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Search of human proteins with 41406084
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens]
(203 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens] 410 e-115
gi|32967607 glutathione peroxidase 2 [Homo sapiens] 256 1e-68
gi|4557629 glutathione peroxidase 5 isoform 1 precursor [Homo sa... 171 3e-43
gi|41406082 glutathione peroxidase 1 isoform 2 [Homo sapiens] 164 4e-41
gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens] 162 2e-40
gi|33186887 glutathione peroxidase 6 [Homo sapiens] 145 2e-35
gi|75709200 glutathione peroxidase 4 isoform A precursor [Homo s... 101 5e-22
gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo s... 100 1e-21
gi|15618997 glutathione peroxidase 7 [Homo sapiens] 99 2e-21
gi|90903238 glutathione peroxidase 4 isoform B precursor [Homo s... 89 3e-18
gi|192455698 glutathione peroxidase 8 [Homo sapiens] 86 3e-17
gi|40316837 ATPase, class I, type 8B, member 2 isoform a [Homo s... 32 0.48
gi|197100900 iroquois homeobox 2 [Homo sapiens] 30 1.8
gi|39930475 iroquois homeobox 2 [Homo sapiens] 30 1.8
gi|69885084 p120E4F [Homo sapiens] 29 2.4
gi|89145415 transmembrane protein 103 [Homo sapiens] 29 3.1
gi|59806361 hypothetical protein LOC387104 [Homo sapiens] 28 4.1
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens] 28 5.3
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens] 28 5.3
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens] 28 5.3
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens] 28 5.3
gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [H... 28 5.3
gi|28559063 DNA cytosine-5 methyltransferase 3 beta isoform 3 [H... 28 5.3
gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [H... 28 5.3
gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Ho... 28 5.3
gi|48314820 5-oxoprolinase (ATP-hydrolysing) [Homo sapiens] 28 5.3
gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens] 28 7.0
gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens] 28 7.0
gi|221625538 MORC family CW-type zinc finger 1 [Homo sapiens] 28 7.0
gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 28 7.0
>gi|41406084 glutathione peroxidase 1 isoform 1 [Homo sapiens]
Length = 203
Score = 410 bits (1054), Expect = e-115
Identities = 203/203 (100%), Positives = 203/203 (100%)
Query: 1 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMN 60
MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASL GTTVRDYTQMN
Sbjct: 1 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMN 60
Query: 61 ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGA 120
ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGA
Sbjct: 61 ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGA 120
Query: 121 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS 180
GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS
Sbjct: 121 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS 180
Query: 181 RRFQTIDIEPDIEALLSQGPSCA 203
RRFQTIDIEPDIEALLSQGPSCA
Sbjct: 181 RRFQTIDIEPDIEALLSQGPSCA 203
>gi|32967607 glutathione peroxidase 2 [Homo sapiens]
Length = 190
Score = 256 bits (653), Expect = 1e-68
Identities = 128/187 (68%), Positives = 148/187 (79%), Gaps = 2/187 (1%)
Query: 10 AAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPR 69
A A+S Y SA L GE V + RG+ +LIENVASL GTT RD+TQ+NELQ R PR
Sbjct: 2 AFIAKSFYDLSAISL-DGEKVDFNTFRGRAVLIENVASLUGTTTRDFTQLNELQCRF-PR 59
Query: 70 GLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFL 129
LVVLGFPCNQFGHQEN +NEEILNSLKYVRPGGG++P F L +KCEVNG HP+FA+L
Sbjct: 60 RLVVLGFPCNQFGHQENCQNEEILNSLKYVRPGGGYQPTFTLVQKCEVNGQNEHPVFAYL 119
Query: 130 REALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIE 189
++ LP P DD +LMTDPKLI WSPV R+DVAWNFEKFL+GP+G P RRYSR F TI+IE
Sbjct: 120 KDKLPYPYDDPFSLMTDPKLIIWSPVRRSDVAWNFEKFLIGPEGEPFRRYSRTFPTINIE 179
Query: 190 PDIEALL 196
PDI+ LL
Sbjct: 180 PDIKRLL 186
>gi|4557629 glutathione peroxidase 5 isoform 1 precursor [Homo
sapiens]
Length = 221
Score = 171 bits (434), Expect = 3e-43
Identities = 91/184 (49%), Positives = 117/184 (63%), Gaps = 5/184 (2%)
Query: 15 SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVL 74
++Y + A L E VS GK +L NVA+ G T + Y ++N LQ L P GLVVL
Sbjct: 39 TIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTAQ-YPELNALQEELKPYGLVVL 97
Query: 75 GFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALP 134
GFPCNQFG QE N+EIL LKYVRPGGGF P+F LFEK +VNG +F+FL+ + P
Sbjct: 98 GFPCNQFGKQEPGDNKEILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCP 157
Query: 135 APSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 194
PS+ ++ K I+W PV +D+ WNFEKFLVGPDG+P+ R+S R ++ DI A
Sbjct: 158 HPSE----ILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIPVMRWSHRATVSSVKTDILA 213
Query: 195 LLSQ 198
L Q
Sbjct: 214 YLKQ 217
>gi|41406082 glutathione peroxidase 1 isoform 2 [Homo sapiens]
Length = 98
Score = 164 bits (416), Expect = 4e-41
Identities = 84/84 (100%), Positives = 84/84 (100%)
Query: 1 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMN 60
MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASL GTTVRDYTQMN
Sbjct: 1 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMN 60
Query: 61 ELQRRLGPRGLVVLGFPCNQFGHQ 84
ELQRRLGPRGLVVLGFPCNQFGHQ
Sbjct: 61 ELQRRLGPRGLVVLGFPCNQFGHQ 84
>gi|6006001 glutathione peroxidase 3 precursor [Homo sapiens]
Length = 226
Score = 162 bits (410), Expect = 2e-40
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 5/178 (2%)
Query: 15 SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVL 74
++Y + A + G E + GK +L NVAS G T + Y ++N LQ L P GLV+L
Sbjct: 39 TIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYUGLTGQ-YIELNALQEELAPFGLVIL 97
Query: 75 GFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALP 134
GFPCNQFG QE +N EIL +LKYVRPGGGF PNF LFEK +VNG + FL+ + P
Sbjct: 98 GFPCNQFGKQEPGENSEILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCP 157
Query: 135 APSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDI 192
S+ L+ + W P+ +D+ WNFEKFLVGPDG+P+ R+ R +++ DI
Sbjct: 158 PTSE----LLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIPIMRWHHRTTVSNVKMDI 211
>gi|33186887 glutathione peroxidase 6 [Homo sapiens]
Length = 221
Score = 145 bits (367), Expect = 2e-35
Identities = 79/184 (42%), Positives = 105/184 (57%), Gaps = 5/184 (2%)
Query: 15 SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVL 74
++Y + A L G E + GK +L NVA+ G + Y ++N LQ L G++VL
Sbjct: 39 TIYEYGALTLNGEEYIQFKQFAGKHVLFVNVAAYUGLAAQ-YPELNALQEELKNFGVIVL 97
Query: 75 GFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALP 134
FPCNQFG QE N EIL LKYV PG GF P+F LFEK +VNG +F FL+ + P
Sbjct: 98 AFPCNQFGKQEPGTNSEILLGLKYVCPGSGFVPSFQLFEKGDVNGEKEQKVFTFLKNSCP 157
Query: 135 APSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 194
SD L+ + W P+ +D+ WNFEKFLVGPDGVP+ + + ++ DI
Sbjct: 158 PTSD----LLGSSSQLFWEPMKVHDIRWNFEKFLVGPDGVPVMHWFHQAPVSTVKSDILE 213
Query: 195 LLSQ 198
L Q
Sbjct: 214 YLKQ 217
>gi|75709200 glutathione peroxidase 4 isoform A precursor [Homo
sapiens]
Length = 197
Score = 101 bits (251), Expect = 5e-22
Identities = 69/192 (35%), Positives = 97/192 (50%), Gaps = 26/192 (13%)
Query: 1 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMN 60
MCA+R A+S++ FSA+ + G V+L RG V ++ NVAS G T +YTQ+
Sbjct: 28 MCASR--DDWRCARSMHEFSAKDI-DGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLV 84
Query: 61 ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGA 120
+L R GL +L FPCNQFG QE NEEI G+ F +F K VNG
Sbjct: 85 DLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGD 138
Query: 121 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS 180
AHPL+ +++ PK + N + WNF KFL+ +G ++RY
Sbjct: 139 DAHPLWKWMK--------------IQPK---GKGILGNAIKWNFTKFLIDKNGCVVKRYG 181
Query: 181 RRFQTIDIEPDI 192
+ + IE D+
Sbjct: 182 PMEEPLVIEKDL 193
>gi|90903240 glutathione peroxidase 4 isoform C precursor [Homo
sapiens]
Length = 234
Score = 100 bits (248), Expect = 1e-21
Identities = 65/180 (36%), Positives = 92/180 (51%), Gaps = 24/180 (13%)
Query: 13 AQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLV 72
A+S++ FSA+ + G V+L RG V ++ NVAS G T +YTQ+ +L R GL
Sbjct: 75 ARSMHEFSAKDI-DGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLR 133
Query: 73 VLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREA 132
+L FPCNQFG QE NEEI G+ F +F K VNG AHPL+ +++
Sbjct: 134 ILAFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGDDAHPLWKWMK-- 185
Query: 133 LPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDI 192
PK + N + WNF KFL+ +G ++RY + + IE D+
Sbjct: 186 ------------IQPK---GKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDL 230
>gi|15618997 glutathione peroxidase 7 [Homo sapiens]
Length = 187
Score = 99.0 bits (245), Expect = 2e-21
Identities = 66/190 (34%), Positives = 87/190 (45%), Gaps = 29/190 (15%)
Query: 7 AAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRL 66
AA A Q Y F A + G + VSL RG V L+ NVAS G T + Y + +LQR L
Sbjct: 16 AACAQQEQDFYDFKAVNIRG-KLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDL 74
Query: 67 GPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLF 126
GP VL FPCNQFG QE N+EI + + + +F +F K V G GAHP F
Sbjct: 75 GPHHFNVLAFPCNQFGQQEPDSNKEIESFARRT-----YSVSFPMFSKIAVTGTGAHPAF 129
Query: 127 AFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTI 186
+L + + WNF K+LV PDG + +
Sbjct: 130 KYLAQ-----------------------TSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVE 166
Query: 187 DIEPDIEALL 196
++ P I AL+
Sbjct: 167 EVRPQITALV 176
>gi|90903238 glutathione peroxidase 4 isoform B precursor [Homo
sapiens]
Length = 227
Score = 88.6 bits (218), Expect = 3e-18
Identities = 66/186 (35%), Positives = 90/186 (48%), Gaps = 26/186 (13%)
Query: 1 MCAARLAAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMN 60
MCA+R A+S++ FSA+ + G V+L RG V ++ NVAS G T +YTQ+
Sbjct: 28 MCASR--DDWRCARSMHEFSAKDI-DGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLV 84
Query: 61 ELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGA 120
+L R GL +L FPCNQFG QE NEEI G+ F +F K VNG
Sbjct: 85 DLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEF------AAGYNVKFDMFSKICVNGD 138
Query: 121 GAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYS 180
AHPL+ +++ PK + N + WNF KF VP R+
Sbjct: 139 DAHPLWKWMK--------------IQPK---GKGILGNAIKWNFTKFGHRLSTVPHRQER 181
Query: 181 RRFQTI 186
R + +
Sbjct: 182 LRGEAL 187
>gi|192455698 glutathione peroxidase 8 [Homo sapiens]
Length = 209
Score = 85.5 bits (210), Expect = 3e-17
Identities = 60/184 (32%), Positives = 85/184 (46%), Gaps = 29/184 (15%)
Query: 15 SVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVL 74
S YAF + A G VSL +GKV L+ NVAS T R+Y + EL + GP VL
Sbjct: 46 SFYAFEVKD-AKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVL 104
Query: 75 GFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALP 134
FPCNQFG E ++E+ + + R G F +F K ++ G+ P F FL ++
Sbjct: 105 AFPCNQFGESEPRPSKEVES---FARKNYGV--TFPIFHKIKILGSEGEPAFRFLVDS-- 157
Query: 135 APSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEA 194
+ + WNF K+LV P+G ++ + I PDI A
Sbjct: 158 ---------------------SKKEPRWNFWKYLVNPEGQVVKFWKPEEPIEVIRPDIAA 196
Query: 195 LLSQ 198
L+ Q
Sbjct: 197 LVRQ 200
>gi|40316837 ATPase, class I, type 8B, member 2 isoform a [Homo
sapiens]
Length = 1223
Score = 31.6 bits (70), Expect = 0.48
Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 8/73 (10%)
Query: 89 NEEILNSLKYVRPG--GGFEPNFMLFEKCEVNGAGAHPLFAFLREAL-----PAPSDDAT 141
NEE L ++Y+ G N M+F KC +NG +F L P P D +
Sbjct: 413 NEE-LGQVEYIFSDKTGTLTQNIMVFNKCSINGHSYGDVFDVLGHKAELGERPEPVDFSF 471
Query: 142 ALMTDPKLITWSP 154
+ D K + W P
Sbjct: 472 NPLADKKFLFWDP 484
>gi|197100900 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 29.6 bits (65), Expect = 1.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 98 YVRPGGGFEPNFMLFEKCEVNGAGAHP 124
Y PGGG+EP E C V G G P
Sbjct: 443 YRSPGGGYEPKKDASEGCTVVGGGVQP 469
>gi|39930475 iroquois homeobox 2 [Homo sapiens]
Length = 471
Score = 29.6 bits (65), Expect = 1.8
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 98 YVRPGGGFEPNFMLFEKCEVNGAGAHP 124
Y PGGG+EP E C V G G P
Sbjct: 443 YRSPGGGYEPKKDASEGCTVVGGGVQP 469
>gi|69885084 p120E4F [Homo sapiens]
Length = 784
Score = 29.3 bits (64), Expect = 2.4
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 7 AAAAAAAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRD-YTQMNELQ-- 63
A A + A + +A GEP+ + I V GT + + + QM EL
Sbjct: 292 ARAGSGAGAAGLGTATSSVTGEPIETSPV------IHLVTDAKGTVIHEVHVQMQELSLG 345
Query: 64 -RRLGPRGLVVLGFPCNQFGHQENAKNEEILNS 95
+ L P V PC+ G +EN ++ + NS
Sbjct: 346 MKALAPEPPVSQELPCSSEGSRENLLHQAMQNS 378
>gi|89145415 transmembrane protein 103 [Homo sapiens]
Length = 266
Score = 28.9 bits (63), Expect = 3.1
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 106 EPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLI 150
EP+ + F + E N PLF F+REAL P D A T P L+
Sbjct: 100 EPHPLQFLR-EANAGNLKPLFEFVREAL-KPVDSGEARWTYPVLL 142
>gi|59806361 hypothetical protein LOC387104 [Homo sapiens]
Length = 947
Score = 28.5 bits (62), Expect = 4.1
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 17/89 (19%)
Query: 20 SARPLAGGEPVSLGSLRGKVLLIE--------NVASLUGTTVRDYTQMNELQRRLGPRGL 71
SA PL + SL LR + L+E NVA L R ++N+ + + G
Sbjct: 630 SANPLMREQSESLSELRQHLQLVEDETELLRRNVADLEEQNKRITAELNKYKYKSGGH-- 687
Query: 72 VVLGFPCNQFGHQENAKNEEILNSLKYVR 100
+ H +NAK E + LK R
Sbjct: 688 -------DSARHHDNAKTEALQEELKAAR 709
>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
Length = 517
Score = 28.1 bits (61), Expect = 5.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 4 ARLAAAAAAAQSVYAFSARPLAGGEPVSLGS-LRGKVLLIENVASLUG 50
A+L AA A+A+ + +R +G EP +GS +R L+ V SL G
Sbjct: 41 AKLGAAEASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLGG 88
>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
Length = 500
Score = 28.1 bits (61), Expect = 5.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 4 ARLAAAAAAAQSVYAFSARPLAGGEPVSLGS-LRGKVLLIENVASLUG 50
A+L AA A+A+ + +R +G EP +GS +R L+ V SL G
Sbjct: 41 AKLGAAEASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLGG 88
>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
Length = 514
Score = 28.1 bits (61), Expect = 5.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 4 ARLAAAAAAAQSVYAFSARPLAGGEPVSLGS-LRGKVLLIENVASLUG 50
A+L AA A+A+ + +R +G EP +GS +R L+ V SL G
Sbjct: 41 AKLGAAEASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLGG 88
>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
Length = 497
Score = 28.1 bits (61), Expect = 5.3
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 4 ARLAAAAAAAQSVYAFSARPLAGGEPVSLGS-LRGKVLLIENVASLUG 50
A+L AA A+A+ + +R +G EP +GS +R L+ V SL G
Sbjct: 41 AKLGAAEASAERLQGRRSRGASGSEPQQMGSDVRDLNALLPAVPSLGG 88
>gi|28559065 DNA cytosine-5 methyltransferase 3 beta isoform 6 [Homo
sapiens]
Length = 845
Score = 28.1 bits (61), Expect = 5.3
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 23/99 (23%)
Query: 28 EPVSLGSLR--GKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQE 85
E +++G+++ G + + +V ++ + ++ GP LV+ G PCN +
Sbjct: 601 ESIAVGTVKHEGNIKYVNDVRNITKKNIEEW----------GPFDLVIGGSPCNDLSNVN 650
Query: 86 NAKNE----------EILNSLKYVRPGGGFE-PNFMLFE 113
A+ E + L Y RP G + P F +FE
Sbjct: 651 PARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMFE 689
>gi|28559063 DNA cytosine-5 methyltransferase 3 beta isoform 3 [Homo
sapiens]
Length = 770
Score = 28.1 bits (61), Expect = 5.3
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 23/99 (23%)
Query: 28 EPVSLGSLR--GKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQE 85
E +++G+++ G + + +V ++ + ++ GP LV+ G PCN +
Sbjct: 589 ESIAVGTVKHEGNIKYVNDVRNITKKNIEEW----------GPFDLVIGGSPCNDLSNVN 638
Query: 86 NAKNE----------EILNSLKYVRPGGGFE-PNFMLFE 113
A+ E + L Y RP G + P F +FE
Sbjct: 639 PARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMFE 677
>gi|28559061 DNA cytosine-5 methyltransferase 3 beta isoform 2 [Homo
sapiens]
Length = 833
Score = 28.1 bits (61), Expect = 5.3
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 23/99 (23%)
Query: 28 EPVSLGSLR--GKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQE 85
E +++G+++ G + + +V ++ + ++ GP LV+ G PCN +
Sbjct: 589 ESIAVGTVKHEGNIKYVNDVRNITKKNIEEW----------GPFDLVIGGSPCNDLSNVN 638
Query: 86 NAKNE----------EILNSLKYVRPGGGFE-PNFMLFE 113
A+ E + L Y RP G + P F +FE
Sbjct: 639 PARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMFE 677
>gi|5901940 DNA cytosine-5 methyltransferase 3 beta isoform 1 [Homo
sapiens]
Length = 853
Score = 28.1 bits (61), Expect = 5.3
Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 23/99 (23%)
Query: 28 EPVSLGSLR--GKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQE 85
E +++G+++ G + + +V ++ + ++ GP LV+ G PCN +
Sbjct: 609 ESIAVGTVKHEGNIKYVNDVRNITKKNIEEW----------GPFDLVIGGSPCNDLSNVN 658
Query: 86 NAKNE----------EILNSLKYVRPGGGFE-PNFMLFE 113
A+ E + L Y RP G + P F +FE
Sbjct: 659 PARKGLYEGTGRLFFEFYHLLNYSRPKEGDDRPFFWMFE 697
>gi|48314820 5-oxoprolinase (ATP-hydrolysing) [Homo sapiens]
Length = 1288
Score = 28.1 bits (61), Expect = 5.3
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 28 EPVSLGSLRGKV--LLIENVASLUGTTVRDYT------QMNELQRRLG 67
+PV LG+LRGK+ LL + SL + YT Q+ L R LG
Sbjct: 165 QPVDLGALRGKLEGLLSRGIRSLAVVLMHSYTWAQHEQQVGVLARELG 212
>gi|221139804 RNA binding motif protein 24 isoform 3 [Homo sapiens]
Length = 178
Score = 27.7 bits (60), Expect = 7.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 3 AARLAAAAAAAQSVYAFSARPLAGG 27
AA AAAAAAA Y ++A P A G
Sbjct: 104 AAAAAAAAAAAYDQYPYAASPAAAG 128
>gi|23308561 RNA binding motif protein 24 isoform 2 [Homo sapiens]
Length = 191
Score = 27.7 bits (60), Expect = 7.0
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 3 AARLAAAAAAAQSVYAFSARPLAGG 27
AA AAAAAAA Y ++A P A G
Sbjct: 117 AAAAAAAAAAAYDQYPYAASPAAAG 141
>gi|221625538 MORC family CW-type zinc finger 1 [Homo sapiens]
Length = 984
Score = 27.7 bits (60), Expect = 7.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 78 CNQFGHQENAKNEEILNSLKYVR 100
CN+FG+Q + E+ LNS +Y R
Sbjct: 452 CNEFGYQNDIDVEKPLNSFQYQR 474
>gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo
sapiens]
Length = 288
Score = 27.7 bits (60), Expect = 7.0
Identities = 19/31 (61%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 3 AARLAAAAAAA--QSVYAFSARPLAGGEPVS 31
AAR AAA AAA QSV A PLA +PVS
Sbjct: 239 AARAAAAPAAACVQSVAESPATPLAIAQPVS 269
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,136,378
Number of Sequences: 37866
Number of extensions: 377091
Number of successful extensions: 827
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 40
length of query: 203
length of database: 18,247,518
effective HSP length: 97
effective length of query: 106
effective length of database: 14,574,516
effective search space: 1544898696
effective search space used: 1544898696
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.