BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38348264 olfactomedin-like 1 [Homo sapiens]
(402 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38348264 olfactomedin-like 1 [Homo sapiens] 821 0.0
gi|9910270 olfactomedin-like 3 [Homo sapiens] 239 2e-63
gi|17136143 olfactomedin related ER localized protein isoform 1 ... 130 2e-30
gi|17157993 olfactomedin 2 [Homo sapiens] 127 2e-29
gi|116014339 olfactomedin-like 2A [Homo sapiens] 119 4e-27
gi|4557779 myocilin [Homo sapiens] 117 1e-26
gi|6912464 latrophilin 2 precursor [Homo sapiens] 117 2e-26
gi|163792198 latrophilin 3 precursor [Homo sapiens] 117 2e-26
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens] 115 5e-26
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens] 115 5e-26
gi|46195719 olfactomedin-like 2B [Homo sapiens] 115 5e-26
gi|166706897 olfactomedin 3 [Homo sapiens] 114 2e-25
gi|32313593 olfactomedin 4 precursor [Homo sapiens] 86 6e-17
gi|98986321 gliomedin [Homo sapiens] 84 2e-16
gi|140560917 myomesin 1 isoform b [Homo sapiens] 33 0.46
gi|140560919 myomesin 1 isoform a [Homo sapiens] 33 0.46
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa... 32 1.3
gi|75677351 suppressor of defective silencing 3 [Homo sapiens] 31 1.7
gi|66730421 ATPase type 13A5 [Homo sapiens] 31 1.7
gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo ... 30 3.9
gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo ... 30 3.9
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 30 3.9
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 30 3.9
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 30 3.9
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 30 3.9
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 30 3.9
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 30 3.9
gi|115527097 CDC42-binding protein kinase beta [Homo sapiens] 30 3.9
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 30 3.9
gi|13899233 tetratricopeptide repeat domain 25 [Homo sapiens] 30 3.9
>gi|38348264 olfactomedin-like 1 [Homo sapiens]
Length = 402
Score = 821 bits (2120), Expect = 0.0
Identities = 402/402 (100%), Positives = 402/402 (100%)
Query: 1 MMVALRGASALLVLFLAAFLPPPQCTQDPAMVHYIYQRFRVLEQGLEKCTQATRAYIQEF 60
MMVALRGASALLVLFLAAFLPPPQCTQDPAMVHYIYQRFRVLEQGLEKCTQATRAYIQEF
Sbjct: 1 MMVALRGASALLVLFLAAFLPPPQCTQDPAMVHYIYQRFRVLEQGLEKCTQATRAYIQEF 60
Query: 61 QEFSKNISVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLREADECIVSEDKTLA 120
QEFSKNISVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLREADECIVSEDKTLA
Sbjct: 61 QEFSKNISVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLREADECIVSEDKTLA 120
Query: 121 EMLLQEAEEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIG 180
EMLLQEAEEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIG
Sbjct: 121 EMLLQEAEEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIG 180
Query: 181 SRNNTVWEFANIRAFMEDNTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYN 240
SRNNTVWEFANIRAFMEDNTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYN
Sbjct: 181 SRNNTVWEFANIRAFMEDNTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYN 240
Query: 241 LQKRTVEDRMLLPGGVGRALVYQHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPG 300
LQKRTVEDRMLLPGGVGRALVYQHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPG
Sbjct: 241 LQKRTVEDRMLLPGGVGRALVYQHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPG 300
Query: 301 TLGVEHSWDTPCRSQDAEASFLLCGVLYVVYSTGGQGPHRITCIYDPLGTISEEDLPNLF 360
TLGVEHSWDTPCRSQDAEASFLLCGVLYVVYSTGGQGPHRITCIYDPLGTISEEDLPNLF
Sbjct: 301 TLGVEHSWDTPCRSQDAEASFLLCGVLYVVYSTGGQGPHRITCIYDPLGTISEEDLPNLF 360
Query: 361 FPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKLQTKRKLPLK 402
FPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKLQTKRKLPLK
Sbjct: 361 FPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKLQTKRKLPLK 402
>gi|9910270 olfactomedin-like 3 [Homo sapiens]
Length = 406
Score = 239 bits (611), Expect = 2e-63
Identities = 130/402 (32%), Positives = 218/402 (54%), Gaps = 14/402 (3%)
Query: 8 ASALLVLFLAAFLPPPQCTQDPAMVHYIYQRFRVLEQGLEKCTQATRAYIQEFQEFSKNI 67
++ LL+LFL ++ P Q Q +V Y+ +R LE+ L +C + + E ++F +
Sbjct: 4 STPLLILFLLSWSGPLQ-GQQHHLVEYMERRLAALEERLAQCQDQSSRHAAELRDFKNKM 62
Query: 68 SVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLREADECIVSEDKTLAEMLLQEA 127
+L + ++ ++ RV+R +RE+DY++ A C+ ++K +
Sbjct: 63 LPLLEVAEKEREALRTEADTISGRVDRLEREVDYLETQNPALPCVEFDEKVTGGP-GTKG 121
Query: 128 EEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIGSRNNTVW 187
+ + + + C + ++S+KI+K+ G W KD + + K+Y+L G++N+T +
Sbjct: 122 KGRRNEKYDMVTDCGYTISQVRSMKILKRFGGPAGLWTKDPLGQTEKIYVLDGTQNDTAF 181
Query: 188 EFANIRAFMEDNTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSN-----------EI 236
F +R F + + W GTGQ++Y GFL+F + ++
Sbjct: 182 VFPRLRDFTLAMAARKASRVRVPFPWVGTGQLVYGGFLYFARRPPGRPGGGGEMENTLQL 241
Query: 237 IKYNLQKRTVEDRMLLPGGVGRALVYQHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTK 296
IK++L RTV D + P G Y + TYIDLA DE GLWA+++ HL L K
Sbjct: 242 IKFHLANRTVVDSSVFP-AEGLIPPYGLTADTYIDLAADEEGLWAVYATREDDRHLCLAK 300
Query: 297 IEPGTLGVEHSWDTPCRSQDAEASFLLCGVLYVVYSTGGQGPHRITCIYDPLGTISEEDL 356
++P TL E WDTPC ++AEA+F++CG LYVVY+T RI C +D GT++ E
Sbjct: 301 LDPQTLDTEQQWDTPCPRENAEAAFVICGTLYVVYNTRPASRARIQCSFDASGTLTPERA 360
Query: 357 PNLFFPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKLQTKRK 398
+FP+R +H+ + YNPR++QLYAW++G QI+YKL+ ++K
Sbjct: 361 ALPYFPRRYGAHASLRYNPRERQLYAWDDGYQIVYKLEMRKK 402
>gi|17136143 olfactomedin related ER localized protein isoform 1
[Homo sapiens]
Length = 467
Score = 130 bits (327), Expect = 2e-30
Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 41/365 (11%)
Query: 34 YIYQRFRVLEQGLEKCTQATRAYIQEFQEFSKNISVMLGRCQTYTSEYKSAVGNLALRVE 93
++ ++F+ ++ +++ R I +E+ + ++L ++K V NL +
Sbjct: 128 HLARQFKAIKAKMDEL----RPLIPVLEEYKADAKLVL--------QFKEEVQNLTSVLN 175
Query: 94 RAQREIDYIQYLREADECIVSEDKTLAEMLLQEAEEEKKIRTLLNASCDNMLMGIKSLKI 153
Q EI Y E+ + + E+++R + L GI
Sbjct: 176 ELQEEIGAYDY---------------DELQSRVSNLEERLRACMQKLACGKLTGISDPVT 220
Query: 154 VKKMMDTHGSWMKD--AVYNSPKVYLLIGSRNNT-VWEFANIRAFMEDNTKPAPRKQILT 210
VK GSWM D A +V+ + G NN V E+ ++ FM + + R L
Sbjct: 221 VKTSGSRFGSWMTDPLAPEGDNRVWYMDGYHNNRFVREYKSMVDFMNTDNFTSHR---LP 277
Query: 211 LSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQKRTV-EDRMLLPGGVGRALVYQHSPSTY 269
W GTGQV+Y G ++F N+ S+ II+++L+ T+ + R L G Y +
Sbjct: 278 HPWSGTGQVVYNGSIYF-NKFQSHIIIRFDLKTETILKTRSLDYAGYNNMYHYAWGGHSD 336
Query: 270 IDLAVDEHGLWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEASFLLCGVLYV 329
IDL VDE GLWA+++ ++V+++++P +L +W+T + A +F++CG LYV
Sbjct: 337 IDLMVDESGLWAVYATNQNAGNIVVSRLDPVSLQTLQTWNTSYPKRSAGEAFIICGTLYV 396
Query: 330 VYSTGGQGPHRITCIYDP-LGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQLYAWNEGNQ 388
+ G G ++ Y T D+P F + SM+ YNP+D+ LYAWN G+Q
Sbjct: 397 --TNGYSGGTKVHYAYQTNASTYEYIDIP---FQNKYSHISMLDYNPKDRALYAWNNGHQ 451
Query: 389 IIYKL 393
I+Y +
Sbjct: 452 ILYNV 456
>gi|17157993 olfactomedin 2 [Homo sapiens]
Length = 454
Score = 127 bits (319), Expect = 2e-29
Identities = 81/253 (32%), Positives = 130/253 (51%), Gaps = 12/253 (4%)
Query: 145 LMGIKSLKIVKKMMDTHGSWMKDAVYNSP--KVYLLIGS-RNNTVWEFANIRAFMEDNTK 201
L G+ + V+ M GSWM D + S +V+ + G + V EF + F++
Sbjct: 198 LTGVSNPITVRAMGSRFGSWMTDTMAPSADSRVWYMDGYYKGRRVLEFRTLGDFIKGQNF 257
Query: 202 PAPRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQKRTVEDRMLLPG-GVGRAL 260
+ +L W GTG V+Y G LF+ N+ SN ++KY+ + R+V + LPG G
Sbjct: 258 I---QHLLPQPWAGTGHVVYNGSLFY-NKYQSNVVVKYHFRSRSVLVQRSLPGAGYNNTF 313
Query: 261 VYQHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEAS 320
Y + +D VDE GLWA+++ ++V+++++P TL V SWDT + A +
Sbjct: 314 PYSWGGFSDMDFMVDESGLWAVYTTNQNAGNIVVSRLDPHTLEVMRSWDTGYPKRSAGEA 373
Query: 321 FLLCGVLYVVYSTGGQGPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQL 380
F++CGVLYV S G + + D+P F + SM+ YNPR++ L
Sbjct: 374 FMICGVLYVTNSHLA-GAKVYFAYFTNTSSYEYTDVP---FHNQYSHISMLDYNPRERAL 429
Query: 381 YAWNEGNQIIYKL 393
Y WN G+Q++Y +
Sbjct: 430 YTWNNGHQVLYNV 442
>gi|116014339 olfactomedin-like 2A [Homo sapiens]
Length = 652
Score = 119 bits (299), Expect = 4e-27
Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 17/264 (6%)
Query: 139 ASCDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIGSRNNTVWEFANIRAFMED 198
ASC+ L + G+WMKD ++Y+ N++ EF N+ F +
Sbjct: 393 ASCEGTLRAVDPPVRHHSYGRHEGAWMKDPAARDDRIYVTNYYYGNSLVEFRNLENFKQG 452
Query: 199 NTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQKRTVEDRMLLPGGVGR 258
+ L +W GTG V+Y+G F++N+A + IIKY+L++R V LLP V
Sbjct: 453 RWSNMYK---LPYNWIGTGHVVYQG-AFYYNRAFTKNIIKYDLRQRFVASWALLPDVVYE 508
Query: 259 ALV-YQHSPSTYIDLAVDEHGLWAIHSGPGTHSH-----LVLTKIEPGTLGV--EHSWDT 310
++ + ID AVDE GLW I+ +VL++++PG L V E +W T
Sbjct: 509 DTTPWKWRGHSDIDFAVDESGLWVIYPAVDDRDEAQPEVIVLSRLDPGDLSVHRETTWKT 568
Query: 311 PCRSQDAEASFLLCGVLYVVYSTGGQGPHRITCIYDP-LGTISEEDLPNLFFPKRPRSHS 369
R FL+CG+LY V T Q ++ +D GT + LP F +
Sbjct: 569 RLRRNSYGNCFLVCGILYAV-DTYNQQEGQVAYAFDTHTGTDARPQLP---FLNEHAYTT 624
Query: 370 MIHYNPRDKQLYAWNEGNQIIYKL 393
I YNP+++ LYAW+ G+Q+ Y L
Sbjct: 625 QIDYNPKERVLYAWDNGHQLTYTL 648
>gi|4557779 myocilin [Homo sapiens]
Length = 504
Score = 117 bits (294), Expect = 1e-26
Identities = 81/255 (31%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 150 SLKIVKKMMDTHGSWMKDAV----YNSPKVYLL--IGSRNNTVWEFANIRAFMEDNTKPA 203
+L+ + + +G WM+D Y + + +G+ V+E+ I FM+
Sbjct: 256 TLRTAETITGKYGVWMRDPKPTYPYTQETTWRIDTVGTDVRQVFEYDLISQFMQGYPS-- 313
Query: 204 PRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQKRTVEDRMLLPG-GVGRALVY 262
+ IL + TG V+Y G L+F A S +I+Y L TV+ +PG G Y
Sbjct: 314 -KVHILPRPLESTGAVVYSGSLYFQG-AESRTVIRYELNTETVKAEKEIPGAGYHGQFPY 371
Query: 263 QHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEASFL 322
T IDLAVDE GLW I+S +VL+K+ P L +E +W+T R Q +F+
Sbjct: 372 SWGGYTDIDLAVDEAGLWVIYSTDEAKGAIVLSKLNPENLELEQTWETNIRKQSVANAFI 431
Query: 323 LCGVLYVVYSTGGQGPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQLYA 382
+CG LY V S+ + YD GT + L + F R + SMI YNP +K+L+A
Sbjct: 432 ICGTLYTV-SSYTSADATVNFAYD-TGTGISKTL-TIPFKNRYKYSSMIDYNPLEKKLFA 488
Query: 383 WNEGNQIIYKLQTKR 397
W+ N + Y ++ +
Sbjct: 489 WDNLNMVTYDIKLSK 503
>gi|6912464 latrophilin 2 precursor [Homo sapiens]
Length = 1403
Score = 117 bits (293), Expect = 2e-26
Identities = 77/262 (29%), Positives = 130/262 (49%), Gaps = 14/262 (5%)
Query: 141 CDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIGS--RNNTVWEFANIRAFMED 198
C L I + + G+W KD + + K+Y + + R +T+ E+A++ F
Sbjct: 136 CPGTLKAIVDSPCIYEAEQKAGAWCKDPLQAADKIYFMPWTPYRTDTLIEYASLEDFQNS 195
Query: 199 NTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQKRTVEDRMLLP-GGVG 257
+ L GTG V+Y G +FF+ + T N I+K++L+ R ++
Sbjct: 196 RQTTTYK---LPNRVDGTGFVVYDGAVFFNKERTRN-IVKFDLRTRIKSGEAIINYANYH 251
Query: 258 RALVYQHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDA 317
Y+ T IDLAVDE+GLW I++ + +V++++ P TL E +W+T + A
Sbjct: 252 DTSPYRWGGKTDIDLAVDENGLWVIYATEQNNGMIVISQLNPYTLRFEATWETVYDKRAA 311
Query: 318 EASFLLCGVLYVVYST-----GGQGPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIH 372
+F++CGVLYVV S G + I IY+ ++ + ++ FP + + + +
Sbjct: 312 SNAFMICGVLYVVRSVYQDNESETGKNSIDYIYNT--RLNRGEYVDVPFPNQYQYIAAVD 369
Query: 373 YNPRDKQLYAWNEGNQIIYKLQ 394
YNPRD QLY WN + Y L+
Sbjct: 370 YNPRDNQLYVWNNNFILRYSLE 391
>gi|163792198 latrophilin 3 precursor [Homo sapiens]
Length = 1469
Score = 117 bits (292), Expect = 2e-26
Identities = 77/261 (29%), Positives = 133/261 (50%), Gaps = 14/261 (5%)
Query: 141 CDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIGS--RNNTVWEFANIRAFMED 198
C +L G+ + + + G+W KD + S K+Y + + R +T+ E+++ F+
Sbjct: 135 CPGLLKGVYQSEHLFESDHQSGAWCKDPLQASDKIYYMPWTPYRTDTLTEYSSKDDFIAG 194
Query: 199 NTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQKRTVEDRMLLPGG-VG 257
+ L GTG V+Y G LFF+ + T N I+K++L+ R ++
Sbjct: 195 RPTTTYK---LPHRVDGTGFVVYDGALFFNKERTRN-IVKFDLRTRIKSGEAIIANANYH 250
Query: 258 RALVYQHSPSTYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDA 317
Y+ + IDLAVDE+GLW I++ + +V++++ P TL +E +WDT + A
Sbjct: 251 DTSPYRWGGKSDIDLAVDENGLWVIYATEQNNGKIVISQLNPYTLRIEGTWDTAYDKRSA 310
Query: 318 EASFLLCGVLYVVYST-----GGQGPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIH 372
+F++CG+LYVV S ++I IY+ S++ L ++ FP + + +
Sbjct: 311 SNAFMICGILYVVKSVYEDDDNEATGNKIDYIYNT--DQSKDSLVDVPFPNSYQYIAAVD 368
Query: 373 YNPRDKQLYAWNEGNQIIYKL 393
YNPRD LY WN + + Y L
Sbjct: 369 YNPRDNLLYVWNNYHVVKYSL 389
>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
Length = 1474
Score = 115 bits (289), Expect = 5e-26
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 14/241 (5%)
Query: 162 GSWMKDAVYNSPKVYLL--IGSRNNTVWEFANIRAFMEDNTKPAPRKQILTLSWQGTGQV 219
G+W KD + ++Y++ I R +T+ E+A+ ++ R L GTG V
Sbjct: 161 GAWCKDPLQAGDRIYVMPWIPYRTDTLTEYASWEDYVAARHTTTYR---LPNRVDGTGFV 217
Query: 220 IYKGFLFFHNQATSNEIIKYNLQKRTVEDRMLL-PGGVGRALVYQHSPSTYIDLAVDEHG 278
+Y G +F++ + T N I+KY+L+ R ++ Y+ T IDLAVDE+G
Sbjct: 218 VYDGAVFYNKERTRN-IVKYDLRTRIKSGETVINTANYHDTSPYRWGGKTDIDLAVDENG 276
Query: 279 LWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEASFLLCGVLYVVYST----- 333
LW I++ G + LV++++ P TL E +W+T + A +F++CGVLYV+ S
Sbjct: 277 LWVIYATEGNNGRLVVSQLNPYTLRFEGTWETGYDKRSASNAFMVCGVLYVLRSVYVDDD 336
Query: 334 GGQGPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKL 393
+R+ ++ + E+ +L FP + S + YNPRD QLY WN + Y L
Sbjct: 337 SEAAGNRVDYAFNT--NANREEPVSLTFPNPYQFISSVDYNPRDNQLYVWNNYFVVRYSL 394
Query: 394 Q 394
+
Sbjct: 395 E 395
>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
Length = 1469
Score = 115 bits (289), Expect = 5e-26
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 14/241 (5%)
Query: 162 GSWMKDAVYNSPKVYLL--IGSRNNTVWEFANIRAFMEDNTKPAPRKQILTLSWQGTGQV 219
G+W KD + ++Y++ I R +T+ E+A+ ++ R L GTG V
Sbjct: 156 GAWCKDPLQAGDRIYVMPWIPYRTDTLTEYASWEDYVAARHTTTYR---LPNRVDGTGFV 212
Query: 220 IYKGFLFFHNQATSNEIIKYNLQKRTVEDRMLL-PGGVGRALVYQHSPSTYIDLAVDEHG 278
+Y G +F++ + T N I+KY+L+ R ++ Y+ T IDLAVDE+G
Sbjct: 213 VYDGAVFYNKERTRN-IVKYDLRTRIKSGETVINTANYHDTSPYRWGGKTDIDLAVDENG 271
Query: 279 LWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEASFLLCGVLYVVYST----- 333
LW I++ G + LV++++ P TL E +W+T + A +F++CGVLYV+ S
Sbjct: 272 LWVIYATEGNNGRLVVSQLNPYTLRFEGTWETGYDKRSASNAFMVCGVLYVLRSVYVDDD 331
Query: 334 GGQGPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKL 393
+R+ ++ + E+ +L FP + S + YNPRD QLY WN + Y L
Sbjct: 332 SEAAGNRVDYAFNT--NANREEPVSLTFPNPYQFISSVDYNPRDNQLYVWNNYFVVRYSL 389
Query: 394 Q 394
+
Sbjct: 390 E 390
>gi|46195719 olfactomedin-like 2B [Homo sapiens]
Length = 750
Score = 115 bits (289), Expect = 5e-26
Identities = 84/271 (30%), Positives = 130/271 (47%), Gaps = 15/271 (5%)
Query: 128 EEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMKDAVYNSPKVYLLIGSRNNTVW 187
EEE IR ++ C + L I G+WMKD + ++Y+ NT+
Sbjct: 482 EEEDDIRNVIGR-CKDTLSTITGPTTQNTYGRNEGAWMKDPLAKDERIYVTNYYYGNTLV 540
Query: 188 EFANIRAFMEDNTKPAPRKQILTLSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQKRTVE 247
EF N+ F + + + L SW GTG V+Y G F++N+A + IIKY+L++R V
Sbjct: 541 EFRNLENFKQGRWSNSYK---LPYSWIGTGHVVYNG-AFYYNRAFTRNIIKYDLKQRYVA 596
Query: 248 D-RMLLPGGVGRALVYQHSPSTYIDLAVDEHGLWAIHSGPGTHSH----LVLTKIEPGTL 302
ML A ++ + +D AVDE+GLW I+ +VL+K+ L
Sbjct: 597 AWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWLIYPALDDEGFSQEVIVLSKLNAADL 656
Query: 303 GV--EHSWDTPCRSQDAEASFLLCGVLYVVYSTGGQGPHRITCIYDPLGTISEEDLPNLF 360
E +W T R F++CGVLY V S + + I+ +D + + +P L
Sbjct: 657 STQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQRNAN-ISYAFDT--HTNTQIVPRLL 713
Query: 361 FPKRPRSHSMIHYNPRDKQLYAWNEGNQIIY 391
F + I YNP+D+ LYAW+ G+Q+ Y
Sbjct: 714 FENEYSYTTQIDYNPKDRLLYAWDNGHQVTY 744
>gi|166706897 olfactomedin 3 [Homo sapiens]
Length = 458
Score = 114 bits (284), Expect = 2e-25
Identities = 101/368 (27%), Positives = 161/368 (43%), Gaps = 40/368 (10%)
Query: 38 RFRVLEQGLEKCTQATRAYIQEFQEFSKNISVMLGRCQTYTSE------YKSAVGNLALR 91
+FR +E ++ T T+ + QE +E + ++ + Y ++ +K + NL+
Sbjct: 107 KFRQIED--DRKTLMTK-HFQELKEKMDELLPLIPVLEQYKTDAKLITQFKEEIRNLSAV 163
Query: 92 VERAQREIDYIQYLREADECIVSEDKTLAEMLLQEAEEEKKIRTLLNASCDNMLMGIKSL 151
+ Q EI Y E+ + E ++R + LM I
Sbjct: 164 LTGIQEEIGAYDY---------------EELHQRVLSLETRLRDCMKKLTCGKLMKITGP 208
Query: 152 KIVKKMMDTHGSWMKDAVY---NSPKVYLLIGSRNNTVWEFANIRAFMEDNTKPAPRKQI 208
VK G+WM D + N+ Y+ + N V E+ +I F+ R
Sbjct: 209 VTVKTSGTRFGAWMTDPLASEKNNRVWYMDSYTNNKIVREYKSIADFVSGAES---RTYN 265
Query: 209 LTLSWQGTGQVIYKGFLFFHNQATSNEIIKYNLQK-RTVEDRMLLPGGVGRALVYQHSPS 267
L W GT V+Y G L+F N+ SN IIKY+ R + R L G Y
Sbjct: 266 LPFKWAGTNHVVYNGSLYF-NKYQSNIIIKYSFDMGRVLAQRSLEYAGFHNVYPYTWGGF 324
Query: 268 TYIDLAVDEHGLWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEASFLLCGVL 327
+ IDL DE GLWA+++ ++V++++ TL V SW T + A SF++CG L
Sbjct: 325 SDIDLMADEIGLWAVYATNQNAGNIVISQLNQDTLEVMKSWSTGYPKRSAGESFMICGTL 384
Query: 328 YVVYS--TGGQGPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQLYAWNE 385
YV S TG + + + T D+P F + SM+ YN RD+ LYAWN
Sbjct: 385 YVTNSHLTGAKVYYSYS---TKTSTYEYTDIP---FHNQYFHISMLDYNARDRALYAWNN 438
Query: 386 GNQIIYKL 393
G+Q+++ +
Sbjct: 439 GHQVLFNV 446
>gi|32313593 olfactomedin 4 precursor [Homo sapiens]
Length = 510
Score = 85.9 bits (211), Expect = 6e-17
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 8/242 (3%)
Query: 161 HGSWMKDAVYNSPKVYLLIGSRNNT---VWEFANIRAFMEDNTKPAPRKQILTLSWQGTG 217
+G+W +D P L + NT + E+ + ++D +++ QG+G
Sbjct: 271 YGAWGRDYSPQHPNKGLYWVAPLNTDGRLLEYYRLYNTLDDLLLYINARELRITYGQGSG 330
Query: 218 QVIYKGFLFFHNQATSNEIIKYNLQKRTVEDRMLLPGGV-GRALVYQHSPSTYIDLAVDE 276
+Y ++ + T N I + NL T+ LP Y + ID AVDE
Sbjct: 331 TAVYNNNMYVNMYNTGN-IARVNLTTNTIAVTQTLPNAAYNNRFSYANVAWQDIDFAVDE 389
Query: 277 HGLWAIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEASFLLCGVLYVVYSTGGQ 336
+GLW I+S + ++V++K+ TL V ++W T A +F++CGVLY T
Sbjct: 390 NGLWVIYSTEASTGNMVISKLNDTTLQVLNTWYTKQYKPSASNAFMVCGVLYAT-RTMNT 448
Query: 337 GPHRITCIYDPLGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKLQTK 396
I YD +E ++ K I+YNP D++LY +N+G + Y L
Sbjct: 449 RTEEIFYYYDT--NTGKEGKLDIVMHKMQEKVQSINYNPFDQKLYVYNDGYLLNYDLSVL 506
Query: 397 RK 398
+K
Sbjct: 507 QK 508
>gi|98986321 gliomedin [Homo sapiens]
Length = 551
Score = 84.0 bits (206), Expect = 2e-16
Identities = 69/294 (23%), Positives = 130/294 (44%), Gaps = 32/294 (10%)
Query: 109 DECIVSEDKTLAEMLLQEAEEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMKDA 168
+ C + D TL ++A E + ++M+ I + V K+ +T G+W++++
Sbjct: 274 ETCAIPNDDTLVGKADEKASEHH------SPQAESMITSIGNPVQVLKVTETFGTWIRES 327
Query: 169 VYNSPKVYLLIGSRNNTVWEFANIRAFMEDNTKPAPRKQI-------LTLSWQGTGQVIY 221
S ++ +W + M K P L + G G V+Y
Sbjct: 328 ANKS----------DDRIWVTEHFSGIMVKEFKDQPSLLNGSYTFIHLPYYFHGCGHVVY 377
Query: 222 KGFLFFHNQATSNEIIKYNLQKRTVEDRMLLPG-GVGRALVYQHSPSTYIDLAVDEHGLW 280
L++H + SN ++++ + T + L R ++ +S TY +LAVDE GLW
Sbjct: 378 NNSLYYH-KGGSNTLVRFEFGQETSQTLKLENALYFDRKYLFANS-KTYFNLAVDEKGLW 435
Query: 281 AIHSGPGTHSHLVLTKIEPGTLGVEHSWDTPCRSQDAEASFLLCGVLYVVYSTGGQGPHR 340
I++ S +++ +++ T V +T A +F+ G+LYV + R
Sbjct: 436 IIYASSVDGSSILVAQLDERTFSVVQHVNTTYPKSKAGNAFIARGILYVTDTK----DMR 491
Query: 341 ITCIYDPLGTISEEDLPNLFFPKRPRSHSMIHYNPRDKQLYAWNEGNQIIYKLQ 394
+T +D LG ++ N +M+ YN RD+ LY+W +G+ ++Y +Q
Sbjct: 492 VTFAFDLLG--GKQINANFDLRTSQSVLAMLAYNMRDQHLYSWEDGHLMLYPVQ 543
>gi|140560917 myomesin 1 isoform b [Homo sapiens]
Length = 1589
Score = 33.1 bits (74), Expect = 0.46
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 47 EKCTQATRAYIQEFQEFSKNISVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLR 106
E+ + AYI + + + + T + + ++ + A + A ++ +
Sbjct: 156 EERIKEAAAYIAQRNLLASEEGITTSKQSTASKQTTASKQSTASKQSTASKQSTASRQST 215
Query: 107 EADECIVSEDKTLAEMLLQEAEEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMK 166
+ + +VS+ T A L QE EKK R ++ L K+L+ + H +
Sbjct: 216 ASRQSVVSKQATSA--LQQEETSEKKSRKVVIREKAERLSLRKTLEETETY---HAKLNE 270
Query: 167 DAVYNSPKVYLLIGSRNNTVWEFANIRAFMEDNTKPAPR 205
D + ++P+ +I R++TVWE N++ P PR
Sbjct: 271 DHLLHAPE--FIIKPRSHTVWEKENVKLHCSIAGWPEPR 307
>gi|140560919 myomesin 1 isoform a [Homo sapiens]
Length = 1685
Score = 33.1 bits (74), Expect = 0.46
Identities = 34/159 (21%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 47 EKCTQATRAYIQEFQEFSKNISVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLR 106
E+ + AYI + + + + T + + ++ + A + A ++ +
Sbjct: 156 EERIKEAAAYIAQRNLLASEEGITTSKQSTASKQTTASKQSTASKQSTASKQSTASRQST 215
Query: 107 EADECIVSEDKTLAEMLLQEAEEEKKIRTLLNASCDNMLMGIKSLKIVKKMMDTHGSWMK 166
+ + +VS+ T A L QE EKK R ++ L K+L+ + H +
Sbjct: 216 ASRQSVVSKQATSA--LQQEETSEKKSRKVVIREKAERLSLRKTLEETETY---HAKLNE 270
Query: 167 DAVYNSPKVYLLIGSRNNTVWEFANIRAFMEDNTKPAPR 205
D + ++P+ +I R++TVWE N++ P PR
Sbjct: 271 DHLLHAPE--FIIKPRSHTVWEKENVKLHCSIAGWPEPR 307
>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
sapiens]
Length = 1819
Score = 31.6 bits (70), Expect = 1.3
Identities = 20/82 (24%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 57 IQEFQEFSKNISVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLREADECIVS-- 114
++E +E K+ +V +GR + + LR+E A++E+ I + REA ++S
Sbjct: 630 LEELKEIEKDCAVYVGRMERVARHSSVSKEEKELRMEIAKQEL--IAHAREAASRVLSAL 687
Query: 115 EDKTLAEMLLQEAEEEKKIRTL 136
D+ ++E + +A + ++ + L
Sbjct: 688 SDRQMSERMALDARKREQFQRL 709
>gi|75677351 suppressor of defective silencing 3 [Homo sapiens]
Length = 328
Score = 31.2 bits (69), Expect = 1.7
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 16/106 (15%)
Query: 31 MVHYIYQ-RFRVLEQGLEKCTQATRAYIQEFQEFSKNISVMLGRCQTYTSEYKSAVGN-- 87
M +YQ + L++ L++ + T +QE+Q+ K + +YK + N
Sbjct: 68 MKEQMYQDKLASLKRQLQQLQEGT---LQEYQKRMKKLD----------QQYKERIRNAE 114
Query: 88 LALRVERAQREIDYIQYLREADECIVSEDKTLAEMLLQEAEEEKKI 133
L L++E Q E +YI+ + A + + L E L+ E EE+KK+
Sbjct: 115 LFLQLETEQVERNYIKEKKAAVKEFEDKKVELKENLIAELEEKKKM 160
>gi|66730421 ATPase type 13A5 [Homo sapiens]
Length = 1218
Score = 31.2 bits (69), Expect = 1.7
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 8/137 (5%)
Query: 228 HNQATSNEIIKYNLQKRTVEDRMLLPGGVGRALVYQHSPSTYIDLAVDEHGLWAIHSGPG 287
HN+ I+K + +E R+L+PG + L+ S D AV G ++ G
Sbjct: 259 HNKVQVTIIVK-DKGLEELESRLLVPGDI---LILPGKFSLPCD-AVLIDGSCVVNEGML 313
Query: 288 THSHLVLTKIEPGTLGVEHSWDTPCRS-QDAEASFLLCGVLYVVYSTGGQGPHRITCIYD 346
T + +TK + E++ C S +D L CG + GQGP R +
Sbjct: 314 TGESIPVTKTPLPQM--ENTMPWKCHSLEDYRKHVLFCGTEVIQVKPSGQGPVRAVVLQT 371
Query: 347 PLGTISEEDLPNLFFPK 363
T + + ++ +P+
Sbjct: 372 GYNTAKGDLVRSILYPR 388
>gi|27262624 ATP-binding cassette, sub-family A , member 5 [Homo
sapiens]
Length = 1642
Score = 30.0 bits (66), Expect = 3.9
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 15/98 (15%)
Query: 20 LPPPQCTQDPAMVHYIYQRFRVLEQGLEKCTQATRAYIQEFQEFSKNISVMLG---RCQT 76
L P DP ++++ R + ++ T Y++E + +++M+ RC
Sbjct: 1456 LDEPSTGMDPKAKQHMWRAIRTAFKNRKRAAILTTHYMEEAEAVCDRVAIMVSGQLRCIG 1515
Query: 77 YTSEYKSAVGN------------LALRVERAQREIDYI 102
KS G L V+R QREI YI
Sbjct: 1516 TVQHLKSKFGKGYFLEIKLKDWIENLEVDRLQREIQYI 1553
>gi|27262626 ATP-binding cassette, sub-family A , member 5 [Homo
sapiens]
Length = 1642
Score = 30.0 bits (66), Expect = 3.9
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 15/98 (15%)
Query: 20 LPPPQCTQDPAMVHYIYQRFRVLEQGLEKCTQATRAYIQEFQEFSKNISVMLG---RCQT 76
L P DP ++++ R + ++ T Y++E + +++M+ RC
Sbjct: 1456 LDEPSTGMDPKAKQHMWRAIRTAFKNRKRAAILTTHYMEEAEAVCDRVAIMVSGQLRCIG 1515
Query: 77 YTSEYKSAVGN------------LALRVERAQREIDYI 102
KS G L V+R QREI YI
Sbjct: 1516 TVQHLKSKFGKGYFLEIKLKDWIENLEVDRLQREIQYI 1553
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 30.0 bits (66), Expect = 3.9
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 22/194 (11%)
Query: 78 TSEYKSAVGNLALRVERAQREIDYIQYLREADECIVSEDKT------------LAEMLLQ 125
T E K + +L ++ E A E+ ++ + +E IV E K E+ +
Sbjct: 526 TEELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMC 585
Query: 126 EAEEEKKIRTLLNASCDNMLMGIK-SLKIVKKMMDTHGSWMKDAVYNSPKVYLLIGSRNN 184
E E EKK R + + K +L I + + S + + V K + + +
Sbjct: 586 EMEREKKGRKVTEMEGQAKELSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHE 645
Query: 185 TVW--------EFANIRAFMEDNTKPAPRKQILTLSWQGTGQVIYK-GFLFFHNQATSNE 235
E N++A + + KP +Q+ + Q +G++ K L NQ E
Sbjct: 646 KSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKE 705
Query: 236 IIKYNLQKRTVEDR 249
I K L + ++++
Sbjct: 706 IEKVYLDNKLLKEQ 719
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 30.0 bits (66), Expect = 3.9
Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 22/194 (11%)
Query: 78 TSEYKSAVGNLALRVERAQREIDYIQYLREADECIVSEDKT------------LAEMLLQ 125
T E K + +L ++ E A E+ ++ + +E IV E K E+ +
Sbjct: 539 TEELKDQLKDLKVKYEGASAEVGKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMC 598
Query: 126 EAEEEKKIRTLLNASCDNMLMGIK-SLKIVKKMMDTHGSWMKDAVYNSPKVYLLIGSRNN 184
E E EKK R + + K +L I + + S + + V K + + +
Sbjct: 599 EMEREKKGRKVTEMEGQAKELSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHE 658
Query: 185 TVW--------EFANIRAFMEDNTKPAPRKQILTLSWQGTGQVIYK-GFLFFHNQATSNE 235
E N++A + + KP +Q+ + Q +G++ K L NQ E
Sbjct: 659 KSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKKITELTLKNQTLQKE 718
Query: 236 IIKYNLQKRTVEDR 249
I K L + ++++
Sbjct: 719 IEKVYLDNKLLKEQ 732
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 30.0 bits (66), Expect = 3.9
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 79 SEYKSAVGNLALRVERAQREIDYIQYLRE---ADECIVSEDKTLAEMLLQEAEEEKKIRT 135
S++KS + L ++ + + +++ Q RE A + + +DK L E+LLQ E+E+K+
Sbjct: 1810 SKFKSTIAALEAKIAQLEEQVE--QEAREKQAATKSLKQKDKKLKEILLQ-VEDERKMAE 1866
Query: 136 LLNASCDNMLMGIKSLK 152
+ +K LK
Sbjct: 1867 QYKEQAEKGNARVKQLK 1883
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 30.0 bits (66), Expect = 3.9
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 79 SEYKSAVGNLALRVERAQREIDYIQYLRE---ADECIVSEDKTLAEMLLQEAEEEKKIRT 135
S++KS + L ++ + + +++ Q RE A + + +DK L E+LLQ E+E+K+
Sbjct: 1817 SKFKSTIAALEAKIAQLEEQVE--QEAREKQAATKSLKQKDKKLKEILLQ-VEDERKMAE 1873
Query: 136 LLNASCDNMLMGIKSLK 152
+ +K LK
Sbjct: 1874 QYKEQAEKGNARVKQLK 1890
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 30.0 bits (66), Expect = 3.9
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 79 SEYKSAVGNLALRVERAQREIDYIQYLRE---ADECIVSEDKTLAEMLLQEAEEEKKIRT 135
S++KS + L ++ + + +++ Q RE A + + +DK L E+LLQ E+E+K+
Sbjct: 1817 SKFKSTIAALEAKIAQLEEQVE--QEAREKQAATKSLKQKDKKLKEILLQ-VEDERKMAE 1873
Query: 136 LLNASCDNMLMGIKSLK 152
+ +K LK
Sbjct: 1874 QYKEQAEKGNARVKQLK 1890
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 30.0 bits (66), Expect = 3.9
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 79 SEYKSAVGNLALRVERAQREIDYIQYLRE---ADECIVSEDKTLAEMLLQEAEEEKKIRT 135
S++KS + L ++ + + +++ Q RE A + + +DK L E+LLQ E+E+K+
Sbjct: 1810 SKFKSTIAALEAKIAQLEEQVE--QEAREKQAATKSLKQKDKKLKEILLQ-VEDERKMAE 1866
Query: 136 LLNASCDNMLMGIKSLK 152
+ +K LK
Sbjct: 1867 QYKEQAEKGNARVKQLK 1883
>gi|115527097 CDC42-binding protein kinase beta [Homo sapiens]
Length = 1711
Score = 30.0 bits (66), Expect = 3.9
Identities = 22/117 (18%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Query: 37 QRFRVLEQGLEKCTQATRAYIQEFQEFSKNISVMLGRCQTYTSEYKSAVGNLALRVERAQ 96
+R + + L+ Q + +QEF E ++ ++ + + Q + + + + E A
Sbjct: 554 ERLKSQAKELKDAHQQRKLALQEFSELNERMAELRAQKQKVSRQLRDKEEEM----EVAT 609
Query: 97 REIDYIQYLREADECIVSEDKTLAEMLLQEAEEEKKIRTLLNASCDNMLMGIKSLKI 153
+++D ++ E + E + + + EA +E+K+R C M +++LK+
Sbjct: 610 QKVDAMRQEMRRAEKLRKELEAQLDDAVAEASKERKLREHSENFCKQMESELEALKV 666
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 30.0 bits (66), Expect = 3.9
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 177 LLIGSRNNTVWEFANIRAFMEDNTKPAPRKQILTLS 212
LL +N TV E A+ +AF + P+P++Q L+ S
Sbjct: 34 LLPSDQNTTVQEDAHFKAFFQSEDSPSPKRQRLSHS 69
>gi|13899233 tetratricopeptide repeat domain 25 [Homo sapiens]
Length = 672
Score = 30.0 bits (66), Expect = 3.9
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 62 EFSKNISVMLGRCQTYTSEYKSAVGNLALRVERAQREIDYIQYLREADECIVSEDKTLAE 121
E+ N SV++ + Q +++SAV N +ERA+ + + EA + I+S +
Sbjct: 434 EWQLNASVLVAQAQVKLRDFESAVNNFEKALERAK-----LVHNNEAQQAIISALDDANK 488
Query: 122 MLLQEAEEEKKIRTLLNAS 140
+++E + + L S
Sbjct: 489 GIIRELRKTNYVENLKEKS 507
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,347,883
Number of Sequences: 37866
Number of extensions: 746328
Number of successful extensions: 1722
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1660
Number of HSP's gapped (non-prelim): 49
length of query: 402
length of database: 18,247,518
effective HSP length: 105
effective length of query: 297
effective length of database: 14,271,588
effective search space: 4238661636
effective search space used: 4238661636
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.