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Search of human proteins with 32698984
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32698984 outer dense fiber of sperm tails 3-like 2 [Homo
sapiens]
(289 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32698984 outer dense fiber of sperm tails 3-like 2 [Homo sapi... 610 e-175
gi|28557703 outer dense fiber of sperm tails 3-like 1 [Homo sapi... 157 1e-38
gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens] 145 3e-35
gi|116292180 outer dense fiber of sperm tails 3B [Homo sapiens] 125 3e-29
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 55 7e-08
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 49 4e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 49 4e-06
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 45 7e-05
gi|55750053 atrophin-1 [Homo sapiens] 45 7e-05
gi|55750041 atrophin-1 [Homo sapiens] 45 7e-05
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 44 2e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 44 2e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 44 2e-04
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 44 2e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 43 3e-04
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 43 4e-04
gi|189181750 human immunodeficiency virus type I enhancer bindin... 43 4e-04
gi|116089331 human immunodeficiency virus type I enhancer bindin... 43 4e-04
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 42 6e-04
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 42 6e-04
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 42 6e-04
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 42 6e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 41 0.001
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 41 0.001
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 41 0.001
gi|153792074 proline rich 12 [Homo sapiens] 41 0.001
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 41 0.001
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 41 0.001
gi|150170670 piccolo isoform 2 [Homo sapiens] 41 0.001
gi|150378539 piccolo isoform 1 [Homo sapiens] 41 0.001
>gi|32698984 outer dense fiber of sperm tails 3-like 2 [Homo
sapiens]
Length = 289
Score = 610 bits (1572), Expect = e-175
Identities = 289/289 (100%), Positives = 289/289 (100%)
Query: 1 MGTLSCDSTPRLATAPLGRRVTEGQIPETGLRKSCGTATLENGSGPGLYVLPSTVGFINH 60
MGTLSCDSTPRLATAPLGRRVTEGQIPETGLRKSCGTATLENGSGPGLYVLPSTVGFINH
Sbjct: 1 MGTLSCDSTPRLATAPLGRRVTEGQIPETGLRKSCGTATLENGSGPGLYVLPSTVGFINH 60
Query: 61 DCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEV 120
DCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEV
Sbjct: 61 DCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEV 120
Query: 121 TPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSS 180
TPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSS
Sbjct: 121 TPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSS 180
Query: 181 PSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGP 240
PSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGP
Sbjct: 181 PSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGP 240
Query: 241 GAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPSRPAGHRLPGRCC 289
GAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPSRPAGHRLPGRCC
Sbjct: 241 GAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPSRPAGHRLPGRCC 289
>gi|28557703 outer dense fiber of sperm tails 3-like 1 [Homo
sapiens]
Length = 274
Score = 157 bits (397), Expect = 1e-38
Identities = 90/224 (40%), Positives = 120/224 (53%), Gaps = 2/224 (0%)
Query: 43 GSGPGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQ-DTSPGPIYFLDPKVTRFGR 101
G GP Y+ PS G+I+HD + +PAY+L R SE +SPGP Y LDPK+TRFG
Sbjct: 40 GPGPAKYLRPSCTGYIDHDISMFKAPAYTLHSRHSEKRMVCHSSPGPCYLLDPKITRFGM 99
Query: 102 SCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAP 161
S P M+ R + T Y EK+ P R P +T G R P + +D + PAP
Sbjct: 100 SSCPQVPMEERISNLRLNPTLASCQYYFEKIHPPGERRAPQYTFGYRRPYRVMDLN-PAP 158
Query: 162 NAYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPA 221
N Y MP L G ++P Y++ R +D A PGP Y P+ + Y+ R P
Sbjct: 159 NQYQMPLLLGPNTPVSRAAPCYSLASRDKNWFYKEDVAGGPGPTTYARPEPSIYQNRSPT 218
Query: 222 FTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMGIRHS 265
++M R P L PGPG+H +QVTV+K PAF+MGI+HS
Sbjct: 219 YSMAKRFAYPLDLTPRPGPGSHEVQQVTVHKPHIPAFTMGIKHS 262
>gi|19526475 outer dense fiber of sperm tails 3 [Homo sapiens]
Length = 254
Score = 145 bits (367), Expect = 3e-35
Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 4/223 (1%)
Query: 44 SGPG-LYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRS 102
S PG Y++P T GF+ H T++ +PAYS P ++ SPGP Y ++PK+ R G+
Sbjct: 24 SSPGPKYLIPPTTGFMKHTPTKLRAPAYSFRGAPMLLA-ENCSPGPRYNVNPKILRTGKD 82
Query: 103 CTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPN 162
PAYS+ GR +++ +TPGPG Y PEK + P+ ++ R +D S P P
Sbjct: 83 LGPAYSILGRYQTK-TMLTPGPGDYFPEKSTKYVFDSAPSHSISARTKAFRVD-STPGPA 140
Query: 163 AYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAF 222
AY +P + G K S PS+++ GR+ D + PGP Y D + + P +
Sbjct: 141 AYMLPMVMGPNTVGKASQPSFSIKGRSKLGGFSDDLHKTPGPAAYRQTDVRVTKFKAPQY 200
Query: 223 TMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMGIRHS 265
TM R P PGPGAH PE+VT+ K AP + GI+HS
Sbjct: 201 TMAARVEPPGDKTLKPGPGAHSPEKVTLTKPCAPVVTFGIKHS 243
>gi|116292180 outer dense fiber of sperm tails 3B [Homo sapiens]
Length = 253
Score = 125 bits (315), Expect = 3e-29
Identities = 78/225 (34%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 45 GPG-LYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTS--PGPIYFLDPKVTRFGR 101
GPG Y LP G+ HD +R +PA++ R P Q T+ PGP + + ++T G
Sbjct: 25 GPGPKYKLPPNTGYALHDPSRPRAPAFTFGAR---FPTQQTTCGPGPGHLVPARMTVRGT 81
Query: 102 SCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAP 161
PAYS+ GR + P +TPGPG Y PE+ + + P T+ R + +P P
Sbjct: 82 DGAPAYSIYGRPRRSAPFLTPGPGRYFPERAGNATYPSAPRHTIAPRNWGVQAEQQSPGP 141
Query: 162 NAYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPA 221
AYT+P L G ++ K S+P+ ++ GR +D ++ PGP Y Y+ R P
Sbjct: 142 AAYTVPSLLGPRVIGKVSAPTCSIYGRRAAGSFFEDLSKTPGPCAYQVVSPGVYKSRAPQ 201
Query: 222 FTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAP-AFSMGIRHS 265
FT+L R P+ PGP A+ V++ R P +S GIRHS
Sbjct: 202 FTILARTSLPQDNTRKPGPAAY-----NVDQHRKPRGWSFGIRHS 241
Score = 32.3 bits (72), Expect = 0.50
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 33 KSCGTATLENGSGPGLYVLPSTVGFINHDCTRVASPAYSLV-RRPSEAPPQDTS--PGPI 89
++ G + GP Y +PS +G +V++P S+ RR + + +D S PGP
Sbjct: 128 RNWGVQAEQQSPGPAAYTVPSLLG--PRVIGKVSAPTCSIYGRRAAGSFFEDLSKTPGPC 185
Query: 90 YF--LDPKVTRFGRSCTPAYSMQGRAK-SRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLG 146
+ + P V +S P +++ R + PGP AY+ + +HR P ++ G
Sbjct: 186 AYQVVSPGVY---KSRAPQFTILARTSLPQDNTRKPGPAAYNVD-----QHRKPRGWSFG 237
Query: 147 CRLP--LKPLDTSA 158
R L PL T A
Sbjct: 238 IRHSDYLAPLVTDA 251
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 55.1 bits (131), Expect = 7e-08
Identities = 71/252 (28%), Positives = 94/252 (37%), Gaps = 35/252 (13%)
Query: 27 PETGLRKSCGTATLENGS--GPGLYVLPSTVGFINHDCTR--------VASPAYS--LVR 74
P G RKS +A+ + + P PS G + +R ++SPA S R
Sbjct: 201 PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 260
Query: 75 RPSEAPPQDTSPGPI---YFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPEK 131
AP + P P P+VT + PA S P TP P A +
Sbjct: 261 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALG----PLSSSPLATPSPSAALQSQ 316
Query: 132 VPPVRHRTPPAFTLGCR----LPLKPLDTSAPAPNAYTM---PPLWGSQIFTKPSSPSYT 184
PP TP + +L C+ LPL P SAP P+ T+ P SQ T SP+
Sbjct: 317 APPTLPATPHSSSLTCQLATPLPLAPPSPSAP-PSLQTLPSPPATPPSQATTSLGSPTLQ 375
Query: 185 VVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHC 244
P+ PP P P P +P A LP P A PL P
Sbjct: 376 ATHSFLPS-PPLSPLATPPP---QAPPA----LALPPLQAPPSPPASPPLSPLATPSPQA 427
Query: 245 PEQVTVNKARAP 256
P + V+ +AP
Sbjct: 428 PNALAVHLLQAP 439
Score = 35.8 bits (81), Expect = 0.045
Identities = 51/188 (27%), Positives = 59/188 (31%), Gaps = 41/188 (21%)
Query: 69 AYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYS 128
A L++ P PP P F P S TP P P A
Sbjct: 432 AVHLLQAPFSPPPSPPVQAP--FSPPASPPVSPSATP------------PSQAPPSLAAP 477
Query: 129 PEKVPPVRHRTPPAFTLGCRLPLKPLDTSAP----------APNAYTMPPLW------GS 172
P +VPP +PP P P +AP AP A PPL S
Sbjct: 478 PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 537
Query: 173 QIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPR 232
P SPS ++ PPQ P + P P PA L PR P
Sbjct: 538 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP-------PASPTLQAPRRP- 589
Query: 233 PLEETPGP 240
TPGP
Sbjct: 590 ---PTPGP 594
Score = 33.9 bits (76), Expect = 0.17
Identities = 54/216 (25%), Positives = 73/216 (33%), Gaps = 59/216 (27%)
Query: 65 VASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAK-SRGPEVTPG 123
+A+P L + P +APP +P P+ L +P S G+A S +
Sbjct: 505 LAAPPLQLAKPPPQAPPALATP-PLQALP----------SPPASFPGQAPFSPSASLPMS 553
Query: 124 PGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSY 183
P A P + PPV L + P ++P A PP G T S P
Sbjct: 554 PLATPPPQAPPV--------LAAPLLQVPPSPPASPTLQAPRRPPTPGPD--TSVSGPRL 603
Query: 184 TV-VGRTPPARPPQDPAE-IPGPGQ----------------YDS-----------PDANT 214
T+ + PP P + P+ + GP YDS PDA
Sbjct: 604 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 663
Query: 215 Y--------RQRLPAFTMLGRPRAPRPLEETPGPGA 242
R P G P AP P GPG+
Sbjct: 664 AACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGS 699
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 49.3 bits (116), Expect = 4e-06
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 9/195 (4%)
Query: 84 TSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAF 143
++P P+ + P +T + + TPAY + S G +TPG +SP +P
Sbjct: 1505 SAPSPMGGISPAMTPWNQGATPAYG--AWSPSVGSGMTPGAAGFSPSAASDASGFSPGYS 1562
Query: 144 TLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFT-KPSSPSYTVVGRTPPARPPQDPAEIP 202
P P +P P++ +P G+ + P+SP+Y R+P PQ P+ P
Sbjct: 1563 PAWSPTPGSP---GSPGPSSPYIPSPGGAMSPSYSPTSPAYE--PRSPGGYTPQSPSYSP 1617
Query: 203 GPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMGI 262
Y SP + +Y P ++ +P +P ++ P + +
Sbjct: 1618 TSPSY-SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1676
Query: 263 RHSKRASTMAATTPS 277
+S + + + T+PS
Sbjct: 1677 SYSPTSPSYSPTSPS 1691
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 49.3 bits (116), Expect = 4e-06
Identities = 64/229 (27%), Positives = 76/229 (33%), Gaps = 26/229 (11%)
Query: 66 ASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPG 125
ASP+ P A P GP PK + TP P GP
Sbjct: 932 ASPSPKGAPTPPAATPPSPKGGPAT-PSPKWAPTPPAATP------------PSPKGGPA 978
Query: 126 AYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTV 185
SP+ P TPP+ G P P AP P A T P GS T + T
Sbjct: 979 TPSPKGAPTPPAATPPSPKGG---PATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP 1035
Query: 186 VGRTPPARPPQDPAEIPGP-GQYDSPDANTYRQR----LPAFTMLGRPRAPRPLEETPGP 240
TPP+ P PA P P G +P A + P+ P A P GP
Sbjct: 1036 PAATPPS-PKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGP 1094
Query: 241 GAHCPEQVTVNKARAPAFSMG----IRHSKRASTMAATTPSRPAGHRLP 285
P+ + A P G H +T AAT PS G P
Sbjct: 1095 ATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATP 1143
Score = 40.8 bits (94), Expect = 0.001
Identities = 61/222 (27%), Positives = 78/222 (35%), Gaps = 20/222 (9%)
Query: 67 SPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGA 126
SPA + + + PP T P P G TPA ++ + GP GA
Sbjct: 1022 SPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLP--SPKGGPATPSLKGA 1079
Query: 127 YSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTVV 186
+P TPP+ G P P AP P A T PP + T P + T
Sbjct: 1080 PTPPAA------TPPSPKGG---PATPSPKGAPMPPAAT-PPSPKGGLATPPHKGAPTTP 1129
Query: 187 GRTPPARPPQDPAEIPGPGQYDSPDAN--TYRQRLPAFTMLGRPRAPRPLEETPGPGAHC 244
TPP+ P A P G +P A + + L G P P +P G
Sbjct: 1130 AATPPS-PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT 1188
Query: 245 PE---QVTVNKARAPAFSMGIR--HSKRASTMAATTPSRPAG 281
P T A P+ G+ K A T A TP P G
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1230
Score = 40.0 bits (92), Expect = 0.002
Identities = 60/215 (27%), Positives = 76/215 (35%), Gaps = 35/215 (16%)
Query: 80 PPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRT 139
PP +P P P + G + +P + P TP SP PP T
Sbjct: 1281 PPHKGAPNPAVVTPPS-PKGGPATSPP-----KGAPTPPAATPPSPKGSPGTPPPKGAPT 1334
Query: 140 PPAFTLGCRLPLKPLDT---SAPAPNAYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQ 196
PPA T P P T A P++ P S+ P+ P+ T + PA P
Sbjct: 1335 PPAVT-----PPSPKGTPTLPATTPSSKGGPTTPSSK--EGPTPPAATPSHKGGPAMTPP 1387
Query: 197 DPAEIPG-PGQYDSPDANTYRQRLPAFTMLGRPRAP-----RPLEETPGPGAHCPEQVT- 249
P P P P + PA L +AP R TP G P VT
Sbjct: 1388 SPKRGPAIPSPKGDPTS-------PAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTP 1440
Query: 250 VNKARAPAFSM-----GIRHSKRASTMAATTPSRP 279
V+ +APA S SK T+ A TP P
Sbjct: 1441 VSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSP 1475
Score = 39.7 bits (91), Expect = 0.003
Identities = 60/224 (26%), Positives = 75/224 (33%), Gaps = 49/224 (21%)
Query: 76 PSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRA--KSRGPEVTP---------GP 124
P+ PP + G + PK + TP G A +G TP G
Sbjct: 1175 PAATPP--SPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGL 1232
Query: 125 GAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYT 184
SP+ P TPP+ G P P AP P A T P L G
Sbjct: 1233 ATPSPKGAPTTPAATPPSPKGG---PATPPPKGAPTPPAATPPSLKGGLA---------- 1279
Query: 185 VVGRTPPARPPQDPAEIPGPGQYDSPDANTYR--QRLPAFTMLGRPRAPRPLEETPGP-G 241
TPP + +PA + P P + + PA T P +P+ TP P G
Sbjct: 1280 ----TPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAAT----PPSPKGSPGTPPPKG 1331
Query: 242 AHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPSRPAGHRLP 285
A P VT K T+ ATTPS G P
Sbjct: 1332 APTPPAVTPPS------------PKGTPTLPATTPSSKGGPTTP 1363
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 45.1 bits (105), Expect = 7e-05
Identities = 50/173 (28%), Positives = 58/173 (33%), Gaps = 38/173 (21%)
Query: 100 GRSCTPAYSMQGRAKSRGPEVTPG----PGAYSPEKVPPV--RHRTPPAFTLGCRLPLKP 153
G S A+ GR + R P PG PG P PP +TPP LG P P
Sbjct: 190 GGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLG---PPGP 246
Query: 154 LDTSAPAPNAYTMPP----------------LWGSQIFTKPSSPSYTVVGRTPPARPPQD 197
P P +PP L+ Q F +P +G PP PP
Sbjct: 247 PGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPP------LGPLPPGPPPPV 300
Query: 198 PAEIPGPG-----QYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCP 245
P P PG Q P + R P LG P P PGP P
Sbjct: 301 PGYGPPPGPPPPQQGPPPPPGPFPPRPPG--PLGPPLTLAPPPHLPGPPPGAP 351
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 45.1 bits (105), Expect = 7e-05
Identities = 39/140 (27%), Positives = 52/140 (37%), Gaps = 7/140 (5%)
Query: 63 TRVASPA-YSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVT 121
T +SPA Y P P +P P + + P++ RG
Sbjct: 620 TVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPP 679
Query: 122 PGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSP 181
GPG + P PPA G LP P +APA PPL +QI +P+
Sbjct: 680 AGPGTFKPGSPTVGPGPLPPAGPSG--LPSLPPPPAAPASG----PPLSATQIKQEPAEE 733
Query: 182 SYTVVGRTPPARPPQDPAEI 201
T PPAR P P ++
Sbjct: 734 YETPESPVPPARSPSPPPKV 753
Score = 40.4 bits (93), Expect = 0.002
Identities = 52/213 (24%), Positives = 67/213 (31%), Gaps = 28/213 (13%)
Query: 46 PGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTP 105
PG + P G +H A+ PS + PGP + P
Sbjct: 512 PGAFPHPLEGGSSHH--------AHPYAMSPSLGSLRPYPPGPAHLPPPH-------SQV 556
Query: 106 AYSMQGRAKSRGPEVTPGPGAYSPEKVP--PVRHRTPPAFTLGCRLPLKPLDTSAPAPNA 163
+YS G GP V+ + S P H +P G P P+ P
Sbjct: 557 SYSQAG---PNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPV------PTV 607
Query: 164 YTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFT 223
T + I T SSP+ +PP PP P PG Y + Y+ P
Sbjct: 608 TTSSATLSTVIATVASSPAGYKTA-SPPGPPPYGK-RAPSPGAYKTATPPGYKPGSPPSF 665
Query: 224 MLGRPRAPRPLEETPGPGAHCPEQVTVNKARAP 256
G P R GPG P TV P
Sbjct: 666 RTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLP 698
Score = 28.5 bits (62), Expect = 7.2
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 30/126 (23%)
Query: 71 SLVRRPSEAPPQDTS-PGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSP 129
+L P PP +S P P P + S + + + + S +P P +
Sbjct: 351 TLAPSPHSLPPASSSAPAP-----PMRFPYSSSSSSSAAASSSSSSSSSSASPFPAS--- 402
Query: 130 EKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTVVGRT 189
+ +P H PP +L + PP +T+PS PS V +
Sbjct: 403 QALPSYPHSFPPPTSL----------------SVSNQPPK-----YTQPSLPSQAVWSQG 441
Query: 190 PPARPP 195
PP PP
Sbjct: 442 PPPPPP 447
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 45.1 bits (105), Expect = 7e-05
Identities = 39/140 (27%), Positives = 52/140 (37%), Gaps = 7/140 (5%)
Query: 63 TRVASPA-YSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVT 121
T +SPA Y P P +P P + + P++ RG
Sbjct: 620 TVASSPAGYKTASPPGPPPYGKRAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPP 679
Query: 122 PGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSP 181
GPG + P PPA G LP P +APA PPL +QI +P+
Sbjct: 680 AGPGTFKPGSPTVGPGPLPPAGPSG--LPSLPPPPAAPASG----PPLSATQIKQEPAEE 733
Query: 182 SYTVVGRTPPARPPQDPAEI 201
T PPAR P P ++
Sbjct: 734 YETPESPVPPARSPSPPPKV 753
Score = 40.4 bits (93), Expect = 0.002
Identities = 52/213 (24%), Positives = 67/213 (31%), Gaps = 28/213 (13%)
Query: 46 PGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTP 105
PG + P G +H A+ PS + PGP + P
Sbjct: 512 PGAFPHPLEGGSSHH--------AHPYAMSPSLGSLRPYPPGPAHLPPPH-------SQV 556
Query: 106 AYSMQGRAKSRGPEVTPGPGAYSPEKVP--PVRHRTPPAFTLGCRLPLKPLDTSAPAPNA 163
+YS G GP V+ + S P H +P G P P+ P
Sbjct: 557 SYSQAG---PNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPYPFPPV------PTV 607
Query: 164 YTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFT 223
T + I T SSP+ +PP PP P PG Y + Y+ P
Sbjct: 608 TTSSATLSTVIATVASSPAGYKTA-SPPGPPPYGK-RAPSPGAYKTATPPGYKPGSPPSF 665
Query: 224 MLGRPRAPRPLEETPGPGAHCPEQVTVNKARAP 256
G P R GPG P TV P
Sbjct: 666 RTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLP 698
Score = 28.5 bits (62), Expect = 7.2
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 30/126 (23%)
Query: 71 SLVRRPSEAPPQDTS-PGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSP 129
+L P PP +S P P P + S + + + + S +P P +
Sbjct: 351 TLAPSPHSLPPASSSAPAP-----PMRFPYSSSSSSSAAASSSSSSSSSSASPFPAS--- 402
Query: 130 EKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTVVGRT 189
+ +P H PP +L + PP +T+PS PS V +
Sbjct: 403 QALPSYPHSFPPPTSL----------------SVSNQPPK-----YTQPSLPSQAVWSQG 441
Query: 190 PPARPP 195
PP PP
Sbjct: 442 PPPPPP 447
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/202 (24%), Positives = 68/202 (33%), Gaps = 28/202 (13%)
Query: 46 PGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTP 105
P + LP I+ S + + + + PQDT+ P P T TP
Sbjct: 127 PNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPP---TPSAT------TP 177
Query: 106 AYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYT 165
A + S PE T P S P PP T P + PAP + +
Sbjct: 178 APP----SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTP----PATTPAPPSSS 229
Query: 166 MPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIP-------GPGQYDSPDANTYRQR 218
PP + P +PS T + PP+ A P P +P T
Sbjct: 230 APP----ETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 219 LPAFTMLGRPRAPRPLEETPGP 240
P+ T P +P P E T P
Sbjct: 286 TPSATTPAPPSSPAPQETTAAP 307
Score = 39.7 bits (91), Expect = 0.003
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 17/140 (12%)
Query: 153 PLDTSA--PAPNAYT-MPPLWGSQIFTKPSSPSYTVVGRTPP---------ARPPQDPAE 200
P DT+A P P+A T PP + T + P+ + + PP A PP PA
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPAT 221
Query: 201 IPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSM 260
P P +P T P+ T + P E T P + + A AP
Sbjct: 222 TPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPP--- 278
Query: 261 GIRHSKRASTMAATTPSRPA 280
+ T +ATTP+ P+
Sbjct: 279 --ETTAAPPTPSATTPAPPS 296
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/202 (24%), Positives = 68/202 (33%), Gaps = 28/202 (13%)
Query: 46 PGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTP 105
P + LP I+ S + + + + PQDT+ P P T TP
Sbjct: 127 PNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPP---TPSAT------TP 177
Query: 106 AYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYT 165
A + S PE T P S P PP T P + PAP + +
Sbjct: 178 APP----SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTP----PATTPAPPSSS 229
Query: 166 MPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIP-------GPGQYDSPDANTYRQR 218
PP + P +PS T + PP+ A P P +P T
Sbjct: 230 APP----ETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 219 LPAFTMLGRPRAPRPLEETPGP 240
P+ T P +P P E T P
Sbjct: 286 TPSATTPAPPSSPAPQETTAAP 307
Score = 39.7 bits (91), Expect = 0.003
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 17/140 (12%)
Query: 153 PLDTSA--PAPNAYT-MPPLWGSQIFTKPSSPSYTVVGRTPP---------ARPPQDPAE 200
P DT+A P P+A T PP + T + P+ + + PP A PP PA
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPAT 221
Query: 201 IPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSM 260
P P +P T P+ T + P E T P + + A AP
Sbjct: 222 TPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPP--- 278
Query: 261 GIRHSKRASTMAATTPSRPA 280
+ T +ATTP+ P+
Sbjct: 279 --ETTAAPPTPSATTPAPPS 296
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 43.5 bits (101), Expect = 2e-04
Identities = 50/202 (24%), Positives = 68/202 (33%), Gaps = 28/202 (13%)
Query: 46 PGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTP 105
P + LP I+ S + + + + PQDT+ P P T TP
Sbjct: 127 PNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPP---TPSAT------TP 177
Query: 106 AYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYT 165
A + S PE T P S P PP T P + PAP + +
Sbjct: 178 APP----SSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTP----PATTPAPPSSS 229
Query: 166 MPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIP-------GPGQYDSPDANTYRQR 218
PP + P +PS T + PP+ A P P +P T
Sbjct: 230 APP----ETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP 285
Query: 219 LPAFTMLGRPRAPRPLEETPGP 240
P+ T P +P P E T P
Sbjct: 286 TPSATTPAPPSSPAPQETTAAP 307
Score = 39.7 bits (91), Expect = 0.003
Identities = 38/140 (27%), Positives = 54/140 (38%), Gaps = 17/140 (12%)
Query: 153 PLDTSA--PAPNAYT-MPPLWGSQIFTKPSSPSYTVVGRTPP---------ARPPQDPAE 200
P DT+A P P+A T PP + T + P+ + + PP A PP PA
Sbjct: 162 PQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPAT 221
Query: 201 IPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSM 260
P P +P T P+ T + P E T P + + A AP
Sbjct: 222 TPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPP--- 278
Query: 261 GIRHSKRASTMAATTPSRPA 280
+ T +ATTP+ P+
Sbjct: 279 --ETTAAPPTPSATTPAPPS 296
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 43.5 bits (101), Expect = 2e-04
Identities = 38/134 (28%), Positives = 49/134 (36%), Gaps = 21/134 (15%)
Query: 76 PSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPV 135
P + PP P P+ + + P ++GP PG G+ PP
Sbjct: 79 PQQPPPHQPPP------HPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGS-----APPA 127
Query: 136 RHRTPPAF--TLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTVVGRTPPAR 193
PPA T G P T P P + PP P +P + V TPP
Sbjct: 128 SSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPP------GAPPPTPPSSGVPTTPPQA 181
Query: 194 --PPQDPAEIPGPG 205
PP PA +PGPG
Sbjct: 182 GGPPPPPAAVPGPG 195
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 43.1 bits (100), Expect = 3e-04
Identities = 60/199 (30%), Positives = 73/199 (36%), Gaps = 46/199 (23%)
Query: 65 VASPAYSLVRRPSE---APPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVT 121
+A P S V PS APP + PGP + G + PA P
Sbjct: 286 LAGPKRSSVVSPSHPPPAPPLGSPPGP---------KPGFAPPPAPPPPPPPMIGIPPPP 336
Query: 122 PGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSP 181
P G SP PP +PP+F P P D +AP P PP + T P P
Sbjct: 337 PPVGFGSPGTPPPP---SPPSF------PPHP-DFAAPPPP----PPPPAADYPTLPPPP 382
Query: 182 SYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTML-GRPRAPRPLEETPGP 240
G PP PP P PGP P FT G+P P PL +T P
Sbjct: 383 LSQPTGGAPPPPPPPPP---PGPPP-------------PPFTGADGQPAIPPPLSDTTKP 426
Query: 241 GAHCPEQVTVNKARAPAFS 259
+ P V+ AR+ S
Sbjct: 427 KSSLP---AVSDARSDLLS 442
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 42.7 bits (99), Expect = 4e-04
Identities = 73/310 (23%), Positives = 99/310 (31%), Gaps = 53/310 (17%)
Query: 16 PLGRRVTEGQIPETGLRKSCGTATLENGSGPGLYVLPSTVGFIN----HDCTRVASPAYS 71
P G+R G G + L N + G + P++ N H R A P
Sbjct: 111 PAGQRDVAGGKTGQGPGSRAPSPRLPNKTISGPLIPPASPRLGNTSEAHGAARTAPP--- 167
Query: 72 LVRRPS-EAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPE 130
RP+ APP T P P L P + TP S G V P +P
Sbjct: 168 ---RPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVPCAPP 224
Query: 131 KVPPVRHRTPPAFTLGCRL-------PLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSY 183
PP TPP L L PL P +PP + +P+SP+
Sbjct: 225 PPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPPIPPPLPLLPPCGYPGLKAEPASPAQ 284
Query: 184 TVVGRTPPARPPQDP----------------------AEIPGPGQYDSPDANTYRQRLPA 221
+ PPA PP P +E P P SP Q+ A
Sbjct: 285 D--AQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGA 342
Query: 222 FTMLGRPRAP-------RPLEETPGPGAHCPEQVTVNKARAPAFSMGIRHSKRASTMAAT 274
+ P P + PG G AR+P + S ++ A
Sbjct: 343 QALPAPPAPPGSQPFLQKKRHGRPGAGGGKLNPPPAPPARSPTTEL----SSKSQQATAW 398
Query: 275 TPSRPAGHRL 284
TP++ G +L
Sbjct: 399 TPTQQPGGQL 408
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 42.7 bits (99), Expect = 4e-04
Identities = 65/248 (26%), Positives = 89/248 (35%), Gaps = 40/248 (16%)
Query: 4 LSCDSTPRLATAP-----LGRRVTEGQIPETGLRKSCGTATLENGSGPGL-YVLPSTVGF 57
L DS+P L P G T G R + + ++ + S PGL ++ P+ +G
Sbjct: 1890 LRADSSPILGPQPPDAPASGTEATRGSSVSEAERLTASSCSMSSQSMPGLPWLGPAPLGS 1949
Query: 58 INHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRS---CTPAYSMQGRAK 114
+ D S RRP +P ++ P +T+ S C+PA Q A
Sbjct: 1950 VEKDTGSALSYKPVSPRRPW-SPSKEAGSRPPLARKHSLTKNDSSPQRCSPAREPQASAP 2008
Query: 115 SR-GPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQ 173
S G V PG G + P +P L L PL AP A+ + L G+
Sbjct: 2009 SPPGLHVDPGRGMGALPCGSPRLQLSP--------LTLCPLGREL-APRAHVLSKLEGT- 2058
Query: 174 IFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRP 233
T P P P PGQ +SP R P L P +P
Sbjct: 2059 ---------------TDPGLPRYSPTRRWSPGQAESPP----RSAPPGKWALAGPGSPSA 2099
Query: 234 LEETPGPG 241
E PG G
Sbjct: 2100 GEHGPGLG 2107
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 42.7 bits (99), Expect = 4e-04
Identities = 65/248 (26%), Positives = 89/248 (35%), Gaps = 40/248 (16%)
Query: 4 LSCDSTPRLATAP-----LGRRVTEGQIPETGLRKSCGTATLENGSGPGL-YVLPSTVGF 57
L DS+P L P G T G R + + ++ + S PGL ++ P+ +G
Sbjct: 1890 LRADSSPILGPQPPDAPASGTEATRGSSVSEAERLTASSCSMSSQSMPGLPWLGPAPLGS 1949
Query: 58 INHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRS---CTPAYSMQGRAK 114
+ D S RRP +P ++ P +T+ S C+PA Q A
Sbjct: 1950 VEKDTGSALSYKPVSPRRPW-SPSKEAGSRPPLARKHSLTKNDSSPQRCSPAREPQASAP 2008
Query: 115 SR-GPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQ 173
S G V PG G + P +P L L PL AP A+ + L G+
Sbjct: 2009 SPPGLHVDPGRGMGALPCGSPRLQLSP--------LTLCPLGREL-APRAHVLSKLEGT- 2058
Query: 174 IFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRP 233
T P P P PGQ +SP R P L P +P
Sbjct: 2059 ---------------TDPGLPRYSPTRRWSPGQAESPP----RSAPPGKWALAGPGSPSA 2099
Query: 234 LEETPGPG 241
E PG G
Sbjct: 2100 GEHGPGLG 2107
Score = 28.9 bits (63), Expect = 5.5
Identities = 62/240 (25%), Positives = 81/240 (33%), Gaps = 79/240 (32%)
Query: 1 MGTLSCDSTPRLATAPLGRRVTEGQIPETGLRKSCGTATLENGSGPGLYVLPSTVGFINH 60
MG L C S PRL +PL T + ++ + LE + PGL
Sbjct: 2021 MGALPCGS-PRLQLSPL----TLCPLGRELAPRAHVLSKLEGTTDPGL------------ 2063
Query: 61 DCTRVASPAYSLVRRPS----EAPPQDTSPG----------------PIYFLDPKVT--- 97
P YS RR S E+PP+ PG P LDP+V
Sbjct: 2064 -------PRYSPTRRWSPGQAESPPRSAPPGKWALAGPGSPSAGEHGPGLGLDPRVLFPP 2116
Query: 98 ------RFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPL 151
RS S +A+SR P +PG PA L R P
Sbjct: 2117 APLPHKLLSRSPETCASPWQKAESRSPSCSPG-----------------PAHPLSSR-PF 2158
Query: 152 KPLD------TSAPAPNAYTMPPLWGSQIFTKPSSPSYTVVG-RTPPARPPQDPAEIPGP 204
L + N ++ PL SQ T+ P + G + ARP P +PGP
Sbjct: 2159 SALHDFHGHILARTEENIFSHLPL-HSQHLTRAPCPLIPIGGIQMVQARPGAHPTLLPGP 2217
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 6e-04
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 20/161 (12%)
Query: 63 TRVASPAY-SLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVT 121
TR+A PA +L P+ AP +P P+ P + P G P+
Sbjct: 573 TRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPA 632
Query: 122 ---PGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKP 178
PGP + P+ PP TS A + PP P
Sbjct: 633 CPPPGPAPHPTGPPGPIPVPAPPQIATS---------TSLLAAQSLVPPP-------GLP 676
Query: 179 SSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRL 219
S + V+ PP PP D P +SPD N Q+L
Sbjct: 677 GSSTPGVLPYFPPGLPPPDAGGAPQSSMSESPDVNLVTQQL 717
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 6e-04
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 20/161 (12%)
Query: 63 TRVASPAY-SLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVT 121
TR+A PA +L P+ AP +P P+ P + P G P+
Sbjct: 573 TRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPA 632
Query: 122 ---PGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKP 178
PGP + P+ PP TS A + PP P
Sbjct: 633 CPPPGPAPHPTGPPGPIPVPAPPQIATS---------TSLLAAQSLVPPP-------GLP 676
Query: 179 SSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRL 219
S + V+ PP PP D P +SPD N Q+L
Sbjct: 677 GSSTPGVLPYFPPGLPPPDAGGAPQSSMSESPDVNLVTQQL 717
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 42.0 bits (97), Expect = 6e-04
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 20/161 (12%)
Query: 63 TRVASPAY-SLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVT 121
TR+A PA +L P+ AP +P P+ P + P G P+
Sbjct: 573 TRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPA 632
Query: 122 ---PGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKP 178
PGP + P+ PP TS A + PP P
Sbjct: 633 CPPPGPAPHPTGPPGPIPVPAPPQIATS---------TSLLAAQSLVPPP-------GLP 676
Query: 179 SSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRL 219
S + V+ PP PP D P +SPD N Q+L
Sbjct: 677 GSSTPGVLPYFPPGLPPPDAGGAPQSSMSESPDVNLVTQQL 717
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 42.0 bits (97), Expect = 6e-04
Identities = 41/161 (25%), Positives = 55/161 (34%), Gaps = 20/161 (12%)
Query: 63 TRVASPAY-SLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVT 121
TR+A PA +L P+ AP +P P+ P + P G P+
Sbjct: 434 TRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPA 493
Query: 122 ---PGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKP 178
PGP + P+ PP TS A + PP P
Sbjct: 494 CPPPGPAPHPTGPPGPIPVPAPPQIATS---------TSLLAAQSLVPPP-------GLP 537
Query: 179 SSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRL 219
S + V+ PP PP D P +SPD N Q+L
Sbjct: 538 GSSTPGVLPYFPPGLPPPDAGGAPQSSMSESPDVNLVTQQL 578
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 41.2 bits (95), Expect = 0.001
Identities = 70/276 (25%), Positives = 87/276 (31%), Gaps = 48/276 (17%)
Query: 44 SGPGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSC 103
SGPG + +PS H R P R P P + P I P R
Sbjct: 145 SGPGRFPVPSP----GH---RSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPR----- 192
Query: 104 TPAYSMQGRAKSRG-PEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPN 162
+Q +RG P V GP SP PP G + PL +S+P N
Sbjct: 193 ----PIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSN 248
Query: 163 AYTMPPLWGSQIFTKPSSPSYTVVGR-------TPP---------------------ARP 194
+PP + KP P V R PP A P
Sbjct: 249 RPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPP 308
Query: 195 PQDPAEIPGPGQY-DSPDANTYRQRLPAFTM-LGRPRAPRPLEETPGPGAHCPEQVTVNK 252
P P PGP S N RLP + L P P GP P +
Sbjct: 309 PPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPP 368
Query: 253 ARAPAFSMG-IRHSKRASTMAATTPSRPAGHRLPGR 287
R P G + S +T+ + PA +LP R
Sbjct: 369 VRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSR 404
Score = 30.8 bits (68), Expect = 1.4
Identities = 48/204 (23%), Positives = 63/204 (30%), Gaps = 33/204 (16%)
Query: 68 PAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAY 127
P+ S P PP P P L P + G TP + + S P PG
Sbjct: 300 PSASSQAPPPPPPPSRPGPPP---LPPSSS--GNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Query: 128 SPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAP-------NAYTMPPLWGSQIFTKPSS 180
P PP PP P S P P N T L + S
Sbjct: 355 GPLPPPPSERPPPPV--------RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSG 406
Query: 181 PSYTVVGRTPPARPPQDPAEIPGP---------GQYDSPDANTYRQRLPAFTMLGRPRAP 231
G PP P + A P P G DSP + + R + P P
Sbjct: 407 VDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLP-PP 465
Query: 232 RPLEETPGPGAHCPEQVTVNKARA 255
P +T P ++ N++R+
Sbjct: 466 EPYVQTT---KSYPSKLARNESRS 486
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 41.2 bits (95), Expect = 0.001
Identities = 70/276 (25%), Positives = 87/276 (31%), Gaps = 48/276 (17%)
Query: 44 SGPGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSC 103
SGPG + +PS H R P R P P + P I P R
Sbjct: 145 SGPGRFPVPSP----GH---RSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTPR----- 192
Query: 104 TPAYSMQGRAKSRG-PEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPN 162
+Q +RG P V GP SP PP G + PL +S+P N
Sbjct: 193 ----PIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSN 248
Query: 163 AYTMPPLWGSQIFTKPSSPSYTVVGR-------TPP---------------------ARP 194
+PP + KP P V R PP A P
Sbjct: 249 RPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPP 308
Query: 195 PQDPAEIPGPGQY-DSPDANTYRQRLPAFTM-LGRPRAPRPLEETPGPGAHCPEQVTVNK 252
P P PGP S N RLP + L P P GP P +
Sbjct: 309 PPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPP 368
Query: 253 ARAPAFSMG-IRHSKRASTMAATTPSRPAGHRLPGR 287
R P G + S +T+ + PA +LP R
Sbjct: 369 VRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSR 404
Score = 30.8 bits (68), Expect = 1.4
Identities = 48/204 (23%), Positives = 63/204 (30%), Gaps = 33/204 (16%)
Query: 68 PAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAY 127
P+ S P PP P P L P + G TP + + S P PG
Sbjct: 300 PSASSQAPPPPPPPSRPGPPP---LPPSSS--GNDETPRLPQRNLSLSSSTPPLPSPGRS 354
Query: 128 SPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAP-------NAYTMPPLWGSQIFTKPSS 180
P PP PP P S P P N T L + S
Sbjct: 355 GPLPPPPSERPPPPV--------RDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSG 406
Query: 181 PSYTVVGRTPPARPPQDPAEIPGP---------GQYDSPDANTYRQRLPAFTMLGRPRAP 231
G PP P + A P P G DSP + + R + P P
Sbjct: 407 VDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNGFQDSPCEDEWESRFYFHPISDLP-PP 465
Query: 232 RPLEETPGPGAHCPEQVTVNKARA 255
P +T P ++ N++R+
Sbjct: 466 EPYVQTT---KSYPSKLARNESRS 486
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 41.2 bits (95), Expect = 0.001
Identities = 57/225 (25%), Positives = 81/225 (36%), Gaps = 41/225 (18%)
Query: 74 RRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPEKVP 133
RR +P + SP P R S +GR + R P P SP P
Sbjct: 519 RRRRHSPSRSASPSP------------RKRQKETSPRGRRR-RSPSPPPTRRRRSPSPAP 565
Query: 134 PVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKP-----SSPSYTVVGR 188
P R R P R P P +P+P Y+ PP+ + P +SP R
Sbjct: 566 PPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYS-PPIQRRYSPSPPPKRRTASPPPPPKRR 624
Query: 189 TPPARPP-QDPAEIPGPGQYDSPDANTYRQRLPAFTMLGR-----------PRAPRP-LE 235
P+ PP + + P P Q SP ++R P+ + R R+P+P
Sbjct: 625 ASPSPPPKRRVSHSPPPKQRSSP---VTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKR 681
Query: 236 ETPGPGAHCPEQVTVNKARAPAFSMGIRHS--KRASTMAATTPSR 278
+P P P+ + P G S +R S +T P R
Sbjct: 682 HSPSPRPRAPQ----TSSSPPPVRRGASSSPQRRQSPSPSTRPIR 722
Score = 38.9 bits (89), Expect = 0.005
Identities = 40/156 (25%), Positives = 58/156 (37%), Gaps = 23/156 (14%)
Query: 105 PAYSMQGRAKSRGPEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAY 164
P + R++S P P SP + P R RTPP R+P P + +P
Sbjct: 298 PRRRHRSRSRSYSPRRRP-----SPRRRPSPRRRTPPR-----RMPPPPRHRRSRSPVRR 347
Query: 165 TMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTM 224
S + SS S + R+PP +PP+ + P + SP A+ R+R
Sbjct: 348 RRR---SSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRR------ 398
Query: 225 LGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSM 260
P P P H P N+ R S+
Sbjct: 399 ----HRPSPPATPPPKTRHSPTPQQSNRTRKSRVSV 430
Score = 31.6 bits (70), Expect = 0.85
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 23/215 (10%)
Query: 74 RRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPE--- 130
RR S +P P+ R R + + S + R KSR P P +PE
Sbjct: 174 RRKSRSPSPRRRSSPV--------RRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPE 225
Query: 131 -----KVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTV 185
K P V+ T + L P + P+P + + T+P S S +
Sbjct: 226 PSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEK--TRPRSRSRSK 283
Query: 186 VGRTPPARPPQDPAEIPGPGQYDSPDANTYR-QRLPAFTMLGRPRAPRPLEETPGPGAHC 244
+R P P + + +Y +R P+ PR P P P H
Sbjct: 284 SRSRTRSRSPSHTR----PRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHR 339
Query: 245 PEQVTVNKARAPAFSMGIRHSKRASTMAATTPSRP 279
+ V + R + S+ S +S+ + + P +P
Sbjct: 340 RSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 374
Score = 28.9 bits (63), Expect = 5.5
Identities = 49/196 (25%), Positives = 71/196 (36%), Gaps = 29/196 (14%)
Query: 64 RVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPG 123
R ASP+ RR S +PP P+ + +P+ S + R S T
Sbjct: 623 RRASPSPPPKRRVSHSPPPKQRSSPV----------TKRRSPSLSSKHRKGSSPSRST-- 670
Query: 124 PGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAP---NAYTMPPLWGSQIFTKPSS 180
A SP+ P RH P P P +S+P P A + P S PS+
Sbjct: 671 REARSPQ--PNKRHSPSPR-------PRAPQTSSSPPPVRRGASSSPQRRQS---PSPST 718
Query: 181 PSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGP 240
V RTP + + A P P ++ P P P P+ ++ P
Sbjct: 719 RPIRRVSRTPEPKKIKKAAS-PSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPV-QSQSP 776
Query: 241 GAHCPEQVTVNKARAP 256
+ V V KA++P
Sbjct: 777 STNWSPAVPVKKAKSP 792
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 41.2 bits (95), Expect = 0.001
Identities = 64/272 (23%), Positives = 96/272 (35%), Gaps = 37/272 (13%)
Query: 43 GSGPGLYVLPSTVGFINHDCTRVASPAYSLVRRPSEAPPQDTS-------PGPIYFLDPK 95
G+G G S + + +R + P ++ R + A P P + L
Sbjct: 15 GAGAGWSYERSAKASLVYGSSRTSHPETDILHRQAYAAPHPLQSYATNHHPAGLSGLFDT 74
Query: 96 VTRFGRSCTPAYSMQG---RAKSRGPEVTPGPGAYS-------PEKVPPVRHRTPPAFTL 145
S P S+ +SRGP+ PGP A S P + P +
Sbjct: 75 GLHHAGSAGPDASVMNLISALESRGPQ--PGPSASSLLSQFRSPSWQTAMHTPGPTELFI 132
Query: 146 GCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEI--PG 203
LP S+ A +AY P +GS+ F PSS S +PPA P ++
Sbjct: 133 SGALPGSSTFPSSSALSAYQHPASFGSRPFPVPSSLSLQDPPFSPPANGLLSPHDVLHLK 192
Query: 204 PGQYDSPDANTYRQRL------------PAFTMLGRPRAPRPLEETPGPGAHCPEQVTVN 251
P Q + ++ +RL PA T RP P P P P H P Q +
Sbjct: 193 PSQAPTVPSSLGFERLAGGGVLGPAGLGPAQTPPYRPGPPDP----PPPPRHLPTQFNLL 248
Query: 252 KARAPAFSMGIRHSKRASTMAATTPSRPAGHR 283
+ + A + + S + + P P R
Sbjct: 249 ASSSAAAAAAEQSSPQLYNFSGAAPGPPPPER 280
Score = 38.9 bits (89), Expect = 0.005
Identities = 52/179 (29%), Positives = 59/179 (32%), Gaps = 38/179 (21%)
Query: 59 NHDCTRVASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGP 118
N D S A S + P A P+DTS T G PA ++ G G
Sbjct: 1391 NRDLQESISSAISALDDPPLAGPKDTS-----------TPDGPPLAPAAAVPGPPPLPGL 1439
Query: 119 EVTPGPGAYSP----EKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQI 174
G P EK PP PPA T P P P P + PPL +
Sbjct: 1440 PSANSNGTPEPPLLEEKPPPT---PPPAPT---PQPQPPPPPPPPQPALPSPPPL----V 1489
Query: 175 FTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRP 233
PSSP PP PP P +P P P A P P AP P
Sbjct: 1490 APTPSSPP-------PPPLPPPPPPAMPSPPPPPPPAA------APLAAPPEEPAAPSP 1535
Score = 31.2 bits (69), Expect = 1.1
Identities = 28/100 (28%), Positives = 31/100 (31%), Gaps = 7/100 (7%)
Query: 153 PLDTSAP-----APNAYTM--PPLWGSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPG 205
P DTS P AP A PPL G +P ++ PP PP P P P
Sbjct: 1413 PKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPP 1472
Query: 206 QYDSPDANTYRQRLPAFTMLGRPRAPRPLEETPGPGAHCP 245
P P P PL P P P
Sbjct: 1473 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSP 1512
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 40.8 bits (94), Expect = 0.001
Identities = 51/215 (23%), Positives = 75/215 (34%), Gaps = 40/215 (18%)
Query: 81 PQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKS------------RGPEVTPGPGAYS 128
P++T+P + +T+ G S +S + A + GP VTP ++
Sbjct: 929 PEETAPA----VAAAITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGP-VTPATTVHA 983
Query: 129 PEKVPPVRHRTPPAFTLGCRLPLKPLDTSA--PAPNAYTMPPLWGSQIFTKPSSPSYTVV 186
PE+ P + P +P +A P P T P + P P+
Sbjct: 984 PEE--------PDTAAVRVSTPEEPASPAAAVPTPEEPTSP----AAAVPTPEEPTSPAA 1031
Query: 187 GRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEETP-GPGAHCP 245
PP P A +P P + SP A P P A P E P P A P
Sbjct: 1032 AVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPT-----SPAAAVPTPEEPTSPAAAVP 1086
Query: 246 EQVTVNKARAPAFSMGIRHSKRASTMAATTPSRPA 280
T + +PA ++ + A TP PA
Sbjct: 1087 ---TPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPA 1118
Score = 32.7 bits (73), Expect = 0.38
Identities = 41/171 (23%), Positives = 56/171 (32%), Gaps = 20/171 (11%)
Query: 118 PEVTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTK 177
PE P A P P +P A P P + P P T P +
Sbjct: 1049 PEEPTSPAAAVPTPEEPT---SPAAAVPTPEEPTSPA-AAVPTPEEPTSP----AAAVPT 1100
Query: 178 PSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRPLEE- 236
P P+ P P A +P P + SP A PAF P P P E
Sbjct: 1101 PEEPTSPAAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFP---APAVPTPEESA 1157
Query: 237 -------TPGPGAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPSRPA 280
TP A P A + +F+ + + ++ AA+ P+ A
Sbjct: 1158 SAAVAVPTPEESA-SPAAAVPTPAESASFAAVVATLEEPTSPAASVPTPAA 1207
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 40.8 bits (94), Expect = 0.001
Identities = 73/270 (27%), Positives = 93/270 (34%), Gaps = 62/270 (22%)
Query: 27 PETGLRKSCGTATLENGS--GPGLYVLPSTVGFINHDCTR--------VASPAYS--LVR 74
P G RKS +A+ + + P PS G + +R ++SPA S R
Sbjct: 192 PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSAR 251
Query: 75 RPSEAPPQDTSPGPI---YFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYSPEK 131
AP + P P P+VT + PA S P TP P A
Sbjct: 252 GTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALG----PLSSSPLATPSPSAPPSPS 307
Query: 132 VPPVRHR------TPPA---FTLGCRL-----------PLKPLDTSAP-APNAYTMPPLW 170
PP TPP+ +LG PL PL T P AP A +PPL
Sbjct: 308 APPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPL- 366
Query: 171 GSQIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRP-- 228
+ PS PPA PP P P P +P+A F+ P
Sbjct: 367 -------QAPPS-------PPASPPLSPLATPSP---QAPNALAVHLLQAPFSPPPSPPV 409
Query: 229 RAP--RPLEETPGPGAHCPEQVTVNKARAP 256
+AP P P A P Q + A P
Sbjct: 410 QAPFSPPASPPVSPSATPPSQAPPSLAAPP 439
Score = 35.8 bits (81), Expect = 0.045
Identities = 51/188 (27%), Positives = 59/188 (31%), Gaps = 41/188 (21%)
Query: 69 AYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEVTPGPGAYS 128
A L++ P PP P F P S TP P P A
Sbjct: 393 AVHLLQAPFSPPPSPPVQAP--FSPPASPPVSPSATP------------PSQAPPSLAAP 438
Query: 129 PEKVPPVRHRTPPAFTLGCRLPLKPLDTSAP----------APNAYTMPPLW------GS 172
P +VPP +PP P P +AP AP A PPL S
Sbjct: 439 PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPAS 498
Query: 173 QIFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPR 232
P SPS ++ PPQ P + P P PA L PR P
Sbjct: 499 FPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSP-------PASPTLQAPRRP- 550
Query: 233 PLEETPGP 240
TPGP
Sbjct: 551 ---PTPGP 555
Score = 33.9 bits (76), Expect = 0.17
Identities = 54/216 (25%), Positives = 73/216 (33%), Gaps = 59/216 (27%)
Query: 65 VASPAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAK-SRGPEVTPG 123
+A+P L + P +APP +P P+ L +P S G+A S +
Sbjct: 466 LAAPPLQLAKPPPQAPPALATP-PLQALP----------SPPASFPGQAPFSPSASLPMS 514
Query: 124 PGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPSSPSY 183
P A P + PPV L + P ++P A PP G T S P
Sbjct: 515 PLATPPPQAPPV--------LAAPLLQVPPSPPASPTLQAPRRPPTPGPD--TSVSGPRL 564
Query: 184 TV-VGRTPPARPPQDPAE-IPGPGQ----------------YDS-----------PDANT 214
T+ + PP P + P+ + GP YDS PDA
Sbjct: 565 TLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAEL 624
Query: 215 Y--------RQRLPAFTMLGRPRAPRPLEETPGPGA 242
R P G P AP P GPG+
Sbjct: 625 AACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGS 660
Score = 29.3 bits (64), Expect = 4.2
Identities = 49/182 (26%), Positives = 67/182 (36%), Gaps = 30/182 (16%)
Query: 125 GAYSPEKVP---PVRHRTPPAFTLGCRLP----LKPLDTSAPAPNAYTMPPLWGSQIFTK 177
GA PE P P R PPA G R P P S+P + T P Q +
Sbjct: 67 GATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLR 126
Query: 178 PSSPSYTVVGRTPPARPPQDPAEI--------PGPGQYDSPDANTYRQRLPAFTMLGRPR 229
S+ G+ A P + P PG +P R+ A T +G PR
Sbjct: 127 ISAEETVARGKATEA-PKRSALSAGARRDTSGPTPG---TPSPAMARRSRAAGTEVGLPR 182
Query: 230 ---APRPLEETPGP-------GAHCPEQVTVNKARAPAFSMGI-RHSKRASTMAATTPSR 278
+ RP T GP H + + R P+ G+ R + R+ + +AT S
Sbjct: 183 PAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSS 242
Query: 279 PA 280
PA
Sbjct: 243 PA 244
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 40.8 bits (94), Expect = 0.001
Identities = 60/248 (24%), Positives = 87/248 (35%), Gaps = 42/248 (16%)
Query: 67 SPAYSLVRRPSEAPP-------QDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPE 119
SP+ +++P+ P + + PGP P G + P G K P
Sbjct: 300 SPSKPPIQQPTPGKPPAQQPGHEKSQPGPA---KPPAQPSGLT-KPLAQQPGTVK---PP 352
Query: 120 VTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPS 179
V P PG P P+ PPA G P + P P A PP G +P
Sbjct: 353 VQP-PGTTKPP-AQPLGPAKPPAQQTGSEKP----SSEQPGPKALAQPPGVGKTPAQQPG 406
Query: 180 S---PSYTVVGRTPPARPP--QDPAEIPGP--------------GQYDSPDANTYRQRLP 220
P+ V P A+ P Q PA+ PGP Q P + +Q P
Sbjct: 407 PAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGP 466
Query: 221 AFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMG-IRHSKRASTMAATTPSRP 279
P +P + PGP P+Q A+ P+ G + + A +P +P
Sbjct: 467 TKPPSQLPGPAKPPPQQPGPAKPPPQQ--PGSAKPPSQQPGSTKPPPQQPGPAKPSPQQP 524
Query: 280 AGHRLPGR 287
+ P +
Sbjct: 525 GSTKPPSQ 532
Score = 37.7 bits (86), Expect = 0.012
Identities = 64/240 (26%), Positives = 82/240 (34%), Gaps = 36/240 (15%)
Query: 68 PAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEV-TPGP-- 124
PA ++ P PGP P G TPA G AK +V TP P
Sbjct: 368 PAKPPAQQTGSEKPSSEQPGPKALAQPP----GVGKTPA-QQPGPAKPPTQQVGTPKPLA 422
Query: 125 ---GAYSPEKVP-----PVRHRTP---PAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQ 173
G SP K P PV+ P PA G P TSA T PP SQ
Sbjct: 423 QQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAG------PGKTSAQQTGP-TKPP---SQ 472
Query: 174 IFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRP 233
+ P+ P G P PPQ P P Q +Q PA +P + +P
Sbjct: 473 L-PGPAKPPPQQPGPAKP--PPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKP 529
Query: 234 LEETPGPGAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPS----RPAGHRLPGRCC 289
+ PG +Q + K A + + + + T S +P LP C
Sbjct: 530 PSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTIC 589
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 40.8 bits (94), Expect = 0.001
Identities = 60/248 (24%), Positives = 87/248 (35%), Gaps = 42/248 (16%)
Query: 67 SPAYSLVRRPSEAPP-------QDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPE 119
SP+ +++P+ P + + PGP P G + P G K P
Sbjct: 300 SPSKPPIQQPTPGKPPAQQPGHEKSQPGPA---KPPAQPSGLT-KPLAQQPGTVK---PP 352
Query: 120 VTPGPGAYSPEKVPPVRHRTPPAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQIFTKPS 179
V P PG P P+ PPA G P + P P A PP G +P
Sbjct: 353 VQP-PGTTKPP-AQPLGPAKPPAQQTGSEKP----SSEQPGPKALAQPPGVGKTPAQQPG 406
Query: 180 S---PSYTVVGRTPPARPP--QDPAEIPGP--------------GQYDSPDANTYRQRLP 220
P+ V P A+ P Q PA+ PGP Q P + +Q P
Sbjct: 407 PAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGP 466
Query: 221 AFTMLGRPRAPRPLEETPGPGAHCPEQVTVNKARAPAFSMG-IRHSKRASTMAATTPSRP 279
P +P + PGP P+Q A+ P+ G + + A +P +P
Sbjct: 467 TKPPSQLPGPAKPPPQQPGPAKPPPQQ--PGSAKPPSQQPGSTKPPPQQPGPAKPSPQQP 524
Query: 280 AGHRLPGR 287
+ P +
Sbjct: 525 GSTKPPSQ 532
Score = 37.7 bits (86), Expect = 0.012
Identities = 64/240 (26%), Positives = 82/240 (34%), Gaps = 36/240 (15%)
Query: 68 PAYSLVRRPSEAPPQDTSPGPIYFLDPKVTRFGRSCTPAYSMQGRAKSRGPEV-TPGP-- 124
PA ++ P PGP P G TPA G AK +V TP P
Sbjct: 368 PAKPPAQQTGSEKPSSEQPGPKALAQPP----GVGKTPA-QQPGPAKPPTQQVGTPKPLA 422
Query: 125 ---GAYSPEKVP-----PVRHRTP---PAFTLGCRLPLKPLDTSAPAPNAYTMPPLWGSQ 173
G SP K P PV+ P PA G P TSA T PP SQ
Sbjct: 423 QQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAG------PGKTSAQQTGP-TKPP---SQ 472
Query: 174 IFTKPSSPSYTVVGRTPPARPPQDPAEIPGPGQYDSPDANTYRQRLPAFTMLGRPRAPRP 233
+ P+ P G P PPQ P P Q +Q PA +P + +P
Sbjct: 473 L-PGPAKPPPQQPGPAKP--PPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKP 529
Query: 234 LEETPGPGAHCPEQVTVNKARAPAFSMGIRHSKRASTMAATTPS----RPAGHRLPGRCC 289
+ PG +Q + K A + + + + T S +P LP C
Sbjct: 530 PSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAKQPPSQGLPKTIC 589
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,710,692
Number of Sequences: 37866
Number of extensions: 1136779
Number of successful extensions: 6319
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 621
Number of HSP's that attempted gapping in prelim test: 5025
Number of HSP's gapped (non-prelim): 1642
length of query: 289
length of database: 18,247,518
effective HSP length: 101
effective length of query: 188
effective length of database: 14,423,052
effective search space: 2711533776
effective search space used: 2711533776
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.