sbjct: 120 DYDSSSSK--EGRTQKEKKAARARSKGKNSDEEAPKTAQ----KKLKLVRTSPEYGMPSV 173
Query: 204 EFA-----------IDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGK 252
F +DPNEPTYCLC+QVSYGEMIGCDN C IEWFHF+CV LT KP+GK
Sbjct: 174 TFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRGK 233
Query: 253 WYCPKCRGDNEK 264
W+CP+C + +K
Sbjct: 234 WFCPRCSQERKK 245
>gi|189083830 inhibitor of growth family, member 4 isoform 5 [Homo
sapiens]
Length = 225
Score = 140 bits (352), Expect = 2e-33
Identities = 80/224 (35%), Positives = 120/224 (53%), Gaps = 24/224 (10%)
Query: 56 YQETLK-EIDDVYEKYKKED---DLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELV 111
Y + LK EID + +Y +K L + +Q A +E GD+K+Q+ Q E+V
Sbjct: 10 YLDNLKAEIDKLATEYMSSARSLSSEEKLALLKQIQEAYGKCKEFGDDKVQLAMQTYEMV 69
Query: 112 ENRARQMELHSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMANGIE 171
+ R+++ F+ + E+ + + DSS SS+ ++ RT + + + +
Sbjct: 70 DKHIRRLDTDLARFEADLK-EKQIESSDYDSS----SSKGKKKGRTQKEKKAARARSKGK 124
Query: 172 DCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFA-----------IDPNEPTYCLCNQV 220
+ D++ PK + KK K + E V F +DPNEPTYCLC+QV
Sbjct: 125 NSDEEAPKTAQ----KKLKLVRTSPEYGMPSVTFGSVHPSDVLDMPVDPNEPTYCLCHQV 180
Query: 221 SYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDNEK 264
SYGEMIGCDN C IEWFHF+CV LT KP+GKW+CP+C + +K
Sbjct: 181 SYGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQERKK 224
>gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo
sapiens]
Length = 418
Score = 112 bits (279), Expect = 5e-25
Identities = 42/58 (72%), Positives = 49/58 (84%)
Query: 201 SPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKC 258
S V++ DPNEP YC+CNQVSYGEM+GCDN+ CPIEWFH+ CV LT PKGKWYCP+C
Sbjct: 349 SQVDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQC 406
Score = 52.8 bits (125), Expect = 3e-07
Identities = 26/111 (23%), Positives = 60/111 (54%), Gaps = 3/111 (2%)
Query: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKY---KKEDDLNQKKRLQ 83
Y++DYLE +E LP D++ + +RE+D + Q + +++ ++ K++ ++
Sbjct: 3 YLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQM 62
Query: 84 QLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERA 134
+++ + E DEK+Q+ Q+ +LV+ R+++ F+ E++ A
Sbjct: 63 ASIKKDYYKALEDADEKVQLANQIYDLVDRHLRKLDQELAKFKMELEADNA 113
>gi|189083832 inhibitor of growth family, member 4 isoform 6 [Homo
sapiens]
Length = 179
Score = 72.8 bits (177), Expect = 3e-13
Identities = 42/161 (26%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
Query: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKY---KKEDDLNQKKRLQ 83
Y++ YL+ +E+LP ++QRN ++R+LD + ++ EID + +Y + +K L
Sbjct: 6 YLEHYLDSIENLPFELQRNFQLMRDLDQRTEDLKAEIDKLATEYMSSARSLSSEEKLALL 65
Query: 84 QLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSS 143
+ +Q A +E GD+K+Q+ Q E+V+ R+++ F+ + E+ + + DSS
Sbjct: 66 KQIQEAYGKCKEFGDDKVQLAMQTYEMVDKHIRRLDTDLARFEADLK-EKQIESSDYDSS 124
Query: 144 QPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSK 184
SS+ ++ RT + + + ++ D++ PK + K
Sbjct: 125 ----SSKGKKKGRTQKEKKAARARSKGKNSDEEAPKTAQKK 161
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 51.6 bits (122), Expect = 8e-07
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 46/182 (25%)
Query: 91 INSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSSQPERSSR 150
++ Q L +E+I+ +++E ++ R +DP +ER + K K S P SS
Sbjct: 1 MHPQSLAEEEIKTEQEVVEGMDISTRS--------KDPGSAERTAQKRKFPS--PPHSSN 50
Query: 151 RPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDP- 209
Q TS S P +KK K +K + E P + P
Sbjct: 51 GHSPQDTSTS-----------------PIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPL 93
Query: 210 -NEPT-----------YC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCP 256
+P YC +C++ G+++ C E CP +H C+ LT +P+G W+CP
Sbjct: 94 TTDPVDVVPQDGRNDFYCWVCHRE--GQVLCC--ELCP-RVYHAKCLRLTSEPEGDWFCP 148
Query: 257 KC 258
+C
Sbjct: 149 EC 150
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 51.6 bits (122), Expect = 8e-07
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 46/182 (25%)
Query: 91 INSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSSQPERSSR 150
++ Q L +E+I+ +++E ++ R +DP +ER + K K S P SS
Sbjct: 1 MHPQSLAEEEIKTEQEVVEGMDISTRS--------KDPGSAERTAQKRKFPS--PPHSSN 50
Query: 151 RPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDP- 209
Q TS S P +KK K +K + E P + P
Sbjct: 51 GHSPQDTSTS-----------------PIKKKKKPGLLNSNNKEQSELRHGPFYYMKQPL 93
Query: 210 -NEPT-----------YC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCP 256
+P YC +C++ G+++ C E CP +H C+ LT +P+G W+CP
Sbjct: 94 TTDPVDVVPQDGRNDFYCWVCHRE--GQVLCC--ELCP-RVYHAKCLRLTSEPEGDWFCP 148
Query: 257 KC 258
+C
Sbjct: 149 EC 150
>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
Length = 1437
Score = 50.8 bits (120), Expect = 1e-06
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 161 RDLCHMANGIEDCDD----QPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCL 216
R CH G ++C +P S + +K K +K KQ+R E P +
Sbjct: 1270 RTECHC--GADNCSGFLGVRPKSACASTNEEKAKNAKLKQKRRKIKTE----PKQMHEDY 1323
Query: 217 CNQVSYG-EMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCP 256
C Q G E++ CD + CP + +H C++LT P GKW CP
Sbjct: 1324 CFQCGDGGELVMCDKKDCP-KAYHLLCLNLTQPPYGKWECP 1363
Score = 37.0 bits (84), Expect = 0.019
Identities = 38/189 (20%), Positives = 72/189 (38%), Gaps = 16/189 (8%)
Query: 71 KKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAE 130
KK+ + + R + ++ +++ E+++ V Q + E+ C + +
Sbjct: 574 KKQQRRSIRTRSESEKSTEVVPKKKIKKEQVETVPQATVKTGLQKGASEISDSC-KPLKK 632
Query: 131 SERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKK 190
RAS +M SS +S S+SR L + G D P + + +
Sbjct: 633 RSRASTDVEMTSSAYRDTS-------DSDSRGLSDLQVGFGKQVDSPSATADADVSDVQS 685
Query: 191 RSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPK 250
+ R + + T C + S +I C+ E C + FH C+ L P
Sbjct: 686 MDSSLSRRGTGMSK------KDTVCQICESSGDSLIPCEGECC--KHFHLECLGLASLPD 737
Query: 251 GKWYCPKCR 259
K+ C +C+
Sbjct: 738 SKFICMECK 746
>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
Length = 660
Score = 49.7 bits (117), Expect = 3e-06
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 210 NEPTYCLCNQVSYG-EMIGCDNEQCPIEWFHFSCVSLTYKPKG---KWYCPKCRGDNEKT 265
N P YC+C + MIGCDN EWFH C+ +T K +WYC +CR + K
Sbjct: 24 NAPIYCICRKPDINCFMIGCDNCN---EWFHGDCIRITEKMAKAIREWYCRECREKDPKL 80
Query: 266 MDKSTEKTKKDR 277
+ K ++R
Sbjct: 81 EIRYRHKKSRER 92
>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
Length = 656
Score = 49.7 bits (117), Expect = 3e-06
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 210 NEPTYCLCNQVSYG-EMIGCDNEQCPIEWFHFSCVSLTYKPKG---KWYCPKCRGDNEKT 265
N P YC+C + MIGCDN EWFH C+ +T K +WYC +CR + K
Sbjct: 24 NAPIYCICRKPDINCFMIGCDNCN---EWFHGDCIRITEKMAKAIREWYCRECREKDPKL 80
Query: 266 MDKSTEKTKKDR 277
+ K ++R
Sbjct: 81 EIRYRHKKSRER 92
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 48.9 bits (115), Expect = 5e-06
Identities = 44/169 (26%), Positives = 72/169 (42%), Gaps = 45/169 (26%)
Query: 91 INSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDSSQPERSSR 150
++ Q L +E+I+ +++E ++ R +DP +ER + K K S P SS
Sbjct: 1 MHPQSLAEEEIKTEQEVVEGMDISTRS--------KDPGSAERTAQKRKFPS--PPHSSN 50
Query: 151 RPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPN 210
Q TS S P +KK K +K + D
Sbjct: 51 GHSPQDTSTS-----------------PIKKKKKPGLLNSNNKEQ------------DGR 81
Query: 211 EPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKC 258
YC +C++ G+++ C E CP +H C+ LT +P+G W+CP+C
Sbjct: 82 NDFYCWVCHRE--GQVLCC--ELCP-RVYHAKCLRLTSEPEGDWFCPEC 125
>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
[Homo sapiens]
Length = 2427
Score = 47.0 bits (110), Expect = 2e-05
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 180 EKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFH 239
E+KSK KKK++ K + + E + E C G+++ C CP + +H
Sbjct: 1824 EEKSKKFKKKQQGKRRTQGEITK------EREDECFSCGDA--GQLVSCKKPGCP-KVYH 1874
Query: 240 FSCVSLTYKPKGKWYCP 256
C++LT +P GKW CP
Sbjct: 1875 ADCLNLTKRPAGKWECP 1891
Score = 37.0 bits (84), Expect = 0.019
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 223 GEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCR 259
GE++ C+ + C FH C+ LT P+GK+ C +CR
Sbjct: 1284 GELLLCEAQCCGA--FHLECLGLTEMPRGKFICNECR 1318
Score = 32.0 bits (71), Expect = 0.62
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 223 GEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCR 259
G ++ CD+ CP FH C+++ P+G WYC C+
Sbjct: 1448 GSLLCCDS--CPAA-FHRECLNIDI-PEGNWYCNDCK 1480
>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
[Homo sapiens]
Length = 2696
Score = 47.0 bits (110), Expect = 2e-05
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 180 EKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGEMIGCDNEQCPIEWFH 239
E+KSK KKK++ K + + E + E C G+++ C CP + +H
Sbjct: 2093 EEKSKKFKKKQQGKRRTQGEITK------EREDECFSCGDA--GQLVSCKKPGCP-KVYH 2143
Query: 240 FSCVSLTYKPKGKWYCP 256
C++LT +P GKW CP
Sbjct: 2144 ADCLNLTKRPAGKWECP 2160
Score = 37.0 bits (84), Expect = 0.019
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 223 GEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCR 259
GE++ C+ + C FH C+ LT P+GK+ C +CR
Sbjct: 1553 GELLLCEAQCCGA--FHLECLGLTEMPRGKFICNECR 1587
Score = 32.0 bits (71), Expect = 0.62
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 223 GEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCR 259
G ++ CD+ CP FH C+++ P+G WYC C+
Sbjct: 1717 GSLLCCDS--CPAA-FHRECLNIDI-PEGNWYCNDCK 1749
>gi|38201659 inhibitor of growth family, member 3 isoform 3 [Homo
sapiens]
Length = 92
Score = 44.7 bits (104), Expect = 9e-05
Identities = 21/87 (24%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 27 YVQDYLECVESLPHDMQRNVSVLRELDNKYQETLKEIDDVYEKY---KKEDDLNQKKRLQ 83
Y++DYLE +E LP D++ + +RE+D + Q + +++ ++ K++ ++
Sbjct: 3 YLEDYLEMIEQLPMDLRDRFTEMREMDLQVQNAMDQLEQRVSEFFMNAKKNKPEWREEQM 62
Query: 84 QLLQRALINSQELGDEKIQIVTQMLEL 110
+++ + E DEK+Q+ Q+ +L
Sbjct: 63 ASIKKDYYKALEDADEKVQLANQIYDL 89
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 44.7 bits (104), Expect = 9e-05
Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 48 VLRELDNKYQETLKEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQM 107
V+ + + E+ E D YE + K D ++K + + + ++ D ++ ++
Sbjct: 1771 VVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKG--EKEKKRDSSLRSRSKR 1828
Query: 108 LELVENRARQMELHSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMA 167
+ E+++R+ S+ + + + S K+K SQ SR RR+R+S SR
Sbjct: 1829 SKSSEHKSRKRTSESR-----SRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGR 1883
Query: 168 NGI-EDCDDQPPKEKKSKSAKKKKRSKAKQERE 199
+ ++ + PK + +K+KRS ++ R+
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 44.7 bits (104), Expect = 9e-05
Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 8/153 (5%)
Query: 48 VLRELDNKYQETLKEIDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKIQIVTQM 107
V+ + + E+ E D YE + K D ++K + + + ++ D ++ ++
Sbjct: 1771 VVSSMPERASESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKG--EKEKKRDSSLRSRSKR 1828
Query: 108 LELVENRARQMELHSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMA 167
+ E+++R+ S+ + + + S K+K SQ SR RR+R+S SR
Sbjct: 1829 SKSSEHKSRKRTSESR-----SRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGR 1883
Query: 168 NGI-EDCDDQPPKEKKSKSAKKKKRSKAKQERE 199
+ ++ + PK + +K+KRS ++ R+
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
>gi|51599156 chromodomain helicase DNA binding protein 4 [Homo
sapiens]
Length = 1912
Score = 43.5 bits (101), Expect = 2e-04
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 17/117 (14%)
Query: 153 RRQRTSESRDLCHMANGIEDC--------DDQPPKEKKSKSAKKKKRSKAKQEREASPVE 204
+R+R+S D + + +D D + +S+ + + K K E E + V+
Sbjct: 304 KRKRSSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAVD 363
Query: 205 FAIDPNEPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKC 258
+ + YC +C Q GE+I CD CP +H C+ + P+GKW CP C
Sbjct: 364 -GYETDHQDYCEVCQQG--GEIILCDT--CP-RAYHMVCLDPDMEKAPEGKWSCPHC 414
Score = 32.7 bits (73), Expect = 0.36
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 223 GEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKC 258
GE++ CD CP +H C++ L P G+W CP+C
Sbjct: 459 GELLCCDT--CPSS-YHIHCLNPPLPEIPNGEWLCPRC 493
Score = 31.2 bits (69), Expect = 1.1
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 25/117 (21%)
Query: 121 HSQCFQDPAESERASDKAKMDSSQPERSSRRPR----RQRTSESRDLCH----------- 165
H + +DP E ++ K+ + + R P+ +++ E LC
Sbjct: 32 HPENEEDPEEDLSETETPKLKKKKKPKKPRDPKIPKSKRQKKERMLLCRQLGDSSGEGPE 91
Query: 166 ---------MANGIEDCDDQPPKEKKSK-SAKKKKRSKAKQEREASPVEFAIDPNEP 212
+ + E D P K+KK K KK+K+SK+K++ E + D EP
Sbjct: 92 FVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKKSKSKRKEEEEEEDDDDDSKEP 148
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 43.5 bits (101), Expect = 2e-04
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 180 EKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGE---MIGCDNEQCPIE 236
+K+ + +K SK+K+++ S + YC+C + Y E IGCD Q
Sbjct: 2692 QKRKREEEKDSSSKSKKKKMISTTSKETKKDTKLYCIC-KTPYDESKFYIGCDRCQ---N 2747
Query: 237 WFHFSCVSLTYKPK---GKWYCPKCRGDNEKTMDKSTEKTKKD 276
W+H CV + ++ CP+C+ E M T T+KD
Sbjct: 2748 WYHGRCVGILQSEAELIDEYVCPQCQ-STEDAMTVLTPLTEKD 2789
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 43.5 bits (101), Expect = 2e-04
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 180 EKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYCLCNQVSYGE---MIGCDNEQCPIE 236
+K+ + +K SK+K+++ S + YC+C + Y E IGCD Q
Sbjct: 2709 QKRKREEEKDSSSKSKKKKMISTTSKETKKDTKLYCIC-KTPYDESKFYIGCDRCQ---N 2764
Query: 237 WFHFSCVSLTYKPK---GKWYCPKCRGDNEKTMDKSTEKTKKD 276
W+H CV + ++ CP+C+ E M T T+KD
Sbjct: 2765 WYHGRCVGILQSEAELIDEYVCPQCQ-STEDAMTVLTPLTEKD 2806
>gi|153085395 histone deacetylase 4 [Homo sapiens]
Length = 1084
Score = 43.1 bits (100), Expect = 3e-04
Identities = 48/211 (22%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 4 QQQQQLYSSAALLTGERSRLLTCYVQDYLECVESLPHDMQRNVSVLRE-LDNKYQETLKE 62
Q QQ+L + +R L+ + + + + + ++ +E L K+Q+ L E
Sbjct: 70 QLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMKHQQELLE 129
Query: 63 IDDVYEKYKKEDDLNQKKRLQQLLQRALINSQELGDEKI----QIVTQMLELVENRARQM 118
E++++E +L ++ R Q+L Q + ++E G E ++ ++ E V N+ + +
Sbjct: 130 HQRKLERHRQEQELEKQHREQKLQQ---LKNKEKGKESAVASTEVKMKLQEFVLNKKKAL 186
Query: 119 ---ELHSQCFQDPAESERASDKAKMDSSQPERSSRRPRRQRTSESRDLCHMANGIEDCDD 175
L+ DP + + +D S P +S S H G+ D D
Sbjct: 187 AHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSG---------VSTSYNHPVLGMYDAKD 237
Query: 176 QPPKEKKSKSAKKKKRSKAKQ---EREASPV 203
P K + K RS+ KQ ER +SP+
Sbjct: 238 DFPLRKTASEPNLKLRSRLKQKVAERRSSPL 268
>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
[Homo sapiens]
Length = 2000
Score = 42.7 bits (99), Expect = 4e-04
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Query: 152 PRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNE 211
P + + H A+G D + K K+ + +KKK+ + +
Sbjct: 319 PEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDH 378
Query: 212 PTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGDNEKTMDK 268
YC +C Q GE+I CD CP +H C+ L P+GKW CP C + + K
Sbjct: 379 QDYCEVCQQG--GEIILCDT--CP-RAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAK 433
Query: 269 STEK 272
E+
Sbjct: 434 EEEE 437
Score = 33.1 bits (74), Expect = 0.28
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 177 PPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYC-LCNQVSYGEMIGCDNEQCPI 235
P EK+ + K+ + +E E + + YC +C GE++ CD I
Sbjct: 421 PHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDG--GELLCCD---ACI 475
Query: 236 EWFHFSCVS--LTYKPKGKWYCPKC 258
+H C++ L P G+W CP+C
Sbjct: 476 SSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 28.9 bits (63), Expect = 5.2
Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 12/135 (8%)
Query: 83 QQLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDS 142
QQ+L R I L +K+Q E + R EL D S RAS K
Sbjct: 1486 QQVLTR--IGVMSLVKKKVQ----EFEHINGRWSMPELMPDPSADSKRSSRASSPTKTSP 1539
Query: 143 SQPERS------SRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQ 196
+ PE S + +P SE + E+ ++Q K +K+ +K ++A
Sbjct: 1540 TTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEKPEKNSRIGEKMETEADA 1599
Query: 197 EREASPVEFAIDPNE 211
A + ++P +
Sbjct: 1600 PSPAPSLGERLEPRK 1614
>gi|52630322 chromodomain helicase DNA binding protein 3 isoform 2
[Homo sapiens]
Length = 1966
Score = 42.7 bits (99), Expect = 4e-04
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 8/124 (6%)
Query: 152 PRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNE 211
P + + H A+G D + K K+ + +KKK+ + +
Sbjct: 319 PEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAVAGEEEVDGYETDH 378
Query: 212 PTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGDNEKTMDK 268
YC +C Q GE+I CD CP +H C+ L P+GKW CP C + + K
Sbjct: 379 QDYCEVCQQG--GEIILCDT--CP-RAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAK 433
Query: 269 STEK 272
E+
Sbjct: 434 EEEE 437
Score = 33.1 bits (74), Expect = 0.28
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Query: 177 PPKEKKSKSAKKKKRSKAKQEREASPVEFAIDPNEPTYC-LCNQVSYGEMIGCDNEQCPI 235
P EK+ + K+ + +E E + + YC +C GE++ CD I
Sbjct: 421 PHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDG--GELLCCD---ACI 475
Query: 236 EWFHFSCVS--LTYKPKGKWYCPKC 258
+H C++ L P G+W CP+C
Sbjct: 476 SSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 28.9 bits (63), Expect = 5.2
Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 12/135 (8%)
Query: 83 QQLLQRALINSQELGDEKIQIVTQMLELVENRARQMELHSQCFQDPAESERASDKAKMDS 142
QQ+L R I L +K+Q E + R EL D S RAS K
Sbjct: 1486 QQVLTR--IGVMSLVKKKVQ----EFEHINGRWSMPELMPDPSADSKRSSRASSPTKTSP 1539
Query: 143 SQPERS------SRRPRRQRTSESRDLCHMANGIEDCDDQPPKEKKSKSAKKKKRSKAKQ 196
+ PE S + +P SE + E+ ++Q K +K+ +K ++A
Sbjct: 1540 TTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKEEAENQEEKPEKNSRIGEKMETEADA 1599
Query: 197 EREASPVEFAIDPNE 211
A + ++P +
Sbjct: 1600 PSPAPSLGERLEPRK 1614
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,783,068
Number of Sequences: 37866
Number of extensions: 493431
Number of successful extensions: 4477
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 471
Number of HSP's that attempted gapping in prelim test: 3418
Number of HSP's gapped (non-prelim): 1311
length of query: 280
length of database: 18,247,518
effective HSP length: 101
effective length of query: 179
effective length of database: 14,423,052
effective search space: 2581726308
effective search space used: 2581726308
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.