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Search of human proteins with 32967294
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32967294 C1q and tumor necrosis factor related protein 6
[Homo sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32967300 C1q and tumor necrosis factor related protein 6 [Hom... 578 e-165
gi|32967294 C1q and tumor necrosis factor related protein 6 [Hom... 578 e-165
gi|116686136 C1q and tumor necrosis factor related protein 8 [Ho... 245 4e-65
gi|38372917 C1q and tumor necrosis factor related protein 1 isof... 234 6e-62
gi|13569944 C1q and tumor necrosis factor related protein 1 isof... 234 6e-62
gi|38372913 C1q and tumor necrosis factor related protein 1 [Hom... 228 6e-60
gi|13569919 C1q and tumor necrosis factor related protein 3 isof... 100 1e-21
gi|4757760 adiponectin precursor [Homo sapiens] 99 5e-21
gi|62739183 C1q and tumor necrosis factor related protein 3 isof... 98 7e-21
gi|94818738 C1q and tumor necrosis factor related protein 2 [Hom... 88 7e-18
gi|13994280 C1q and tumor necrosis factor related protein 7 isof... 87 1e-17
gi|206597454 C1q and tumor necrosis factor related protein 7 iso... 87 1e-17
gi|206597452 C1q and tumor necrosis factor related protein 7 iso... 87 1e-17
gi|58801559 complement component 1, q subcomponent-like 3 [Homo ... 86 3e-17
gi|7705753 complement component 1, q subcomponent, A chain precu... 85 8e-17
gi|56606142 complement component 1, q subcomponent-like 4 [Homo ... 84 1e-16
gi|154937344 complement component 1, q subcomponent-like 2 [Homo... 84 1e-16
gi|5729785 complement component 1, q subcomponent-like 1 [Homo s... 82 4e-16
gi|65301115 C1q and tumor necrosis factor related protein 9 [Hom... 79 4e-15
gi|56847616 C1q and tumor necrosis factor related protein 9B [Ho... 78 1e-14
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 75 5e-14
gi|148233912 C1q and tumor necrosis factor related protein 4 [Ho... 75 5e-14
gi|56786155 complement component 1, q subcomponent, C chain prec... 75 6e-14
gi|166235903 complement component 1, q subcomponent, C chain pre... 75 6e-14
gi|14149712 C1q and tumor necrosis factor related protein 5 prec... 74 1e-13
gi|122937273 hypothetical protein LOC131149 [Homo sapiens] 71 1e-12
gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens] 68 8e-12
gi|5901944 elastin microfibril interfacer 1 [Homo sapiens] 68 8e-12
gi|87298828 complement component 1, q subcomponent, B chain prec... 67 2e-11
gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens] 61 1e-09
>gi|32967300 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 578 bits (1490), Expect = e-165
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MQWLRVRESPGEATGHRVTMGTAALGPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCC 60
MQWLRVRESPGEATGHRVTMGTAALGPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCC
Sbjct: 1 MQWLRVRESPGEATGHRVTMGTAALGPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCC 60
Query: 61 DSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEP 120
DSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEP
Sbjct: 61 DSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEP 120
Query: 121 GPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMAT 180
GPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMAT
Sbjct: 121 GPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMAT 180
Query: 181 GQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAY 240
GQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAY
Sbjct: 181 GQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAY 240
Query: 241 GDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAEDD 278
GDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAEDD
Sbjct: 241 GDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAEDD 278
>gi|32967294 C1q and tumor necrosis factor related protein 6 [Homo
sapiens]
Length = 278
Score = 578 bits (1490), Expect = e-165
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MQWLRVRESPGEATGHRVTMGTAALGPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCC 60
MQWLRVRESPGEATGHRVTMGTAALGPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCC
Sbjct: 1 MQWLRVRESPGEATGHRVTMGTAALGPVWAALLLFLLMCEIPMVELTFDRAVASGCQRCC 60
Query: 61 DSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEP 120
DSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEP
Sbjct: 61 DSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEP 120
Query: 121 GPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMAT 180
GPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMAT
Sbjct: 121 GPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMAT 180
Query: 181 GQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAY 240
GQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAY
Sbjct: 181 GQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAY 240
Query: 241 GDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAEDD 278
GDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAEDD
Sbjct: 241 GDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAEDD 278
>gi|116686136 C1q and tumor necrosis factor related protein 8 [Homo
sapiens]
Length = 252
Score = 245 bits (625), Expect = 4e-65
Identities = 121/222 (54%), Positives = 152/222 (68%), Gaps = 3/222 (1%)
Query: 56 CQRCCDSEDPLDP-AHVSSAS--SSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMG 112
C CC P P A VS LP +RP I+I ILKG+KG+ G G G G
Sbjct: 26 CVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKGEKGEAGVRGRAGRSG 85
Query: 113 REGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNL 172
+EGP G G QG +G KG++G PGA C++ + AFSVGR+ LHS + FQ + F+ VNL
Sbjct: 86 KEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVPFDTELVNL 145
Query: 173 DGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQ 232
DG FD+A G+F + G+YF SLNVH+WNYKETY+HIM N++ A +LYAQPSERS+MQ+Q
Sbjct: 146 DGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQ 205
Query: 233 SVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIK 274
S+ML LA GD VWVR+F+R R+NAIY D YITFSGHL+K
Sbjct: 206 SLMLLLAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVK 247
>gi|38372917 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 234 bits (597), Expect = 6e-62
Identities = 119/222 (53%), Positives = 149/222 (67%), Gaps = 15/222 (6%)
Query: 53 ASGCQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMG 112
AS C RCCD + PA P INITILKG+KGD G GL G G
Sbjct: 70 ASRCLRCCDPGTSMYPATAV---------------PQINITILKGEKGDRGDRGLQGKYG 114
Query: 113 REGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNL 172
+ G G G G KG KG MG+PG C+ + AFSVGRK +HS +QT++F+ FVNL
Sbjct: 115 KTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNL 174
Query: 173 DGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQ 232
F+M TG+F + G+YFFSLNVH+WN KETY+HIM N++E VIL+AQ +RSIMQSQ
Sbjct: 175 YDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQ 234
Query: 233 SVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIK 274
S+ML+L D+VWVRL+K +RENAI+S + DTYITFSG+L+K
Sbjct: 235 SLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVK 276
>gi|13569944 C1q and tumor necrosis factor related protein 1 isoform
1 [Homo sapiens]
Length = 281
Score = 234 bits (597), Expect = 6e-62
Identities = 119/222 (53%), Positives = 149/222 (67%), Gaps = 15/222 (6%)
Query: 53 ASGCQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMG 112
AS C RCCD + PA P INITILKG+KGD G GL G G
Sbjct: 70 ASRCLRCCDPGTSMYPATAV---------------PQINITILKGEKGDRGDRGLQGKYG 114
Query: 113 REGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNL 172
+ G G G G KG KG MG+PG C+ + AFSVGRK +HS +QT++F+ FVNL
Sbjct: 115 KTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFSVGRKKPMHSNHYYQTVIFDTEFVNL 174
Query: 173 DGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQ 232
F+M TG+F + G+YFFSLNVH+WN KETY+HIM N++E VIL+AQ +RSIMQSQ
Sbjct: 175 YDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYLHIMKNEEEVVILFAQVGDRSIMQSQ 234
Query: 233 SVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIK 274
S+ML+L D+VWVRL+K +RENAI+S + DTYITFSG+L+K
Sbjct: 235 SLMLELREQDQVWVRLYKGERENAIFSEELDTYITFSGYLVK 276
>gi|38372913 C1q and tumor necrosis factor related protein 1 [Homo
sapiens]
Length = 199
Score = 228 bits (580), Expect = 6e-60
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 88 PYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFS 147
P INITILKG+KGD G GL G G+ G G G G KG KG MG+PG C+ + AFS
Sbjct: 8 PQINITILKGEKGDRGDRGLQGKYGKTGSAGARGHTGPKGQKGSMGAPGERCKSHYAAFS 67
Query: 148 VGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYV 207
VGRK +HS +QT++F+ FVNL F+M TG+F + G+YFFSLNVH+WN KETY+
Sbjct: 68 VGRKKPMHSNHYYQTVIFDTEFVNLYDHFNMFTGKFYCYVPGLYFFSLNVHTWNQKETYL 127
Query: 208 HIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYIT 267
HIM N++E VIL+AQ +RSIMQSQS+ML+L D+VWVRL+K +RENAI+S + DTYIT
Sbjct: 128 HIMKNEEEVVILFAQVGDRSIMQSQSLMLELREQDQVWVRLYKGERENAIFSEELDTYIT 187
Query: 268 FSGHLIK 274
FSG+L+K
Sbjct: 188 FSGYLVK 194
>gi|13569919 C1q and tumor necrosis factor related protein 3 isoform
a [Homo sapiens]
Length = 246
Score = 100 bits (250), Expect = 1e-21
Identities = 76/268 (28%), Positives = 112/268 (41%), Gaps = 57/268 (21%)
Query: 29 WAALLLFLL---MCEIPMVELTFDRAVASGCQRCCDSEDPLDPAHVSSASSSGRPHALPE 85
W L LF L +C+ +E + C +CC H
Sbjct: 9 WQLLALFFLPFCLCQDEYMESPQTGGLPPDCSKCC--------------------HGDYS 48
Query: 86 IRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGD----------------- 128
R Y +G G PGP G+PG G G G G +G+KG+
Sbjct: 49 FRGY------QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHG 102
Query: 129 -KGEMGSPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPL 187
KGE G PG P + + AF A H ++F V N+ FD+ TG+F AP+
Sbjct: 103 PKGEKGYPGIPPELQ-IAFMA--SLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPV 159
Query: 188 RGIYFFSLNVHSW-NYKETYVHIMHNQKEAVILYA-QPSERSIMQSQSVMLDLAYGDRVW 245
G+YFF+ ++ + +E YV++MHN +Y+ + +S S +L LA GD VW
Sbjct: 160 SGVYFFTFSMMKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVW 219
Query: 246 VRLFKRQRENAIYSNDFDTYITFSGHLI 273
+R+ N D + TF+G L+
Sbjct: 220 LRM-----GNGALHGDHQRFSTFAGFLL 242
>gi|4757760 adiponectin precursor [Homo sapiens]
Length = 244
Score = 98.6 bits (244), Expect = 5e-21
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 5/179 (2%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALH 155
KG+KGDPG +G G +G G G GP+G G +G G PG AFSVG +T +
Sbjct: 65 KGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRSAFSVGLETYVT 124
Query: 156 SGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKE 215
+ F ++F N +D +TG+F + G+Y+F+ ++ + K+ V + K
Sbjct: 125 IPN--MPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVY-MKDVKVSLFKKDKA 181
Query: 216 AVILYAQPSERSIMQ-SQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLI 273
+ Y Q E ++ Q S SV+L L GD+VW++++ N +Y+ D D TF+G L+
Sbjct: 182 MLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYA-DNDNDSTFTGFLL 239
>gi|62739183 C1q and tumor necrosis factor related protein 3 isoform
b [Homo sapiens]
Length = 319
Score = 98.2 bits (243), Expect = 7e-21
Identities = 63/198 (31%), Positives = 94/198 (47%), Gaps = 28/198 (14%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGD------------------KGEMGSPGA 137
+G G PGP G+PG G G G G +G+KG+ KGE G PG
Sbjct: 126 QGPPGPPGPPGIPGNHGNNGNNGATGHEGAKGEKGDKGDLGPRGERGQHGPKGEKGYPGI 185
Query: 138 PCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV 197
P + + AF A H ++F V N+ FD+ TG+F AP+ G+YFF+ ++
Sbjct: 186 PPELQ-IAFMA--SLATHFSNQNSGIIFSSVETNIGNFFDVMTGRFGAPVSGVYFFTFSM 242
Query: 198 HSW-NYKETYVHIMHNQKEAVILYA-QPSERSIMQSQSVMLDLAYGDRVWVRLFKRQREN 255
+ +E YV++MHN +Y+ + +S S +L LA GD VW+R+ N
Sbjct: 243 MKHEDVEEVYVYLMHNGNTVFSMYSYEMKGKSDTSSNHAVLKLAKGDEVWLRM-----GN 297
Query: 256 AIYSNDFDTYITFSGHLI 273
D + TF+G L+
Sbjct: 298 GALHGDHQRFSTFAGFLL 315
>gi|94818738 C1q and tumor necrosis factor related protein 2 [Homo
sapiens]
Length = 330
Score = 88.2 bits (217), Expect = 7e-18
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 25/200 (12%)
Query: 97 GDKGDPGPMGLPGYMGREGPQ------------GEPGPQGSKGDKGEMGSPGAPCQ---- 140
G++G PGP G G +GR GP+ G PG +G KG KGE G PG PC
Sbjct: 133 GNRGKPGPKGKAGAIGRAGPRGPKGVNGTPGKHGTPGKKGPKGKKGEPGLPG-PCSCGSG 191
Query: 141 --KRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVH 198
K F+ +V + + + F+++ +N G ++ ++G+F + GIY+F+ ++
Sbjct: 192 HTKSAFSVAVTKSYP----RERLPIKFDKILMNEGGHYNASSGKFVCGVPGIYYFTYDIT 247
Query: 199 SWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIY 258
N K + ++HN + + + + + S S +L L GD VW+++F + +N ++
Sbjct: 248 LAN-KHLAIGLVHNGQYRIRTFDANTGNHDVASGSTILALKQGDEVWLQIFYSE-QNGLF 305
Query: 259 SNDFDTYITFSGHLIKAEDD 278
+ + T F+G LI A+ D
Sbjct: 306 YDPYWTDSLFTGFLIYADQD 325
Score = 45.8 bits (107), Expect = 4e-05
Identities = 20/40 (50%), Positives = 23/40 (57%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G PGP G+ G MG G G+ G G +GD GE G PG
Sbjct: 91 GPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPPG 130
Score = 44.3 bits (103), Expect = 1e-04
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 95 LKGDKGDPGPMGLP---GYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
L G +G PGP G P G MGR G G+ G G GD+G+ G G P
Sbjct: 83 LPGPQGPPGPPGAPGPSGMMGRMGFPGKDGQDGHDGDRGDSGEEGPP 129
>gi|13994280 C1q and tumor necrosis factor related protein 7 isoform
b [Homo sapiens]
Length = 289
Score = 87.4 bits (215), Expect = 1e-17
Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGP---QGSKGDKGEMGSPGAPCQKRF------FA 145
L G+KGD G G G +G EG +GE GP G KGD+GE G PG P R A
Sbjct: 90 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 149
Query: 146 FSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKET 205
FSVG T+ E+ ++F +V N ++ ATG+F GIY+FS ++ N K
Sbjct: 150 FSVGITTSY--PEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN-KHL 206
Query: 206 YVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTY 265
+ ++HN + + + + + S S ++ L D VW+ +F +N ++S+
Sbjct: 207 AIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 265
Query: 266 ITFSGHLIKAEDD 278
FSG L+ + D
Sbjct: 266 SLFSGFLLYVDTD 278
Score = 42.4 bits (98), Expect = 5e-04
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
L G G PG G PG GR G G G G KG+KGE G+ G
Sbjct: 39 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG 80
>gi|206597454 C1q and tumor necrosis factor related protein 7
isoform b [Homo sapiens]
Length = 289
Score = 87.4 bits (215), Expect = 1e-17
Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGP---QGSKGDKGEMGSPGAPCQKRF------FA 145
L G+KGD G G G +G EG +GE GP G KGD+GE G PG P R A
Sbjct: 90 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 149
Query: 146 FSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKET 205
FSVG T+ E+ ++F +V N ++ ATG+F GIY+FS ++ N K
Sbjct: 150 FSVGITTSY--PEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN-KHL 206
Query: 206 YVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTY 265
+ ++HN + + + + + S S ++ L D VW+ +F +N ++S+
Sbjct: 207 AIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 265
Query: 266 ITFSGHLIKAEDD 278
FSG L+ + D
Sbjct: 266 SLFSGFLLYVDTD 278
Score = 42.4 bits (98), Expect = 5e-04
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
L G G PG G PG GR G G G G KG+KGE G+ G
Sbjct: 39 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG 80
>gi|206597452 C1q and tumor necrosis factor related protein 7
isoform a [Homo sapiens]
Length = 296
Score = 87.4 bits (215), Expect = 1e-17
Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 13/193 (6%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGP---QGSKGDKGEMGSPGAPCQKRF------FA 145
L G+KGD G G G +G EG +GE GP G KGD+GE G PG P R A
Sbjct: 97 LAGEKGDQGETGKKGPIGPEGEKGEVGPIGPPGPKGDRGEQGDPGLPGVCRCGSIVLKSA 156
Query: 146 FSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKET 205
FSVG T+ E+ ++F +V N ++ ATG+F GIY+FS ++ N K
Sbjct: 157 FSVGITTSY--PEERLPIIFNKVLFNEGEHYNPATGKFICAFPGIYYFSYDITLAN-KHL 213
Query: 206 YVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTY 265
+ ++HN + + + + + S S ++ L D VW+ +F +N ++S+
Sbjct: 214 AIGLVHNGQYRIKTFDANTGNHDVASGSTVIYLQPEDEVWLEIFFTD-QNGLFSDPGWAD 272
Query: 266 ITFSGHLIKAEDD 278
FSG L+ + D
Sbjct: 273 SLFSGFLLYVDTD 285
Score = 42.4 bits (98), Expect = 5e-04
Identities = 21/42 (50%), Positives = 23/42 (54%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
L G G PG G PG GR G G G G KG+KGE G+ G
Sbjct: 46 LPGPPGPPGANGSPGPHGRIGLPGRDGRDGRKGEKGEKGTAG 87
>gi|58801559 complement component 1, q subcomponent-like 3 [Homo
sapiens]
Length = 255
Score = 86.3 bits (212), Expect = 3e-17
Identities = 68/237 (28%), Positives = 102/237 (43%), Gaps = 25/237 (10%)
Query: 56 CQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREG 115
C+ CD ++ G +LP I KG+ G PG G G G G
Sbjct: 28 CRMVCDPYGGTKAPSTAATPDRGLMQSLPTF-----IQGPKGEAGRPGKAGPRGPPGEPG 82
Query: 116 PQGEPGPQGSKGDKGEMGSPGAPCQKRFFA--------FSVGRKTALHSG-----EDFQT 162
P G GP G KG+ G G PG P A +S K A ++G E ++
Sbjct: 83 PPGPMGPPGEKGEPGRQGLPGPPGAPGLNAAGAISAATYSTVPKIAFYAGLKRQHEGYEV 142
Query: 163 LLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV--HSWNYKETYVHIMHNQKEAVILY 220
L F+ V NL +D TG+F + GIYFF+ +V + + + N +
Sbjct: 143 LKFDDVVTNLGNHYDPTTGKFTCSIPGIYFFTYHVLMRGGDGTSMWADLCKNNQVRASAI 202
Query: 221 AQPSERSI-MQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLIKAE 276
AQ ++++ S SV+L L GD V+++L + + + Y TFSG +I A+
Sbjct: 203 AQDADQNYDYASNSVVLHLEPGDEVYIKL----DGGKAHGGNNNKYSTFSGFIIYAD 255
>gi|7705753 complement component 1, q subcomponent, A chain
precursor [Homo sapiens]
Length = 245
Score = 84.7 bits (208), Expect = 8e-17
Identities = 66/199 (33%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 78 GRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGA 137
G P A P IR I LKGD+G+PGP G PG +G GP G G +G G KG GSPG
Sbjct: 52 GEPGA-PGIRT--GIQGLKGDQGEPGPSGNPGKVGYPGPSGPLGARGIPGIKGTKGSPGN 108
Query: 138 PCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV 197
+ AFS R+ G ++F+ V N + + +G+F + G Y+F+ V
Sbjct: 109 IKDQPRPAFSAIRRNPPMGG---NVVIFDTVITNQEEPYQNHSGRFVCTVPGYYYFTFQV 165
Query: 198 HS-WNYKETYVHIMHNQKEAVILYAQPSERSIMQ--SQSVMLDLAYGDRVWVRLFKRQRE 254
S W + V Q + + + + + Q S ++L L GD+VWV K ++
Sbjct: 166 LSQWEICLSIVSSSRGQVRRSLGFCDTTNKGLFQVVSGGMVLQLQQGDQVWVE--KDPKK 223
Query: 255 NAIYSNDFDTYITFSGHLI 273
IY + FSG LI
Sbjct: 224 GHIYQGS-EADSVFSGFLI 241
Score = 36.6 bits (83), Expect = 0.025
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 112 GREGPQGEPGPQGSKGDKGEMGSPGAP 138
G++G G PG +G G KGE G PGAP
Sbjct: 31 GKKGEAGRPGRRGRPGLKGEQGEPGAP 57
>gi|56606142 complement component 1, q subcomponent-like 4 [Homo
sapiens]
Length = 238
Score = 84.3 bits (207), Expect = 1e-16
Identities = 64/229 (27%), Positives = 103/229 (44%), Gaps = 32/229 (13%)
Query: 56 CQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREG 115
C+ CD P P G P ++P P G G +G G G G
Sbjct: 28 CRMVCDPHGPRGPG------PDGAPASVPPFPP-----------GAKGEVGRRGKAGLRG 70
Query: 116 PQGEPGPQGSKGDKGEMGSPGAPCQ-KRFFAFSVG--RKTALHSG-----EDFQTLLFER 167
P G PGP+G G+ G G PG P A + G + A ++G E ++ L F+
Sbjct: 71 PPGPPGPRGPPGEPGRPGPPGPPGPGPGGVAPAAGYVPRIAFYAGLRRPHEGYEVLRFDD 130
Query: 168 VFVNLDGCFDMATGQFAAPLRGIYFFSLNV--HSWNYKETYVHIMHNQKEAVILYAQPSE 225
V N+ ++ A+G+F P+ G+YFF+ +V + + +M N + AQ ++
Sbjct: 131 VVTNVGNAYEAASGKFTCPMPGVYFFAYHVLMRGGDGTSMWADLMKNGQVRASAIAQDAD 190
Query: 226 RSI-MQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLI 273
++ S SV+L L GD V+++L ++ + + Y TFSG +I
Sbjct: 191 QNYDYASNSVILHLDVGDEVFIKL----DGGKVHGGNTNKYSTFSGFII 235
>gi|154937344 complement component 1, q subcomponent-like 2 [Homo
sapiens]
Length = 287
Score = 84.0 bits (206), Expect = 1e-16
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 40/215 (18%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP---------------- 138
++G KGDPG G PG G G G PGP+G G+KG+ G PG P
Sbjct: 74 IQGPKGDPGRPGKPGPRGPPGEPGPPGPRGPPGEKGDSGRPGLPGLQLTAGTASGVGVVG 133
Query: 139 ------------CQKRFFAFSVGRKTALHSG-----EDFQTLLFERVFVNLDGCFDMATG 181
A G K A + G E ++ L F+ V NL +D TG
Sbjct: 134 GGAGVGGDSEGEVTSALSATFSGPKIAFYVGLKSPHEGYEVLKFDDVVTNLGNHYDPTTG 193
Query: 182 QFAAPLRGIYFFSLNV--HSWNYKETYVHIMHNQKEAVILYAQPSERSI-MQSQSVMLDL 238
+F+ +RGIYFF+ ++ + + + N + AQ ++++ S SV+L L
Sbjct: 194 KFSCQVRGIYFFTYHILMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVVLHL 253
Query: 239 AYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLI 273
GD V+V+L + + + Y TFSG L+
Sbjct: 254 DSGDEVYVKL----DGGKAHGGNNNKYSTFSGFLL 284
>gi|5729785 complement component 1, q subcomponent-like 1 [Homo
sapiens]
Length = 258
Score = 82.4 bits (202), Expect = 4e-16
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 20/200 (10%)
Query: 93 TILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQK--------RFF 144
T+++G +G PG G PG G G G PGP G G+KGE G PG P
Sbjct: 63 TLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPPGLPGAGGSGAISTA 122
Query: 145 AFSVGRKTALHSG-----EDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNV-- 197
++ + A ++G E ++ L F+ V NL +D A+G+F + G YFF+ +V
Sbjct: 123 TYTTVPRVAFYAGLKNPHEGYEVLKFDDVVTNLGNNYDAASGKFTCNIPGTYFFTYHVLM 182
Query: 198 HSWNYKETYVHIMHNQKEAVILYAQPSERSI-MQSQSVMLDLAYGDRVWVRLFKRQRENA 256
+ + + N + AQ ++++ S SV+L L GD V+++L
Sbjct: 183 RGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKL----DGGK 238
Query: 257 IYSNDFDTYITFSGHLIKAE 276
+ + + Y TFSG +I ++
Sbjct: 239 AHGGNSNKYSTFSGFIIYSD 258
>gi|65301115 C1q and tumor necrosis factor related protein 9 [Homo
sapiens]
Length = 333
Score = 79.0 bits (193), Expect = 4e-15
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 21/195 (10%)
Query: 96 KGDKGDPGPMGLPGYMGR------------EGPQGEPGPQGS---KGDKGEMGSPGAPCQ 140
+G+ G GP GLPG MG GPQGEPG +G KGD+GE G G
Sbjct: 139 RGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLV 198
Query: 141 KRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSW 200
AF+VG + F+++ N +D A G+F + G+Y+F+ ++ +
Sbjct: 199 LPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVF 258
Query: 201 NYKETYVHIMHNQKEAVILYAQPSERSI--MQSQSVMLDLAYGDRVWVRLFKRQRENAIY 258
+ + V ++ N + IL+ + + S S ++L L GD VW+++ +R N ++
Sbjct: 259 S-RNVQVSLVKNGVK--ILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLF 315
Query: 259 SNDFDTYITFSGHLI 273
+ D D TF+G L+
Sbjct: 316 A-DEDDDTTFTGFLL 329
Score = 50.8 bits (120), Expect = 1e-06
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
+G G GP GL G MG +G +GE GPQG KG+KG++G G
Sbjct: 94 RGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTG 134
Score = 48.1 bits (113), Expect = 8e-06
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGS---------KGDKGEMGSPG 136
KGDKGD G G PG G++G GE G +G+ KGD+G GSPG
Sbjct: 49 KGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPG 98
Score = 45.8 bits (107), Expect = 4e-05
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 65 PLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQG 124
P +P H GR A + KGD G+PG G PG G G +GE G G
Sbjct: 31 PGNPGHNGLPGRDGRDGAKGD----------KGDAGEPGRPGSPGKDGTSGEKGERGADG 80
Query: 125 ---SKGDKGEMGSPGAP 138
+KG KG+ GS G+P
Sbjct: 81 KVEAKGIKGDQGSRGSP 97
Score = 45.1 bits (105), Expect = 7e-05
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 99 KGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+G PG G PG+ G G G G +G KGD GE G PG+P
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSP 64
Score = 37.7 bits (86), Expect = 0.011
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
KG++G G + G G +G +G PG G KG G MG G
Sbjct: 73 KGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKG 113
Score = 28.5 bits (62), Expect = 6.8
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 12/38 (31%)
Query: 113 REGPQGEP------------GPQGSKGDKGEMGSPGAP 138
R+G G P G G+KGDKG+ G PG P
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRP 61
>gi|56847616 C1q and tumor necrosis factor related protein 9B [Homo
sapiens]
Length = 333
Score = 77.8 bits (190), Expect = 1e-14
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 17/193 (8%)
Query: 96 KGDKGDPGPMGLPGYMGR------------EGPQGEPGPQGS---KGDKGEMGSPGAPCQ 140
+G+ G GP GLPG MG GPQGEPG +G KGD+GE G G
Sbjct: 139 RGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLV 198
Query: 141 KRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSW 200
AF+VG + F+++ N +D A G+F + G+Y+F+ ++ +
Sbjct: 199 LPKSAFTVGLTVLSKFPSSDVPIKFDKILYNEFNHYDTAVGKFTCHIAGVYYFTYHITVF 258
Query: 201 NYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSN 260
+ + V ++ N + + S S++L L GD +W+++ +R N +++
Sbjct: 259 S-RNVQVSLVKNGVKILHTRDAYVSSEDQASGSIVLQLKLGDEMWLQVTGGERFNGLFA- 316
Query: 261 DFDTYITFSGHLI 273
D D TF+G L+
Sbjct: 317 DEDDDTTFTGFLL 329
Score = 50.8 bits (120), Expect = 1e-06
Identities = 22/41 (53%), Positives = 28/41 (68%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
+G G GP GL G MG +G +GE GPQG KG+KG++G G
Sbjct: 94 RGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTG 134
Score = 48.5 bits (114), Expect = 6e-06
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 9/50 (18%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGS---------KGDKGEMGSPG 136
KGDKGD G G PG G++G GE G +G+ KGD+G GSPG
Sbjct: 49 KGDKGDAGEPGCPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPG 98
Score = 45.4 bits (106), Expect = 5e-05
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Query: 65 PLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQG 124
P +P H GR A + KGD G+PG G PG G G +GE G G
Sbjct: 31 PGNPGHNGLPGRDGRDGAKGD----------KGDAGEPGCPGSPGKDGTSGEKGERGADG 80
Query: 125 ---SKGDKGEMGSPGAP 138
+KG KG+ GS G+P
Sbjct: 81 KVEAKGIKGDQGSRGSP 97
Score = 45.1 bits (105), Expect = 7e-05
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 99 KGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+G PG G PG+ G G G G +G KGD GE G PG+P
Sbjct: 25 QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCPGSP 64
Score = 37.7 bits (86), Expect = 0.011
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
KG++G G + G G +G +G PG G KG G MG G
Sbjct: 73 KGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKG 113
Score = 28.9 bits (63), Expect = 5.2
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 12/38 (31%)
Query: 113 REGPQGEP------------GPQGSKGDKGEMGSPGAP 138
R+G G P G G+KGDKG+ G PG P
Sbjct: 24 RQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGCP 61
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 75.5 bits (184), Expect = 5e-14
Identities = 69/249 (27%), Positives = 103/249 (41%), Gaps = 47/249 (18%)
Query: 68 PAHVSSASSSGRPHALPEIRPYIN---ITILKGDKGDPGPMGLPG-----YMGREGPQGE 119
P H A G P +P R I I G KGDPG G PG G GP G
Sbjct: 433 PGHNGEAGPRGAP-GIPGTRGPIGPPGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGP 491
Query: 120 PGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHSGED-------------------- 159
PGP G +G GE G PG P +V + + +G+
Sbjct: 492 PGPPGPRGHSGEPGLPGPPGPPGPPGQAVMPEGFIKAGQRPSLSGTPLVSANQGVTGMPV 551
Query: 160 --FQTLL------------FERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKET 205
F +L F+++ N +D TG F + GIY+FS +VH
Sbjct: 552 SAFTVILSKAYPAIGTPIPFDKILYNRQQHYDPRTGIFTCQIPGIYYFSYHVHV-KGTHV 610
Query: 206 YVHIMHNQKEAVILYAQPSERSIMQ-SQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDT 264
+V + N + Y + ++ + Q S S ++DL D+VW++L N +YS+++
Sbjct: 611 WVGLYKNGTPVMYTYDEYTKGYLDQASGSAIIDLTENDQVWLQL-PNAESNGLYSSEY-V 668
Query: 265 YITFSGHLI 273
+ +FSG L+
Sbjct: 669 HSSFSGFLV 677
Score = 52.4 bits (124), Expect = 4e-07
Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 65 PLDPAHVSSASSSGRPHALPEIRPY-----INITILKGDKGDPGPMGLPGYMG------- 112
P P+ V G P E PY + L G +G PGP G+PG G
Sbjct: 99 PPGPSAVGKPGVPGLPGKPGERGPYGPKGDVGPAGLPGPRGPPGPPGIPGPAGISVPGKP 158
Query: 113 -REGPQGEPGPQGSKGDKGEMGSPGAPCQK 141
++GP G PGP+G G+KG G PG QK
Sbjct: 159 GQQGPTGAPGPRGFPGEKGAPGVPGMNGQK 188
Score = 52.0 bits (123), Expect = 6e-07
Identities = 24/46 (52%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 96 KGDKGDPGPMGLPGYMGR---EGPQGEPGPQGSKGDKGEMGSPGAP 138
KG++G PG G PGY G+ +GP+G PG G KGD G G PG P
Sbjct: 376 KGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPKGDPGVGGPPGLP 421
Score = 50.1 bits (118), Expect = 2e-06
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+ G G+ GP G PG G GP G PG G G KG+ GSPG P
Sbjct: 432 MPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSKGDPGSPGPP 475
Score = 49.7 bits (117), Expect = 3e-06
Identities = 23/40 (57%), Positives = 24/40 (60%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G KG+ GP GLPG G GP G GPQG KG G G PG
Sbjct: 320 GAKGEQGPAGLPGKPGLTGPPGNMGPQGPKGIPGSHGLPG 359
Score = 48.1 bits (113), Expect = 8e-06
Identities = 22/43 (51%), Positives = 26/43 (60%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+G KG PG GLPG G GP G G G+KG++G GS G P
Sbjct: 346 QGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKP 388
Score = 47.4 bits (111), Expect = 1e-05
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGS---KGDKGEMGSPGA 137
G+ G GP G+PG G GP+GE GP G G KGE GSPG+
Sbjct: 341 GNMGPQGPKGIPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGS 384
Score = 47.0 bits (110), Expect = 2e-05
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+KGD+G PG MG G G +GP GE GP+G G G G+PG P
Sbjct: 233 IKGDRGFPGEMGPIGPPGPQGPPGERGPEGI-GKPGAAGAPGQP 275
Score = 47.0 bits (110), Expect = 2e-05
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 73 SASSSGRPHALPEIRPYINITILKGDKGDPG--PMGLPGYMGREGPQGEPGPQGSKGDKG 130
+A + G+P +P + + G G PG GLPG G GP G PG G+KG++G
Sbjct: 268 AAGAPGQP-GIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAKGEQG 326
Query: 131 EMGSPGAP 138
G PG P
Sbjct: 327 PAGLPGKP 334
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/44 (50%), Positives = 24/44 (54%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
L G KGDPG G PG G GP G G G G+ G G+PG P
Sbjct: 405 LPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAPGIP 448
Score = 45.4 bits (106), Expect = 5e-05
Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQK 141
L G G G G+PG+ G GP+G PG G++G G G PG P K
Sbjct: 420 LPGPVGPAGAKGMPGHNGEAGPRGAPGIPGTRGPIGPPGIPGFPGSK 466
Score = 44.7 bits (104), Expect = 9e-05
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGP--QGSKGDKGEMGSPGAP 138
++G++G PGP G G G GP G PG GS G +GE G PG P
Sbjct: 55 VRGEQGTPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPP 100
Score = 43.9 bits (102), Expect = 2e-04
Identities = 21/40 (52%), Positives = 23/40 (57%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G PG G PG MG +GP+G PG G G KGE G G
Sbjct: 329 GLPGKPGLTGPPGNMGPQGPKGIPGSHGLPGPKGETGPAG 368
Score = 42.4 bits (98), Expect = 5e-04
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGE--MGSPGA 137
G G PG G G+ G GP G PGPQG G++G +G PGA
Sbjct: 226 GVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGA 268
Score = 42.4 bits (98), Expect = 5e-04
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
LKG++G G G PG G +GP G PG G G G MG G
Sbjct: 306 LKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQG 347
Score = 42.4 bits (98), Expect = 5e-04
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGE------MGSPGAPCQK 141
L G KG+ GP G GY G +G +G PG G G G+ G+PG P K
Sbjct: 357 LPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNPGLPGPK 409
Score = 41.6 bits (96), Expect = 8e-04
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRF 143
G G PG GLPG G GP G PG G +G+ G G PG + F
Sbjct: 194 GAPGRPGERGLPGPQGPTGPSGPPG-VGKRGENGVPGQPGIKGDRGF 239
Score = 41.6 bits (96), Expect = 8e-04
Identities = 23/46 (50%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSK---GDKGEMGSPGAP 138
KG+ G PGP G PG G G G GP G+K G GE G GAP
Sbjct: 400 KGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGAP 445
Score = 40.8 bits (94), Expect = 0.001
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 95 LKGDKGDPGPMGLPGY--MGREGPQGEPGPQGSKGDKGEMGSPGAP 138
L G +G GP G PG G G G+PG +G +G GEMG G P
Sbjct: 204 LPGPQGPTGPSGPPGVGKRGENGVPGQPGIKGDRGFPGEMGPIGPP 249
Score = 38.5 bits (88), Expect = 0.007
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+ G G PGP G G GP G PG +G +G G G PG P
Sbjct: 351 IPGSHGLPGP---KGETGPAGPAGYPGAKGERGSPGSDGKPGYP 391
Score = 37.0 bits (84), Expect = 0.019
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 11/56 (19%)
Query: 97 GDKGDPGPMGLPGYMGREGPQ-----------GEPGPQGSKGDKGEMGSPGAPCQK 141
G G PG G+PG G G G+PG G KG++G G PG P K
Sbjct: 267 GAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLPGLKGERGPAGLPGGPGAK 322
Score = 36.6 bits (83), Expect = 0.025
Identities = 17/41 (41%), Positives = 21/41 (51%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
+G+ G PG G+ G G G G GP G +G GE G G
Sbjct: 222 RGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERGPEG 262
Score = 36.6 bits (83), Expect = 0.025
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 96 KGDKGDPGPMGL--PGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+G G+ GP G+ PG G G G PG +G G G G PG P
Sbjct: 252 QGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPP 296
Score = 35.8 bits (81), Expect = 0.042
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G G GP G PG G +G G GP G G G G+ G P
Sbjct: 392 GKPGLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMP 433
Score = 34.7 bits (78), Expect = 0.094
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 96 KGDKGDPGPMGLPGY-----MGREGPQGEPGPQGSKGDKGEMGSPGAPCQK 141
+G G GP G PGY G G G PGP + G G G PG P ++
Sbjct: 71 RGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGP-SAVGKPGVPGLPGKPGER 120
Score = 34.3 bits (77), Expect = 0.12
Identities = 17/40 (42%), Positives = 20/40 (50%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G +G+ G G PG G G GE GP G G +G G G
Sbjct: 220 GKRGENGVPGQPGIKGDRGFPGEMGPIGPPGPQGPPGERG 259
Score = 34.3 bits (77), Expect = 0.12
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 100 GDPGPMGLPGYMGREGPQGEPGPQGSKGDKGE--MGSPGAP 138
G PG G PG G G +G PG G G G G PG P
Sbjct: 264 GKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGPPGFGKPGLP 304
Score = 33.1 bits (74), Expect = 0.27
Identities = 18/40 (45%), Positives = 18/40 (45%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G G GLPG G G G PG G G G G PG
Sbjct: 395 GLDGPKGNPGLPGPKGDPGVGGPPGLPGPVGPAGAKGMPG 434
>gi|148233912 C1q and tumor necrosis factor related protein 4 [Homo
sapiens]
Length = 329
Score = 75.5 bits (184), Expect = 5e-14
Identities = 61/146 (41%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 135 PGAPCQKRFFAFSVGRKTALHS-----GEDFQTLLFERVFVNLDGCFDMATGQFAAPLRG 189
P AP + R AFS R +L G Q L F+ FVN+ G FD A G F L G
Sbjct: 169 PPAPPEPRS-AFSAARTRSLVGSDAGPGPRHQPLAFDTEFVNIGGDFDAAAGVFRCRLPG 227
Query: 190 IYFFSLNVHSWNYKETYVHIMHNQKE--AVILYAQPSERSIMQSQSVMLDLAYGDRVWVR 247
YFFS + K V +M N+ E A+I S R MQSQSVML L GD VW+
Sbjct: 228 AYFFSFTLGKLPRKTLSVKLMKNRDEVQAMIYDDGASRRREMQSQSVMLALRRGDAVWLL 287
Query: 248 LFKRQRENAIYSNDFDTYITFSGHLI 273
A YSN YITFSG L+
Sbjct: 288 SHDHDGYGA-YSN-HGKYITFSGFLV 311
Score = 74.7 bits (182), Expect = 8e-14
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 9/148 (6%)
Query: 134 SPGAPCQKRFFAFSVGRKTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFF 193
+PG + AFS R T L G + F++V+VN+ G FD+ATGQF + G YFF
Sbjct: 20 TPGPGSSELRSAFSAARTTPLE-GTSEMAVTFDKVYVNIGGDFDVATGQFRCRVPGAYFF 78
Query: 194 SLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQ---SQSVMLDLAYGDRVWVRLFK 250
S +K V ++ N+ E L R + SQS ML L YGD VW+RL
Sbjct: 79 SFTAGKAPHKSLSVMLVRNRDEVQALAFDEQRRPGARRAASQSAMLQLDYGDTVWLRLHG 138
Query: 251 RQRENAIYSNDFDTYITFSGHLIKAEDD 278
+ A+ + TFSG+L+ A+ D
Sbjct: 139 AP-QYALGAPG----ATFSGYLVYADAD 161
>gi|56786155 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 75.1 bits (183), Expect = 6e-14
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 80 PHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPC 139
P P I I KG KG+PG G PG G GP G PG G G GE G G
Sbjct: 56 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK 115
Query: 140 QKRFFAFSVGRKTALHSGEDFQTLL-FERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVH 198
QK F+V R+T H +L+ F V N G +D +TG+F + G+Y+F H
Sbjct: 116 QKFQSVFTVTRQT--HQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFV--YH 171
Query: 199 SWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWV 246
+ + V + + + V S+ + + S V+L L G+ VW+
Sbjct: 172 ASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWL 219
>gi|166235903 complement component 1, q subcomponent, C chain
precursor [Homo sapiens]
Length = 245
Score = 75.1 bits (183), Expect = 6e-14
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 5/168 (2%)
Query: 80 PHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPC 139
P P I I KG KG+PG G PG G GP G PG G G GE G G
Sbjct: 56 PKGEPGIPAIPGIRGPKGQKGEPGLPGHPGKNGPMGPPGMPGVPGPMGIPGEPGEEGRYK 115
Query: 140 QKRFFAFSVGRKTALHSGEDFQTLL-FERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVH 198
QK F+V R+T H +L+ F V N G +D +TG+F + G+Y+F H
Sbjct: 116 QKFQSVFTVTRQT--HQPPAPNSLIRFNAVLTNPQGDYDTSTGKFTCKVPGLYYFV--YH 171
Query: 199 SWNYKETYVHIMHNQKEAVILYAQPSERSIMQSQSVMLDLAYGDRVWV 246
+ + V + + + V S+ + + S V+L L G+ VW+
Sbjct: 172 ASHTANLCVLLYRSGVKVVTFCGHTSKTNQVNSGGVLLRLQVGEEVWL 219
>gi|14149712 C1q and tumor necrosis factor related protein 5
precursor [Homo sapiens]
Length = 243
Score = 73.9 bits (180), Expect = 1e-13
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 11/185 (5%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHS 156
G G PG G G G GP+G+PGP+G G G G G AFS R +
Sbjct: 57 GAPGAPGEKGEGGRPGLPGPRGDPGPRGEAGPAGPTGPAGECSVPPRSAFSAKRSESRVP 116
Query: 157 GEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEA 216
L F+RV VN G +D TG+F + G+Y+F+ VH+ Y+ + + E+
Sbjct: 117 PPSDAPLPFDRVLVNEQGHYDAVTGKFTCQVPGVYYFA--VHATVYRASLQFDLVKNGES 174
Query: 217 VILYAQ-----PSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGH 271
+ + Q P S+ S M+ L D+VWV++ IY++ T TFSG
Sbjct: 175 IASFFQFFGGWPKPASL--SGGAMVRLEPEDQVWVQVGVGD-YIGIYAS-IKTDSTFSGF 230
Query: 272 LIKAE 276
L+ ++
Sbjct: 231 LVYSD 235
>gi|122937273 hypothetical protein LOC131149 [Homo sapiens]
Length = 477
Score = 70.9 bits (172), Expect = 1e-12
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 17/190 (8%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGE------PGPQGSKGDKGEMGSPGAPCQKRFFAFSVGR 150
G KG+ G +G PG +G GP+G+ GP G KG +G GS G + AFS G
Sbjct: 290 GIKGEKGELGPPGLLGPTGPKGDIGNKGVRGPTGKKGSRGFKGSKGELARVPRSAFSAGL 349
Query: 151 KTALHSGEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIM 210
+ FE++ N G + TG+F + G Y FS ++ +
Sbjct: 350 SKPFPPPN--IPIKFEKILYNDQGNYSPVTGKFNCSIPGTYVFSYHITVRGRPARISLVA 407
Query: 211 HNQKE---AVILYAQPSERSIMQSQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYIT 267
N+K+ LY Q +++ S V+L L+ GD+VW+ + K N +Y + D I
Sbjct: 408 QNKKQFKSRETLYGQEIDQA---SLLVILKLSAGDQVWLEVSKDW--NGVYVSAEDDSI- 461
Query: 268 FSGHLIKAED 277
F+G L+ E+
Sbjct: 462 FTGFLLYPEE 471
Score = 55.1 bits (131), Expect = 7e-08
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 6/50 (12%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGD------KGEMGSPGAPC 139
KG KG+ G G+PGY G+ G QGEPGP+G KG+ KG+ GS G C
Sbjct: 151 KGLKGERGDQGVPGYPGKPGAQGEPGPKGDKGNIGLGGVKGQKGSKGDTC 200
Score = 47.0 bits (110), Expect = 2e-05
Identities = 21/41 (51%), Positives = 25/41 (60%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
KG+KGD G MG PG G G +GE G G KG+ G+ G G
Sbjct: 205 KGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKGEMGDKGCCG 245
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G KG+ G MG G MG +G G+ G +G KG KGE G G
Sbjct: 224 GAKGEKGEMGEKGEMGDKGCCGDSGERGGKGQKGEGGMKG 263
Score = 40.4 bits (93), Expect = 0.002
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
KG+ GD G G G G +G +GE G +G KG KG+ G G
Sbjct: 235 KGEMGDKGCCGDSGERGGKGQKGEGGMKGEKGSKGDSGMEG 275
Score = 39.3 bits (90), Expect = 0.004
Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
Query: 56 CQRCCDSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREG 115
C C E D + S G P A E KG+ G+ G MG G G G
Sbjct: 200 CGNCTKGEKG-DQGAMGSPGLHGGPGAKGE----------KGEMGEKGEMGDKGCCGDSG 248
Query: 116 PQGEPGPQGSKGDKGEMGSPG 136
+G G +G G KGE GS G
Sbjct: 249 ERGGKGQKGEGGMKGEKGSKG 269
Score = 38.1 bits (87), Expect = 0.009
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G+KG+ G G G G G +G+ G G KG+KG G G
Sbjct: 233 GEKGEMGDKGCCGDSGERGGKGQKGEGGMKGEKGSKGDSG 272
Score = 36.2 bits (82), Expect = 0.032
Identities = 20/44 (45%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGS---KGDKGEMGSPG 136
KG KGD G G +G G PG G KG+KGEMG G
Sbjct: 193 KGSKGDTCGNCTKGEKGDQGAMGSPGLHGGPGAKGEKGEMGEKG 236
>gi|32964830 collagen, type VIII, alpha 2 [Homo sapiens]
Length = 703
Score = 68.2 bits (165), Expect = 8e-12
Identities = 62/223 (27%), Positives = 91/223 (40%), Gaps = 48/223 (21%)
Query: 95 LKGDKGDPGP-----MGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFF----- 144
LKG+ G PGP G PG G GP G PG G G G G PG P F
Sbjct: 482 LKGEPGLPGPPGEGRAGEPGTAGPTGPPGVPGSPGITGPPGPPGPPGPPGAPGAFDETGI 541
Query: 145 ---------------------AFSVGRKTALHSGEDFQTLL------------FERVFVN 171
F +G +A H+ F +L F+R N
Sbjct: 542 AGLHLPNGGVEGAVLGKGGKPQFGLGELSA-HATPAFTAVLTSPFPASGMPVKFDRTLYN 600
Query: 172 LDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEAVILYAQPSERSIMQ- 230
++ ATG F P+ G+Y+F+ +VH +V + N A Y + + + Q
Sbjct: 601 GHSGYNPATGIFTCPVGGVYYFAYHVHV-KGTNVWVALYKNNVPATYTYDEYKKGYLDQA 659
Query: 231 SQSVMLDLAYGDRVWVRLFKRQRENAIYSNDFDTYITFSGHLI 273
S +L L D+VWV++ + N +YS ++ + +FSG L+
Sbjct: 660 SGGAVLQLRPNDQVWVQM-PSDQANGLYSTEY-IHSSFSGFLL 700
Score = 50.4 bits (119), Expect = 2e-06
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 5/44 (11%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGE--MGSPGAP 138
G +G PGP PG+ G GPQGEPGP G +G KG+ +G PG P
Sbjct: 176 GAQGVPGP---PGFQGEPGPQGEPGPPGDRGLKGDNGVGQPGLP 216
Score = 48.9 bits (115), Expect = 5e-06
Identities = 22/44 (50%), Positives = 26/44 (59%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
L G KGD GP G+PG +G G GE G G +G +G G PG P
Sbjct: 320 LPGPKGDRGPAGVPGLLGDRGEPGEDGEPGEQGPQGLGGPPGLP 363
Score = 47.0 bits (110), Expect = 2e-05
Identities = 27/57 (47%), Positives = 28/57 (49%), Gaps = 13/57 (22%)
Query: 95 LKGDKG--DPGPMGLPGYMGREGPQGEPGP-----------QGSKGDKGEMGSPGAP 138
LKGD G PG G PG G GP G PGP G+ GDKGE G PG P
Sbjct: 204 LKGDNGVGQPGLPGAPGQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVP 260
Score = 45.8 bits (107), Expect = 4e-05
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 68 PAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGE-------- 119
P + G P +P IR + L G G PG GLPG G GP G
Sbjct: 374 PPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGERGLPGAHGPPGPTGPKGEPGFTG 433
Query: 120 ----PGPQGSKGDKGEMGSPGAP 138
PG G+ G KG++G PG P
Sbjct: 434 RPGGPGVAGALGQKGDLGLPGQP 456
Score = 45.8 bits (107), Expect = 4e-05
Identities = 26/50 (52%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 96 KGDKGDPGPMGL---PGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKR 142
KGD G PG GL G G +GP G GPQG G KGE G PG P + R
Sbjct: 447 KGDLGLPGQPGLRGPSGIPGLQGPAGPIGPQGLPGLKGEPGLPGPPGEGR 496
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 17/59 (28%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGE-----------------PGPQGSKGDKGEMGSPGAP 138
GDKG+ GP G+PG G G G PGPQG G KGE G+ G P
Sbjct: 249 GDKGESGPPGVPGPRGEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPP 307
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/42 (50%), Positives = 24/42 (57%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
L GD+G+PG G PG G +G G PG GS G G G PG
Sbjct: 335 LLGDRGEPGEDGEPGEQGPQGLGGPPGLPGSAGLPGRRGPPG 376
Score = 43.5 bits (101), Expect = 2e-04
Identities = 23/56 (41%), Positives = 28/56 (50%), Gaps = 9/56 (16%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGP---------QGSKGDKGEMGSPGAPCQK 141
L G G PG GLPG G GP+GE GP +G +G G G PG P ++
Sbjct: 356 LGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPGIRGDQGPSGLAGKPGVPGER 411
Score = 43.1 bits (100), Expect = 3e-04
Identities = 20/41 (48%), Positives = 24/41 (58%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
+G +G GP GLPG G G +G PGP+G G G G PG
Sbjct: 351 QGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVPG 391
Score = 42.7 bits (99), Expect = 3e-04
Identities = 21/42 (50%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 97 GDKGDPGPMGLPGY--MGREGPQGEPGPQGSKGDKGEMGSPG 136
G G PGP G PG+ MG+ GP G PG G G G G PG
Sbjct: 106 GLHGQPGPAGPPGFSRMGKAGPPGLPGKVGPPGQPGLRGEPG 147
Score = 42.7 bits (99), Expect = 3e-04
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 97 GDKGDPGPMGL---PGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G+ G+ GP GL PG G G G GP G KG+ G G PG P
Sbjct: 346 GEPGEQGPQGLGGPPGLPGSAGLPGRRGPPGPKGEAGPGGPPGVP 390
Score = 42.4 bits (98), Expect = 5e-04
Identities = 33/86 (38%), Positives = 37/86 (43%), Gaps = 25/86 (29%)
Query: 80 PHALPEIRPYINITILKGDKGDPGPMGLPG--------------YMGREGPQGEPGPQGS 125
P P +R I +G +G PGP GLPG G G QGEPGPQG
Sbjct: 136 PPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGAQGVPGPPGFQGEPGPQGE 195
Query: 126 ---------KGDK--GEMGSPGAPCQ 140
KGD G+ G PGAP Q
Sbjct: 196 PGPPGDRGLKGDNGVGQPGLPGAPGQ 221
Score = 42.4 bits (98), Expect = 5e-04
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 97 GDKGDPGPMGLPGY--MGREGPQGEPGPQGSKGDKGEMGSPG 136
G G PGP GLPG +G+ G G PG G KG+ G G PG
Sbjct: 220 GQGGAPGPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPG 261
Score = 42.4 bits (98), Expect = 5e-04
Identities = 20/40 (50%), Positives = 21/40 (52%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G GP G PG+ GR G G G G KGD G G PG
Sbjct: 418 GPPGPTGPKGEPGFTGRPGGPGVAGALGQKGDLGLPGQPG 457
Score = 40.8 bits (94), Expect = 0.001
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 100 GDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G GP GLPG +G G G G G +GD+G G PG P
Sbjct: 123 GKAGPPGLPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPP 161
Score = 40.8 bits (94), Expect = 0.001
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 11/51 (21%)
Query: 97 GDKGDPGPMGL-----------PGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G PGP GL PG G GP G PGP+G G G G PG
Sbjct: 226 GPPGLPGPAGLGKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPPG 276
Score = 40.4 bits (93), Expect = 0.002
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 97 GDKGDPGPMG--------LPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G +G PG +G LPG G GP G PG G +G+ GE G PG
Sbjct: 302 GTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEPG 349
Score = 40.0 bits (92), Expect = 0.002
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 100 GDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G PG GLPG G +G G PG G +G+ G +G G P
Sbjct: 237 GKPGLDGLPGAPGDKGESGPPGVPGPRGEPGAVGPKGPP 275
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
Query: 97 GDKGDPGP--MGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G KG PG +G+PG G GPQ GP G+KG+ G G PG
Sbjct: 270 GPKGPPGVDGVGVPGAAGLPGPQ---GPSGAKGEPGTRGPPG 308
Score = 39.7 bits (91), Expect = 0.003
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
Query: 95 LKGDKGDP------GPMGLPGY-----MGREGPQGEPGPQGSKG--DKGEMGSPGAP 138
LKG+ G P GP G PG+ MG+ G G+PGP G G G+ G PG P
Sbjct: 75 LKGEPGPPGKPGPRGPPGPPGFPGKPGMGKPGLHGQPGPAGPPGFSRMGKAGPPGLP 131
Score = 38.9 bits (89), Expect = 0.005
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 11/53 (20%)
Query: 97 GDKGDPGPMGLPGYMGREG--------PQGEPGPQGSKG---DKGEMGSPGAP 138
G KG+PG G PG +G G P+G+ GP G G D+GE G G P
Sbjct: 296 GAKGEPGTRGPPGLIGPTGYGMPGLPGPKGDRGPAGVPGLLGDRGEPGEDGEP 348
Score = 38.1 bits (87), Expect = 0.009
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEM--GSPGA 137
G G PG G PG G +G +G PGP G G G G PGA
Sbjct: 135 GPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKPGA 177
Score = 38.1 bits (87), Expect = 0.009
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 100 GDPGPMGLPGYMGREGPQGEPGPQGSKGDKGE--MGSPGAPCQK 141
G PG GLPG G G +GEPG +G G G G PG P K
Sbjct: 281 GVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGPK 324
Score = 37.4 bits (85), Expect = 0.015
Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G G PG +G P G+ G +GEPG +G +G +G G PG P
Sbjct: 126 GPPGLPGKVGPP---GQPGLRGEPGIRGDQGLRGPPGPPGLP 164
Score = 37.0 bits (84), Expect = 0.019
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 78 GRPHAL-PEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGE-----------PGPQGS 125
G P A+ P+ P ++ + G G PGP G G G G +G PG G
Sbjct: 264 GEPGAVGPKGPPGVDGVGVPGAAGLPGPQGPSGAKGEPGTRGPPGLIGPTGYGMPGLPGP 323
Query: 126 KGDKGEMGSPG 136
KGD+G G PG
Sbjct: 324 KGDRGPAGVPG 334
Score = 36.6 bits (83), Expect = 0.025
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKG--EMGSPGA 137
L G GD G G PG GP+GEPG G KG G +G PGA
Sbjct: 244 LPGAPGDKGESGPPGV---PGPRGEPGAVGPKGPPGVDGVGVPGA 285
Score = 33.9 bits (76), Expect = 0.16
Identities = 21/46 (45%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMG--SPGAP 138
L G G PG GL G G G QG GP G G G G PG P
Sbjct: 130 LPGKVGPPGQPGLRGEPGIRGDQGLRGPPGPPGLPGPSGITIPGKP 175
Score = 32.7 bits (73), Expect = 0.36
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Query: 96 KGDKGDPGPMGLPGYMGREGP------QGEPGPQGSKGDKGEMGSPGAP 138
KG G P G Y+ P +GEPGP G G +G G PG P
Sbjct: 49 KGPVGPPFREGKGQYLEMPLPLLPMDLKGEPGPPGKPGPRGPPGPPGFP 97
>gi|5901944 elastin microfibril interfacer 1 [Homo sapiens]
Length = 1016
Score = 68.2 bits (165), Expect = 8e-12
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHS 156
G +G PGP G PG G++G +G GP G +G++G G+P AP + F+ ++ +
Sbjct: 826 GLQGPPGPAGPPGSPGKDGQEGPIGPPGPQGEQGVEGAPAAPVPQVAFSAALSLPRS--- 882
Query: 157 GEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFS 194
+ T+ F+RV +N G +D TG F APL G Y S
Sbjct: 883 --EPGTVPFDRVLLNDGGYYDPETGVFTAPLAGRYLLS 918
>gi|87298828 complement component 1, q subcomponent, B chain
precursor [Homo sapiens]
Length = 253
Score = 66.6 bits (161), Expect = 2e-11
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 12/172 (6%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQKRFFAFSVGRKTALHS 156
G+KGDPG G PG +G +GP G G G+ G G G G + AFS R +
Sbjct: 75 GEKGDPGIPGNPGKVGPKGPMGPKGGPGAPGAPGPKGESGDYKATQKIAFSATRTINVPL 134
Query: 157 GEDFQTLLFERVFVNLDGCFDMATGQFAAPLRGIYFFSLNVHSWNYKETYVHIMHNQKEA 216
D QT+ F+ V N++ ++ +G+F + G+Y+F+ H+ + V++M ++ A
Sbjct: 135 RRD-QTIRFDHVITNMNNNYEPRSGKFTCKVPGLYYFT--YHASSRGNLCVNLMRGRERA 191
Query: 217 --VILYAQPSERSI-MQSQSVMLDLAYGDRVWVR------LFKRQRENAIYS 259
V+ + + + + + ++L L G+ V+++ L + N+I+S
Sbjct: 192 QKVVTFCDYAYNTFQVTTGGMVLKLEQGENVFLQATDKNSLLGMEGANSIFS 243
>gi|100913220 alpha 1 type XVI collagen precursor [Homo sapiens]
Length = 1604
Score = 60.8 bits (146), Expect = 1e-09
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 61 DSEDPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGP---MGLPGYMGREGPQ 117
D +P P ++G P LP I+ T G+KG+PGP GLPG G GP+
Sbjct: 1079 DKGEPGPPGQPGYPGATGPP-GLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPR 1137
Query: 118 GEPGPQGSKGDKGEMGSPGAP 138
GE GPQG+ G+KG+ G G P
Sbjct: 1138 GERGPQGNSGEKGDQGFQGQP 1158
Score = 58.5 bits (140), Expect = 6e-09
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 83 LPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSK---GDKGEMGSPGAP 138
LP ++ +T L GDKG+PGP G PGY G GP G PG +G + G GE G PG P
Sbjct: 1064 LPGLQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPP 1122
Score = 54.7 bits (130), Expect = 9e-08
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 65 PLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQG 124
P P HV G+P I+ LKGD+G G GL G G+ GP G PGP G
Sbjct: 1287 PGPPGHVGPPGPPGQPGPAG-----ISAVGLKGDRGATGERGLAGLPGQPGPPGHPGPPG 1341
Query: 125 SKGDKGEMGSPGAPCQKRFF 144
G G G G P ++ F+
Sbjct: 1342 EPGTDGAAGKEGPPGKQGFY 1361
Score = 53.5 bits (127), Expect = 2e-07
Identities = 33/78 (42%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 67 DPAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSK 126
DP V S G P LP R ++G G PGP+G PG+ G G G PG QG +
Sbjct: 1013 DPGCVGSPGLPGPP-GLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGER 1071
Query: 127 ------GDKGEMGSPGAP 138
GDKGE G PG P
Sbjct: 1072 GLTGLTGDKGEPGPPGQP 1089
Score = 51.6 bits (122), Expect = 7e-07
Identities = 22/43 (51%), Positives = 28/43 (65%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGA 137
++G +G+PG GLPG G GP+G PGP G KG +G G GA
Sbjct: 789 VQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGA 831
Score = 51.2 bits (121), Expect = 1e-06
Identities = 24/44 (54%), Positives = 25/44 (56%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPC 139
KGD G+PG G PG GR G GEPG QG G KGE G C
Sbjct: 684 KGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDGCTAC 727
Score = 50.1 bits (118), Expect = 2e-06
Identities = 24/45 (53%), Positives = 25/45 (55%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQ 140
KGD G PGP G G G EG G GPQG G G +G PG P Q
Sbjct: 1257 KGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPPGQ 1301
Score = 48.9 bits (115), Expect = 5e-06
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G+KG+PGP G G G++G GE G +G KGD G G PG P
Sbjct: 656 GEKGEPGPPGF-GLPGKQGKAGERGLKGQKGDAGNPGDPGTP 696
Score = 48.9 bits (115), Expect = 5e-06
Identities = 22/42 (52%), Positives = 26/42 (61%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G +GDPGP G PG MG G +G+ G G G KG+ G PG P
Sbjct: 1225 GLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPP 1266
Score = 48.5 bits (114), Expect = 6e-06
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+G G PGP G PG+ G+ G G PGPQ KG +G G G P
Sbjct: 1155 QGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLP 1197
Score = 48.5 bits (114), Expect = 6e-06
Identities = 30/74 (40%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 68 PAHVSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKG 127
PA +S+ G A E R + G G PGP G PG G G +G PG QG G
Sbjct: 1304 PAGISAVGLKGDRGATGE-RGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYG 1362
Query: 128 DKGEMGSPGAPCQK 141
G G PGA QK
Sbjct: 1363 PPGPKGDPGAAGQK 1376
Score = 47.8 bits (112), Expect = 1e-05
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 68 PAHVSSASSSGRPHALPEIRPYINITILKGDKGDPG-----PMGLPGYMGREGPQGEPGP 122
P V G+P LP ++ + ++G+ G PG P G PG G G QG PGP
Sbjct: 752 PEGVGRPGKPGQP-GLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGP 810
Query: 123 QGSKGDKGEMGSPGAP 138
+G G GE G+ G+P
Sbjct: 811 RGPPGPTGEKGAQGSP 826
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/40 (57%), Positives = 25/40 (62%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G PG GLPG +GREG QG PG +G G KGE G G
Sbjct: 1485 GRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIG 1524
Score = 47.0 bits (110), Expect = 2e-05
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 9/52 (17%)
Query: 96 KGDKGD------PGPMGLPGYMGREGPQGEPGPQ---GSKGDKGEMGSPGAP 138
KGD+G PGP G PG+ G+ G G PGPQ GS+G +G G PG+P
Sbjct: 1149 KGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSP 1200
Score = 46.6 bits (109), Expect = 2e-05
Identities = 30/74 (40%), Positives = 32/74 (43%), Gaps = 22/74 (29%)
Query: 78 GRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEP---------------GP 122
GRP + I P KG KGDPG +G G G GP G P GP
Sbjct: 420 GRPGEICVIGP-------KGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGP 472
Query: 123 QGSKGDKGEMGSPG 136
G KGDKG G PG
Sbjct: 473 PGPKGDKGSSGIPG 486
Score = 46.2 bits (108), Expect = 3e-05
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 95 LKGDKGDPGP---MGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
L+GD G GP MG PG+ G+ G G PGP+G G G GS G P
Sbjct: 1226 LRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRP 1272
Score = 45.8 bits (107), Expect = 4e-05
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 71 VSSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKG 130
VSS +SG + P + L G G PG G G G GP G PGP G G G
Sbjct: 569 VSSTGASGDVGS-----PGFGLPGLPGRAGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAG 623
Query: 131 EMGSPGAPCQ 140
G+ G PC+
Sbjct: 624 IKGAKGEPCE 633
Score = 45.8 bits (107), Expect = 4e-05
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G G GP G G+ G GP+G+PG G KG GE G G P
Sbjct: 1347 GAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMP 1388
Score = 45.4 bits (106), Expect = 5e-05
Identities = 23/44 (52%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGE---PGPQGSKGDKGEMGSPG 136
KG+KGD G G+PG GR+G GE GP+G KGD G +G G
Sbjct: 401 KGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEG 444
Score = 44.7 bits (104), Expect = 9e-05
Identities = 21/43 (48%), Positives = 25/43 (58%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
KG+ G GP GLPG G +G +GE G G KG G+ G G P
Sbjct: 380 KGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRP 422
Score = 44.7 bits (104), Expect = 9e-05
Identities = 24/49 (48%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 90 INITILKGDKGDPGPMGLPGY--MGREGPQGEPGPQGSKGDKGEMGSPG 136
I I G G PGP G PGY MG GP G+ G G G G MG PG
Sbjct: 1525 IGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGIPGIPGPPGPMGQPG 1573
Score = 43.9 bits (102), Expect = 2e-04
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
KG G+ G G+PG G+ G G GP G G++G G+PG
Sbjct: 1376 KGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPG 1416
Score = 43.5 bits (101), Expect = 2e-04
Identities = 24/67 (35%), Positives = 29/67 (43%)
Query: 72 SSASSSGRPHALPEIRPYINITILKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGE 131
S R + I P + +G KG+ G G G G G GE G +G KGD G
Sbjct: 350 SKGEKGARGNDCVRISPDAPLQCAEGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGI 409
Query: 132 MGSPGAP 138
G PG P
Sbjct: 410 KGVPGKP 416
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/40 (50%), Positives = 21/40 (52%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G PGP G PG G GP G PG QG G+ G G PG
Sbjct: 898 GSSWQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPG 937
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G+KG G G PG G GP G PGP G +G G G G+P
Sbjct: 1380 GEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSP 1421
Score = 43.1 bits (100), Expect = 3e-04
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Query: 67 DPAHVSSASSSGRPH--ALPEIRPYINITILKGDKGDP----GPMGLPGYMGREGPQGEP 120
DP V +G P LP P I + GD G P G G G G+EGP G+P
Sbjct: 436 DPGFVGPEGLAGEPGPPGLPG-PPGIGLPGTPGDPGGPPGPKGDKGSSGIPGKEGPGGKP 494
Query: 121 GPQGSKGDKGEMGSPGAPCQ 140
G G KG+KG+ PC+
Sbjct: 495 GKPGVKGEKGD------PCE 508
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/41 (51%), Positives = 23/41 (56%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
KG +G GP GLPG G GP G GP G G G+ G PG
Sbjct: 1185 KGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPG 1225
Score = 42.7 bits (99), Expect = 3e-04
Identities = 23/51 (45%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPG---------PQGSKGDKGEMGSPGAP 138
G KGDPG G G G +G G PG P G G GE G PGAP
Sbjct: 1365 GPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAP 1415
Score = 42.4 bits (98), Expect = 5e-04
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
L G G PGP G+ G G +G G+ G G +GD G G PG
Sbjct: 1196 LPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPG 1237
Score = 41.6 bits (96), Expect = 8e-04
Identities = 22/43 (51%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGA 137
L G +G PGP G PG G +G QG P G KG G +G PGA
Sbjct: 801 LPGIQGLPGPRGPPGPTGEKGAQGSP---GVKGATGPVGPPGA 840
Score = 41.6 bits (96), Expect = 8e-04
Identities = 21/40 (52%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G PG G PG M GPQG PGP G G G G PG
Sbjct: 1267 GSTGRPGAEGEPGAM---GPQGRPGPPGHVGPPGPPGQPG 1303
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 97 GDKGDPGPMGL--PGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQ 140
G KG+ GP G+ PG G+ G G GP G KG +GE G PG Q
Sbjct: 745 GPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQ 790
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGP---QGSKGDKGEMGSPGAP 138
+GD G G GLPG G G +GE GP +GS G G +G PG P
Sbjct: 1011 EGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFP 1056
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 97 GDKGDPGPM------GLPGYMGREGPQGEPGPQ-----GSKGDKGEMGSPG 136
G +G+PG M G PG++G GP G+PGP G KGD+G G G
Sbjct: 1273 GAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERG 1323
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/40 (50%), Positives = 21/40 (52%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G GP+G PG G G G PGP GS G G GS G
Sbjct: 1392 GKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMG 1431
Score = 40.8 bits (94), Expect = 0.001
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
KG G PG G G G+ GP G G G++G+ G MG G P
Sbjct: 1245 KGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRP 1287
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 12/57 (21%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGE------------MGSPGAPCQK 141
G KGD G G+PG G G G+PG +G KGD E +G PG P K
Sbjct: 474 GPKGDKGSSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPK 530
Score = 40.4 bits (93), Expect = 0.002
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 95 LKGDKGDPGP------MGLPGYMGREGPQGEPG-----PQGSKGDKGEMGSPGAPCQK 141
L G +G PGP G PG G GP G PG P G G +G+ G G P +K
Sbjct: 807 LPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEK 864
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 11/55 (20%)
Query: 97 GDKGDPGPMGLPGYM-----GREGPQGE------PGPQGSKGDKGEMGSPGAPCQ 140
G KG GP+G PG GR+G QG+ PG +G +G+KGE G P Q
Sbjct: 827 GVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQ 881
Score = 39.7 bits (91), Expect = 0.003
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 95 LKGDKGDPGPMGLPG---YMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
+KG G PG G PG +G +G +G+PG G +G GE G PG P
Sbjct: 409 IKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLP 455
Score = 39.7 bits (91), Expect = 0.003
Identities = 29/79 (36%), Positives = 35/79 (44%), Gaps = 10/79 (12%)
Query: 65 PLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGD-----PGPMGLPGYMGREGPQGE 119
P P GR LP +R + KG+KGD G GLPG G +GP G
Sbjct: 1490 PGSPGLPGQIGREGR-QGLPGVR---GLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGY 1545
Query: 120 PGPQGSKGDKGEMGSPGAP 138
G G+ G G+ G PG P
Sbjct: 1546 -GKMGATGPMGQQGIPGIP 1563
Score = 39.3 bits (90), Expect = 0.004
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G G PG +G P G GPQ E G +G +G G GSPG P
Sbjct: 1165 GPPGFPGKVGSP---GPPGPQAEKGSEGIRGPSGLPGSPGPP 1203
Score = 39.3 bits (90), Expect = 0.004
Identities = 19/42 (45%), Positives = 20/42 (47%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G G PGP G G G G G PG +G G G G PG P
Sbjct: 1249 GHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPP 1290
Score = 39.3 bits (90), Expect = 0.004
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
G G PG G G +G GP GE G G+ G G G PG P
Sbjct: 1386 GMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVP 1427
Score = 38.9 bits (89), Expect = 0.005
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
KG KG+ G G+ G G+ G G PG G KG+ G PG
Sbjct: 398 KGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPG 438
Score = 38.1 bits (87), Expect = 0.009
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 16/61 (26%)
Query: 95 LKGDKGDP---------GPMGLPGYMGREGPQGEPG-PQGSKGD------KGEMGSPGAP 138
+KG+KGDP G G G+ GP+GEPG P ++GD KGE G P
Sbjct: 499 VKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPARGDPGIQGIKGEKGEPCLS 558
Query: 139 C 139
C
Sbjct: 559 C 559
Score = 38.1 bits (87), Expect = 0.009
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 17/84 (20%)
Query: 64 DPLDPAHVSSASSSGRPHALPEIRPYINITILKGDKGD-----PGPMG----LPGYMGRE 114
DP P SG P P KG+KGD P G + G G+
Sbjct: 692 DPGTPGTTGRPGLSGEPGVQGPAGP-------KGEKGDGCTACPSLQGTVTDMAGRPGQP 744
Query: 115 GPQGEPGPQGSKGDKGEMGSPGAP 138
GP+GE GP+G G G+ G PG P
Sbjct: 745 GPKGEQGPEG-VGRPGKPGQPGLP 767
Score = 38.1 bits (87), Expect = 0.009
Identities = 17/36 (47%), Positives = 19/36 (52%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEM 132
G G PGP G G+ G GP G PG G G G+M
Sbjct: 1398 GPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDM 1433
Score = 38.1 bits (87), Expect = 0.009
Identities = 18/37 (48%), Positives = 19/37 (51%)
Query: 100 GDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G PGP G G GR G G PG G G +G G PG
Sbjct: 1473 GRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPG 1509
Score = 37.4 bits (85), Expect = 0.015
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 8/60 (13%)
Query: 87 RPYINITILKGDKGDPGPMGLPG-------YMGREGPQGEPG-PQGSKGDKGEMGSPGAP 138
R + + KG+KGD G G+PG ++ E P+ E S+GD G +GSPG P
Sbjct: 964 RAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSPGLP 1023
Score = 37.0 bits (84), Expect = 0.019
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 95 LKGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
++G G PG G PG G +GP G G G G G G PG
Sbjct: 1190 IRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPG 1231
Score = 36.6 bits (83), Expect = 0.025
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 17/63 (26%)
Query: 96 KGDKGDPGPMGLPGYMGR-----------------EGPQGEPGPQGSKGDKGEMGSPGAP 138
KG++G PGP G G G EGP+GE G G+ G G GS G
Sbjct: 339 KGERGLPGPPGSKGEKGARGNDCVRISPDAPLQCAEGPKGEKGESGALGPSGLPGSTGEK 398
Query: 139 CQK 141
QK
Sbjct: 399 GQK 401
Score = 35.8 bits (81), Expect = 0.042
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
Query: 109 GYMGREGPQGEPGPQGSKGDKGEMG------SPGAPCQ 140
G G +G +G PGP GSKG+KG G SP AP Q
Sbjct: 334 GPKGGKGERGLPGPPGSKGEKGARGNDCVRISPDAPLQ 371
Score = 35.0 bits (79), Expect = 0.072
Identities = 17/40 (42%), Positives = 17/40 (42%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
G G PGP G G GP G PG G G G G G
Sbjct: 1174 GSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAG 1213
Score = 34.3 bits (77), Expect = 0.12
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 94 ILKGDKGDPGP-MGLPGYMGREGPQGEPGPQGSKGDKGEMGSPG 136
I G G PG MG G +GP G PGP G G G G PG
Sbjct: 885 IFSGMPGAPGLWMGSSWQPGPQGPPGIPGPPGPPGVPGLQGVPG 928
Score = 34.3 bits (77), Expect = 0.12
Identities = 17/39 (43%), Positives = 20/39 (51%)
Query: 96 KGDKGDPGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGS 134
+G G PGP G PG G +G G G G G E+GS
Sbjct: 906 QGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGS 944
Score = 33.5 bits (75), Expect = 0.21
Identities = 22/76 (28%), Positives = 25/76 (32%), Gaps = 34/76 (44%)
Query: 97 GDKGDPGPMGLPGYMGREGPQGEPGPQG-------------------------------- 124
G G PGP G+PG G G G PG G
Sbjct: 910 GIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCVQGQRAHPGY 969
Query: 125 --SKGDKGEMGSPGAP 138
KG+KG+ G PG P
Sbjct: 970 LVEKGEKGDQGIPGVP 985
Score = 32.0 bits (71), Expect = 0.61
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 104 PMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAPCQ 140
PM + GR GP PG G+ G G GSPG P Q
Sbjct: 1465 PMEMAAAPGRPGP---PGKDGAPGRPGAPGSPGLPGQ 1498
Score = 31.2 bits (69), Expect = 1.0
Identities = 16/37 (43%), Positives = 16/37 (43%)
Query: 102 PGPMGLPGYMGREGPQGEPGPQGSKGDKGEMGSPGAP 138
PG G PG G G G PG G G G G G P
Sbjct: 1472 PGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLP 1508
Score = 28.5 bits (62), Expect = 6.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 122 PQGSKGDKGEMGSPGAPCQK 141
P G KG KGE G PG P K
Sbjct: 332 PSGPKGGKGERGLPGPPGSK 351
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,275,896
Number of Sequences: 37866
Number of extensions: 657067
Number of successful extensions: 22041
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 2502
Number of HSP's gapped (non-prelim): 10204
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.