Search of human proteins with 34335206

Search of human proteins with 34335206

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|34335206 cAMP responsive element modulator isoform b [Homo
sapiens]
         (137 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34335206 cAMP responsive element modulator isoform b [Homo sa...   263   3e-71
gi|34335228 cAMP responsive element modulator isoform v [Homo sa...   233   4e-62
gi|34335226 cAMP responsive element modulator isoform s [Homo sa...   233   4e-62
gi|34335224 cAMP responsive element modulator isoform t [Homo sa...   233   4e-62
gi|34335186 cAMP responsive element modulator isoform a [Homo sa...   233   5e-62
gi|34335222 cAMP responsive element modulator isoform u [Homo sa...   233   5e-62
gi|34335216 cAMP responsive element modulator isoform p [Homo sa...   158   2e-39
gi|34335214 cAMP responsive element modulator isoform o [Homo sa...   157   2e-39
gi|34335212 cAMP responsive element modulator isoform n [Homo sa...   157   2e-39
gi|34335210 cAMP responsive element modulator isoform m [Homo sa...   157   3e-39
gi|19745184 cAMP responsive element binding protein 1 isoform B ...   117   4e-27
gi|4758054 cAMP responsive element binding protein 1 isoform A [...   115   1e-26
gi|4885073 activating transcription factor 1 [Homo sapiens]            67   6e-12
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi...    32   0.13 
gi|167736389 putative MAPK activating protein PM20,PM21 isoform ...    32   0.16 
gi|64276486 serologically defined colon cancer antigen 10 [Homo ...    31   0.28 
gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens]       30   0.48 
gi|24432077 melanoma associated antigen (mutated) 1-like 1 [Homo...    30   0.62 
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    29   1.1  
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit...    29   1.1  
gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          29   1.4  
gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          29   1.4  
gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]          29   1.4  
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]      28   1.8  
gi|154277120 spectrin repeat containing, nuclear envelope 1 isof...    28   1.8  
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof...    28   1.8  
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo...    28   1.8  
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof...    28   1.8  
gi|71143127 IQ motif and Sec7 domain 3 [Homo sapiens]                  28   1.8  
gi|29570800 cadherin-like 26 isoform a [Homo sapiens]                  28   1.8  

>gi|34335206 cAMP responsive element modulator isoform b [Homo
           sapiens]
          Length = 137

 Score =  263 bits (672), Expect = 3e-71
 Identities = 137/137 (100%), Positives = 137/137 (100%)

Query: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60
           MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH
Sbjct: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60

Query: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120
           KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY
Sbjct: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120

Query: 121 SMYAAIRYDTVLALSLL 137
           SMYAAIRYDTVLALSLL
Sbjct: 121 SMYAAIRYDTVLALSLL 137


>gi|34335228 cAMP responsive element modulator isoform v [Homo
           sapiens]
          Length = 221

 Score =  233 bits (594), Expect = 4e-62
 Identities = 120/121 (99%), Positives = 121/121 (100%)

Query: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60
           MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH
Sbjct: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60

Query: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120
           KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY
Sbjct: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120

Query: 121 S 121
           +
Sbjct: 121 T 121


>gi|34335226 cAMP responsive element modulator isoform s [Homo
           sapiens]
          Length = 248

 Score =  233 bits (594), Expect = 4e-62
 Identities = 120/121 (99%), Positives = 121/121 (100%)

Query: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60
           MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH
Sbjct: 17  MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 76

Query: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120
           KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY
Sbjct: 77  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 136

Query: 121 S 121
           +
Sbjct: 137 N 137


>gi|34335224 cAMP responsive element modulator isoform t [Homo
           sapiens]
          Length = 236

 Score =  233 bits (594), Expect = 4e-62
 Identities = 120/121 (99%), Positives = 121/121 (100%)

Query: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60
           MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH
Sbjct: 17  MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 76

Query: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120
           KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY
Sbjct: 77  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 136

Query: 121 S 121
           +
Sbjct: 137 T 137


>gi|34335186 cAMP responsive element modulator isoform a [Homo
           sapiens]
          Length = 300

 Score =  233 bits (593), Expect = 5e-62
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60
           MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH
Sbjct: 17  MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 76

Query: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120
           KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY
Sbjct: 77  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 136


>gi|34335222 cAMP responsive element modulator isoform u [Homo
           sapiens]
          Length = 299

 Score =  233 bits (593), Expect = 5e-62
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 60
           MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH
Sbjct: 17  MTMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSH 76

Query: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120
           KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY
Sbjct: 77  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 136


>gi|34335216 cAMP responsive element modulator isoform p [Homo
           sapiens]
          Length = 207

 Score =  158 bits (399), Expect = 2e-39
 Identities = 80/82 (97%), Positives = 82/82 (100%)

Query: 40  QVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 99
           +VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT
Sbjct: 26  KVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 85

Query: 100 PPSIATMAVPTSIYQTSTGQYS 121
           PPSIATMAVPTSIYQTSTGQY+
Sbjct: 86  PPSIATMAVPTSIYQTSTGQYT 107


>gi|34335214 cAMP responsive element modulator isoform o [Homo
           sapiens]
          Length = 270

 Score =  157 bits (398), Expect = 2e-39
 Identities = 80/81 (98%), Positives = 81/81 (100%)

Query: 40  QVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 99
           +VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT
Sbjct: 26  KVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 85

Query: 100 PPSIATMAVPTSIYQTSTGQY 120
           PPSIATMAVPTSIYQTSTGQY
Sbjct: 86  PPSIATMAVPTSIYQTSTGQY 106


>gi|34335212 cAMP responsive element modulator isoform n [Homo
           sapiens]
          Length = 182

 Score =  157 bits (398), Expect = 2e-39
 Identities = 80/81 (98%), Positives = 81/81 (100%)

Query: 41  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 100
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP
Sbjct: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61

Query: 101 PSIATMAVPTSIYQTSTGQYS 121
           PSIATMAVPTSIYQTSTGQY+
Sbjct: 62  PSIATMAVPTSIYQTSTGQYT 82


>gi|34335210 cAMP responsive element modulator isoform m [Homo
           sapiens]
          Length = 245

 Score =  157 bits (397), Expect = 3e-39
 Identities = 80/80 (100%), Positives = 80/80 (100%)

Query: 41  VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 100
           VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP
Sbjct: 2   VAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTP 61

Query: 101 PSIATMAVPTSIYQTSTGQY 120
           PSIATMAVPTSIYQTSTGQY
Sbjct: 62  PSIATMAVPTSIYQTSTGQY 81


>gi|19745184 cAMP responsive element binding protein 1 isoform B
           [Homo sapiens]
          Length = 341

 Score =  117 bits (292), Expect = 4e-27
 Identities = 63/101 (62%), Positives = 77/101 (76%), Gaps = 7/101 (6%)

Query: 27  QTQTGQNSIPAL------AQVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNEL 79
           Q QT Q+S   L       Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+L
Sbjct: 82  QVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDL 141

Query: 80  SSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQY 120
           SSD PGVP+IEEE+SEEE + P+I T+ VPT IYQTS+GQY
Sbjct: 142 SSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQY 182


>gi|4758054 cAMP responsive element binding protein 1 isoform A
           [Homo sapiens]
          Length = 327

 Score =  115 bits (287), Expect = 1e-26
 Identities = 57/82 (69%), Positives = 70/82 (85%), Gaps = 1/82 (1%)

Query: 40  QVAAIAETDESAES-EGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 98
           Q++ IAE+++S ES + V DS KRREILSRRPSYRKILN+LSSD PGVP+IEEE+SEEE 
Sbjct: 87  QISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEET 146

Query: 99  TPPSIATMAVPTSIYQTSTGQY 120
           + P+I T+ VPT IYQTS+GQY
Sbjct: 147 SAPAITTVTVPTPIYQTSSGQY 168


>gi|4885073 activating transcription factor 1 [Homo sapiens]
          Length = 271

 Score = 66.6 bits (161), Expect = 6e-12
 Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 4/82 (4%)

Query: 40  QVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 98
           QV++++E++ES +S   I  S K   IL+RRPSYRKIL +LSS+     K + E S   G
Sbjct: 31  QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---G 87

Query: 99  TPPSIATMAVPTSIYQTSTGQY 120
              ++ +M+VPT IYQTS+GQY
Sbjct: 88  VSAAVTSMSVPTPIYQTSSGQY 109


>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapiens]
          Length = 1790

 Score = 32.3 bits (72), Expect = 0.13
 Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 12/113 (10%)

Query: 2    TMETVESQHDGSIT-ASLTESKSAHVQTQT----GQNSIPALAQVAAIAETDESAESEGV 56
            T  TVES+ + S      +E +S   +++T     ++  P+  + ++  E++ES  +E  
Sbjct: 1597 TESTVESEEESSSDYTEYSEEESEFSESETTEEESESETPSEEEESSTPESEESESTESE 1656

Query: 57   IDSHKRREILSRRPSYRKILNELS------SDVPGVPKI-EEERSEEEGTPPS 102
             +  ++  +L+RR    + + E+        +    PK+ EEE SEEE + P+
Sbjct: 1657 GEKARKNIVLARRRPMVEEVKEVKGRKEEPQEEQKEPKMEEEEHSEEEESGPA 1709


>gi|167736389 putative MAPK activating protein PM20,PM21 isoform 1
           [Homo sapiens]
          Length = 152

 Score = 32.0 bits (71), Expect = 0.16
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 44  IAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSI 103
           +AE+ E A   G ID    +++   +   RK     S   P VP + ++ S   G PP I
Sbjct: 6   VAESWEEAADSGEIDRRLEKKLKITQKESRK-----SKSPPKVPIVIQDDSLPAGPPPQI 60

Query: 104 ATMAVPTS 111
             +  PTS
Sbjct: 61  RILKRPTS 68


>gi|64276486 serologically defined colon cancer antigen 10 [Homo
           sapiens]
          Length = 472

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 10/105 (9%)

Query: 40  QVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSSD--------VPGVPKIEE 91
           ++A   + D SA  +   +    ++ +SR    RK   +L  +        V    K  E
Sbjct: 284 RIAKKLKKDTSANVKSAGEGEVEKKSVSRSEELRKEARQLKRELLAAKQKKVENAAKQAE 343

Query: 92  ERSEEEGTPP--SIATMAVPTSIYQTSTGQYSMYAAIRYDTVLAL 134
           +RSEEE  PP  ++A        Y+    Q S     R D  LAL
Sbjct: 344 KRSEEEEAPPDGAVAEYRREKQKYEALRKQQSKKGTSREDQTLAL 388


>gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens]
          Length = 1606

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 11/83 (13%)

Query: 22  KSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVIDSHKRREILSRRPSYRKILNELSS 81
           ++ +++  T  +S+P+ AQ  + AE ++ AE E  +     ++ LS          E+ +
Sbjct: 557 RTHYIRIHTLLHSMPS-AQGGSAAEEEDGAEEESTLKDSSEKDGLS----------EVDT 605

Query: 82  DVPGVPKIEEERSEEEGTPPSIA 104
                  +EE+R E EG  P  A
Sbjct: 606 VAADPSALEEDREEPEGATPGTA 628


>gi|24432077 melanoma associated antigen (mutated) 1-like 1 [Homo
           sapiens]
          Length = 637

 Score = 30.0 bits (66), Expect = 0.62
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 12/108 (11%)

Query: 11  DGSITASLTESKSAHVQTQTGQNS-----IPALAQVAAIAETDESAESEGVIDSH---KR 62
           D S   ++ ++  + V+T++ QNS      P+L++     E     +   V+  H   K 
Sbjct: 167 DKSQAPTMVDTIPSEVETKSLQNSSWCETFPSLSEDNDEKENKNKIDISAVMSVHSAVKE 226

Query: 63  REILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPT 110
                +   +   L+ LSSD+  +PK  +E SE+      + T+AVP+
Sbjct: 227 ESACVKDEKFAPPLSPLSSDMLIMPKALKEESED----TCLETLAVPS 270


>gi|238624188 diffuse panbronchiolitis critical region 1 protein
           [Homo sapiens]
          Length = 1393

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 12/123 (9%)

Query: 2   TMETVESQHDGSITASLTESKSAHVQTQTGQ-----NSIPALAQVAAIAETDESAESEGV 56
           T+   E    G  TA+   + S    T+ G+     N+ P+ A+     E    A  +  
Sbjct: 355 TLFPAEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTT 414

Query: 57  IDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTS 116
             S +  E   R P    + NE ++  P  P    ER+  E T PS    A PT   +T+
Sbjct: 415 SSSAESTEHGERTP----LANENTTPSPAEPTENRERTANENTTPS---PAGPTENRETT 467

Query: 117 TGQ 119
             +
Sbjct: 468 ANE 470



 Score = 26.2 bits (56), Expect = 9.0
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 2   TMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQV-AAIAETDESAESEGVIDSH 60
           T+   E   +   TA+   + S    T+ GQ +  A  +  ++ AE  E  E   + + +
Sbjct: 654 TLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANEN 713

Query: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 104
                     +  +  NE ++  P  P    ER+  E T PS A
Sbjct: 714 TTLSPAEPTENRERTANEKTTPFPAEPTENRERTANENTTPSPA 757


>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
           critical region 1 [Homo sapiens]
          Length = 1400

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 31/123 (25%), Positives = 48/123 (39%), Gaps = 12/123 (9%)

Query: 2   TMETVESQHDGSITASLTESKSAHVQTQTGQ-----NSIPALAQVAAIAETDESAESEGV 56
           T+   E    G  TA+   + S    T+ G+     N+ P+ A+     E    A  +  
Sbjct: 417 TLFPAEPTEHGERTANENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTT 476

Query: 57  IDSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTS 116
             S +  E   R P    + NE ++  P  P    ER+  E T PS    A PT   +T+
Sbjct: 477 SSSAESTEHGERTP----LANENTTPSPAEPTENRERTANENTTPS---PAGPTENRETT 529

Query: 117 TGQ 119
             +
Sbjct: 530 ANE 532



 Score = 26.2 bits (56), Expect = 9.0
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 1/104 (0%)

Query: 2   TMETVESQHDGSITASLTESKSAHVQTQTGQNSIPALAQV-AAIAETDESAESEGVIDSH 60
           T+   E   +   TA+   + S    T+ GQ +  A  +  ++ AE  E  E   + + +
Sbjct: 716 TLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEPTEHGERTPLANEN 775

Query: 61  KRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGTPPSIA 104
                     +  +  NE ++  P  P    ER+  E T PS A
Sbjct: 776 TTLSPAGPTENRERTANEKTTPFPAEPTENRERTANENTTPSPA 819


>gi|169207217 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2790

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 84  PGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYSMYAAI 126
           PGV K +E+  EEEG PP    M +   ++ T+ G+  + A +
Sbjct: 174 PGVEKDKEQEEEEEGLPP----MDLSNHLFFTAGGEAYLVAKL 212


>gi|169207592 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2706

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 84  PGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYSMYAAI 126
           PGV K +E+  EEEG PP    M +   ++ T+ G+  + A +
Sbjct: 90  PGVEKDKEQEEEEEGLPP----MDLSNHLFFTAGGEAYLVAKL 128


>gi|169207014 PREDICTED: zinc finger homeobox 2 [Homo sapiens]
          Length = 2706

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%)

Query: 84  PGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYSMYAAI 126
           PGV K +E+  EEEG PP    M +   ++ T+ G+  + A +
Sbjct: 90  PGVEKDKEQEEEEEGLPP----MDLSNHLFFTAGGEAYLVAKL 128


>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
          Length = 1390

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 4/71 (5%)

Query: 46   ETDESAES--EGVIDSHKRREILSRR--PSYRKILNELSSDVPGVPKIEEERSEEEGTPP 101
            E DE  E   E + +S K+R   S +  PSY  ++ + +S + G  + + E++E+  TP 
Sbjct: 1092 ELDEDFEQLCEEIQESRKKRGCSSSKYAPSYYHVMPKQNSTLVGDKRSDPEQNEKLKTPS 1151

Query: 102  SIATMAVPTSI 112
            +    + P  +
Sbjct: 1152 TPVACSTPAQL 1162


>gi|154277120 spectrin repeat containing, nuclear envelope 1 isoform
           3 [Homo sapiens]
          Length = 982

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 72  YRKILNELSSDVPGVPKIEEERSEEEGTPPSIATM 106
           Y K+L E SS +  V ++E +  EEE + P    +
Sbjct: 558 YMKLLGECSSSIDSVKRLEHKLKEEEESLPGFVNL 592


>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
            [Homo sapiens]
          Length = 3321

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 72   YRKILNELSSDVPGVPKIEEERSEEEGTPPSIATM 106
            Y K+L E SS +  V ++E +  EEE + P    +
Sbjct: 2897 YMKLLGECSSSIDSVKRLEHKLKEEEESLPGFVNL 2931


>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
            [Homo sapiens]
          Length = 8749

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 72   YRKILNELSSDVPGVPKIEEERSEEEGTPPSIATM 106
            Y K+L E SS +  V ++E +  EEE + P    +
Sbjct: 8325 YMKLLGECSSSIDSVKRLEHKLKEEEESLPGFVNL 8359


>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
            [Homo sapiens]
          Length = 8797

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 72   YRKILNELSSDVPGVPKIEEERSEEEGTPPSIATM 106
            Y K+L E SS +  V ++E +  EEE + P    +
Sbjct: 8373 YMKLLGECSSSIDSVKRLEHKLKEEEESLPGFVNL 8407


>gi|71143127 IQ motif and Sec7 domain 3 [Homo sapiens]
          Length = 759

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 1/110 (0%)

Query: 17  SLTESKSAHVQTQTGQNSIPALAQVAA-IAETDESAESEGVIDSHKRREILSRRPSYRKI 75
           S++ S +  V    G  ++ A A+ AA  AE  E++  E        RE  S   S  + 
Sbjct: 195 SVSSSTALSVANCLGAQTVQAPAEPAAGKAEQGETSGREAPEAPAVGREDASAEDSCAEA 254

Query: 76  LNELSSDVPGVPKIEEERSEEEGTPPSIATMAVPTSIYQTSTGQYSMYAA 125
               ++D    PK EEE  EEE         A    + Q S+   S  +A
Sbjct: 255 AASGAADGATAPKTEEEEEEEETAEVGRGAEAEAGDLEQLSSSSTSTKSA 304


>gi|29570800 cadherin-like 26 isoform a [Homo sapiens]
          Length = 832

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 14/41 (34%), Positives = 20/41 (48%)

Query: 17  SLTESKSAHVQTQTGQNSIPALAQVAAIAETDESAESEGVI 57
           SL+ + + HV  Q G N  PA  Q     +  E   S+GV+
Sbjct: 254 SLSSTTTVHVDVQEGNNHRPAFTQENYKVQIPEGRASQGVL 294


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.306    0.120    0.311 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,561,887
Number of Sequences: 37866
Number of extensions: 182605
Number of successful extensions: 814
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 772
Number of HSP's gapped (non-prelim): 85
length of query: 137
length of database: 18,247,518
effective HSP length: 91
effective length of query: 46
effective length of database: 14,801,712
effective search space: 680878752
effective search space used: 680878752
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.