Search of human proteins with 12597661

Search of human proteins with 12597661

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|12597661 mitochondrial ribosomal protein L44 [Homo sapiens]
         (332 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|12597661 mitochondrial ribosomal protein L44 [Homo sapiens]        661   0.0  
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]        35   0.093
gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]        35   0.093
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...    33   0.27 
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...    33   0.27 
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r...    33   0.27 
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r...    33   0.27 
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    33   0.46 
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    33   0.46 
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...    32   0.60 
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r...    32   0.60 
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re...    32   0.60 
gi|116812586 leucine zipper protein 5 [Homo sapiens]                   32   0.79 
gi|124249396 coiled-coil domain containing 30 [Homo sapiens]           29   5.1  
gi|66882532 farnesyltransferase, CAAX box, alpha isoform c [Homo...    29   6.7  
gi|66882524 farnesyltransferase, CAAX box, alpha isoform b [Homo...    29   6.7  
gi|4503771 farnesyltransferase, CAAX box, alpha isoform a [Homo ...    29   6.7  
gi|27881506 ATP-binding cassette, sub-family F, member 2 isoform...    29   6.7  
gi|10947137 ATP-binding cassette, sub-family F, member 2 isoform...    29   6.7  
gi|189027048 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens]       28   8.7  
gi|189027046 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens]       28   8.7  

>gi|12597661 mitochondrial ribosomal protein L44 [Homo sapiens]
          Length = 332

 Score =  661 bits (1705), Expect = 0.0
 Identities = 332/332 (100%), Positives = 332/332 (100%)

Query: 1   MASGLVRLLQQGHRCLLAPVAPKLVPPVRGVKKGFRAAFRFQKELERQRLLRCPPPPVRR 60
           MASGLVRLLQQGHRCLLAPVAPKLVPPVRGVKKGFRAAFRFQKELERQRLLRCPPPPVRR
Sbjct: 1   MASGLVRLLQQGHRCLLAPVAPKLVPPVRGVKKGFRAAFRFQKELERQRLLRCPPPPVRR 60

Query: 61  SEKPNWDYHAEIQAFGHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLK 120
           SEKPNWDYHAEIQAFGHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLK
Sbjct: 61  SEKPNWDYHAEIQAFGHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLK 120

Query: 121 SNQELSEQGTSFSQTCLTQFLEDEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVEQLTL 180
           SNQELSEQGTSFSQTCLTQFLEDEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVEQLTL
Sbjct: 121 SNQELSEQGTSFSQTCLTQFLEDEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVEQLTL 180

Query: 181 SEEFPVPPAVLQQTFFAVIGALLQSSGPERTALFIRDFLITQMTGKELFEMWKIINPMGL 240
           SEEFPVPPAVLQQTFFAVIGALLQSSGPERTALFIRDFLITQMTGKELFEMWKIINPMGL
Sbjct: 181 SEEFPVPPAVLQQTFFAVIGALLQSSGPERTALFIRDFLITQMTGKELFEMWKIINPMGL 240

Query: 241 LVEELKKRNVSAPESRLTRQSGGTTALPLYFVGLYCDKKLIAEGPGETVLVAEEEAARVA 300
           LVEELKKRNVSAPESRLTRQSGGTTALPLYFVGLYCDKKLIAEGPGETVLVAEEEAARVA
Sbjct: 241 LVEELKKRNVSAPESRLTRQSGGTTALPLYFVGLYCDKKLIAEGPGETVLVAEEEAARVA 300

Query: 301 LRKLYGFTENRRPWNYSKPKETLRAEKSITAS 332
           LRKLYGFTENRRPWNYSKPKETLRAEKSITAS
Sbjct: 301 LRKLYGFTENRRPWNYSKPKETLRAEKSITAS 332


>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
          Length = 1337

 Score = 35.0 bits (79), Expect = 0.093
 Identities = 47/202 (23%), Positives = 73/202 (36%), Gaps = 12/202 (5%)

Query: 117  LNLKSNQELSEQGTSFSQTCLTQFLEDEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVE 176
            L L  NQ +   G S  Q   T++L   +PD     +  L   L        VA  L ++
Sbjct: 1101 LTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQ 1160

Query: 177  QLTLSEEFPVPPAVLQQTFFA-----VIGALLQSSGPERTALFIRDFLITQMTGKELFEM 231
            +  ++ +    P  L+    A      I AL      E    F+      ++    L + 
Sbjct: 1161 EYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQD 1220

Query: 232  WKIINPMGLLVEELKKRNVSAPESRL----TRQSGGTTALPLYFVGLYCDKKLIAEGPGE 287
            W   +P   L +          E  +    T Q+ G +    Y V +Y   + I  G G 
Sbjct: 1221 WN--DPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGP 1278

Query: 288  TVLVAEEEAARVALRKLYGFTE 309
            ++  AE  AA  AL K Y F +
Sbjct: 1279 SIQQAEMGAAMDALEK-YNFPQ 1299


>gi|155030234 ribonuclease III, nuclear isoform 1 [Homo sapiens]
          Length = 1374

 Score = 35.0 bits (79), Expect = 0.093
 Identities = 47/202 (23%), Positives = 73/202 (36%), Gaps = 12/202 (5%)

Query: 117  LNLKSNQELSEQGTSFSQTCLTQFLEDEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVE 176
            L L  NQ +   G S  Q   T++L   +PD     +  L   L        VA  L ++
Sbjct: 1138 LTLGHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQ 1197

Query: 177  QLTLSEEFPVPPAVLQQTFFA-----VIGALLQSSGPERTALFIRDFLITQMTGKELFEM 231
            +  ++ +    P  L+    A      I AL      E    F+      ++    L + 
Sbjct: 1198 EYAITNDKTKRPVALRTKTLADLLESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQD 1257

Query: 232  WKIINPMGLLVEELKKRNVSAPESRL----TRQSGGTTALPLYFVGLYCDKKLIAEGPGE 287
            W   +P   L +          E  +    T Q+ G +    Y V +Y   + I  G G 
Sbjct: 1258 WN--DPKSQLQQCCLTLRTEGKEPDIPLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGP 1315

Query: 288  TVLVAEEEAARVALRKLYGFTE 309
            ++  AE  AA  AL K Y F +
Sbjct: 1316 SIQQAEMGAAMDALEK-YNFPQ 1336


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1177 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1236

Query: 123  QELSEQGTSFSQTCLTQFLEDEYPD 147
            +  S +  +F Q  L    +DE  D
Sbjct: 1237 KSSSHERRAFLQAILEHEEQDEEED 1261


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1177 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1236

Query: 123  QELSEQGTSFSQTCLTQFLEDEYPD 147
            +  S +  +F Q  L    +DE  D
Sbjct: 1237 KSSSHERRAFLQAILEHEEQDEEED 1261


>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform D [Homo sapiens]
          Length = 1616

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1177 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1236

Query: 123  QELSEQGTSFSQTCLTQFLEDEYPD 147
            +  S +  +F Q  L    +DE  D
Sbjct: 1237 KSSSHERRAFLQAILEHEEQDEEED 1261


>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform C [Homo sapiens]
          Length = 1617

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1177 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1236

Query: 123  QELSEQGTSFSQTCLTQFLEDEYPD 147
            +  S +  +F Q  L    +DE  D
Sbjct: 1237 KSSSHERRAFLQAILEHEEQDEEED 1261


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 32.7 bits (73), Expect = 0.46
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1147 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1206

Query: 123  QELSEQGTSFSQTCLTQFLEDEYPD 147
            +  S +  +F Q  L    E+E  D
Sbjct: 1207 KSSSHERRAFLQAILEHEEENEEED 1231


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 32.7 bits (73), Expect = 0.46
 Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1147 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1206

Query: 123  QELSEQGTSFSQTCLTQFLEDEYPD 147
            +  S +  +F Q  L    E+E  D
Sbjct: 1207 KSSSHERRAFLQAILEHEEENEEED 1231


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 32.3 bits (72), Expect = 0.60
 Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1177 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1236

Query: 123  QELSEQGTSFSQTCLTQFLEDE 144
            +  S +  +F Q  L    +DE
Sbjct: 1237 KSSSHERRAFLQAILEHEEQDE 1258


>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 32.3 bits (72), Expect = 0.60
 Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1177 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1236

Query: 123  QELSEQGTSFSQTCLTQFLEDE 144
            +  S +  +F Q  L    +DE
Sbjct: 1237 KSSSHERRAFLQAILEHEEQDE 1258


>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin a4 isoform B [Homo sapiens]
          Length = 1647

 Score = 32.3 bits (72), Expect = 0.60
 Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 65   NWDYHAEIQAF--GHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSN 122
            +W+ H ++QA    HR+ +   + +L+   VNS   K   A + +L ++++ +   +   
Sbjct: 1177 DWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQ 1236

Query: 123  QELSEQGTSFSQTCLTQFLEDE 144
            +  S +  +F Q  L    +DE
Sbjct: 1237 KSSSHERRAFLQAILEHEEQDE 1258


>gi|116812586 leucine zipper protein 5 [Homo sapiens]
          Length = 1143

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 66  WDYHAEIQAFGHRLQENFSL-DLLKTAFVNSCYIKSEEAKR 105
           W  H  +  F + L+E+  + D+L   F+N  YIK EE +R
Sbjct: 187 WRIHQALYCFDYDLEESGEIKDMLLECFININYIKKEEGRR 227


>gi|124249396 coiled-coil domain containing 30 [Homo sapiens]
          Length = 783

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 98  IKSEEAKRQQLGIEKEAVLLNLKSNQELSEQGTSFSQTCLTQFLEDEY 145
           I+ +EA  +QL  EK     ++KSNQELSE+ +   Q    + L +EY
Sbjct: 442 IQQQEALLKQLENEKRKYDEHVKSNQELSEKLSKLQQE--KEALREEY 487


>gi|66882532 farnesyltransferase, CAAX box, alpha isoform c [Homo
           sapiens]
          Length = 312

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 83  FSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSNQELSEQGTSFSQTCLTQFLE 142
           ++L+++K    N       +   Q  G+ K   LLN     +L +   S S   L  FL 
Sbjct: 195 YTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLN-----QLLDLQPSHSSPYLIAFLV 249

Query: 143 DEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVEQLTLSEEF 184
           D Y DM      N  D L     +C +   LA E+ T+ +E+
Sbjct: 250 DIYEDMLENQCDNKEDILNKALELCEI---LAKEKDTIRKEY 288


>gi|66882524 farnesyltransferase, CAAX box, alpha isoform b [Homo
           sapiens]
          Length = 288

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 83  FSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSNQELSEQGTSFSQTCLTQFLE 142
           ++L+++K    N       +   Q  G+ K   LLN     +L +   S S   L  FL 
Sbjct: 171 YTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLN-----QLLDLQPSHSSPYLIAFLV 225

Query: 143 DEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVEQLTLSEEF 184
           D Y DM      N  D L     +C +   LA E+ T+ +E+
Sbjct: 226 DIYEDMLENQCDNKEDILNKALELCEI---LAKEKDTIRKEY 264


>gi|4503771 farnesyltransferase, CAAX box, alpha isoform a [Homo
           sapiens]
          Length = 379

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 8/102 (7%)

Query: 83  FSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSNQELSEQGTSFSQTCLTQFLE 142
           ++L+++K    N       +   Q  G+ K   LLN     +L +   S S   L  FL 
Sbjct: 262 YTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLN-----QLLDLQPSHSSPYLIAFLV 316

Query: 143 DEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVEQLTLSEEF 184
           D Y DM      N  D L     +C +   LA E+ T+ +E+
Sbjct: 317 DIYEDMLENQCDNKEDILNKALELCEI---LAKEKDTIRKEY 355


>gi|27881506 ATP-binding cassette, sub-family F, member 2 isoform a
           [Homo sapiens]
          Length = 623

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 69  HAEIQAFGHRLQENFSLDLLKTAFVNSCY--IKSEEAKRQQLG 109
           H +I  +   LQE   LDL    ++  CY  IK +E  R+ +G
Sbjct: 459 HVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIG 501


>gi|10947137 ATP-binding cassette, sub-family F, member 2 isoform b
           [Homo sapiens]
          Length = 634

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 69  HAEIQAFGHRLQENFSLDLLKTAFVNSCY--IKSEEAKRQQLG 109
           H +I  +   LQE   LDL    ++  CY  IK +E  R+ +G
Sbjct: 459 HVKIGRYHQHLQEQLDLDLSPLEYMMKCYPEIKEKEEMRKIIG 501


>gi|189027048 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens]
          Length = 643

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/50 (30%), Positives = 28/50 (56%)

Query: 72  IQAFGHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKS 121
           ++  GH  +++  +++L  A VN     + E + Q L  EKEA+L+ + S
Sbjct: 526 VETNGHSHEDSNEINVLTVALVNQDRENNIEKRSQGLKSEKEALLIGIIS 575


>gi|189027046 ecto-NOX disulfide-thiol exchanger 1 [Homo sapiens]
          Length = 643

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 15/50 (30%), Positives = 28/50 (56%)

Query: 72  IQAFGHRLQENFSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKS 121
           ++  GH  +++  +++L  A VN     + E + Q L  EKEA+L+ + S
Sbjct: 526 VETNGHSHEDSNEINVLTVALVNQDRENNIEKRSQGLKSEKEALLIGIIS 575


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.135    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,075,195
Number of Sequences: 37866
Number of extensions: 577245
Number of successful extensions: 1391
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1382
Number of HSP's gapped (non-prelim): 21
length of query: 332
length of database: 18,247,518
effective HSP length: 103
effective length of query: 229
effective length of database: 14,347,320
effective search space: 3285536280
effective search space used: 3285536280
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.