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Search of human proteins with 42516576
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42516576 glutaredoxin 5 [Homo sapiens]
(157 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42516576 glutaredoxin 5 [Homo sapiens] 322 6e-89
gi|95113651 glutaredoxin 3 [Homo sapiens] 100 4e-22
gi|169646776 glutaredoxin (thioltransferase) [Homo sapiens] 47 7e-06
gi|4504025 glutaredoxin (thioltransferase) [Homo sapiens] 47 7e-06
gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens] 38 0.004
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 37 0.007
gi|122937319 even-skipped homeobox 2 [Homo sapiens] 36 0.012
gi|4502565 calpain, small subunit 1 [Homo sapiens] 35 0.026
gi|51599151 calpain, small subunit 1 [Homo sapiens] 35 0.026
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 35 0.034
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 35 0.034
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 35 0.034
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 34 0.045
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 34 0.045
gi|4506123 PRP18 pre-mRNA processing factor 18 homolog [Homo sap... 34 0.045
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 34 0.058
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 34 0.058
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 34 0.058
gi|31742501 sorting nexin family member 27 [Homo sapiens] 34 0.058
gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens] 33 0.076
gi|33620755 YEATS domain containing 2 [Homo sapiens] 33 0.076
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 33 0.076
gi|4505441 natriuretic peptide receptor C/guanylate cyclase C (a... 33 0.100
gi|13994190 frizzled 8 [Homo sapiens] 33 0.100
gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens] 33 0.100
gi|23510368 homeobox D11 [Homo sapiens] 33 0.13
gi|89145413 short stature homeobox 2 isoform a [Homo sapiens] 33 0.13
gi|5032007 purine-rich element binding protein A [Homo sapiens] 33 0.13
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 33 0.13
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 33 0.13
>gi|42516576 glutaredoxin 5 [Homo sapiens]
Length = 157
Score = 322 bits (826), Expect = 6e-89
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 1 MSGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLKG 60
MSGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLKG
Sbjct: 1 MSGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLKG 60
Query: 61 TPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGEFVG 120
TPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGEFVG
Sbjct: 61 TPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVYLNGEFVG 120
Query: 121 GCDILLQMHQNGDLVEELKKLGIHSALLDEKKDQDSK 157
GCDILLQMHQNGDLVEELKKLGIHSALLDEKKDQDSK
Sbjct: 121 GCDILLQMHQNGDLVEELKKLGIHSALLDEKKDQDSK 157
>gi|95113651 glutaredoxin 3 [Homo sapiens]
Length = 335
Score = 100 bits (250), Expect = 4e-22
Identities = 44/97 (45%), Positives = 70/97 (72%), Gaps = 1/97 (1%)
Query: 43 EQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKD 102
E+L L K V++F+KG ++ +CGFS +++IL GV +Y +++L+D E+RQG+K
Sbjct: 237 ERLKVLTNKASVMLFMKGNKQEAKCGFSKQILEILNSTGV-EYETFDILEDEEVRQGLKA 295
Query: 103 YSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELK 139
YSNWPT PQ+Y+ GE VGG DI+ ++ +NG+L+ L+
Sbjct: 296 YSNWPTYPQLYVKGELVGGLDIVKELKENGELLPILR 332
Score = 91.7 bits (226), Expect = 2e-19
Identities = 37/91 (40%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Query: 44 QLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLDDPELRQGIKDY 103
+L L ++F+KGTP++P+CGFS +V+IL H ++ ++++++ D E+RQG+K Y
Sbjct: 136 RLKKLTHAAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQ-FSSFDIFSDEEVRQGLKAY 194
Query: 104 SNWPTIPQVYLNGEFVGGCDILLQMHQNGDL 134
S+WPT PQ+Y++GE +GG DI+ ++ + +L
Sbjct: 195 SSWPTYPQLYVSGELIGGLDIIKELEASEEL 225
>gi|169646776 glutaredoxin (thioltransferase) [Homo sapiens]
Length = 106
Score = 47.0 bits (110), Expect = 7e-06
Identities = 26/102 (25%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 43 EQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRL-HGVRDYAAYNVLDDP-ELRQGI 100
E ++ ++ KVVVF+K P P C + ++ L + G+ ++ + E++ +
Sbjct: 4 EFVNCKIQPGKVVVFIK--PTCPYCRRAQEILSQLPIKQGLLEFVDITATNHTNEIQDYL 61
Query: 101 KDYSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKKLG 142
+ + T+P+V++ + +GGC L+ + Q+G+L+ LK++G
Sbjct: 62 QQLTGARTVPRVFIGKDCIGGCSDLVSLQQSGELLTRLKQIG 103
>gi|4504025 glutaredoxin (thioltransferase) [Homo sapiens]
Length = 106
Score = 47.0 bits (110), Expect = 7e-06
Identities = 26/102 (25%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 43 EQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRL-HGVRDYAAYNVLDDP-ELRQGI 100
E ++ ++ KVVVF+K P P C + ++ L + G+ ++ + E++ +
Sbjct: 4 EFVNCKIQPGKVVVFIK--PTCPYCRRAQEILSQLPIKQGLLEFVDITATNHTNEIQDYL 61
Query: 101 KDYSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKKLG 142
+ + T+P+V++ + +GGC L+ + Q+G+L+ LK++G
Sbjct: 62 QQLTGARTVPRVFIGKDCIGGCSDLVSLQQSGELLTRLKQIG 103
>gi|122937349 glutaredoxin, cysteine rich 1 [Homo sapiens]
Length = 290
Score = 37.7 bits (86), Expect = 0.004
Identities = 15/47 (31%), Positives = 32/47 (68%)
Query: 95 ELRQGIKDYSNWPTIPQVYLNGEFVGGCDILLQMHQNGDLVEELKKL 141
EL + + S P++P V+++G ++GG + +L M+++G+L + L K+
Sbjct: 184 ELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKI 230
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 37.0 bits (84), Expect = 0.007
Identities = 19/40 (47%), Positives = 21/40 (52%)
Query: 3 GSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSA 42
G GRA + G GGGG GPG A+G G GGG A
Sbjct: 12 GGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKA 51
Score = 27.7 bits (60), Expect = 4.2
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 4/28 (14%)
Query: 18 GAGGG----GLWGPGVRAAGSGAGGGGS 41
G GGG G G GV A+ SG G GGS
Sbjct: 45 GTGGGKASVGAMGGGVGASSSGGGPGGS 72
>gi|122937319 even-skipped homeobox 2 [Homo sapiens]
Length = 476
Score = 36.2 bits (82), Expect = 0.012
Identities = 19/38 (50%), Positives = 21/38 (55%)
Query: 2 SGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGG 39
S + AAAA RG GGGG G G G+GAGGG
Sbjct: 397 SAAAAAAAAAAALGSRGGGGGGGGGGGGGGGGAGAGGG 434
Score = 26.9 bits (58), Expect = 7.1
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 2 SGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGS 41
S AAAA G+ GGG G G G G GGGG+
Sbjct: 394 SSQSAAAAAAAAAAALGSRGGGGGGGG----GGGGGGGGA 429
>gi|4502565 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 35.0 bits (79), Expect = 0.026
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 1 MSGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQL 45
+ G LG L+ G GGGG G G G G GGGG+A ++
Sbjct: 21 LGGGLGNVLGGLISGAGGGGGGGGGGGG----GGGGGGGGTAMRI 61
Score = 28.1 bits (61), Expect = 3.2
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 8/33 (24%)
Query: 16 GRGAGGGGLWGPG--------VRAAGSGAGGGG 40
G G GGGG G G + AG G GGGG
Sbjct: 12 GGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGG 44
>gi|51599151 calpain, small subunit 1 [Homo sapiens]
Length = 268
Score = 35.0 bits (79), Expect = 0.026
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 1 MSGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQL 45
+ G LG L+ G GGGG G G G G GGGG+A ++
Sbjct: 21 LGGGLGNVLGGLISGAGGGGGGGGGGGG----GGGGGGGGTAMRI 61
Score = 28.1 bits (61), Expect = 3.2
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 8/33 (24%)
Query: 16 GRGAGGGGLWGPG--------VRAAGSGAGGGG 40
G G GGGG G G + AG G GGGG
Sbjct: 12 GGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGG 44
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 34.7 bits (78), Expect = 0.034
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 4 SLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGG 40
S AAA + G G GGGG G G + G GGGG
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGG 98
Score = 31.6 bits (70), Expect = 0.29
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGG 40
G G GGG P + AA +G+GGGG
Sbjct: 95 GGGGGGGSNCNPNLAAASNGSGGGG 119
Score = 29.3 bits (64), Expect = 1.4
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G+GGGG G G G GGGGS
Sbjct: 79 GGGSGGGG--GSSGNGGGGGGGGGGS 102
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 34.7 bits (78), Expect = 0.034
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 4 SLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGG 40
S AAA + G G GGGG G G + G GGGG
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGG 98
Score = 31.6 bits (70), Expect = 0.29
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGG 40
G G GGG P + AA +G+GGGG
Sbjct: 95 GGGGGGGSNCNPNLAAASNGSGGGG 119
Score = 29.3 bits (64), Expect = 1.4
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G+GGGG G G G GGGGS
Sbjct: 79 GGGSGGGG--GSSGNGGGGGGGGGGS 102
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 34.7 bits (78), Expect = 0.034
Identities = 17/37 (45%), Positives = 19/37 (51%)
Query: 4 SLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGG 40
S AAA + G G GGGG G G + G GGGG
Sbjct: 62 SAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGG 98
Score = 31.6 bits (70), Expect = 0.29
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGG 40
G G GGG P + AA +G+GGGG
Sbjct: 95 GGGGGGGSNCNPNLAAASNGSGGGG 119
Score = 29.3 bits (64), Expect = 1.4
Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G+GGGG G G G GGGGS
Sbjct: 79 GGGSGGGG--GSSGNGGGGGGGGGGS 102
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 34.3 bits (77), Expect = 0.045
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G GGGG G G G G GGGGS
Sbjct: 66 GAGGGGGGFGGGGGFGGGGGGGGGGS 91
Score = 29.6 bits (65), Expect = 1.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDAL 48
G G GGGG +G G G G+ GGG L L
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGL 103
Score = 26.9 bits (58), Expect = 7.1
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGG 40
G GAGGGG G G G GGGG
Sbjct: 64 GAGAGGGG----GGFGGGGGFGGGG 84
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 34.3 bits (77), Expect = 0.045
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G GGGG G G G G GGGGS
Sbjct: 66 GAGGGGGGFGGGGGFGGGGGGGGGGS 91
Score = 29.6 bits (65), Expect = 1.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDAL 48
G G GGGG +G G G G+ GGG L L
Sbjct: 71 GGGFGGGGGFGGGGGGGGGGSFGGGGPPGLGGL 103
Score = 26.9 bits (58), Expect = 7.1
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGG 40
G GAGGGG G G G GGGG
Sbjct: 64 GAGAGGGG----GGFGGGGGFGGGG 84
>gi|4506123 PRP18 pre-mRNA processing factor 18 homolog [Homo
sapiens]
Length = 342
Score = 34.3 bits (77), Expect = 0.045
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 77 LRLHGVRDYAAYNVLDD-----PELRQGIKD--YSNWPTIPQVYLNGEFVGGCDIL---- 125
+RL G DY A+ L PE+ +G+++ + I Q YLN E VGG +
Sbjct: 95 IRLFGETDYDAFQRLRKIEILTPEVNKGLRNDLKAALDKIDQQYLN-EIVGGQEPGEEDT 153
Query: 126 ---LQMHQNGDLVEELKKLGIHSALLDEKKDQD 155
L++H+ +EEL+ LG D+ KD D
Sbjct: 154 QNDLKVHEENTTIEELEALGESLGKGDDHKDMD 186
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 33.9 bits (76), Expect = 0.058
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 3 GSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSA 42
G+ G AAA+ G GAGGGG G G G GGGG A
Sbjct: 201 GAAGSAAASAGGAG-GAGGGGPASAGGGGGGGGGGGGGGA 239
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 33.9 bits (76), Expect = 0.058
Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 3 GSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSA 42
G+ G AAA+ G GAGGGG G G G GGGG A
Sbjct: 201 GAAGSAAASAGGAG-GAGGGGPASAGGGGGGGGGGGGGGA 239
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 33.9 bits (76), Expect = 0.058
Identities = 34/115 (29%), Positives = 42/115 (36%), Gaps = 11/115 (9%)
Query: 3 GSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLKGTP 62
G G AAA GAGG G +G G G GGG A + L V + L G P
Sbjct: 58 GGGGSAAAT------GAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGP 111
Query: 63 EQPQCGFSNAVVQILRLHGVRDYAAYN-----VLDDPELRQGIKDYSNWPTIPQV 112
G S+ L GV A+ V L G+ + P +P V
Sbjct: 112 GPGGGGGSSGGAGALSAAGVIRVPAHRPLAGAVAHPQPLATGLPTVPSVPAMPGV 166
>gi|31742501 sorting nexin family member 27 [Homo sapiens]
Length = 528
Score = 33.9 bits (76), Expect = 0.058
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 17 RGAGGGGLWGPGVRAAGSGAGGGG 40
R GGGG G G+ AG+G GGGG
Sbjct: 16 RNGGGGGGGGSGLHCAGNGGGGGG 39
>gi|18375673 regulator of nonsense transcripts 1 [Homo sapiens]
Length = 1118
Score = 33.5 bits (75), Expect = 0.076
Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
Query: 18 GAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVV 55
G GGGG GPG GAG G +A QLDA V + ++
Sbjct: 53 GPGGGGAGGPG------GAGAGAAAGQLDAQVGPEGIL 84
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 33.5 bits (75), Expect = 0.076
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 6 GRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSA 42
G AA+ G G GGGG G G GS GGGG+A
Sbjct: 794 GSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGGGGTA 830
Score = 30.0 bits (66), Expect = 0.84
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 2 SGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGG 40
+ +L +AA G G GGGG G G + G G+ GGG
Sbjct: 788 NANLQSGSAASGGSGAGGGGGGGGGGGSGSGGGGSTGGG 826
Score = 28.5 bits (62), Expect = 2.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G GG G G G G G GGG+
Sbjct: 809 GGGGGGSGSGGGGSTGGGGGTAGGGT 834
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 33.5 bits (75), Expect = 0.076
Identities = 19/40 (47%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 4 SLGRAAAALLRWGRGAGGG-GLWGPGVRAAGSGAGGGGSA 42
S G AA L G G GG G +G AG G GGGG A
Sbjct: 314 SKGSVAAGLAGAGGGGGGAVGAFGGAAGGAGGGGGGGGGA 353
Score = 27.3 bits (59), Expect = 5.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 9/46 (19%)
Query: 1 MSGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLD 46
++G+ G A+ +G AGG G G G GGGG+ + D
Sbjct: 322 LAGAGGGGGGAVGAFGGAAGGAG---------GGGGGGGGAGAERD 358
Score = 26.6 bits (57), Expect = 9.3
Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 3 GSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKK--DKVVVFLKG 60
G G A A GAGGGG G G A G G +A K+ V V + G
Sbjct: 327 GGGGGAVGAFGGAAGGAGGGGGGGGGAGAERDRGGASGFLTLHNAFPKEAGGGVTVTVTG 386
Query: 61 TPEQP 65
P P
Sbjct: 387 PPAPP 391
>gi|4505441 natriuretic peptide receptor C/guanylate cyclase C
(atrionatriuretic peptide receptor C) [Homo sapiens]
Length = 540
Score = 33.1 bits (74), Expect = 0.100
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 12 LLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDAL-VKKDKVVVFL 58
LL W AGG G G GV G GAG GG ++ +AL +K +V+V L
Sbjct: 14 LLGWALLAGGTG--GGGVGGGGGGAGIGGGRQEREALPPQKIEVLVLL 59
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 33.1 bits (74), Expect = 0.100
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 6 GRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSA 42
G A A G G GGGG GPG G G GGGG +
Sbjct: 631 GGAGATAAGGGGGPGGGGGGGPG---GGGGPGGGGGS 664
Score = 30.8 bits (68), Expect = 0.49
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 18 GAGGGGLWGPGVRAAGSGAGGGGSAEQLDAL 48
GAGG G G AAG+GAGG G + + L
Sbjct: 349 GAGGAGGAAAGAGAAGAGAGGPGGRGEYEEL 379
Score = 28.9 bits (63), Expect = 1.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G GG G G AAG+GA G G+
Sbjct: 342 GGAPGAGGAGGAGGAAAGAGAAGAGA 367
Score = 28.9 bits (63), Expect = 1.9
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 16 GRGAGGGGLWGPGVRAAGSGA-GGGGSAEQLDAL 48
G G GG G G AG+G GG G E+L A+
Sbjct: 349 GAGGAGGAAAGAGAAGAGAGGPGGRGEYEELGAV 382
Score = 27.3 bits (59), Expect = 5.5
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 4/27 (14%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGSA 42
GRG GGG P R G GGGG A
Sbjct: 196 GRGGGGGDAAAPPAR----GGGGGGKA 218
>gi|5902724 neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 492
Score = 33.1 bits (74), Expect = 0.100
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 3 GSLGRAAAALLRWGRGAGGG--GLWGPGVRAAGSGAGGGG--SAEQLDALVKKDKVVV 56
GS AAAA G GAGGG G GP V AA + GG +AE+L A K+ V +
Sbjct: 354 GSFALAAAANGYLGAGAGGGAGGGGGPLVAAAAAAGAAGGFLTAEKLAAESAKELVEI 411
>gi|23510368 homeobox D11 [Homo sapiens]
Length = 338
Score = 32.7 bits (73), Expect = 0.13
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 17 RGAGGGGLWGPGVRAAGSGAGGGGS 41
RG GGGG G G G G GGGG+
Sbjct: 76 RGGGGGGSAGGGSSGGGPGGGGGGA 100
Score = 27.3 bits (59), Expect = 5.5
Identities = 25/85 (29%), Positives = 29/85 (34%), Gaps = 16/85 (18%)
Query: 3 GSLGRAAAALLRWGRGAGGGGLWG--PGVRAAGSGAGGGGSAEQL--------------D 46
G G A G G GGGG G P AA + A +AE+ D
Sbjct: 79 GGGGSAGGGSSGGGPGGGGGGAGGYAPYYAAAAAAAAAAAAAEEAAMQRELLPPAGRRPD 138
Query: 47 ALVKKDKVVVFLKGTPEQPQCGFSN 71
L K + V G P P SN
Sbjct: 139 VLFKAPEPVCAAPGPPHGPAGAASN 163
>gi|89145413 short stature homeobox 2 isoform a [Homo sapiens]
Length = 331
Score = 32.7 bits (73), Expect = 0.13
Identities = 16/26 (61%), Positives = 16/26 (61%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G GGGG G G AG GAGGG S
Sbjct: 67 GGGGGGGGGGGVGGGGAGGGAGGGRS 92
Score = 32.0 bits (71), Expect = 0.22
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGG 40
G G GGGG G GV G+G G GG
Sbjct: 65 GGGGGGGGGGGGGVGGGGAGGGAGG 89
Score = 31.2 bits (69), Expect = 0.38
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 2 SGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGS 41
+G R++ A+ G G GGGG G G G G GGGG+
Sbjct: 46 AGRDDRSSPAVRAAGGGGGGGG--GGGGGGGGGGVGGGGA 83
Score = 30.4 bits (67), Expect = 0.65
Identities = 14/24 (58%), Positives = 14/24 (58%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGG 39
G G GGGG G G G GAGGG
Sbjct: 63 GGGGGGGGGGGGGGGVGGGGAGGG 86
Score = 29.3 bits (64), Expect = 1.4
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGS 41
G G GGGG G G G G GGG+
Sbjct: 62 GGGGGGGGGGGGGGGGVGGGGAGGGA 87
>gi|5032007 purine-rich element binding protein A [Homo sapiens]
Length = 322
Score = 32.7 bits (73), Expect = 0.13
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 7/39 (17%)
Query: 3 GSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGS 41
GSLG + G G+GGGG G G GSG GGGG+
Sbjct: 19 GSLGHPGS-----GSGSGGGG--GGGGGGGGSGGGGGGA 50
Score = 26.6 bits (57), Expect = 9.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGG 40
G G GG G +GSG GGGG
Sbjct: 12 GAALGSGGSLGHPGSGSGSGGGGGG 36
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 32.7 bits (73), Expect = 0.13
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 8 AAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGS 41
AA + + G G+G GG G +GSG GGGG+
Sbjct: 469 AAVSAVHRGGGSGSGGAGGGSGGGSGSGGGGGGA 502
Score = 31.6 bits (70), Expect = 0.29
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGSA 42
G G G GG G G G+G GGGGS+
Sbjct: 484 GAGGGSGGGSGSGGGGGGAGGGGGGSS 510
Score = 30.4 bits (67), Expect = 0.65
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 8 AAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGG 40
AAAA+ RG G G G GSG+GGGG
Sbjct: 467 AAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGGG 499
Score = 30.0 bits (66), Expect = 0.84
Identities = 17/46 (36%), Positives = 22/46 (47%)
Query: 2 SGSLGRAAAALLRWGRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDA 47
SGS G + G G GGGG G G ++G G+G G L +
Sbjct: 480 SGSGGAGGGSGGGSGSGGGGGGAGGGGGGSSGGGSGTAGGHSGLSS 525
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 32.7 bits (73), Expect = 0.13
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 16 GRGAGGGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDK 53
G G GGG G GSG+G GGS+ + KK K
Sbjct: 201 GGGGGGGSSSGSSGGGGGSGSGSGGSSSSSSSSSKKSK 238
Score = 29.3 bits (64), Expect = 1.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 18 GAGGGGLWGPGVRAAGSGAGGGGSAEQLDA 47
G GGGG+ PG+ +G GG S L A
Sbjct: 92 GGGGGGVGVPGLLVGSAGVGGDPSLSSLPA 121
Score = 27.3 bits (59), Expect = 5.5
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 7/31 (22%)
Query: 10 AALLRWGRGAGGGGLWGPGVRAAGSGAGGGG 40
A LL G GGGG +AGSG GGGG
Sbjct: 73 AGLLLPPPGGGGGG-------SAGSGGGGGG 96
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.139 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,773,420
Number of Sequences: 37866
Number of extensions: 343105
Number of successful extensions: 4567
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 2625
Number of HSP's gapped (non-prelim): 1453
length of query: 157
length of database: 18,247,518
effective HSP length: 94
effective length of query: 63
effective length of database: 14,688,114
effective search space: 925351182
effective search space used: 925351182
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.