Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4503105
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503105 cystatin SA precursor [Homo sapiens]
(141 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503105 cystatin SA precursor [Homo sapiens] 291 2e-79
gi|4503109 cystatin S precursor [Homo sapiens] 251 2e-67
gi|19882251 cystatin SN precursor [Homo sapiens] 247 2e-66
gi|19882256 cystatin D precursor [Homo sapiens] 167 2e-42
gi|4503107 cystatin C precursor [Homo sapiens] 162 1e-40
gi|4885163 cystatin 8 precursor [Homo sapiens] 80 7e-16
gi|4503113 cystatin M precursor [Homo sapiens] 70 6e-13
gi|19882249 cystatin 11 isoform 1 precursor [Homo sapiens] 69 1e-12
gi|19882259 cystatin-like 1 precursor [Homo sapiens] 67 4e-12
gi|20302139 cystatin F [Homo sapiens] 66 8e-12
gi|18104940 cystatin 9-like precursor [Homo sapiens] 65 2e-11
gi|4504893 kininogen 1 isoform 2 [Homo sapiens] 52 2e-07
gi|156231037 kininogen 1 isoform 1 [Homo sapiens] 52 2e-07
gi|226529477 cystatin 9 precursor [Homo sapiens] 47 7e-06
gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens] 46 9e-06
gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo ... 44 4e-05
gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo ... 43 8e-05
gi|18644732 cystatin 11 isoform 2 precursor [Homo sapiens] 39 0.001
gi|58331240 fetuin B [Homo sapiens] 37 0.007
gi|4885165 cystatin A [Homo sapiens] 30 0.86
gi|109826564 neurofibromin isoform 1 [Homo sapiens] 28 2.5
gi|4557793 neurofibromin isoform 2 [Homo sapiens] 28 2.5
gi|225637475 solute carrier organic anion transporter family, me... 26 9.5
gi|225637473 solute carrier organic anion transporter family, me... 26 9.5
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 26 9.5
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 26 9.5
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 26 9.5
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 26 9.5
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 26 9.5
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 26 9.5
>gi|4503105 cystatin SA precursor [Homo sapiens]
Length = 141
Score = 291 bits (744), Expect = 2e-79
Identities = 141/141 (100%), Positives = 141/141 (100%)
Query: 1 MAWPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATE 60
MAWPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATE
Sbjct: 1 MAWPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATE 60
Query: 61 DEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF 120
DEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF
Sbjct: 61 DEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF 120
Query: 121 QIYEVPWEDRMSLVNSRCQEA 141
QIYEVPWEDRMSLVNSRCQEA
Sbjct: 121 QIYEVPWEDRMSLVNSRCQEA 141
>gi|4503109 cystatin S precursor [Homo sapiens]
Length = 141
Score = 251 bits (640), Expect = 2e-67
Identities = 124/141 (87%), Positives = 130/141 (92%)
Query: 1 MAWPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATE 60
MA PLCTLLLL+AT A ALA S +EE+RII GGIYDADLNDE VQRALHF ISEYNKATE
Sbjct: 1 MARPLCTLLLLMATLAGALASSSKEENRIIPGGIYDADLNDEWVQRALHFAISEYNKATE 60
Query: 61 DEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF 120
DEYYRR L+VLRAREQ GGVNYFFD+EVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF
Sbjct: 61 DEYYRRPLQVLRAREQTFGGVNYFFDVEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF 120
Query: 121 QIYEVPWEDRMSLVNSRCQEA 141
+IYEVPWEDRMSLVNSRCQEA
Sbjct: 121 EIYEVPWEDRMSLVNSRCQEA 141
>gi|19882251 cystatin SN precursor [Homo sapiens]
Length = 141
Score = 247 bits (631), Expect = 2e-66
Identities = 121/141 (85%), Positives = 130/141 (92%)
Query: 1 MAWPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATE 60
MA L TLLLLLAT AVALAWSP+EEDRII GGIY+ADLNDE VQRALHF ISEYNKAT+
Sbjct: 1 MAQYLSTLLLLLATLAVALAWSPKEEDRIIPGGIYNADLNDEWVQRALHFAISEYNKATK 60
Query: 61 DEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF 120
D+YYRR LRVLRAR+Q VGGVNYFFD+EVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF
Sbjct: 61 DDYYRRPLRVLRARQQTVGGVNYFFDVEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSF 120
Query: 121 QIYEVPWEDRMSLVNSRCQEA 141
+IYEVPWE+R SLV SRCQE+
Sbjct: 121 EIYEVPWENRRSLVKSRCQES 141
>gi|19882256 cystatin D precursor [Homo sapiens]
Length = 142
Score = 167 bits (424), Expect = 2e-42
Identities = 79/141 (56%), Positives = 107/141 (75%), Gaps = 1/141 (0%)
Query: 1 MAWPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKA-T 59
M WP+ T LLLL VA+A S + R + GGI+ DLND+ VQ AL F ISEYNK
Sbjct: 1 MMWPMHTPLLLLTALMVAVAGSASAQSRTLAGGIHATDLNDKSVQCALDFAISEYNKVIN 60
Query: 60 EDEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCS 119
+DEYY R L+V+ A +QIVGGVNY+F+++ GRT CTKSQPNLD C F++QP+L++++ CS
Sbjct: 61 KDEYYSRPLQVMAAYQQIVGGVNYYFNVKFGRTTCTKSQPNLDNCPFNDQPKLKEEEFCS 120
Query: 120 FQIYEVPWEDRMSLVNSRCQE 140
FQI EVPWED++S++N +C++
Sbjct: 121 FQINEVPWEDKISILNYKCRK 141
>gi|4503107 cystatin C precursor [Homo sapiens]
Length = 146
Score = 162 bits (409), Expect = 1e-40
Identities = 83/147 (56%), Positives = 104/147 (70%), Gaps = 7/147 (4%)
Query: 1 MAWPLCTLLLLLATQAVALAWSPQ------EEDRIIEGGIYDADLNDERVQRALHFVISE 54
MA PL LLLLA AVALA SP + R++ GG DA + +E V+RAL F + E
Sbjct: 1 MAGPLRAPLLLLAILAVALAVSPAAGSSPGKPPRLV-GGPMDASVEEEGVRRALDFAVGE 59
Query: 55 YNKATEDEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQK 114
YNKA+ D Y+ R L+V+RAR+QIV GVNYF D+E+GRT CTK+QPNLD C FH+QP L++
Sbjct: 60 YNKASNDMYHSRALQVVRARKQIVAGVNYFLDVELGRTTCTKTQPNLDNCPFHDQPHLKR 119
Query: 115 KQLCSFQIYEVPWEDRMSLVNSRCQEA 141
K CSFQIY VPW+ M+L S CQ+A
Sbjct: 120 KAFCSFQIYAVPWQGTMTLSKSTCQDA 146
>gi|4885163 cystatin 8 precursor [Homo sapiens]
Length = 142
Score = 79.7 bits (195), Expect = 7e-16
Identities = 36/135 (26%), Positives = 74/135 (54%)
Query: 7 TLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDEYYRR 66
+L+LL A+ P++ + + + + ++ V++ L F + EYNK +ED+Y
Sbjct: 8 SLILLTIPLALVARKDPKKNETGVLRKLKPVNASNANVKQCLWFAMQEYNKESEDKYVFL 67
Query: 67 LLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSFQIYEVP 126
+++ L+A+ Q+ + Y D+E+ R+ C K + CA E +L++K CSF + +P
Sbjct: 68 VVKTLQAQLQVTNLLEYLIDVEIARSDCRKPLSTNEICAIQENSKLKRKLSCSFLVGALP 127
Query: 127 WEDRMSLVNSRCQEA 141
W +++ +C++A
Sbjct: 128 WNGEFTVMEKKCEDA 142
>gi|4503113 cystatin M precursor [Homo sapiens]
Length = 149
Score = 70.1 bits (170), Expect = 6e-13
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 12/141 (8%)
Query: 8 LLLLLATQAVALAWSPQE-----EDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDE 62
L L LA A L P++ ++R++ G + D +D +VQ+A ++ YN +
Sbjct: 8 LALGLALVAFCLLALPRDARARPQERMV-GELRDLSPDDPQVQKAAQAAVASYNMGSNSI 66
Query: 63 YYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQ-----PNLDTCAFHEQPELQKKQL 117
YY R +++A+ Q+V G+ YF +E+G T C K++ +L TC + Q+K
Sbjct: 67 YYFRDTHIIKAQSQLVAGIKYFLTMEMGSTDCRKTRVTGDHVDLTTCPLAAGAQ-QEKLR 125
Query: 118 CSFQIYEVPWEDRMSLVNSRC 138
C F++ VPW++ L+ C
Sbjct: 126 CDFEVLVVPWQNSSQLLKHNC 146
>gi|19882249 cystatin 11 isoform 1 precursor [Homo sapiens]
Length = 138
Score = 69.3 bits (168), Expect = 1e-12
Identities = 35/136 (25%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 3 WPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDE 62
W LLL + +AL + +++ + +++ + + +L ++ +YNK ++D+
Sbjct: 6 WQALQLLLAILLTLMALPYQARKKTFL---SVHEVMAVENYAKDSLQWITDQYNKESDDK 62
Query: 63 YYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSFQI 122
Y+ R+ RVL+ + Q+ + Y ++E+ T C K P C E+ EL K+ C F +
Sbjct: 63 YHFRIFRVLKVQRQVTDHLEYHLNVEMQWTTCQK--PETTNCVPQER-ELHKQVNCFFSV 119
Query: 123 YEVPWEDRMSLVNSRC 138
+ VPW ++ ++N C
Sbjct: 120 FAVPWFEQYKILNKSC 135
>gi|19882259 cystatin-like 1 precursor [Homo sapiens]
Length = 145
Score = 67.4 bits (163), Expect = 4e-12
Identities = 31/103 (30%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 39 LNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQ 98
++ + + L+F I YN A+ D Y R+ R++R++ Q+ GV Y +++G T C ++
Sbjct: 36 MSKKNMNSTLNFFIQSYNNASNDTYLYRVQRLIRSQMQLTTGVEYIVTVKIGWTKCKRND 95
Query: 99 PNLDTCAFHEQPELQKKQLCSFQIYEVPWEDRMSLVNSRCQEA 141
+ +C + +L+K +C IY +PW + L N+ C EA
Sbjct: 96 TSNSSCPL-QSKKLRKSLICESLIYTMPWINYFQLWNNSCLEA 137
>gi|20302139 cystatin F [Homo sapiens]
Length = 167
Score = 66.2 bits (160), Expect = 8e-12
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 40 NDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQP 99
ND V +A + + ++N T D + + R+ RA QIV G+ Y ++E+GRT C K+Q
Sbjct: 67 NDPGVLQAARYSVEKFNNCTNDMFLFKESRITRALVQIVKGLKYMLEVEIGRTTCKKNQH 126
Query: 100 -NLDTCAFHEQPELQKKQLCSFQIYEVPWEDRMSLVNSRC 138
LD C F L++ C +++ VPW + RC
Sbjct: 127 LRLDDCDFQTNHTLKQTLSCYSEVWVVPWLQHFEVPVLRC 166
>gi|18104940 cystatin 9-like precursor [Homo sapiens]
Length = 147
Score = 65.1 bits (157), Expect = 2e-11
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 1 MAWPLCTLLLLLATQAVAL-AWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKAT 59
++W L LLLLL +Q + + AW E+ E + L + F + +N+ +
Sbjct: 10 LSWAL--LLLLLGSQILLIYAWHFHEQRDCDEHNVMARYL-----PATVEFAVHTFNQQS 62
Query: 60 EDEYYRRLLRVLRA-REQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLC 118
+D Y RL +L + +EQ+ + ++ +GRT C K + ++D C F E EL C
Sbjct: 63 KDYYAYRLGHILNSWKEQVESKTVFSMELLLGRTRCGKFEDDIDNCHFQESTELNNTFTC 122
Query: 119 SFQIYEVPWEDRMSLVNSRCQE 140
F I PW + SL+N C E
Sbjct: 123 FFTISTRPWMTQFSLLNKTCLE 144
>gi|4504893 kininogen 1 isoform 2 [Homo sapiens]
Length = 427
Score = 52.0 bits (123), Expect = 2e-07
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 24 QEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNY 83
Q +I G D N ++ L I++ N +Y ++ V +AR Q+V G Y
Sbjct: 258 QPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKY 317
Query: 84 FFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSFQIYEVPWEDRM 131
F D T C+K + N + E +L + C+ ++Y VPWE ++
Sbjct: 318 FIDFVARETTCSK-ESNEELTESCETKKLGQSLDCNAEVYVVPWEKKI 364
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 32 GGIYDADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNYFFDIEVGR 91
G ++ ++ L I +N T+ L V RA+ Q+V G+N+ + +
Sbjct: 144 GCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQRQVVAGLNFRITYSIVQ 203
Query: 92 TICTK 96
T C+K
Sbjct: 204 TNCSK 208
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 5 LCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDEYY 64
L T+L L + ++L Q E+ D ND+ + +A+ + +YN +
Sbjct: 3 LITILFLCSRLLLSLTQESQSEE---------IDCNDKDLFKAVDAALKKYNSQNQSNNQ 53
Query: 65 RRLLRVLRAREQIVGGVNYFFDIEVGRTIC 94
L R+ A + + Y F E+ C
Sbjct: 54 FVLYRITEATKTVGSDTFYSFKYEIKEGDC 83
>gi|156231037 kininogen 1 isoform 1 [Homo sapiens]
Length = 644
Score = 52.0 bits (123), Expect = 2e-07
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 24 QEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNY 83
Q +I G D N ++ L I++ N +Y ++ V +AR Q+V G Y
Sbjct: 258 QPPTKICVGCPRDIPTNSPELEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKY 317
Query: 84 FFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSFQIYEVPWEDRM 131
F D T C+K + N + E +L + C+ ++Y VPWE ++
Sbjct: 318 FIDFVARETTCSK-ESNEELTESCETKKLGQSLDCNAEVYVVPWEKKI 364
Score = 29.3 bits (64), Expect = 1.1
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 32 GGIYDADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNYFFDIEVGR 91
G ++ ++ L I +N T+ L V RA+ Q+V G+N+ + +
Sbjct: 144 GCVHPISTQSPDLEPILRHGIQYFNNNTQHSSLFMLNEVKRAQRQVVAGLNFRITYSIVQ 203
Query: 92 TICTK 96
T C+K
Sbjct: 204 TNCSK 208
Score = 28.5 bits (62), Expect = 1.9
Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 5 LCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDEYY 64
L T+L L + ++L Q E+ D ND+ + +A+ + +YN +
Sbjct: 3 LITILFLCSRLLLSLTQESQSEE---------IDCNDKDLFKAVDAALKKYNSQNQSNNQ 53
Query: 65 RRLLRVLRAREQIVGGVNYFFDIEVGRTIC 94
L R+ A + + Y F E+ C
Sbjct: 54 FVLYRITEATKTVGSDTFYSFKYEIKEGDC 83
>gi|226529477 cystatin 9 precursor [Homo sapiens]
Length = 159
Score = 46.6 bits (109), Expect = 7e-06
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Query: 1 MAWPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATE 60
M W L +LLL+ V AW +EE G + + D + F ++ +N ++
Sbjct: 10 MPWAL-SLLLMGFQLLVTYAWCSEEEM-----GGNNKIVQDPMFLATVEFALNTFNVQSK 63
Query: 61 DEYYRRLLRVLRA-REQIV-----GGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPEL 112
+E+ RLLRVL + RE + G + + ++++ +T+C K + ++D C F E EL
Sbjct: 64 EEHAYRLLRVLSSWREDSMDRKWRGKMVFSMNLQLRQTVCRKFEDDIDNCPFQESLEL 121
>gi|169214772 PREDICTED: similar to hCG1783157 [Homo sapiens]
Length = 538
Score = 46.2 bits (108), Expect = 9e-06
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 32/123 (26%)
Query: 25 EEDRIIEG----GIYDADL----NDERVQR------ALHFVISEYNKATEDEYYRRLLRV 70
E+ ++EG G Y A+ + +R++R ++ F ++++N+ +EY RLL V
Sbjct: 360 EDSHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEV 419
Query: 71 LRAREQIVG------------------GVNYFFDIEVGRTICTKSQPNLDTCAFHEQPEL 112
RA++++ G GV D+E+G TIC K ++D C E
Sbjct: 420 QRAQQKVSGSHFVHSQNSLHRLNSSKPGVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAE 479
Query: 113 QKK 115
+KK
Sbjct: 480 KKK 482
>gi|239746455 PREDICTED: hypothetical protein XP_002344215 [Homo
sapiens]
Length = 537
Score = 43.9 bits (102), Expect = 4e-05
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 32/123 (26%)
Query: 25 EEDRIIEG----GIYDADL----NDERVQR------ALHFVISEYNKATEDEYYRRLLRV 70
E+ ++EG G Y A+ + +R++R ++ F ++++N+ +EY RLL V
Sbjct: 359 EDSHVVEGAPAHGTYCAEHPHLDHSKRIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEV 418
Query: 71 LRAREQIVGG------------------VNYFFDIEVGRTICTKSQPNLDTCAFHEQPEL 112
RA++++ G V D+E+G TIC K ++D C E
Sbjct: 419 QRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAE 478
Query: 113 QKK 115
+KK
Sbjct: 479 KKK 481
>gi|239751973 PREDICTED: hypothetical protein XP_002348052 [Homo
sapiens]
Length = 537
Score = 43.1 bits (100), Expect = 8e-05
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 32/123 (26%)
Query: 25 EEDRIIEG----GIYDAD---LNDERVQR-------ALHFVISEYNKATEDEYYRRLLRV 70
E+ ++EG G Y A+ L+ ++ R ++ F ++++N+ +EY RLL V
Sbjct: 359 EDSHVVEGAPAHGTYCAEHPHLDHSKIIRRHQYFVASMEFAVAQFNEDNMEEYTHRLLEV 418
Query: 71 LRAREQIVGG------------------VNYFFDIEVGRTICTKSQPNLDTCAFHEQPEL 112
RA++++ G V D+E+G TIC K ++D C E
Sbjct: 419 QRAQQKVSGSHFVHSQNSLHRLNSSKPVVMAAGDLEMGLTICKKYDEDIDNCPLQEGSAE 478
Query: 113 QKK 115
+KK
Sbjct: 479 KKK 481
>gi|18644732 cystatin 11 isoform 2 precursor [Homo sapiens]
Length = 103
Score = 39.3 bits (90), Expect = 0.001
Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 41/136 (30%)
Query: 3 WPLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDE 62
W LLL + +AL + +++ + +++ + + +L ++ +YNK ++D+
Sbjct: 6 WQALQLLLAILLTLMALPYQARKKTFL---SVHEVMAVENYAKDSLQWITDQYNKESDDK 62
Query: 63 YYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKSQPNLDTCAFHEQPELQKKQLCSFQI 122
Y+ R+ RVL+ + Q V C F +
Sbjct: 63 YHFRIFRVLKVQRQQVN--------------------------------------CFFSV 84
Query: 123 YEVPWEDRMSLVNSRC 138
+ VPW ++ ++N C
Sbjct: 85 FAVPWFEQYKILNKSC 100
>gi|58331240 fetuin B [Homo sapiens]
Length = 382
Score = 36.6 bits (83), Expect = 0.007
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 38 DLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNYFFDIEVGRTICTKS 97
D ++ +V A +++YN + Y L +V RA Q V G +YF + + + CTKS
Sbjct: 161 DSSNHQVLEAATESLAKYNNENTSKQYS-LFKVTRASSQWVVGPSYFVEYLIKESPCTKS 219
Query: 98 QPNLDTCAFHEQPELQKKQLCSFQIYEVPWEDRMSL 133
Q + +C+ + LC + WE +S+
Sbjct: 220 QAS--SCSLQSSDSV-PVGLCKGSLTRTHWEKFVSV 252
Score = 30.8 bits (68), Expect = 0.39
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 4 PLCTLLLLLATQAVALAWSPQEEDRIIEGGIYDADLNDERVQRALHFVISEYNKATEDEY 63
PL +L+L A++ ++ G D+D V F + + NK +D Y
Sbjct: 6 PLALCILVLCCGAMSPPQLALNPSALLSRGCNDSD-----VLAVAGFALRDINKDRKDGY 60
Query: 64 YRRLLRVLRAREQIVGGVN--YFFDIEVGRTIC 94
RL RV A+E GG+ ++ ++V T C
Sbjct: 61 VLRLNRVNDAQEYRRGGLGSLFYLTLDVLETDC 93
>gi|4885165 cystatin A [Homo sapiens]
Length = 98
Score = 29.6 bits (65), Expect = 0.86
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 29 IIEGGIYDADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIVGGVNYFFDIE 88
+I GG+ +A +Q + V + + T + Y + L ++ + Q+V G NY+ +
Sbjct: 1 MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGK--LEAVQYKTQVVAGTNYYIKVR 58
Query: 89 VG 90
G
Sbjct: 59 AG 60
>gi|109826564 neurofibromin isoform 1 [Homo sapiens]
Length = 2839
Score = 28.1 bits (61), Expect = 2.5
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 39 LNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIV-----GGVNYFFDIEVGRTI 93
L D ++Q L V++ K T DE+ +R+L A +V V+ D ++ +
Sbjct: 2610 LTDPKIQALLLTVLATLVKYTTDEFDQRILYEYLAEASVVFPKVFPVVHNLLDSKINTLL 2669
Query: 94 CTKSQPNL--------DTCAFHEQ--PELQKKQLCSF 120
PNL + +HE+ P+ Q L SF
Sbjct: 2670 SLCQDPNLLNPIHGIVQSVVYHEESPPQYQTSYLQSF 2706
>gi|4557793 neurofibromin isoform 2 [Homo sapiens]
Length = 2818
Score = 28.1 bits (61), Expect = 2.5
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 15/97 (15%)
Query: 39 LNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQIV-----GGVNYFFDIEVGRTI 93
L D ++Q L V++ K T DE+ +R+L A +V V+ D ++ +
Sbjct: 2589 LTDPKIQALLLTVLATLVKYTTDEFDQRILYEYLAEASVVFPKVFPVVHNLLDSKINTLL 2648
Query: 94 CTKSQPNL--------DTCAFHEQ--PELQKKQLCSF 120
PNL + +HE+ P+ Q L SF
Sbjct: 2649 SLCQDPNLLNPIHGIVQSVVYHEESPPQYQTSYLQSF 2685
>gi|225637475 solute carrier organic anion transporter family,
member 5A1 isoform 3 [Homo sapiens]
Length = 793
Score = 26.2 bits (56), Expect = 9.5
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 95 TKSQPNLDTCA-FHEQPELQKKQLCSFQIYEVPWEDRMS 132
T+S P T FHE+ LQK C+ Q Y P+ + +S
Sbjct: 737 TRSCPAFSTQGEFHEETGLQKGIQCAAQTYPGPFPEAIS 775
>gi|225637473 solute carrier organic anion transporter family,
member 5A1 isoform 1 [Homo sapiens]
Length = 848
Score = 26.2 bits (56), Expect = 9.5
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 95 TKSQPNLDTCA-FHEQPELQKKQLCSFQIYEVPWEDRMS 132
T+S P T FHE+ LQK C+ Q Y P+ + +S
Sbjct: 792 TRSCPAFSTQGEFHEETGLQKGIQCAAQTYPGPFPEAIS 830
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 26.2 bits (56), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 37 ADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQ 76
A+L D R +++L V +EY E E +L V RA+ +
Sbjct: 660 AELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAE 699
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 26.2 bits (56), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 37 ADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQ 76
A+L D R +++L V +EY E E +L V RA+ +
Sbjct: 649 AELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAE 688
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 26.2 bits (56), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 37 ADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQ 76
A+L D R +++L V +EY E E +L V RA+ +
Sbjct: 628 AELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAE 667
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 26.2 bits (56), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 37 ADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQ 76
A+L D R +++L V +EY E E +L V RA+ +
Sbjct: 657 AELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAE 696
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 26.2 bits (56), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 37 ADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQ 76
A+L D R +++L V +EY E E +L V RA+ +
Sbjct: 657 AELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAE 696
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 26.2 bits (56), Expect = 9.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 37 ADLNDERVQRALHFVISEYNKATEDEYYRRLLRVLRAREQ 76
A+L D R +++L V +EY E E +L V RA+ +
Sbjct: 657 AELEDYRKRKSLEDVTAEYIHKAEHEKLMQLTNVSRAKAE 696
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,295,694
Number of Sequences: 37866
Number of extensions: 204409
Number of successful extensions: 470
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 427
Number of HSP's gapped (non-prelim): 36
length of query: 141
length of database: 18,247,518
effective HSP length: 92
effective length of query: 49
effective length of database: 14,763,846
effective search space: 723428454
effective search space used: 723428454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.