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Search of human proteins with 39812106
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39812106 tumor differentially expressed protein 1 [Homo
sapiens]
(473 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39812106 tumor differentially expressed protein 1 [Homo sapiens] 957 0.0
gi|5803193 tumor differentially expressed protein 1 [Homo sapiens] 957 0.0
gi|24308213 serine incorporator 1 [Homo sapiens] 555 e-158
gi|71834872 tumor differentially expressed 2-like [Homo sapiens] 471 e-133
gi|30172548 developmentally regulated protein TPO1 [Homo sapiens] 265 9e-71
gi|75677608 serine incorporator 4 [Homo sapiens] 96 7e-20
gi|239750235 PREDICTED: hypothetical protein [Homo sapiens] 37 0.039
gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo ... 37 0.039
gi|148839292 ATPase type 13A3 [Homo sapiens] 34 0.33
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 33 0.73
gi|134268642 killer cell immunoglobulin-like receptor, three dom... 31 2.8
gi|229576906 F-box and WD repeat domain containing 12 isoform 3 ... 30 3.6
gi|229576894 F-box and WD repeat domain containing 12 isoform 2 ... 30 3.6
gi|229576873 F-box and WD repeat domain containing 12 isoform 1 ... 30 3.6
gi|154800443 solute carrier family 17 (sodium phosphate), member... 30 6.2
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 29 8.1
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 29 8.1
gi|4502875 claudin 3 [Homo sapiens] 29 8.1
gi|4885441 solute carrier family 17 (sodium phosphate), member 4... 29 8.1
>gi|39812106 tumor differentially expressed protein 1 [Homo sapiens]
Length = 473
Score = 957 bits (2473), Expect = 0.0
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE 60
MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE
Sbjct: 1 MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE 60
Query: 61 METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK 120
METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK
Sbjct: 61 METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK 120
Query: 121 TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV 180
TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV
Sbjct: 121 TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV 180
Query: 181 DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF 240
DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF
Sbjct: 181 DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF 240
Query: 241 ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM 300
ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM
Sbjct: 241 ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM 300
Query: 301 SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ 360
SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ
Sbjct: 301 SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ 360
Query: 361 VDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLASLYIM 420
VDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLASLYIM
Sbjct: 361 VDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLASLYIM 420
Query: 421 MTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDFS 473
MTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDFS
Sbjct: 421 MTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDFS 473
>gi|5803193 tumor differentially expressed protein 1 [Homo sapiens]
Length = 473
Score = 957 bits (2473), Expect = 0.0
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE 60
MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE
Sbjct: 1 MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE 60
Query: 61 METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK 120
METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK
Sbjct: 61 METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK 120
Query: 121 TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV 180
TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV
Sbjct: 121 TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV 180
Query: 181 DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF 240
DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF
Sbjct: 181 DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF 240
Query: 241 ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM 300
ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM
Sbjct: 241 ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM 300
Query: 301 SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ 360
SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ
Sbjct: 301 SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ 360
Query: 361 VDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLASLYIM 420
VDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLASLYIM
Sbjct: 361 VDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLASLYIM 420
Query: 421 MTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDFS 473
MTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDFS
Sbjct: 421 MTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDFS 473
>gi|24308213 serine incorporator 1 [Homo sapiens]
Length = 453
Score = 555 bits (1429), Expect = e-158
Identities = 279/473 (58%), Positives = 345/473 (72%), Gaps = 22/473 (4%)
Query: 1 MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE 60
MG+VLG+ S+ASW+PCLC A CLLC CCP+ NSTVTRLIYA LL+ V+ +M
Sbjct: 1 MGSVLGLCSMASWIPCLCGSAPCLLCRCCPSGNNSTVTRLIYALFLLVGVCVACVMLIPG 60
Query: 61 METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK 120
ME L KIPGFCE + C++LVGYKAVYR+ F +A+F+ + SLLM KVK
Sbjct: 61 MEEQLNKIPGFCENEKGV--------VPCNILVGYKAVYRLCFGLAMFYLLLSLLMIKVK 112
Query: 121 TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV 180
+S D RAAVHNGFWFFK AA I I++G+F+IP G F++VWF VGM GA FILIQLVLL+
Sbjct: 113 SSSDPRAAVHNGFWFFKFAAAIAIIIGAFFIPEGTFTTVWFYVGMAGAFCFILIQLVLLI 172
Query: 181 DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF 240
DFAHSWNESWV +MEEGN R WYAALLS T+ Y+LS++ + L + YYT P C+ENK F
Sbjct: 173 DFAHSWNESWVEKMEEGNSRCWYAALLSATALNYLLSLVAIVLFFVYYTHPASCSENKAF 232
Query: 241 ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM 300
IS+N++LCV AS++SI PKIQE QPRSGLLQSS+IT+YTMYLTWSAM+NEP+ +CNP+L+
Sbjct: 233 ISVNMLLCVGASVMSILPKIQESQPRSGLLQSSVITVYTMYLTWSAMTNEPETNCNPSLL 292
Query: 301 SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ 360
S I N+T+ VP +S + IGL +F+LC+ YSSIRTS NSQ
Sbjct: 293 SIIGY---------NTTSTVP---KEGQSVQWWHAQGIIGLILFLLCVFYSSIRTSNNSQ 340
Query: 361 VDKLTLSGSDSVILGDTTTSGASDEEDGQP-RRAVDNEKEGVQYSYSLFHLMLCLASLYI 419
V+KLTL+ +S ++ D EDG RAVDNE++GV YSYS FH ML LASLYI
Sbjct: 341 VNKLTLTSDESTLIEDGGARSDGSLEDGDDVHRAVDNERDGVTYSYSFFHFMLFLASLYI 400
Query: 420 MMTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDF 472
MMTLT+WY + + M S+W AVWVKISSSW+ ++LYVWTLVAPLVLT+RDF
Sbjct: 401 MMTLTNWYRYEPS-REMKSQWTAVWVKISSSWIGIVLYVWTLVAPLVLTNRDF 452
>gi|71834872 tumor differentially expressed 2-like [Homo sapiens]
Length = 455
Score = 471 bits (1211), Expect = e-133
Identities = 240/473 (50%), Positives = 314/473 (66%), Gaps = 18/473 (3%)
Query: 1 MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKE 60
MGA LG SL S CLC A C+LCSCCP S+NSTV+RLI+ F L L +VS IM
Sbjct: 1 MGACLGACSLLSCASCLCGSAPCILCSCCPASRNSTVSRLIFTFFLFLGVLVSIIMLSPG 60
Query: 61 METYLKKIPGFCEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVK 120
+E+ L K+P CE G I + DC L+GY+AVYR+ FA A FFF F+LLM V
Sbjct: 61 VESQLYKLPWVCEEGAGIPTV-LQGHIDCGSLLGYRAVYRMCFATAAFFFFFTLLMLCVS 119
Query: 121 TSKDLRAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSSVWFVVGMIGAALFILIQLVLLV 180
+S+D RAA+ NGFWFFK L+G+ VG+FYIP G F+++WF G++G+ LFILIQLVLL+
Sbjct: 120 SSRDPRAAIQNGFWFFKFLILVGLTVGAFYIPDGSFTNIWFYFGVVGSFLFILIQLVLLI 179
Query: 181 DFAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFF 240
DFAHSWN+ W+ + EE + R WYA L FT FY+LSI V L++ YYT+P GC E K F
Sbjct: 180 DFAHSWNQRWLGKAEECDSRAWYAGLFFFTLLFYLLSIAAVALMFMYYTEPSGCHEGKVF 239
Query: 241 ISINLILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLM 300
IS+NL CV SI ++ PK+Q+ QP SGLLQ+S+ITLYTM++TWSA+S+ P++ CNP+L
Sbjct: 240 ISLNLTFCVCVSIAAVLPKVQDAQPNSGLLQASVITLYTMFVTWSALSSIPEQKCNPHLP 299
Query: 301 SFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQ 360
+ + GN T V P D+ + +GL +F+LC L+ S+R+S + Q
Sbjct: 300 TQL----------GNETVVA---GPEGYETQWWDAPSIVGLIIFLLCTLFISLRSSDHRQ 346
Query: 361 VDKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLASLYIM 420
V+ L + +L T +G RA DNE++GV YSYS FH L LASL++M
Sbjct: 347 VNSLMQTEECPPMLDATQQQQQVAACEG---RAFDNEQDGVTYSYSFFHFCLVLASLHVM 403
Query: 421 MTLTSWYSPDAKFQSMTSKWPAVWVKISSSWVCLLLYVWTLVAPLVLTSRDFS 473
MTLT+WY P + + M S W AVWVKI +SW LLLY+WTLVAPL+L +RDFS
Sbjct: 404 MTLTNWYKP-GETRKMISTWTAVWVKICASWAGLLLYLWTLVAPLLLRNRDFS 455
>gi|30172548 developmentally regulated protein TPO1 [Homo sapiens]
Length = 423
Score = 265 bits (676), Expect = 9e-71
Identities = 161/435 (37%), Positives = 230/435 (52%), Gaps = 45/435 (10%)
Query: 11 ASWVPCLCSGASC-LLCSCCPNSKNSTVTRLIYAFILLLSTVVSYIMQRKEMETYLKK-I 68
A + C C A C L C CCP + S TR +YA +L V+ IM + +K+ I
Sbjct: 7 AGQLACCCGSAGCSLCCDCCPRIRQSLSTRFMYALYFILVVVLCCIMMSTTVAHKMKEHI 66
Query: 69 PGF---CEGGFKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDL 125
P F C+G I A C+ LVGY AVYR+ F MA FFF+F LL K+ SK
Sbjct: 67 PFFEDMCKG--------IKAGDTCEKLVGYSAVYRVCFGMACFFFIFCLLTLKINNSKSC 118
Query: 126 RAAVHNGFWFFKIAALIGIMVGSFYIPG-GYFSSVWFVVGMIGAALFILIQLVLLVDFAH 184
RA +HNGFWFFK+ L + G+F+IP F + W VG +G LFI IQL+LLV+FAH
Sbjct: 119 RAHIHNGFWFFKLLLLGAMCSGAFFIPDQDTFLNAWRYVGAVGGFLFIGIQLLLLVEFAH 178
Query: 185 SWNESWVNRMEEGNPRLWYAALLSFTSAFYILSIICVGLLYTYYTKPDGCTENKFFISIN 244
WN++W + +LWYA+L T Y ++ + L+ +YT+ D C ENK + +N
Sbjct: 179 KWNKNWT--AGTASNKLWYASLALVTLIMYSIATGGLVLMAVFYTQKDSCMENKILLGVN 236
Query: 245 LILCVVASIISIHPKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLMSFIT 304
LC++ S+++I P +Q QP SGLLQS +I+ Y YLT+SA+S++P
Sbjct: 237 GGLCLLISLVAISPWVQNRQPHSGLLQSGVISCYVTYLTFSALSSKP------------- 283
Query: 305 RITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFI---GLFVFVLCLLYSSIRTSTNSQV 361
A + + V T P L +N + G + + C+LYS + ++T S
Sbjct: 284 ---AEVVLDEHGKNV--TICVPDFGQDLYRDENLVTILGTSLLIGCILYSCLTSTTRSSS 338
Query: 362 DKL----TLSGSDSVILGDTTTSGASDEEDGQPR----RAVDNEKEGVQYSYSLFHLMLC 413
D L + + G D E+ QP R + +EK+G Y YS FH +
Sbjct: 339 DALQGRYAAPELEIARCCFCFSPGGEDTEEQQPGKEGPRVIYDEKKGTVYIYSYFHFVFF 398
Query: 414 LASLYIMMTLTSWYS 428
LASLY+MMT+T+W++
Sbjct: 399 LASLYVMMTVTNWFN 413
>gi|75677608 serine incorporator 4 [Homo sapiens]
Length = 274
Score = 95.9 bits (237), Expect = 7e-20
Identities = 69/232 (29%), Positives = 105/232 (45%), Gaps = 44/232 (18%)
Query: 258 PKIQEHQPRSGLLQSSLITLYTMYLTWSAMSNEPDRSCNPNLMSFITRITAPTLAPGNST 317
P + QPRSGLLQ+S+I+ Y MYLT+SA+S+ P L N T
Sbjct: 33 PGTRTEQPRSGLLQASVISCYIMYLTFSALSSRPPERV--------------ILQGQNHT 78
Query: 318 AVVP-----TPTPPSKSGSLLDSDNFIGLFVFVLCLLYSSIRTSTNSQV----------- 361
+P P P S ++L + + C+L++ S ++V
Sbjct: 79 LCLPGLSKMEPQTPDISLAMLSAS------IMYACVLFACNEASYLAEVFGPLWIVKVYS 132
Query: 362 -----DKLTLSGSDSVILGDTTTSGASDEEDGQPRRAVDNEKEGVQYSYSLFHLMLCLAS 416
L ++V GA+ D + A + + + Y+YS FH + LAS
Sbjct: 133 YEFQKPSLCFCCPETVEADKGQRGGAARPADQETPPAPPVQVQHLSYNYSAFHFVFFLAS 192
Query: 417 LYIMMTLTSWYSPDAKFQSMT---SKWPAVWVKISSSWVCLLLYVWTLVAPL 465
LY+M+TLT+W+S + T W WVK++S W C+LLY+ L+APL
Sbjct: 193 LYVMVTLTNWFSYEGAELEKTFIKGSWATFWVKVASCWACVLLYLGLLLAPL 244
>gi|239750235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 37.0 bits (84), Expect = 0.039
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 288 SNEPDRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLC 347
S+ P S +P+ S P+ +P +S+ + P P PPS S S S F+ L
Sbjct: 175 SSSPSSSSSPSYSS-------PSSSPSSSSPLPPPPPPPSFSSSSSSSFPFLLLLPLFFL 227
Query: 348 LLYSSIRTSTNS 359
LL SS +ST S
Sbjct: 228 LLLSSFSSSTFS 239
>gi|239744535 PREDICTED: hypothetical protein XP_002343184 [Homo
sapiens]
Length = 257
Score = 37.0 bits (84), Expect = 0.039
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 288 SNEPDRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTPPSKSGSLLDSDNFIGLFVFVLC 347
S+ P S +P+ S P+ +P +S+ + P P PPS S S S F+ L
Sbjct: 175 SSSPSSSSSPSYSS-------PSSSPSSSSPLPPPPPPPSFSSSSSSSFPFLLLLPLFFL 227
Query: 348 LLYSSIRTSTNS 359
LL SS +ST S
Sbjct: 228 LLLSSFSSSTFS 239
>gi|148839292 ATPase type 13A3 [Homo sapiens]
Length = 1226
Score = 33.9 bits (76), Expect = 0.33
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 18/103 (17%)
Query: 126 RAAVHNGFWFFKIAALIGIMVGSFYIPGGYFSS--VWFVVGMIG--AALFILIQLVLLVD 181
RAA+ F FK AL I+ YFS ++ ++ +G LFI + ++L+V
Sbjct: 929 RAALITSFCVFKFMALYSIIQ--------YFSVTLLYSILSNLGDFQFLFIDLAIILVVV 980
Query: 182 FAHSWNESWVNRMEEGNPRLWYAALLSFTSAFYILS--IICVG 222
F S N +W + + P + L+S F +LS IIC+G
Sbjct: 981 FTMSLNPAWKELVAQRPP----SGLISGALLFSVLSQIIICIG 1019
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 32.7 bits (73), Expect = 0.73
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 297 PNLMSFITRITAPTLAPGNSTAVVPTPTP---PSKSGSLLDSDNFIGLFVFVLCLLYSSI 353
P+ +TR + PTL P ++ + P+ TP PS + +L+ S L SS
Sbjct: 184 PSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSR 243
Query: 354 RTSTNSQVDKLTLSGSDSVILGDTTT 379
T T S LT S + ++ T T
Sbjct: 244 PTLTRSSTPTLTPSSTPTLTPSSTPT 269
Score = 32.0 bits (71), Expect = 1.3
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 297 PNLMSFITRITAPTLAPGNSTAVVPTPTP-----------PSKSGSLLDSDNFIGLFVFV 345
P+ +TR + PTL P ++ + P+ TP PS + +L S I
Sbjct: 136 PSSTPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSST 195
Query: 346 LCLLYSSIRTSTNSQVDKLTLSGSDSVILGDTTT 379
L SS T T S LT S + ++I T T
Sbjct: 196 PTLTPSSTPTLTPSSTPTLTPSNTPTLIPSSTPT 229
Score = 30.4 bits (67), Expect = 3.6
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 288 SNEPDRSCNPNLMSFITRITAPTLAPGNSTAVVPTPTP---PSKSGSLLDSDNFIGLFVF 344
SN P + P +T + PTL P N+ + P+ TP PS + +L S
Sbjct: 65 SNTP--TLTPCSTPTLTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSS 122
Query: 345 VLCLLYSSIRTSTNSQVDKLTLSGSDSVILGDTTT 379
L SS T T S LT S + ++ T T
Sbjct: 123 TPTLTPSSTPTLTPSSTPTLTRSSTPTLTPSSTPT 157
>gi|134268642 killer cell immunoglobulin-like receptor, three
domains, long cytoplasmic tail, 2 precursor [Homo
sapiens]
Length = 455
Score = 30.8 bits (68), Expect = 2.8
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 314 GNSTAVVPTPTPP-SKSGSLLDSDNFIG----LFVFVLCLLYSSIRTSTNSQVDKLTLSG 368
GN ++ P+PT P SKSG IG +F+F+L L + R +N K +
Sbjct: 317 GNPSSSWPSPTEPSSKSGICRHLHVLIGTSVVIFLFILLLFFLLYRWCSN----KKNAAV 372
Query: 369 SDSVILGDTTTSGA-SDEEDGQ 389
D GD T + SDE+D Q
Sbjct: 373 MDQEPAGDRTVNRQDSDEQDPQ 394
>gi|229576906 F-box and WD repeat domain containing 12 isoform 3
[Homo sapiens]
Length = 445
Score = 30.4 bits (67), Expect = 3.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 76 FKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFW 134
++I + A C + +G Y I F + +FS+ F ++ +D +AA++N FW
Sbjct: 311 YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINN-FW 368
>gi|229576894 F-box and WD repeat domain containing 12 isoform 2
[Homo sapiens]
Length = 394
Score = 30.4 bits (67), Expect = 3.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 76 FKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFW 134
++I + A C + +G Y I F + +FS+ F ++ +D +AA++N FW
Sbjct: 260 YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINN-FW 317
>gi|229576873 F-box and WD repeat domain containing 12 isoform 1
[Homo sapiens]
Length = 464
Score = 30.4 bits (67), Expect = 3.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 76 FKIHEADINADKDCDVLVGYKAVYRISFAMAIFFFVFSLLMFKVKTSKDLRAAVHNGFW 134
++I + A C + +G Y I F + +FS+ F ++ +D +AA++N FW
Sbjct: 330 YEIASFQVAAHLKCPIWMGASDGYMIVFTSGPYLLLFSITGFLLQRFEDHQAAINN-FW 387
>gi|154800443 solute carrier family 17 (sodium phosphate), member 1
[Homo sapiens]
Length = 467
Score = 29.6 bits (65), Expect = 6.2
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 151 IPGGYFSSVWFVVGMIGAALFILIQLVLLVDFAHSWNESWV 191
+P GYFS ++ MIG AL + L LL+ A +WV
Sbjct: 96 VPVGYFSGIYSTKKMIGFALCLSSVLSLLIPPAAGIGVAWV 136
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 29.3 bits (64), Expect = 8.1
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 297 PNLMSFITRITAPTLAPGNSTAVVPTPTP---PSKSGSLLDSDNFIGLFVFVLCLLYSSI 353
P+ +T PTL P N+ + P+ TP PS + +L S I L SS
Sbjct: 106 PSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPI--------LTRSST 157
Query: 354 RTSTNSQVDKLTLSGSDSVILGDTTT 379
T T S LT S + ++ T T
Sbjct: 158 PTLTPSSRPILTRSSTPTLTPSSTPT 183
Score = 29.3 bits (64), Expect = 8.1
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 297 PNLMSFITRITAPTLAPGNSTAVVPTPTP---PSKSGSLLDSDNFIGLFVFVLCLLYSSI 353
P+ +TR + PTL P ++ + P+ TP PS + +L S I L SS
Sbjct: 162 PSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPI--------LTRSST 213
Query: 354 RTSTNSQVDKLTLSGSDSV 372
T T S LT S + ++
Sbjct: 214 PTLTPSSRPILTPSSTPTL 232
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 29.3 bits (64), Expect = 8.1
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 11/86 (12%)
Query: 297 PNLMSFITRITAPTLAPGNSTAVVPTPTP---PSKSGSLLDSDNFIGLFVFVLCLLYSSI 353
P+ +T PTL P N+ + P+ TP PS + +L S I L SS
Sbjct: 106 PSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSSTPTLTPSSRPI--------LTRSST 157
Query: 354 RTSTNSQVDKLTLSGSDSVILGDTTT 379
T T S LT S + ++ T T
Sbjct: 158 PTLTPSSRPILTRSSTPTLTPSSTPT 183
Score = 29.3 bits (64), Expect = 8.1
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 297 PNLMSFITRITAPTLAPGNSTAVVPTPTP---PSKSGSLLDSDNFIGLFVFVLCLLYSSI 353
P+ +TR + PTL P ++ + P+ TP PS + +L S I L SS
Sbjct: 162 PSSRPILTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPI--------LTRSST 213
Query: 354 RTSTNSQVDKLTLSGSDSV 372
T T S LT S + ++
Sbjct: 214 PTLTPSSRPILTPSSTPTL 232
>gi|4502875 claudin 3 [Homo sapiens]
Length = 220
Score = 29.3 bits (64), Expect = 8.1
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 1 MGAVLGVFSLASWVPCLCSGASCLLCSCCPNSKNSTVTRLIYA 43
MGA L V A+ + L G + L CSC P K T T+++Y+
Sbjct: 159 MGAGLYVGWAAAALQLL--GGALLCCSCPPREKKYTATKVVYS 199
>gi|4885441 solute carrier family 17 (sodium phosphate), member 4
[Homo sapiens]
Length = 497
Score = 29.3 bits (64), Expect = 8.1
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 120 KTSKDLRAAVHNGFWFFKIAALI--GIMVGSFY--IPGGYFSSVWFVVGMIGAALFILIQ 175
+T K+ +A W +I +I + GSF IP GY + ++ ++GA LFI
Sbjct: 91 ETLKEFKAMAPAYDWSPEIQGIILSSLNYGSFLAPIPSGYVAGIFGAKYVVGAGLFISSF 150
Query: 176 LVLLVDFA 183
L L + A
Sbjct: 151 LTLFIPLA 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.137 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,802,798
Number of Sequences: 37866
Number of extensions: 767111
Number of successful extensions: 3727
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3622
Number of HSP's gapped (non-prelim): 72
length of query: 473
length of database: 18,247,518
effective HSP length: 106
effective length of query: 367
effective length of database: 14,233,722
effective search space: 5223775974
effective search space used: 5223775974
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.