Search of human proteins with 32698777

Search of human proteins with 32698777

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|32698777 hypothetical protein LOC201627 [Homo sapiens]
         (608 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|32698777 hypothetical protein LOC201627 [Homo sapiens]            1245   0.0  
gi|116292178 hypothetical protein LOC414918 [Homo sapiens]            721   0.0  
gi|29788755 SET binding factor 2 [Homo sapiens]                        37   0.040
gi|57529131 AVL9 homolog (S. cerevisiase) [Homo sapiens]               35   0.15 
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]       35   0.15 
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]                    34   0.34 
gi|5454140 tumor susceptibility gene 101 [Homo sapiens]                33   1.00 
gi|224458301 family with sequence similarity 186, member A [Homo...    32   1.7  
gi|78000213 DNA methyltransferase 1 associated protein 1 [Homo s...    32   2.2  
gi|78000211 DNA methyltransferase 1 associated protein 1 [Homo s...    32   2.2  
gi|13123776 DNA methyltransferase 1 associated protein 1 [Homo s...    32   2.2  
gi|68299759 ecotropic viral integration site 5 [Homo sapiens]          32   2.2  
gi|45505178 cancer antigen 1 [Homo sapiens]                            31   3.8  
gi|4504063 golgin 97 [Homo sapiens]                                    31   3.8  
gi|109150419 missing oocyte, meiosis regulator, homolog [Homo sa...    30   8.4  

>gi|32698777 hypothetical protein LOC201627 [Homo sapiens]
          Length = 608

 Score = 1245 bits (3221), Expect = 0.0
 Identities = 608/608 (100%), Positives = 608/608 (100%)

Query: 1   MALRGPAGLGPGSRRPLDEAVAGAEGREAPALVAAGGAPEDDEEDDGRGRGLLRWDSFSA 60
           MALRGPAGLGPGSRRPLDEAVAGAEGREAPALVAAGGAPEDDEEDDGRGRGLLRWDSFSA
Sbjct: 1   MALRGPAGLGPGSRRPLDEAVAGAEGREAPALVAAGGAPEDDEEDDGRGRGLLRWDSFSA 60

Query: 61  WLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFPDSNSGCLGDTQFCFRFRQ 120
           WLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFPDSNSGCLGDTQFCFRFRQ
Sbjct: 61  WLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFPDSNSGCLGDTQFCFRFRQ 120

Query: 121 SSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVRDKTLKRGYFQKSLVLISKLP 180
           SSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVRDKTLKRGYFQKSLVLISKLP
Sbjct: 121 SSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVRDKTLKRGYFQKSLVLISKLP 180

Query: 181 YIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPVPGKTLHLPIMGVVMKVRIPTCH 240
           YIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPVPGKTLHLPIMGVVMKVRIPTCH
Sbjct: 181 YIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPVPGKTLHLPIMGVVMKVRIPTCH 240

Query: 241 DKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFCPVFLHSQMLWELVLLGEPLVVMAP 300
           DKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFCPVFLHSQMLWELVLLGEPLVVMAP
Sbjct: 241 DKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFCPVFLHSQMLWELVLLGEPLVVMAP 300

Query: 301 SPSESSETVLALVNCISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSVILGVTNPFFAK 360
           SPSESSETVLALVNCISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSVILGVTNPFFAK
Sbjct: 301 SPSESSETVLALVNCISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSVILGVTNPFFAK 360

Query: 361 TLQHWPHIIRIGDLKPTGEIPKQVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEEIIKQLQ 420
           TLQHWPHIIRIGDLKPTGEIPKQVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEEIIKQLQ
Sbjct: 361 TLQHWPHIIRIGDLKPTGEIPKQVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEEIIKQLQ 420

Query: 421 KGVQQKRPSEAQSVILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQLRQFLPE 480
           KGVQQKRPSEAQSVILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQLRQFLPE
Sbjct: 421 KGVQQKRPSEAQSVILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQLRQFLPE 480

Query: 481 EFMKTLEKTGPQLTSRIKGDWIGLYRHFLKSPNFDGWFKTRRKEMTQKLEALHLEALCEE 540
           EFMKTLEKTGPQLTSRIKGDWIGLYRHFLKSPNFDGWFKTRRKEMTQKLEALHLEALCEE
Sbjct: 481 EFMKTLEKTGPQLTSRIKGDWIGLYRHFLKSPNFDGWFKTRRKEMTQKLEALHLEALCEE 540

Query: 541 DLLLWIQKHTEVETVDLVLKLKNKLLQADREHLPVKPDTMEKLRTHIDAIILALPEDLQG 600
           DLLLWIQKHTEVETVDLVLKLKNKLLQADREHLPVKPDTMEKLRTHIDAIILALPEDLQG
Sbjct: 541 DLLLWIQKHTEVETVDLVLKLKNKLLQADREHLPVKPDTMEKLRTHIDAIILALPEDLQG 600

Query: 601 ILLKTGMT 608
           ILLKTGMT
Sbjct: 601 ILLKTGMT 608


>gi|116292178 hypothetical protein LOC414918 [Homo sapiens]
          Length = 585

 Score =  721 bits (1862), Expect = 0.0
 Identities = 332/548 (60%), Positives = 440/548 (80%)

Query: 55  WDSFSAWLHCVCVVGFDLELGQAVEVIYPQHSKLTDREKTNICYLSFPDSNSGCLGDTQF 114
           W  FSAWL CVCVV FDLELGQA++++YP   +LTD+EK++ICYLSFPDS+SGCLGDTQF
Sbjct: 35  WARFSAWLECVCVVTFDLELGQALQLVYPNDFRLTDKEKSSICYLSFPDSHSGCLGDTQF 94

Query: 115 CFRFRQSSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVRDKTLKRGYFQKSLV 174
            FR RQ  G+R   H     ++   PV L+++PA+++GYVYFRQV+D ++KRGYFQKSLV
Sbjct: 95  SFRMRQCGGQRSPWHADDRHYNSRAPVALQREPAHYFGYVYFRQVKDSSVKRGYFQKSLV 154

Query: 175 LISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPVPGKTLHLPIMGVVMKV 234
           L+S+LP++  F  +L  IAPEYF+K  P LEA C+++D+WPAP PG+TL+LP+MGVV++V
Sbjct: 155 LVSRLPFVRLFQALLSLIAPEYFDKLAPCLEAVCSEIDQWPAPAPGQTLNLPVMGVVVQV 214

Query: 235 RIPTCHDKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFCPVFLHSQMLWELVLLGEP 294
           RIP+  DK  ++   Q  Q+      V+L +VHE+D+FRCF PV  H Q LWEL+LLGEP
Sbjct: 215 RIPSRVDKSESSPPKQFDQENLLPAPVVLASVHELDLFRCFRPVLTHMQTLWELMLLGEP 274

Query: 295 LVVMAPSPSESSETVLALVNCISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSVILGVT 354
           L+V+APSP  SSE VLAL +C+ PL++  DFRPYFTIHDSEFKE+TTRTQAPP+V+LGVT
Sbjct: 275 LLVLAPSPDVSSEMVLALTSCLQPLRFCCDFRPYFTIHDSEFKEFTTRTQAPPNVVLGVT 334

Query: 355 NPFFAKTLQHWPHIIRIGDLKPTGEIPKQVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEE 414
           NPFF KTLQHWPHI+R+G+ K +G++PKQVK+KK   LKTLD+KPG+YT+Y  +L+RD+ 
Sbjct: 335 NPFFIKTLQHWPHILRVGEPKMSGDLPKQVKLKKPSRLKTLDTKPGLYTAYTAHLHRDKA 394

Query: 415 IIKQLQKGVQQKRPSEAQSVILRRYFLELTQSFIIPLERYVASLMPLQKSISPWKSPPQL 474
           ++K+L KGVQ+KRPS+ QS +LRR+ LELTQSFIIPLE Y+ASLMPLQKSI+PWK+PPQ+
Sbjct: 395 LLKRLLKGVQKKRPSDVQSALLRRHLLELTQSFIIPLEHYMASLMPLQKSITPWKTPPQI 454

Query: 475 RQFLPEEFMKTLEKTGPQLTSRIKGDWIGLYRHFLKSPNFDGWFKTRRKEMTQKLEALHL 534
           + F  ++F+++LE  GPQLT  +KGDW+GLYR F KSP+FDGW++ R KEM  KLEALHL
Sbjct: 455 QPFSQDDFLRSLEHAGPQLTCILKGDWLGLYRRFFKSPHFDGWYRQRHKEMALKLEALHL 514

Query: 535 EALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQADREHLPVKPDTMEKLRTHIDAIILAL 594
           EA+CE ++  W++  +EVE VDLVLKL+ KL++A    LPVK  T+++ + +I+ +I +L
Sbjct: 515 EAICEANIETWMKDKSEVEVVDLVLKLREKLVRAQGHQLPVKEATLQRAQLYIETVIGSL 574

Query: 595 PEDLQGIL 602
           P+DLQ +L
Sbjct: 575 PKDLQAVL 582


>gi|29788755 SET binding factor 2 [Homo sapiens]
          Length = 1849

 Score = 37.4 bits (85), Expect = 0.040
 Identities = 55/221 (24%), Positives = 91/221 (41%), Gaps = 30/221 (13%)

Query: 171 KSLVLISKLPYIHFFHTVLKQIAPEYFEKNEPYLEAACNDVDRWPAPVPGKTLHLPIMGV 230
           KSLVL+S+L Y   F   L  I   Y +     LE+   ++     P  G +  L  +G 
Sbjct: 119 KSLVLVSRLYYPEIFRACLGLIYTVYVDSLNVSLESLIANLCACLVPAAGGSQKLFSLGA 178

Query: 231 VMKVRIPT-CHDKPGTTQIVQLTQQVDTNISVILPTVHEVDIFRCFCPVFLHSQMLWELV 289
             +  I T  HD    T          T+++++   +   ++   FC V   +++L+   
Sbjct: 179 GDRQLIQTPLHDSLPIT---------GTSVALLFQQLGIQNVLSLFCAVLTENKVLFH-- 227

Query: 290 LLGEPLVVMAPSPSESSETVLALVNCISPLKYFSDFRPYFTIHDSEFKEYTTRTQAPPSV 349
                    + S    S+   AL + + PLKY     PY  I  ++  E  +   +P   
Sbjct: 228 ---------SASFQRLSDACRALESLMFPLKY---SYPYIPILPAQLLEVLS---SPTPF 272

Query: 350 ILGVTNPFFAKTLQHWPHIIRIGDLK-PTGEIPKQVKVKKL 389
           I+GV + F  KT  H    + I DL   T +IP+ + +  L
Sbjct: 273 IIGVHSVF--KTDVHELLDVIIADLDGGTIKIPECIHLSSL 311


>gi|57529131 AVL9 homolog (S. cerevisiase) [Homo sapiens]
          Length = 648

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 41/154 (26%), Positives = 57/154 (37%), Gaps = 38/154 (24%)

Query: 62  LHCVCVVGFDLELGQAVEVIYP-------QHSKLTDREKTNICYLSFPDSNSGCLGDTQF 114
           LH V VVGF  + G  VE  YP         S     E   + +L+ PD       DT F
Sbjct: 17  LHIV-VVGFHHKKGCQVEFSYPPLIPGDGHDSHTLPEEWKYLPFLALPDGAHNYQEDTVF 75

Query: 115 CFRFRQSSGRRVSLHCLLDQFDKDLPVYLKKDPAYFYGYVYFRQVRDKTLK-------RG 167
            F     +G   ++                      +G   +RQ+  K LK       R 
Sbjct: 76  -FHLPPRNGNGATV----------------------FGISCYRQIEAKALKVRQADITRE 112

Query: 168 YFQKSLVLISKLPYIHFFHTVLKQIAPEYFEKNE 201
             QKS+ ++SKLP        L+ I   YFE+ +
Sbjct: 113 TVQKSVCVLSKLPLYGLLQAKLQLITHAYFEEKD 146


>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
          Length = 315

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 4   RGPAGLGPGSRRPLDEAVAGAEGREAPALVAAGG--APEDDEEDD 46
           R P G G GSR      + G  GR A      GG  APEDD+EDD
Sbjct: 125 RPPGGSGGGSRLKPGPQLPGRGGRRAAGGPLGGGAAAPEDDDEDD 169


>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
          Length = 1489

 Score = 34.3 bits (77), Expect = 0.34
 Identities = 20/38 (52%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 10   GPGSRR-PLDEAVAGAEGREAPALVAAGGAPEDDEEDD 46
            GPG RR P + A AGA G EA    A G A ED E++D
Sbjct: 1274 GPGPRRPPWEGADAGAAGGEAGGAGAPGPAEEDGEDED 1311


>gi|5454140 tumor susceptibility gene 101 [Homo sapiens]
          Length = 390

 Score = 32.7 bits (73), Expect = 1.00
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 215 PAPVPGKTLHLPIMGVVMKV---RIPTCHDKPGTTQIVQLTQQVDTNISVILPTVHE 268
           P P  G T ++PI   ++       P C  KP ++  ++  + VD N  + LP +HE
Sbjct: 60  PVPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHE 116


>gi|224458301 family with sequence similarity 186, member A [Homo
            sapiens]
          Length = 2351

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 30/163 (18%)

Query: 214  WPAPVPGKTL----------HLPIMGVVMKVRI---PTCHD-----KPGTTQIVQLTQQV 255
            WP+P PGK             L I+  +    +   P+  D      P TT+  Q+++  
Sbjct: 1935 WPSPAPGKPQKSWSPSVAKKRLAIISSLKSKSVLIHPSAPDFKVAQVPFTTKKFQMSEVS 1994

Query: 256  DTNISV-ILPTVHEVDIFRCFCPVFL-HSQMLWELVLLGEP--LVVMAPSPSESSETVLA 311
            DT+    IL     ++ FR F   F  +   +++     E   L +M P+ S SS T L 
Sbjct: 1995 DTSEETQILRDTFAIESFRTFQSHFTKYRTPVYQTPYTDERALLTLMKPTTSPSSLTTLL 2054

Query: 312  LVNCISPLKYFSDFR------PYFTIHDSEFKEYTTRTQAPPS 348
              + ISPL+++   R      P+     S+ K+   +   PPS
Sbjct: 2055 RTSQISPLEWYQKSRFPPIDKPWILSSVSDTKK--PKVMVPPS 2095


>gi|78000213 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 509 LKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQA 568
           LK P FD   + RRKE  ++L     E + EE+ LL      E+  ++   K + K  Q 
Sbjct: 213 LKIPVFDAGHERRRKEQLERLYNRTPEQVAEEEYLL-----QELRKIEARKKEREKRSQD 267

Query: 569 DREHLPVKPDTMEKLRTHIDAIILALPE 596
            ++ +     T E+ RT   A    LP+
Sbjct: 268 LQKLITAADTTAEQRRTERKAPKKKLPQ 295


>gi|78000211 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 509 LKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQA 568
           LK P FD   + RRKE  ++L     E + EE+ LL      E+  ++   K + K  Q 
Sbjct: 213 LKIPVFDAGHERRRKEQLERLYNRTPEQVAEEEYLL-----QELRKIEARKKEREKRSQD 267

Query: 569 DREHLPVKPDTMEKLRTHIDAIILALPE 596
            ++ +     T E+ RT   A    LP+
Sbjct: 268 LQKLITAADTTAEQRRTERKAPKKKLPQ 295


>gi|13123776 DNA methyltransferase 1 associated protein 1 [Homo
           sapiens]
          Length = 467

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)

Query: 509 LKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQA 568
           LK P FD   + RRKE  ++L     E + EE+ LL      E+  ++   K + K  Q 
Sbjct: 213 LKIPVFDAGHERRRKEQLERLYNRTPEQVAEEEYLL-----QELRKIEARKKEREKRSQD 267

Query: 569 DREHLPVKPDTMEKLRTHIDAIILALPE 596
            ++ +     T E+ RT   A    LP+
Sbjct: 268 LQKLITAADTTAEQRRTERKAPKKKLPQ 295


>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
          Length = 810

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)

Query: 377 TGEIPKQVKVKKLKNL-KTLDSKPGVYTSYKPYLNRDEEIIKQLQKGVQQKRPSEAQS 433
           T E+ +QV++K+L+   + L  +      +K   N +E+ + QL+K + Q R SEA+S
Sbjct: 420 TKEMEEQVEIKRLRTENRLLKQRIETLEKHKCSSNYNEDFVLQLEKELVQARLSEAES 477


>gi|45505178 cancer antigen 1 [Homo sapiens]
          Length = 641

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 35/177 (19%), Positives = 72/177 (40%), Gaps = 13/177 (7%)

Query: 406 KPYLNRDEEIIKQLQKGVQQKRPSEAQSVILRRYFLELTQSFIIPLERYVASLMPLQKSI 465
           K  L   EE++   QK +Q+ R  +    +L+  F ++  +++   ERY+  +    KS+
Sbjct: 243 KKTLQNLEEVLANTQKHLQESRNDKE---MLQLQFKKIKANYVCLQERYMTEMQQKNKSV 299

Query: 466 SPWKSPPQLRQFLPEE------FMKTLEKTGPQLTSRIKGDWIGLYRHFLKSPNFDGWFK 519
           S +    +      EE        K LEK        +K +     + FL         +
Sbjct: 300 SQYLEMDKTLSKKEEEVERLQQLKKELEKATASALDLLKREKEAQEQEFLSLQEEFQKLE 359

Query: 520 TRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLVLKLKNKLLQADREHLPVK 576
               E  QKL++   + L +   L ++ ++   + +    KL+ ++ +   E+  +K
Sbjct: 360 KENLEERQKLKSRLEKLLTQVRNLQFMSENERTKNI----KLQQQINEVKNENAKLK 412


>gi|4504063 golgin 97 [Homo sapiens]
          Length = 767

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 45/229 (19%), Positives = 101/229 (44%), Gaps = 25/229 (10%)

Query: 383 QVKVKKLKNLKTLDSKPGVYTSYKPYLNRDEEIIKQLQKGVQQKRPSEAQSVILRRYFLE 442
           + +V++L+  +TL +        K  +   E  I++L    Q+    + Q++ L + FLE
Sbjct: 353 ETRVRELE--QTLQASEEQLQQSKGIVAAQETQIQELAAANQESSHVQQQALALEQQFLE 410

Query: 443 LTQSF---IIPLER-YVASLMPLQKSISPWKSPPQLRQFLPEEFMKTLEKTGPQLTSRIK 498
            TQ+    I+ LER   A     ++ +   +      +    E+ ++L+    +L  ++K
Sbjct: 411 RTQALEAQIVALERTRAADQTTAEQGMRQLEQENAALKECRNEYERSLQNHQFEL-KKLK 469

Query: 499 GDWIGLYRHFLKSPNFDGWFKTRRKEMTQKLEALHLEALCEEDLLLWIQKHTEVETVDLV 558
            +W    R  +         + R++    + +A +L A+ +E      ++    E  +++
Sbjct: 470 EEW--SQREIVSVAMAQALEEVRKQREEFQQQAANLTAIIDE------KEQNLREKTEVL 521

Query: 559 LKLKNKLLQADREH---------LPVKPDTMEKLRTHIDAIILALPEDL 598
           L+ + ++LQ +R H         L  + + +  L+   +A ++A  EDL
Sbjct: 522 LQKEQEILQLERGHNSALLQIHQLQAELEALRTLKAE-EAAVVAEQEDL 569


>gi|109150419 missing oocyte, meiosis regulator, homolog [Homo
           sapiens]
          Length = 875

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 13/53 (24%), Positives = 23/53 (43%)

Query: 11  PGSRRPLDEAVAGAEGREAPALVAAGGAPEDDEEDDGRGRGLLRWDSFSAWLH 63
           PG R+PL            P     GG   D++ D  + + L +++++  W H
Sbjct: 776 PGCRKPLPRCALCLINMGTPVSSCPGGTKSDEKVDLSKDKKLAQFNNWFTWCH 828


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.139    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,013,394
Number of Sequences: 37866
Number of extensions: 1203477
Number of successful extensions: 3383
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3376
Number of HSP's gapped (non-prelim): 16
length of query: 608
length of database: 18,247,518
effective HSP length: 108
effective length of query: 500
effective length of database: 14,157,990
effective search space: 7078995000
effective search space used: 7078995000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.