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Search of human proteins with 37594444
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37594444 zinc finger, MYND domain-containing 10 [Homo
sapiens]
(440 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens] 899 0.0
gi|28872803 myeloid translocation gene on chromosome 16 isoform ... 49 9e-06
gi|28872805 myeloid translocation gene on chromosome 16 isoform ... 49 9e-06
gi|28329422 acute myelogenous leukemia 1 translocation 1 protein... 49 1e-05
gi|28329419 acute myelogenous leukemia 1 translocation 1 protein... 49 1e-05
gi|28329416 acute myelogenous leukemia 1 translocation 1 protein... 49 1e-05
gi|4757916 acute myelogenous leukemia 1 translocation 1 protein ... 49 1e-05
gi|13489073 egl nine homolog 1 [Homo sapiens] 44 3e-04
gi|89353295 core-binding factor, runt domain, alpha subunit 2; t... 41 0.002
gi|74229008 core-binding factor, runt domain, alpha subunit 2; t... 41 0.002
gi|4826663 core-binding factor, runt domain, alpha subunit 2; tr... 41 0.002
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 41 0.002
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 41 0.002
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 41 0.002
gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo sa... 40 0.003
gi|67782303 zinc finger, MYND domain containing 17 [Homo sapiens] 40 0.003
gi|38505161 tudor domain containing 1 [Homo sapiens] 40 0.005
gi|38016945 deformed epidermal autoregulatory factor 1 [Homo sap... 39 0.012
gi|239749940 PREDICTED: similar to deformed epidermal autoregula... 39 0.012
gi|57529246 ubiquitin thioesterase 19 [Homo sapiens] 38 0.021
gi|188035871 SET and MYND domain containing 2 [Homo sapiens] 38 0.021
gi|238814389 zinc finger, MYND domain containing 11 isoform a [H... 35 0.10
gi|238814385 zinc finger, MYND domain containing 11 isoform a [H... 35 0.10
gi|21735594 programmed cell death 2 isoform 2 [Homo sapiens] 35 0.18
gi|21735592 programmed cell death 2 isoform 1 [Homo sapiens] 35 0.18
gi|19923997 zinc finger, MYND domain containing 19 [Homo sapiens] 35 0.18
gi|12232401 SET and MYND domain containing 3 [Homo sapiens] 34 0.23
gi|116268103 zinc finger, FYVE domain containing 19 [Homo sapiens] 33 0.39
gi|38093643 SET and MYND domain containing 1 [Homo sapiens] 31 2.0
gi|31657140 insulin receptor-related receptor precursor [Homo sa... 31 2.6
>gi|37594444 zinc finger, MYND domain-containing 10 [Homo sapiens]
Length = 440
Score = 899 bits (2322), Expect = 0.0
Identities = 440/440 (100%), Positives = 440/440 (100%)
Query: 1 MGDLELLLPGEAEVLVRGLRSFPLREMGSEGWNQQHENLEKLNMQAILDATVSQGEPIQE 60
MGDLELLLPGEAEVLVRGLRSFPLREMGSEGWNQQHENLEKLNMQAILDATVSQGEPIQE
Sbjct: 1 MGDLELLLPGEAEVLVRGLRSFPLREMGSEGWNQQHENLEKLNMQAILDATVSQGEPIQE 60
Query: 61 LLVTHGKVPTLVEELIAVEMWKQKVFPVFCRVEDFKPQNTFPIYMVVHHEASIINLLETV 120
LLVTHGKVPTLVEELIAVEMWKQKVFPVFCRVEDFKPQNTFPIYMVVHHEASIINLLETV
Sbjct: 61 LLVTHGKVPTLVEELIAVEMWKQKVFPVFCRVEDFKPQNTFPIYMVVHHEASIINLLETV 120
Query: 121 FFHKEVCESAEDTVLDLVDYCHRKLTLLVAQSGCGGPPEGEGSQDSNPMQELQKQAELME 180
FFHKEVCESAEDTVLDLVDYCHRKLTLLVAQSGCGGPPEGEGSQDSNPMQELQKQAELME
Sbjct: 121 FFHKEVCESAEDTVLDLVDYCHRKLTLLVAQSGCGGPPEGEGSQDSNPMQELQKQAELME 180
Query: 181 FEIALKALSVLRYITDCVDSLSLSTLSRMLSTHNLPCLLVELLEHSPWSRREGGKLQQFE 240
FEIALKALSVLRYITDCVDSLSLSTLSRMLSTHNLPCLLVELLEHSPWSRREGGKLQQFE
Sbjct: 181 FEIALKALSVLRYITDCVDSLSLSTLSRMLSTHNLPCLLVELLEHSPWSRREGGKLQQFE 240
Query: 241 GSRWHTVAPSEQQKLSKLDGQVWIALYNLLLSPEAQARYCLTSFAKGRLLKLRAFLTDTL 300
GSRWHTVAPSEQQKLSKLDGQVWIALYNLLLSPEAQARYCLTSFAKGRLLKLRAFLTDTL
Sbjct: 241 GSRWHTVAPSEQQKLSKLDGQVWIALYNLLLSPEAQARYCLTSFAKGRLLKLRAFLTDTL 300
Query: 301 LDQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHV 360
LDQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHV
Sbjct: 301 LDQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWERLERENRGKWQAIAKHQLQHV 360
Query: 361 FSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQV 420
FSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQV
Sbjct: 361 FSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQV 420
Query: 421 KHWEKHGKTCVLAAQGDRAK 440
KHWEKHGKTCVLAAQGDRAK
Sbjct: 421 KHWEKHGKTCVLAAQGDRAK 440
>gi|28872803 myeloid translocation gene on chromosome 16 isoform
MTG16a [Homo sapiens]
Length = 653
Score = 48.9 bits (115), Expect = 9e-06
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 334 IPE-IWERLERE-NRGKWQAIAKHQLQHVFSPSEQDLR--------------LQARRWAE 377
+PE IW + E N K QA++ +LQ S +E+ +A+R A
Sbjct: 482 VPEDIWRKAEEAVNEVKRQAMS--ELQKAVSDAERKAHELITTERAKMERALAEAKRQAS 539
Query: 378 TYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQGD 437
L V+ C C +AS+ CS C YC CQ + WEKH C + QG
Sbjct: 540 EDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGP 599
Query: 438 RA 439
A
Sbjct: 600 TA 601
>gi|28872805 myeloid translocation gene on chromosome 16 isoform
MTG16b [Homo sapiens]
Length = 567
Score = 48.9 bits (115), Expect = 9e-06
Identities = 37/122 (30%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 334 IPE-IWERLERE-NRGKWQAIAKHQLQHVFSPSEQDLR--------------LQARRWAE 377
+PE IW + E N K QA++ +LQ S +E+ +A+R A
Sbjct: 396 VPEDIWRKAEEAVNEVKRQAMS--ELQKAVSDAERKAHELITTERAKMERALAEAKRQAS 453
Query: 378 TYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTCVLAAQGD 437
L V+ C C +AS+ CS C YC CQ + WEKH C + QG
Sbjct: 454 EDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGP 513
Query: 438 RA 439
A
Sbjct: 514 TA 515
>gi|28329422 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 48.5 bits (114), Expect = 1e-05
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 336 EIWERLERE-NRGKWQAIAKHQLQHVFSPSEQDLR--------------LQARRWAETYR 380
EIW++ E N K QA+ +LQ S +E+ +A+R A
Sbjct: 407 EIWKKAEEAVNEVKRQAMT--ELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDA 464
Query: 381 LDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKH----GKTCVLAAQG 436
L V+ C C +AS+ CS C YC CQ K WEKH G+T QG
Sbjct: 465 LAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQG 524
Query: 437 D 437
D
Sbjct: 525 D 525
>gi|28329419 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8c [Homo sapiens]
Length = 567
Score = 48.5 bits (114), Expect = 1e-05
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 336 EIWERLERE-NRGKWQAIAKHQLQHVFSPSEQDLR--------------LQARRWAETYR 380
EIW++ E N K QA+ +LQ S +E+ +A+R A
Sbjct: 407 EIWKKAEEAVNEVKRQAMT--ELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDA 464
Query: 381 LDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKH----GKTCVLAAQG 436
L V+ C C +AS+ CS C YC CQ K WEKH G+T QG
Sbjct: 465 LAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQG 524
Query: 437 D 437
D
Sbjct: 525 D 525
>gi|28329416 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8b [Homo sapiens]
Length = 604
Score = 48.5 bits (114), Expect = 1e-05
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 336 EIWERLERE-NRGKWQAIAKHQLQHVFSPSEQDLR--------------LQARRWAETYR 380
EIW++ E N K QA+ +LQ S +E+ +A+R A
Sbjct: 444 EIWKKAEEAVNEVKRQAMT--ELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDA 501
Query: 381 LDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKH----GKTCVLAAQG 436
L V+ C C +AS+ CS C YC CQ K WEKH G+T QG
Sbjct: 502 LAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQG 561
Query: 437 D 437
D
Sbjct: 562 D 562
>gi|4757916 acute myelogenous leukemia 1 translocation 1 protein
isoform MTG8a [Homo sapiens]
Length = 577
Score = 48.5 bits (114), Expect = 1e-05
Identities = 38/121 (31%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 336 EIWERLERE-NRGKWQAIAKHQLQHVFSPSEQDLR--------------LQARRWAETYR 380
EIW++ E N K QA+ +LQ S +E+ +A+R A
Sbjct: 417 EIWKKAEEAVNEVKRQAMT--ELQKAVSEAERKAHDMITTERAKMERTVAEAKRQAAEDA 474
Query: 381 LDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKH----GKTCVLAAQG 436
L V+ C C +AS+ CS C YC CQ K WEKH G+T QG
Sbjct: 475 LAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQG 534
Query: 437 D 437
D
Sbjct: 535 D 535
>gi|13489073 egl nine homolog 1 [Homo sapiens]
Length = 426
Score = 43.9 bits (102), Expect = 3e-04
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 390 ERPRCAYCSA-EASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
+R C C E RCSRC++ +YCC+E Q + W+KH C
Sbjct: 17 DRQYCELCGKMENLLRCSRCRSSFYCCKEHQRQDWKKHKLVC 58
>gi|89353295 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1a [Homo sapiens]
Length = 575
Score = 40.8 bits (94), Expect = 0.002
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 336 EIWERLERE-NRGKWQAIAKHQL------QHVF-------SPSEQDLRLQARRWAETYRL 381
E W++ E N+ K QA+++ Q Q F + EQ + R+ AE L
Sbjct: 407 EFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFL 466
Query: 382 DVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
V+ C C +AS+ CS C YC CQ K WE+H + C
Sbjct: 467 -VINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 514
>gi|74229008 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1c [Homo sapiens]
Length = 595
Score = 40.8 bits (94), Expect = 0.002
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 336 EIWERLERE-NRGKWQAIAKHQL------QHVF-------SPSEQDLRLQARRWAETYRL 381
E W++ E N+ K QA+++ Q Q F + EQ + R+ AE L
Sbjct: 427 EFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFL 486
Query: 382 DVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
V+ C C +AS+ CS C YC CQ K WE+H + C
Sbjct: 487 -VINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 534
>gi|4826663 core-binding factor, runt domain, alpha subunit 2;
translocated to, 2 isoform MTGR1b [Homo sapiens]
Length = 604
Score = 40.8 bits (94), Expect = 0.002
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 336 EIWERLERE-NRGKWQAIAKHQL------QHVF-------SPSEQDLRLQARRWAETYRL 381
E W++ E N+ K QA+++ Q Q F + EQ + R+ AE L
Sbjct: 436 EFWKKTEEAVNKVKIQAMSEVQKAVAEAEQKAFEVIATERARMEQTIADVKRQAAEDAFL 495
Query: 382 DVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
V+ C C +AS+ CS C YC CQ K WE+H + C
Sbjct: 496 -VINEQEESTENCWNCGRKASETCSGCNIARYCGSFCQHKDWERHHRLC 543
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 354 KHQLQHVFSPSEQDLRLQARRWAETYR----LDVLEAVAPERPR--CAYCSAEASKRCSR 407
KH L+ + Q L + R + L+ +AV + + CA C EA C
Sbjct: 931 KHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYC-- 988
Query: 408 CQNEWYCCRECQVKHWEKHGKTCVLAA 434
C N YC CQ HW +H K+C +A
Sbjct: 989 CWNTSYCDYPCQQAHWPEHMKSCTQSA 1015
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 354 KHQLQHVFSPSEQDLRLQARRWAETYR----LDVLEAVAPERPR--CAYCSAEASKRCSR 407
KH L+ + Q L + R + L+ +AV + + CA C EA C
Sbjct: 956 KHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYC-- 1013
Query: 408 CQNEWYCCRECQVKHWEKHGKTCVLAA 434
C N YC CQ HW +H K+C +A
Sbjct: 1014 CWNTSYCDYPCQQAHWPEHMKSCTQSA 1040
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 8/87 (9%)
Query: 354 KHQLQHVFSPSEQDLRLQARRWAETYR----LDVLEAVAPERPR--CAYCSAEASKRCSR 407
KH L+ + Q L + R + L+ +AV + + CA C EA C
Sbjct: 956 KHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKKQWCANCKKEAIFYC-- 1013
Query: 408 CQNEWYCCRECQVKHWEKHGKTCVLAA 434
C N YC CQ HW +H K+C +A
Sbjct: 1014 CWNTSYCDYPCQQAHWPEHMKSCTQSA 1040
>gi|28461129 ankyrin repeat and MYND domain containing 2 [Homo
sapiens]
Length = 441
Score = 40.4 bits (93), Expect = 0.003
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 394 CAYCSAE-ASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
C C + ASKRCS C+ YC + CQ HW H K C
Sbjct: 320 CTTCGEKGASKRCSVCKMVIYCDQTCQKTHWFTHKKIC 357
>gi|67782303 zinc finger, MYND domain containing 17 [Homo sapiens]
Length = 460
Score = 40.4 bits (93), Expect = 0.003
Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
Query: 394 CAYCSAEAS--------KRCSRCQNEWYCCRECQVKHWEKHGKTC 430
CA+C A S + C RC+N +YC ECQ W H + C
Sbjct: 105 CAHCRALPSGLSDSKVLRHCKRCRNVYYCGPECQKSDWPAHRRVC 149
>gi|38505161 tudor domain containing 1 [Homo sapiens]
Length = 1189
Score = 39.7 bits (91), Expect = 0.005
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 394 CAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
C C S RCS+C+ +YC CQ + W H C
Sbjct: 170 CHRCGLFGSLRCSQCKQTYYCSTACQRRDWSAHSIVC 206
>gi|38016945 deformed epidermal autoregulatory factor 1 [Homo
sapiens]
Length = 565
Score = 38.5 bits (88), Expect = 0.012
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 356 QLQHVFSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCC 415
QL+ +F EQ R A T + + + C C EA C+ C YC
Sbjct: 469 QLKTLF---EQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCS 525
Query: 416 RECQVKHWEKHGKTC 430
CQ K W+ H C
Sbjct: 526 TFCQRKDWKDHQHIC 540
>gi|239749940 PREDICTED: similar to deformed epidermal
autoregulatory factor 1 [Homo sapiens]
Length = 426
Score = 38.5 bits (88), Expect = 0.012
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 356 QLQHVFSPSEQDLRLQARRWAETYRLDVLEAVAPERPRCAYCSAEASKRCSRCQNEWYCC 415
QL+ +F EQ R A T + + + C C EA C+ C YC
Sbjct: 330 QLKTLF---EQAKHASTYREAATNQAKIHADAERKEQSCVNCGREAMSECTGCHKVNYCS 386
Query: 416 RECQVKHWEKHGKTC 430
CQ K W+ H C
Sbjct: 387 TFCQRKDWKDHQHIC 401
>gi|57529246 ubiquitin thioesterase 19 [Homo sapiens]
Length = 1318
Score = 37.7 bits (86), Expect = 0.021
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 6/44 (13%)
Query: 393 RCAYCSA------EASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
+CA C E KRC+RC YC + CQ HW H C
Sbjct: 790 KCAACQRKQQSEDEKLKRCTRCYRVGYCNQLCQKTHWPDHKGLC 833
>gi|188035871 SET and MYND domain containing 2 [Homo sapiens]
Length = 433
Score = 37.7 bits (86), Expect = 0.021
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 394 CAYCSA--EASKRCSRCQNEWYCCRECQVKHWEKHGKTC 430
C YC E +C RC+ +YC ECQ + W H C
Sbjct: 52 CEYCFTRKEGLSKCGRCKQAFYCNVECQKEDWPMHKLEC 90
>gi|238814389 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 35.4 bits (80), Expect = 0.10
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 394 CAYCSAEASKRCSRCQNEWYCCRECQVKHWE-KHGKTC 430
C C EA C C N YC +CQ +HW +H +TC
Sbjct: 563 CYNCEEEAMYHC--CWNTSYCSIKCQQEHWHAEHKRTC 598
>gi|238814385 zinc finger, MYND domain containing 11 isoform a [Homo
sapiens]
Length = 602
Score = 35.4 bits (80), Expect = 0.10
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 394 CAYCSAEASKRCSRCQNEWYCCRECQVKHWE-KHGKTC 430
C C EA C C N YC +CQ +HW +H +TC
Sbjct: 563 CYNCEEEAMYHC--CWNTSYCSIKCQQEHWHAEHKRTC 598
>gi|21735594 programmed cell death 2 isoform 2 [Homo sapiens]
Length = 228
Score = 34.7 bits (78), Expect = 0.18
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 394 CAYCSAEASKRCSRCQNEWYCCRECQVKHWE-KHGKTC 430
C C K CSRC +YC +E Q W H + C
Sbjct: 135 CRVCGCLGPKTCSRCHKAYYCSKEHQTLDWRLGHKQAC 172
>gi|21735592 programmed cell death 2 isoform 1 [Homo sapiens]
Length = 344
Score = 34.7 bits (78), Expect = 0.18
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 394 CAYCSAEASKRCSRCQNEWYCCRECQVKHWE-KHGKTC 430
C C K CSRC +YC +E Q W H + C
Sbjct: 135 CRVCGCLGPKTCSRCHKAYYCSKEHQTLDWRLGHKQAC 172
>gi|19923997 zinc finger, MYND domain containing 19 [Homo sapiens]
Length = 227
Score = 34.7 bits (78), Expect = 0.18
Identities = 13/26 (50%), Positives = 14/26 (53%)
Query: 405 CSRCQNEWYCCRECQVKHWEKHGKTC 430
C RCQ YC +CQ K W H K C
Sbjct: 187 CGRCQVARYCGSQCQQKDWPAHKKHC 212
>gi|12232401 SET and MYND domain containing 3 [Homo sapiens]
Length = 369
Score = 34.3 bits (77), Expect = 0.23
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 404 RCSRCQNEWYCCRECQVKHWEKHGKTC 430
RCS+C+ YC +CQ K W H + C
Sbjct: 2 RCSQCRVAKYCSAKCQKKAWPDHKREC 28
>gi|116268103 zinc finger, FYVE domain containing 19 [Homo sapiens]
Length = 471
Score = 33.5 bits (75), Expect = 0.39
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 363 PSEQDLRLQAR-RWAETYRLDV---LEAVAPERPRCAYCSAEASKRCSRCQNEWYCCR 416
P+EQ R + R AE DV EA E P C C+ +A+ RC+ C + +C R
Sbjct: 386 PAEQASRPWTQPRGAEPEAQDVDPRPEAEEEELPWCCICNEDATLRCAGCDGDLFCAR 443
>gi|38093643 SET and MYND domain containing 1 [Homo sapiens]
Length = 490
Score = 31.2 bits (69), Expect = 2.0
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 394 CAYCSAEASK--RCSRCQNEWYCCRECQVKHWEKHGKTC 430
C C K RC +C+ YC R CQ W H C
Sbjct: 52 CHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNEC 90
>gi|31657140 insulin receptor-related receptor precursor [Homo
sapiens]
Length = 1297
Score = 30.8 bits (68), Expect = 2.6
Identities = 20/46 (43%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 130 AEDTVLDLVDYCHRKLTLLVAQS-----GCGGPPEGEGSQDSNPMQ 170
AED L L DYCHR L L + + G G PE E D P Q
Sbjct: 646 AEDGDLYLNDYCHRGLRLPTSNNDPRFDGEDGDPEAEMESDCCPCQ 691
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,038,538
Number of Sequences: 37866
Number of extensions: 817149
Number of successful extensions: 2282
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 2243
Number of HSP's gapped (non-prelim): 60
length of query: 440
length of database: 18,247,518
effective HSP length: 105
effective length of query: 335
effective length of database: 14,271,588
effective search space: 4780981980
effective search space used: 4780981980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.