Search of human proteins with 38455396

Search of human proteins with 38455396

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38455396 neurogenin 1 [Homo sapiens]
         (237 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38455396 neurogenin 1 [Homo sapiens]                               483   e-137
gi|68989258 neurogenin 3 [Homo sapiens]                               143   1e-34
gi|31077092 neurogenin 2 [Homo sapiens]                               130   1e-30
gi|121114306 neurogenic differentiation 1 [Homo sapiens]               90   2e-18
gi|98986461 neurogenic differentiation 2 [Homo sapiens]                89   3e-18
gi|153792190 neurogenic differentiation 4 [Homo sapiens]               87   1e-17
gi|27475985 neurogenic differentiation 6 [Homo sapiens]                85   5e-17
gi|4885075 atonal homolog 1 [Homo sapiens]                             75   5e-14
gi|57529222 basic helix-loop-helix domain containing, class B, 4...    70   1e-12
gi|30039710 pancreas specific transcription factor, 1a [Homo sap...    70   2e-12
gi|226498192 atonal homolog 8 [Homo sapiens]                           67   1e-11
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi...    67   2e-11
gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo...    64   1e-10
gi|21553337 atonal homolog 7 [Homo sapiens]                            64   1e-10
gi|148922889 scleraxis homolog B [Homo sapiens]                        63   2e-10
gi|186972126 scleraxis homolog A [Homo sapiens]                        63   2e-10
gi|23097242 nephew of atonal 3 [Homo sapiens]                          61   1e-09
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi...    60   1e-09
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]         60   2e-09
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo...    59   4e-09
gi|28411948 oligodendrocyte transcription factor 3 [Homo sapiens]      58   6e-09
gi|116805332 musculin [Homo sapiens]                                   57   2e-08
gi|14149724 mesoderm posterior 1 [Homo sapiens]                        56   3e-08
gi|17981708 twist homolog 2 [Homo sapiens]                             55   5e-08
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H...    55   5e-08
gi|239756681 PREDICTED: basic helix-loop-helix family, member a9...    54   2e-07
gi|239751178 PREDICTED: basic helix-loop-helix family, member a9...    54   2e-07
gi|239745666 PREDICTED: basic helix-loop-helix family, member a9...    54   2e-07
gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]     53   3e-07
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]          53   3e-07

>gi|38455396 neurogenin 1 [Homo sapiens]
          Length = 237

 Score =  483 bits (1244), Expect = e-137
 Identities = 237/237 (100%), Positives = 237/237 (100%)

Query: 1   MPARLETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASE 60
           MPARLETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASE
Sbjct: 1   MPARLETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASE 60

Query: 61  VPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLP 120
           VPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLP
Sbjct: 61  VPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLP 120

Query: 121 SFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGARERLLPPQCVPCLPGPPSPA 180
           SFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGARERLLPPQCVPCLPGPPSPA
Sbjct: 121 SFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGARERLLPPQCVPCLPGPPSPA 180

Query: 181 SDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDPVFSFPSLPKDLLHTTPCFIPYH 237
           SDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDPVFSFPSLPKDLLHTTPCFIPYH
Sbjct: 181 SDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDPVFSFPSLPKDLLHTTPCFIPYH 237


>gi|68989258 neurogenin 3 [Homo sapiens]
          Length = 214

 Score =  143 bits (361), Expect = 1e-34
 Identities = 90/173 (52%), Positives = 103/173 (59%), Gaps = 14/173 (8%)

Query: 42  SGPPAPAR-RGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDR 100
           S PP+P R RG  N + A E        + R RR GR+R +SE  L   RRSRR KANDR
Sbjct: 34  SAPPSPTRTRG--NCAEAEEGGCRGAPRKLRARRGGRSRPKSELALSKQRRSRRKKANDR 91

Query: 101 ERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGA 160
           ERNRMHNLN+ALDALR VLP+FPDD KLTKIETLRFA+NYIWAL +TLR+AD  L     
Sbjct: 92  ERNRMHNLNSALDALRGVLPTFPDDAKLTKIETLRFAHNYIWALTQTLRIADHSL----- 146

Query: 161 RERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLSDPSSPAASEDFTYRPG 213
              L PP   P      SP      WGS     SP+S   S + +     RPG
Sbjct: 147 -YALEPP--APHCGELGSPGGSPGDWGS---LYSPVSQAGSLSPAASLEERPG 193


>gi|31077092 neurogenin 2 [Homo sapiens]
          Length = 272

 Score =  130 bits (327), Expect = 1e-30
 Identities = 88/206 (42%), Positives = 113/206 (54%), Gaps = 23/206 (11%)

Query: 33  ARLQQAASAS-GPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTR-VRSEALLHSLR 90
           AR Q+ A A  G       GA     A  +    D ++   R R  +R  ++   +  ++
Sbjct: 51  ARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVSRGAKTAETVQRIK 110

Query: 91  RSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRL 150
           ++RR+KAN+RERNRMHNLNAALDALR VLP+FP+D KLTKIETLRFA+NYIWAL ETLRL
Sbjct: 111 KTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRL 170

Query: 151 ADQGLPGGGARERLLPPQCVPCLPG-----------PPSPASDAESWGSGAAAASPLSD- 198
           AD    GGG     L  + V   PG            PSPAS      S A ++S  S+ 
Sbjct: 171 ADHCGGGGGGLPGALFSEAVLLSPGGASAALSSSGDSPSPASTWSCTNSPAPSSSVSSNS 230

Query: 199 ---------PSSPAASEDFTYRPGDP 215
                    P+SPA S+   ++P  P
Sbjct: 231 TSPYSCTLSPASPAGSDMDYWQPPPP 256


>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
          Length = 356

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 1/85 (1%)

Query: 65  QDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPD 124
           +DD+Q+ +RR  + +  ++A L   +  RR+KAN RERNRMH LNAALD LR V+P +  
Sbjct: 75  EDDDQKPKRRGPKKKKMTKARLERFKL-RRMKANARERNRMHGLNAALDNLRKVVPCYSK 133

Query: 125 DTKLTKIETLRFAYNYIWALAETLR 149
             KL+KIETLR A NYIWAL+E LR
Sbjct: 134 TQKLSKIETLRLAKNYIWALSEILR 158


>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
          Length = 382

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 56/148 (37%), Positives = 74/148 (50%), Gaps = 25/148 (16%)

Query: 27  TDEEDCARLQQAASASGPPAPARRGAP--------------NISRASEVPGAQDDEQE-- 70
           +D+ D       A   G P PAR   P               +    E+ G +++E+E  
Sbjct: 31  SDKGDAPPPPPPAPGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEE 90

Query: 71  ---------RRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPS 121
                    R ++RG  + +         + RR KAN RERNRMH+LNAALD LR V+P 
Sbjct: 91  EGLDEAEGERPKKRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPC 150

Query: 122 FPDDTKLTKIETLRFAYNYIWALAETLR 149
           +    KL+KIETLR A NYIWAL+E LR
Sbjct: 151 YSKTQKLSKIETLRLAKNYIWALSEILR 178


>gi|153792190 neurogenic differentiation 4 [Homo sapiens]
          Length = 331

 Score = 87.0 bits (214), Expect = 1e-17
 Identities = 67/176 (38%), Positives = 87/176 (49%), Gaps = 18/176 (10%)

Query: 65  QDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPD 124
           ++++ E+ +RRG  + +         R+RRVKAN RER RMH LN ALD LR V+P +  
Sbjct: 60  EEEDGEKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSK 119

Query: 125 DTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGARERLLPPQCVP-------CLP-GP 176
             KL+KIETLR A NYIWAL+E L    Q   G G  E L      P       CL  GP
Sbjct: 120 TQKLSKIETLRLARNYIWALSEVLE-TGQTPEGKGFVEMLCKGLSQPTSNLVAGCLQLGP 178

Query: 177 PSPASDAESWGSGAAAASPLSDPSSPAASEDFTYR-PGDPVFSFPSLPKDLLHTTP 231
            S   +           SP+ D  S  +  +F Y+ PG P   +  +   LLH  P
Sbjct: 179 QSVLLEKHE------DKSPICD--SAISVHNFNYQSPGLPSPPYGHMETHLLHLKP 226


>gi|27475985 neurogenic differentiation 6 [Homo sapiens]
          Length = 337

 Score = 85.1 bits (209), Expect = 5e-17
 Identities = 45/86 (52%), Positives = 57/86 (66%)

Query: 65  QDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPD 124
           ++DE    RRRG  + ++  L     + RR +AN RERNRMH LN ALD LR V+P +  
Sbjct: 67  EEDENGLPRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDALDNLRKVVPCYSK 126

Query: 125 DTKLTKIETLRFAYNYIWALAETLRL 150
             KL+KIETLR A NYIWAL+E LR+
Sbjct: 127 TQKLSKIETLRLAKNYIWALSEILRI 152


>gi|4885075 atonal homolog 1 [Homo sapiens]
          Length = 354

 Score = 75.1 bits (183), Expect = 5e-14
 Identities = 56/145 (38%), Positives = 74/145 (51%), Gaps = 25/145 (17%)

Query: 77  RTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRF 136
           R R  S   ++ +++ RR+ AN RER RMH LN A D LR+V+PSF +D KL+K ETL+ 
Sbjct: 144 RQRAPSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETLQM 203

Query: 137 AYNYIWALAETLRLADQGLPGGGARERLLPPQCVPCLPGPPSPASD------AESWGSGA 190
           A  YI AL+E L+      P GG +    PP      P P S  SD      A S+  GA
Sbjct: 204 AQIYINALSELLQ-----TPSGGEQ----PP------PPPASCKSDHHHLRTAASYEGGA 248

Query: 191 AAASPLSDPSSPAASEDFTYRPGDP 215
             A+      +   S+    RP  P
Sbjct: 249 GNATAAGAQQASGGSQ----RPTPP 269


>gi|57529222 basic helix-loop-helix domain containing, class B, 4
           [Homo sapiens]
          Length = 225

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 51/116 (43%), Positives = 62/116 (53%), Gaps = 18/116 (15%)

Query: 44  PPAPARRGAPNISRAS-EVPGAQDDEQERRRRR--------GRTRVRSEALLHSLRRSRR 94
           P APA R     + +S E  G +DD  E+RRRR        GR R R +       RS R
Sbjct: 50  PAAPAPRAPAQAAESSGEQSGDEDDAFEQRRRRRGPGSAADGRRRPREQ-------RSLR 102

Query: 95  VKANDRERNRMHNLNAALDALRSVLP--SFPDDTKLTKIETLRFAYNYIWALAETL 148
           +  N RER RMH+LN ALD LR+V+P    P   KL+KI TL  A NYI   A+ L
Sbjct: 103 LSINARERRRMHDLNDALDGLRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQAL 158


>gi|30039710 pancreas specific transcription factor, 1a [Homo
           sapiens]
          Length = 328

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 7/110 (6%)

Query: 51  GAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNA 110
           GA  +S  + + G         RRR   RVRSEA L  LR++    AN RER RM ++N 
Sbjct: 128 GAAVLSPGARLRGLSGAAAAAARRR--RRVRSEAELQQLRQA----ANVRERRRMQSIND 181

Query: 111 ALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGLPGGGA 160
           A + LRS +P+ P + +L+K++TLR A  YI  L+E ++ AD  L GGGA
Sbjct: 182 AFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQ-ADLPLRGGGA 230


>gi|226498192 atonal homolog 8 [Homo sapiens]
          Length = 321

 Score = 67.4 bits (163), Expect = 1e-11
 Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 6/111 (5%)

Query: 44  PPAPARRGAPNISRASEV--PGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRE 101
           P  P R G  + S  S V     QD     R+R G     S  +  +L+++RR+ AN RE
Sbjct: 181 PAPPTRPGESSYSSISHVIYNNHQDSSASPRKRPGEATAASSEI-KALQQTRRLLANARE 239

Query: 102 RNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLAD 152
           R R+H ++AA +ALR  +P +    KL+K+  LR A NYI +LA   RLAD
Sbjct: 240 RTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRIACNYILSLA---RLAD 287


>gi|29126247 basic helix-loop-helix family, member a15 [Homo
           sapiens]
          Length = 189

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 49/117 (41%), Positives = 61/117 (52%), Gaps = 11/117 (9%)

Query: 43  GP-PAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRE 101
           GP PA   R  P    A+  PG     + RRRR G +              RR+++N+RE
Sbjct: 34  GPEPAKGLRSRP-ARAAARAPG-----EGRRRRPGPSGPGGR---RDSSIQRRLESNERE 84

Query: 102 RNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAET-LRLADQGLPG 157
           R RMH LN A  ALR V+P    D KL+KIETL  A NYI +L  T L ++   LPG
Sbjct: 85  RQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAKNYIKSLTATILTMSSSRLPG 141


>gi|17978475 oligodendrocyte lineage transcription factor 2 [Homo
           sapiens]
          Length = 323

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 69/236 (29%), Positives = 91/236 (38%), Gaps = 21/236 (8%)

Query: 17  SSGSDLSGFLTDEE---DC-----ARLQQAASASGPPAPARRGAPNISRASEVPGAQDDE 68
           SSGS  +G         DC     A L+ A  ++G     + G      +S    +    
Sbjct: 29  SSGSAFTGGTVSSSTPSDCPPELSAELRGAMGSAGAHPGDKLGGSGFKSSSSSTSSSTSS 88

Query: 69  QERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLP--SFPDDT 126
                 +   +  +E  L  LR    +K N RER RMH+LN A+D LR V+P    P   
Sbjct: 89  AAASSTKKDKKQMTEPELQQLR----LKINSRERKRMHDLNIAMDGLREVMPYAHGPSVR 144

Query: 127 KLTKIETLRFAYNYIWALAETL----RLADQGLPGGGARERLLPPQCVPCLPGPPSPASD 182
           KL+KI TL  A NYI  L  +L    RL  +    GG      P  C       P PA+ 
Sbjct: 145 KLSKIATLLLARNYILMLTNSLEEMKRLVSEIY--GGHHAGFHPSACGGLAHSAPLPAAT 202

Query: 183 AESWGSGAAAASP-LSDPSSPAASEDFTYRPGDPVFSFPSLPKDLLHTTPCFIPYH 237
           A    +  AA  P +  P  P A+            S  SLP   L +     P H
Sbjct: 203 AHPAAAAHAAHHPAVHHPILPPAAAAAAAAAAAAAVSSASLPGSGLPSVGSIRPPH 258


>gi|21553337 atonal homolog 7 [Homo sapiens]
          Length = 152

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 17/117 (14%)

Query: 37  QAASASGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVK 96
           ++   SGPPA AR  AP  +  +E  G            G  R+ S A        RR+ 
Sbjct: 2   KSCKPSGPPAGARV-APPCAGGTECAGTC---------AGAGRLESAA-------RRRLA 44

Query: 97  ANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQ 153
           AN RER RM  LN A D LR V+P +  D KL+K ETL+ A +YI AL   L  A++
Sbjct: 45  ANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAER 101


>gi|148922889 scleraxis homolog B [Homo sapiens]
          Length = 201

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 60/188 (31%), Positives = 78/188 (41%), Gaps = 45/188 (23%)

Query: 9   ISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASEVPGAQDDE 68
           +S L      GSD SG  +DE+ C          G    ARR A         PG +   
Sbjct: 19  VSPLSEDEDRGSDSSG--SDEKPCRVHAARCGLQG----ARRRAGGRRAGGGGPGGRPGR 72

Query: 69  QERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKL 128
           + R+R                       AN RER+R +++N A  ALR+++P+ P D KL
Sbjct: 73  EPRQRHT---------------------ANARERDRTNSVNTAFTALRTLIPTEPADRKL 111

Query: 129 TKIETLRFAYNYIWALAETLRLADQGLPGG-----------GARERLLPPQCVPCLPGPP 177
           +KIETLR A +YI  L   L LA +    G            AR    PP      P PP
Sbjct: 112 SKIETLRLASSYISHLGNVL-LAGEACGDGQPCHSGPAFFHAARAGSPPP------PPPP 164

Query: 178 SPASDAES 185
            PA D E+
Sbjct: 165 PPARDGEN 172


>gi|186972126 scleraxis homolog A [Homo sapiens]
          Length = 201

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 60/188 (31%), Positives = 78/188 (41%), Gaps = 45/188 (23%)

Query: 9   ISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASEVPGAQDDE 68
           +S L      GSD SG  +DE+ C          G    ARR A         PG +   
Sbjct: 19  VSPLSEDEDRGSDSSG--SDEKPCRVHAARCGLQG----ARRRAGGRRAGGGGPGGRPGR 72

Query: 69  QERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKL 128
           + R+R                       AN RER+R +++N A  ALR+++P+ P D KL
Sbjct: 73  EPRQRHT---------------------ANARERDRTNSVNTAFTALRTLIPTEPADRKL 111

Query: 129 TKIETLRFAYNYIWALAETLRLADQGLPGG-----------GARERLLPPQCVPCLPGPP 177
           +KIETLR A +YI  L   L LA +    G            AR    PP      P PP
Sbjct: 112 SKIETLRLASSYISHLGNVL-LAGEACGDGQPCHSGPAFFHAARAGSPPP------PPPP 164

Query: 178 SPASDAES 185
            PA D E+
Sbjct: 165 PPARDGEN 172


>gi|23097242 nephew of atonal 3 [Homo sapiens]
          Length = 166

 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 5/154 (3%)

Query: 5   LETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPAR-----RGAPNISRAS 59
           ++T + D     S  S     L D      L   A A     P R      G P      
Sbjct: 9   VDTTVLDFVADLSLASPRRPLLCDFAPGVSLGDPALALREGRPRRMARFEEGDPEEEECE 68

Query: 60  EVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVL 119
              G  ++E+E  R RG + +        +  ++R  AN RER RM NLN A D LR  +
Sbjct: 69  VDQGDGEEEEEEERGRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKV 128

Query: 120 PSFPDDTKLTKIETLRFAYNYIWALAETLRLADQ 153
           P+F  + +L++IETLR A  YI  + E L   ++
Sbjct: 129 PTFAYEKRLSRIETLRLAIVYISFMTELLESCEK 162


>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
           sapiens]
          Length = 280

 Score = 60.5 bits (145), Expect = 1e-09
 Identities = 50/129 (38%), Positives = 58/129 (44%), Gaps = 19/129 (14%)

Query: 92  SRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLA 151
           +RRV  N RER R  N+N A   LR +LP+ P D KL+K E LR A  YI  L   LR  
Sbjct: 150 ARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLRDQ 209

Query: 152 DQGLPGG----GARERLLPPQCVPCLPGPPSPASDAESWGSG----AAAASPLSDPSSPA 203
              L  G    G R+R  P   VP          D    GSG    AAA S  + P+ P 
Sbjct: 210 AAALAAGPTPPGPRKR--PVHRVP---------DDGARRGSGRRAEAAARSQPAPPADPD 258

Query: 204 ASEDFTYRP 212
            S     RP
Sbjct: 259 GSPGGAARP 267


>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
          Length = 193

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 59/171 (34%), Positives = 75/171 (43%), Gaps = 22/171 (12%)

Query: 42  SGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRE 101
           S PPAP     P    A   P + +  +  RRRR  T           RR      N+RE
Sbjct: 9   SAPPAPP---VPVGCAARRRPASPELLRCSRRRRPATAETGGGAAAVARR------NERE 59

Query: 102 RNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLAD---QGLPGG 158
           RNR+  +N    ALR  +P      KL+K+ETLR A  YI AL   L   D     L GG
Sbjct: 60  RNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALAGG 119

Query: 159 GARERLLPPQCV-PCLP-GPP--SPASDAESWGSGAAAASPLSDPSSPAAS 205
                 L PQ V P  P GPP  +P + + S  S +      S+P SP ++
Sbjct: 120 ------LRPQAVRPSAPRGPPGTTPVAASPSRASSSPGRGGSSEPGSPRSA 164


>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
           sapiens]
          Length = 199

 Score = 58.9 bits (141), Expect = 4e-09
 Identities = 34/67 (50%), Positives = 44/67 (65%), Gaps = 3/67 (4%)

Query: 93  RRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRL-- 150
           +R  AN RER+R  ++N A  ALR+++P+ P D KL+KIETLR A +YI  LA  L L  
Sbjct: 73  QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGD 132

Query: 151 -ADQGLP 156
            AD G P
Sbjct: 133 SADDGQP 139


>gi|28411948 oligodendrocyte transcription factor 3 [Homo sapiens]
          Length = 272

 Score = 58.2 bits (139), Expect = 6e-09
 Identities = 62/197 (31%), Positives = 79/197 (40%), Gaps = 32/197 (16%)

Query: 56  SRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLR------------RSRRVKANDRERN 103
           SR + V   Q D  ++      +R  ++A   S +            +  R+K N RER 
Sbjct: 35  SRLNSVSSTQGDMMQKMPGESLSRAGAKAAGESSKYKIKKQLSEQDLQQLRLKINGRERK 94

Query: 104 RMHNLNAALDALRSVLP--SFPDDTKLTKIETLRFAYNYIWALAETLRLADQ--GLPGGG 159
           RMH+LN A+D LR V+P    P   KL+KI TL  A NYI  L  +L    +  G   GG
Sbjct: 95  RMHDLNLAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGG 154

Query: 160 ARERLLPPQCVPCLPGPPSPASDAESWG----------SGAAAASPLSDPSSPAASEDFT 209
                    C         PA  A S            S   A+SPLS  S PA     T
Sbjct: 155 HHSAF---HCGTVGHSAGHPAHAANSVHPVHPILGGALSSGNASSPLSAASLPAIG---T 208

Query: 210 YRPGDPVFSFPSLPKDL 226
            RP   +   PS P  L
Sbjct: 209 IRPPHSLLKAPSTPPAL 225


>gi|116805332 musculin [Homo sapiens]
          Length = 206

 Score = 56.6 bits (135), Expect = 2e-08
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 15/140 (10%)

Query: 10  SDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASEVPGAQDDEQ 69
           S  D +S+   D  G   +EE CA L  A SA G     +R  P ++      G+     
Sbjct: 40  SPSDNSSAEEEDPDG---EEERCA-LGTAGSAEG----CKRKRPRVAGGGGAGGSAGGG- 90

Query: 70  ERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLT 129
                 G+  + ++      ++S+R  AN RER RM  L+ A   L++ LP  P DTKL+
Sbjct: 91  ------GKKPLPAKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLS 144

Query: 130 KIETLRFAYNYIWALAETLR 149
           K++TLR A +YI  L + L+
Sbjct: 145 KLDTLRLASSYIAHLRQLLQ 164


>gi|14149724 mesoderm posterior 1 [Homo sapiens]
          Length = 268

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 73/241 (30%), Positives = 92/241 (38%), Gaps = 47/241 (19%)

Query: 29  EEDCARLQQAASASGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHS 88
           ++DC R   ++  S    PA     + +R    PG   D   R    GR   RS  L   
Sbjct: 29  DKDCGRSLVSSPDSWGSTPADSPVASPAR----PGTLRDP--RAPSVGRRGARSSRLGSG 82

Query: 89  LRRSRRVKANDRERNRMHNLNAALDALRSVLPSF--PDDTKLTKIETLRFAYNYIWALAE 146
            R+S    A++RE+ RM  L  AL  LR  LP    P    LTKIETLR A  YI  L+ 
Sbjct: 83  QRQS----ASEREKLRMRTLARALHELRRFLPPSVAPAGQSLTKIETLRLAIRYIGHLSA 138

Query: 147 TLRLADQGL-----PGGGARERLLPPQCVPCLPGPPSPASDAE----------------- 184
            L L+++ L       G A      P C    P      + AE                 
Sbjct: 139 VLGLSEESLQRRCRQRGDAGSPRGCPLCPDDCPAQMQTRTQAEGQGQGRGLGLVSAVRAG 198

Query: 185 -SWGS-----GAAAASPLSDP----SSPAASEDFTYRPGDPVFSFPSLPKDLLHTTPCFI 234
            SWGS     GA AA    DP    +  A  E     P  P    P LP D+L     ++
Sbjct: 199 ASWGSPPACPGARAAPEPRDPPALFAEAACPEGQAMEPSPP---SPLLPGDVLALLETWM 255

Query: 235 P 235
           P
Sbjct: 256 P 256


>gi|17981708 twist homolog 2 [Homo sapiens]
          Length = 160

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 27/116 (23%)

Query: 34  RLQQAASASGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSR 93
           R  + +S  G P P +RG          P AQ  E+                     +S+
Sbjct: 34  RYSKKSSEDGSPTPGKRGKKGS------PSAQSFEE--------------------LQSQ 67

Query: 94  RVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLR 149
           R+ AN RER R  +LN A  ALR ++P+ P D KL+KI+TL+ A  YI  L + L+
Sbjct: 68  RILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQ 122


>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
           sapiens]
          Length = 217

 Score = 55.1 bits (131), Expect = 5e-08
 Identities = 29/61 (47%), Positives = 39/61 (63%)

Query: 93  RRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLAD 152
           RR  AN +ER R  ++N+A   LR  +P+ P DTKL+KI+TLR A +YI  L + L   D
Sbjct: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159

Query: 153 Q 153
           Q
Sbjct: 160 Q 160


>gi|239756681 PREDICTED: basic helix-loop-helix family, member a9
           [Homo sapiens]
          Length = 203

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 53/189 (28%), Positives = 75/189 (39%), Gaps = 30/189 (15%)

Query: 36  QQAASASGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRV 95
           + +A   G P P   G   +  A+    ++ + +E   RR    VRS+A        RR+
Sbjct: 17  EDSAEDLGGPCPEPGGDSGVLGANGASCSRGEAEEPAGRRRARPVRSKA--------RRM 68

Query: 96  KANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGL 155
            AN RER R+ + N A +ALR  L       +L+KI TLR A + I AL+  LR +    
Sbjct: 69  AANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSLVLRAS---- 124

Query: 156 PGGGARERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDP 215
                             P P  P    E  G  A   +  +  S P  +     RP   
Sbjct: 125 ------------------PAPRGPCGHLECHGPAARGDTGDTGASPPPPAGPSLARPDAA 166

Query: 216 VFSFPSLPK 224
             S PS P+
Sbjct: 167 RPSVPSAPR 175


>gi|239751178 PREDICTED: basic helix-loop-helix family, member a9
           [Homo sapiens]
          Length = 235

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 53/189 (28%), Positives = 75/189 (39%), Gaps = 30/189 (15%)

Query: 36  QQAASASGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRV 95
           + +A   G P P   G   +  A+    ++ + +E   RR    VRS+A        RR+
Sbjct: 17  EDSAEDLGGPCPEPGGDSGVLGANGASCSRGEAEEPAGRRRARPVRSKA--------RRM 68

Query: 96  KANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGL 155
            AN RER R+ + N A +ALR  L       +L+KI TLR A + I AL+  LR +    
Sbjct: 69  AANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSLVLRAS---- 124

Query: 156 PGGGARERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDP 215
                             P P  P    E  G  A   +  +  S P  +     RP   
Sbjct: 125 ------------------PAPRGPCGHLECHGPAARGDTGDTGASPPPPAGPSLARPDAA 166

Query: 216 VFSFPSLPK 224
             S PS P+
Sbjct: 167 RPSVPSAPR 175


>gi|239745666 PREDICTED: basic helix-loop-helix family, member a9
           [Homo sapiens]
          Length = 235

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 53/189 (28%), Positives = 75/189 (39%), Gaps = 30/189 (15%)

Query: 36  QQAASASGPPAPARRGAPNISRASEVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRV 95
           + +A   G P P   G   +  A+    ++ + +E   RR    VRS+A        RR+
Sbjct: 17  EDSAEDLGGPCPEPGGDSGVLGANGASCSRGEAEEPAGRRRARPVRSKA--------RRM 68

Query: 96  KANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLADQGL 155
            AN RER R+ + N A +ALR  L       +L+KI TLR A + I AL+  LR +    
Sbjct: 69  AANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSLVLRAS---- 124

Query: 156 PGGGARERLLPPQCVPCLPGPPSPASDAESWGSGAAAASPLSDPSSPAASEDFTYRPGDP 215
                             P P  P    E  G  A   +  +  S P  +     RP   
Sbjct: 125 ------------------PAPRGPCGHLECHGPAARGDTGDTGASPPPPAGPSLARPDAA 166

Query: 216 VFSFPSLPK 224
             S PS P+
Sbjct: 167 RPSVPSAPR 175


>gi|237757328 oligodendrocyte transcription factor 1 [Homo sapiens]
          Length = 271

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 51/161 (31%), Positives = 71/161 (44%), Gaps = 27/161 (16%)

Query: 15  ASSSGSDLSGFLTDEEDCARLQQAASASGPPAPARRGAPNISRASEVPG-AQDDEQERRR 73
           +SSS +  +   +     A L   A+   P APA    P     +   G A+ D +E ++
Sbjct: 44  SSSSSTSSTSSTSSSSTTAPLLPKAAREKPEAPAEPPGPGPGSGAHPGGSARPDAKEEQQ 103

Query: 74  RRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVLPSF-------PDDT 126
           ++             LRR    K N RER RM +LN A+DALR V+  +           
Sbjct: 104 QQ-------------LRR----KINSRERKRMQDLNLAMDALREVILPYSAAHCQGAPGR 146

Query: 127 KLTKIETLRFAYNYIWALAETLRLADQGL--PGGGARERLL 165
           KL+KI TL  A NYI  L  +L+   + L    G A  RLL
Sbjct: 147 KLSKIATLLLARNYILLLGSSLQELRRALGEGAGPAAPRLL 187


>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
          Length = 108

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 92  SRRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETL--- 148
           +R++  N RER R  N+N+A   LR ++P+ P D KL+K ETLR A  YI  L + L   
Sbjct: 2   TRKIFTNTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQ 61

Query: 149 RLADQGLPGGGARERLLPPQCVPCLPG 175
            L   G+   G    L P    P LPG
Sbjct: 62  SLQQTGVAAQGNILGLFPQG--PHLPG 86


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,363,629
Number of Sequences: 37866
Number of extensions: 633896
Number of successful extensions: 6440
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 5703
Number of HSP's gapped (non-prelim): 927
length of query: 237
length of database: 18,247,518
effective HSP length: 99
effective length of query: 138
effective length of database: 14,498,784
effective search space: 2000832192
effective search space used: 2000832192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.