BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33286418 pyruvate kinase, muscle isoform M2 [Homo sapiens]
(531 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33286418 pyruvate kinase, muscle isoform M2 [Homo sapiens] 1050 0.0
gi|33286422 pyruvate kinase, muscle isoform M1 [Homo sapiens] 1007 0.0
gi|33286420 pyruvate kinase, muscle isoform M1 [Homo sapiens] 1007 0.0
gi|32967597 pyruvate kinase, liver and RBC isoform 2 [Homo sapiens] 764 0.0
gi|10835121 pyruvate kinase, liver and RBC isoform 1 [Homo sapiens] 764 0.0
gi|169218111 PREDICTED: similar to pyruvate kinase, muscle [Homo... 645 0.0
gi|148235600 nucleolar protein 4 [Homo sapiens] 34 0.29
gi|27545315 translational activator of mitochondrially encoded c... 32 1.9
gi|189458819 transferrin receptor [Homo sapiens] 31 3.2
gi|189458817 transferrin receptor [Homo sapiens] 31 3.2
gi|32483410 vitamin D-binding protein precursor [Homo sapiens] 29 9.4
gi|18079254 p53 and DNA damage-regulated protein [Homo sapiens] 29 9.4
>gi|33286418 pyruvate kinase, muscle isoform M2 [Homo sapiens]
Length = 531
Score = 1050 bits (2715), Expect = 0.0
Identities = 531/531 (100%), Positives = 531/531 (100%)
Query: 1 MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET 60
MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET
Sbjct: 1 MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET 60
Query: 61 LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 120
LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR
Sbjct: 61 LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 120
Query: 121 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL 180
TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL
Sbjct: 121 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL 180
Query: 181 ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV 240
ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV
Sbjct: 181 ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV 240
Query: 241 FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE 300
FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE
Sbjct: 241 FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE 300
Query: 301 IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM 360
IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM
Sbjct: 301 IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM 360
Query: 361 LSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEAS 420
LSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEAS
Sbjct: 361 LSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEAS 420
Query: 421 FKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE 480
FKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE
Sbjct: 421 FKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE 480
Query: 481 AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP
Sbjct: 481 AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
>gi|33286422 pyruvate kinase, muscle isoform M1 [Homo sapiens]
Length = 531
Score = 1007 bits (2604), Expect = 0.0
Identities = 509/531 (95%), Positives = 521/531 (98%)
Query: 1 MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET 60
MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET
Sbjct: 1 MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET 60
Query: 61 LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 120
LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR
Sbjct: 61 LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 120
Query: 121 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL 180
TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL
Sbjct: 121 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL 180
Query: 181 ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV 240
ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV
Sbjct: 181 ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV 240
Query: 241 FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE 300
FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE
Sbjct: 241 FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE 300
Query: 301 IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM 360
IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM
Sbjct: 301 IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM 360
Query: 361 LSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEAS 420
LSGETAKGDYPLEAVRMQHLIAREAEAA++H +LFEEL R + ++D EA A+G+VEAS
Sbjct: 361 LSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELVRASSHSTDLMEAMAMGSVEAS 420
Query: 421 FKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE 480
+KC + A+IVLT+SGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE
Sbjct: 421 YKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE 480
Query: 481 AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP
Sbjct: 481 AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
>gi|33286420 pyruvate kinase, muscle isoform M1 [Homo sapiens]
Length = 531
Score = 1007 bits (2604), Expect = 0.0
Identities = 509/531 (95%), Positives = 521/531 (98%)
Query: 1 MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET 60
MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET
Sbjct: 1 MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET 60
Query: 61 LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 120
LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR
Sbjct: 61 LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 120
Query: 121 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL 180
TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL
Sbjct: 121 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL 180
Query: 181 ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV 240
ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV
Sbjct: 181 ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV 240
Query: 241 FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE 300
FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE
Sbjct: 241 FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIE 300
Query: 301 IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM 360
IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM
Sbjct: 301 IPAEKVFLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIM 360
Query: 361 LSGETAKGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEAS 420
LSGETAKGDYPLEAVRMQHLIAREAEAA++H +LFEEL R + ++D EA A+G+VEAS
Sbjct: 361 LSGETAKGDYPLEAVRMQHLIAREAEAAMFHRKLFEELVRASSHSTDLMEAMAMGSVEAS 420
Query: 421 FKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE 480
+KC + A+IVLT+SGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE
Sbjct: 421 YKCLAAALIVLTESGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQE 480
Query: 481 AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP
Sbjct: 481 AWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 531
>gi|32967597 pyruvate kinase, liver and RBC isoform 2 [Homo sapiens]
Length = 543
Score = 764 bits (1973), Expect = 0.0
Identities = 376/524 (71%), Positives = 444/524 (84%)
Query: 7 EAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIK 66
E GTAF Q QQL AAMADTFLEH+C LDIDS P+ AR+T II TIGPASRSVE LKEMIK
Sbjct: 19 ELGTAFFQQQQLPAAMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVERLKEMIK 78
Query: 67 SGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKG 126
+GMN+ARLNFSHG+HEYHAE+I NVR A ESFA P+ YRPVA+ALDTKGPEIRTG+++G
Sbjct: 79 AGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGILQG 138
Query: 127 SGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVK 186
+EVEL KG+ + +T+D A+ + + N +W+DY NI +VV VG +IY+DDGLISL V+
Sbjct: 139 GPESEVELVKGSQVLVTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLISLVVQ 198
Query: 187 QKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIR 246
+ G + LVT+VENGG LGS+KGVNLPGA VDLP +SE+D++DL+FGVE VD+VFASF+R
Sbjct: 199 KIGPEGLVTQVENGGVLGSRKGVNLPGAQVDLPGLSEQDVRDLRFGVEHGVDIVFASFVR 258
Query: 247 KASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKV 306
KASDV VR LG +G IKIISKIENHEGV+RFDEILE SDGIMVARGDLGIEIPAEKV
Sbjct: 259 KASDVAAVRAALGPEGHGIKIISKIENHEGVKRFDEILEVSDGIMVARGDLGIEIPAEKV 318
Query: 307 FLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETA 366
FLAQKMMIGRCN AGKPV+CATQMLESMI KPRPTRAE SDVANAVLDGADCIMLSGETA
Sbjct: 319 FLAQKMMIGRCNLAGKPVVCATQMLESMITKPRPTRAETSDVANAVLDGADCIMLSGETA 378
Query: 367 KGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSG 426
KG++P+EAV+MQH IAREAEAA+YH QLFEELRR AP++ DPTE TA+GAVEA+FKCC+
Sbjct: 379 KGNFPVEAVKMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEAAFKCCAA 438
Query: 427 AIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDV 486
AIIVLT +GRSA ++RYRPRA +IAVTR+ Q ARQ HL RG+FP+L ++P + WA+DV
Sbjct: 439 AIIVLTTTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLCRGVFPLLYREPPEAIWADDV 498
Query: 487 DLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPV 530
D RV F + GK RGF + GD+VIV+TGWRPGSG+TN MRV+ +
Sbjct: 499 DRRVQFGIESGKLRGFLRVGDLVIVVTGWRPGSGYTNIMRVLSI 542
>gi|10835121 pyruvate kinase, liver and RBC isoform 1 [Homo sapiens]
Length = 574
Score = 764 bits (1973), Expect = 0.0
Identities = 376/524 (71%), Positives = 444/524 (84%)
Query: 7 EAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIK 66
E GTAF Q QQL AAMADTFLEH+C LDIDS P+ AR+T II TIGPASRSVE LKEMIK
Sbjct: 50 ELGTAFFQQQQLPAAMADTFLEHLCLLDIDSEPVAARSTSIIATIGPASRSVERLKEMIK 109
Query: 67 SGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKG 126
+GMN+ARLNFSHG+HEYHAE+I NVR A ESFA P+ YRPVA+ALDTKGPEIRTG+++G
Sbjct: 110 AGMNIARLNFSHGSHEYHAESIANVREAVESFAGSPLSYRPVAIALDTKGPEIRTGILQG 169
Query: 127 SGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVK 186
+EVEL KG+ + +T+D A+ + + N +W+DY NI +VV VG +IY+DDGLISL V+
Sbjct: 170 GPESEVELVKGSQVLVTVDPAFRTRGNANTVWVDYPNIVRVVPVGGRIYIDDGLISLVVQ 229
Query: 187 QKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIR 246
+ G + LVT+VENGG LGS+KGVNLPGA VDLP +SE+D++DL+FGVE VD+VFASF+R
Sbjct: 230 KIGPEGLVTQVENGGVLGSRKGVNLPGAQVDLPGLSEQDVRDLRFGVEHGVDIVFASFVR 289
Query: 247 KASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKV 306
KASDV VR LG +G IKIISKIENHEGV+RFDEILE SDGIMVARGDLGIEIPAEKV
Sbjct: 290 KASDVAAVRAALGPEGHGIKIISKIENHEGVKRFDEILEVSDGIMVARGDLGIEIPAEKV 349
Query: 307 FLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETA 366
FLAQKMMIGRCN AGKPV+CATQMLESMI KPRPTRAE SDVANAVLDGADCIMLSGETA
Sbjct: 350 FLAQKMMIGRCNLAGKPVVCATQMLESMITKPRPTRAETSDVANAVLDGADCIMLSGETA 409
Query: 367 KGDYPLEAVRMQHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSG 426
KG++P+EAV+MQH IAREAEAA+YH QLFEELRR AP++ DPTE TA+GAVEA+FKCC+
Sbjct: 410 KGNFPVEAVKMQHAIAREAEAAVYHRQLFEELRRAAPLSRDPTEVTAIGAVEAAFKCCAA 469
Query: 427 AIIVLTKSGRSAHQVARYRPRAPIIAVTRNPQTARQAHLYRGIFPVLCKDPVQEAWAEDV 486
AIIVLT +GRSA ++RYRPRA +IAVTR+ Q ARQ HL RG+FP+L ++P + WA+DV
Sbjct: 470 AIIVLTTTGRSAQLLSRYRPRAAVIAVTRSAQAARQVHLCRGVFPLLYREPPEAIWADDV 529
Query: 487 DLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPV 530
D RV F + GK RGF + GD+VIV+TGWRPGSG+TN MRV+ +
Sbjct: 530 DRRVQFGIESGKLRGFLRVGDLVIVVTGWRPGSGYTNIMRVLSI 573
>gi|169218111 PREDICTED: similar to pyruvate kinase, muscle [Homo
sapiens]
Length = 364
Score = 645 bits (1663), Expect = 0.0
Identities = 329/330 (99%), Positives = 329/330 (99%), Gaps = 1/330 (0%)
Query: 1 MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET 60
MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET
Sbjct: 1 MSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVET 60
Query: 61 LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 120
LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR
Sbjct: 61 LKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIR 120
Query: 121 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL 180
TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL
Sbjct: 121 TGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGL 180
Query: 181 ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV 240
ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV
Sbjct: 181 ISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMV 240
Query: 241 FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRR-FDEILEASDGIMVARGDLGI 299
FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRR FDEILEASDGIMVARGDLGI
Sbjct: 241 FASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRQFDEILEASDGIMVARGDLGI 300
Query: 300 EIPAEKVFLAQKMMIGRCNRAGKPVICATQ 329
EIPAEKVFLAQKMMIGRCNRAGKPVICATQ
Sbjct: 301 EIPAEKVFLAQKMMIGRCNRAGKPVICATQ 330
>gi|148235600 nucleolar protein 4 [Homo sapiens]
Length = 638
Score = 34.3 bits (77), Expect = 0.29
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 161 YKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPA 220
Y+ I +++ D+ VK KG + GG G+K+ + +P D
Sbjct: 33 YERIVQLLNGSESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGVG 92
Query: 221 VSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISK 270
V EK VE D++++ + + ++RK G+K + K IS+
Sbjct: 93 VDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQK-RTYKAISE 141
>gi|27545315 translational activator of mitochondrially encoded
cytochrome c oxidase I [Homo sapiens]
Length = 297
Score = 31.6 bits (70), Expect = 1.9
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 20/126 (15%)
Query: 137 GATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTE 196
G++L I + KC +I + KN V+ VG++ D +KG +V E
Sbjct: 145 GSSLLIEALSNSSHKCQADIRHILNKN-GGVMAVGARHSFD---------KKGV--IVVE 192
Query: 197 VENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFASFIRKASDVHEVRK 256
VE+ KK VNL A L E +D+K +++ VF FI AS +H+VRK
Sbjct: 193 VEDR----EKKAVNLERA---LEMAIEAGAEDVKETEDEEERNVF-KFICDASSLHQVRK 244
Query: 257 VLGEKG 262
L G
Sbjct: 245 KLDSLG 250
>gi|189458819 transferrin receptor [Homo sapiens]
Length = 760
Score = 30.8 bits (68), Expect = 3.2
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 139 TLKITLDNAYMEK-----CDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADF- 192
T+K+ +N+Y+ + DEN+ L +N + ++ SK++ D + +QVK +
Sbjct: 143 TIKLLNENSYVPREAGSQKDENLA-LYVENQFREFKL-SKVWRDQHFVKIQVKDSAQNSV 200
Query: 193 --------LVTEVEN-GGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFAS 243
LV VEN GG + K + G V ++KD +DL V + +V A
Sbjct: 201 IIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFGTKKDFEDLYTPVNGSIVIVRAG 260
Query: 244 FIRKASDV 251
I A V
Sbjct: 261 KITFAEKV 268
>gi|189458817 transferrin receptor [Homo sapiens]
Length = 760
Score = 30.8 bits (68), Expect = 3.2
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 139 TLKITLDNAYMEK-----CDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADF- 192
T+K+ +N+Y+ + DEN+ L +N + ++ SK++ D + +QVK +
Sbjct: 143 TIKLLNENSYVPREAGSQKDENLA-LYVENQFREFKL-SKVWRDQHFVKIQVKDSAQNSV 200
Query: 193 --------LVTEVEN-GGSLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQDVDMVFAS 243
LV VEN GG + K + G V ++KD +DL V + +V A
Sbjct: 201 IIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFGTKKDFEDLYTPVNGSIVIVRAG 260
Query: 244 FIRKASDV 251
I A V
Sbjct: 261 KITFAEKV 268
>gi|32483410 vitamin D-binding protein precursor [Homo sapiens]
Length = 474
Score = 29.3 bits (64), Expect = 9.4
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 76 FSHGTHEYHAETIKNVRTATESFAS---DPILYRPVAVALDTKGPEIRTGLIKGSGTAEV 132
F GT E ++ +K V + TE+ + DP Y AL K E + GTAE
Sbjct: 52 FPSGTFEQVSQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAEC 111
Query: 133 ELKKGATLKITL 144
K+G K+ +
Sbjct: 112 CTKEGLERKLCM 123
>gi|18079254 p53 and DNA damage-regulated protein [Homo sapiens]
Length = 133
Score = 29.3 bits (64), Expect = 9.4
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 245 IRKASDVHEV-RKVLGEKGKNIKIISKI-ENHEGVRRFDEILEASDGIMVARGDLGIEIP 302
+R +V E+ +VL +K + + + +K +N EG+R + L S+ +MV G++ I++P
Sbjct: 10 LRYLVEVEELAEEVLADKRQIVDLDTKRNQNREGLRALQKDLSLSEDVMVCFGNMFIKMP 69
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,726,547
Number of Sequences: 37866
Number of extensions: 794972
Number of successful extensions: 1734
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1723
Number of HSP's gapped (non-prelim): 12
length of query: 531
length of database: 18,247,518
effective HSP length: 107
effective length of query: 424
effective length of database: 14,195,856
effective search space: 6019042944
effective search space used: 6019042944
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.