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Search of human proteins with 32483410
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32483410 vitamin D-binding protein precursor [Homo sapiens]
(474 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32483410 vitamin D-binding protein precursor [Homo sapiens] 969 0.0
gi|4502027 albumin preproprotein [Homo sapiens] 151 1e-36
gi|4501987 afamin precursor [Homo sapiens] 120 2e-27
gi|4501989 alpha-fetoprotein precursor [Homo sapiens] 106 5e-23
gi|4826694 integral membrane protein DGCR2 [Homo sapiens] 32 0.96
gi|130980075 centromere protein J [Homo sapiens] 32 0.96
gi|191252801 WDFY family member 4 [Homo sapiens] 30 4.8
gi|26190614 rhotekin 2 [Homo sapiens] 30 4.8
gi|169207319 PREDICTED: hypothetical protein [Homo sapiens] 30 6.2
gi|169207756 PREDICTED: hypothetical protein [Homo sapiens] 30 6.2
gi|169207046 PREDICTED: hypothetical protein [Homo sapiens] 30 6.2
gi|33286418 pyruvate kinase, muscle isoform M2 [Homo sapiens] 29 8.1
gi|33286422 pyruvate kinase, muscle isoform M1 [Homo sapiens] 29 8.1
gi|33286420 pyruvate kinase, muscle isoform M1 [Homo sapiens] 29 8.1
gi|169218111 PREDICTED: similar to pyruvate kinase, muscle [Homo... 29 8.1
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 29 8.1
gi|116686120 periaxin isoform 2 [Homo sapiens] 29 8.1
gi|110347437 latent transforming growth factor beta binding prot... 29 8.1
gi|110347412 latent transforming growth factor beta binding prot... 29 8.1
gi|110347431 latent transforming growth factor beta binding prot... 29 8.1
gi|14589929 protocadherin 18 precursor [Homo sapiens] 29 8.1
gi|30794372 polybromo 1 isoform 1 [Homo sapiens] 29 8.1
gi|93102371 polybromo 1 isoform 2 [Homo sapiens] 29 8.1
gi|41281917 polybromo 1 isoform 4 [Homo sapiens] 29 8.1
>gi|32483410 vitamin D-binding protein precursor [Homo sapiens]
Length = 474
Score = 969 bits (2506), Expect = 0.0
Identities = 474/474 (100%), Positives = 474/474 (100%)
Query: 1 MKRVLVLLLAVAFGHALERGRDYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQV 60
MKRVLVLLLAVAFGHALERGRDYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQV
Sbjct: 1 MKRVLVLLLAVAFGHALERGRDYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQV 60
Query: 61 SQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAECCTKEGLERK 120
SQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAECCTKEGLERK
Sbjct: 61 SQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAECCTKEGLERK 120
Query: 121 LCMAALKHQPQEFPTYVEPTNDEICEAFRKDPKEYANQFMWEYSTNYGQAPLSLLVSYTK 180
LCMAALKHQPQEFPTYVEPTNDEICEAFRKDPKEYANQFMWEYSTNYGQAPLSLLVSYTK
Sbjct: 121 LCMAALKHQPQEFPTYVEPTNDEICEAFRKDPKEYANQFMWEYSTNYGQAPLSLLVSYTK 180
Query: 181 SYLSMVGSCCTSASPTVCFLKERLQLKHLSLLTTLSNRVCSQYAAYGEKKSRLSNLIKLA 240
SYLSMVGSCCTSASPTVCFLKERLQLKHLSLLTTLSNRVCSQYAAYGEKKSRLSNLIKLA
Sbjct: 181 SYLSMVGSCCTSASPTVCFLKERLQLKHLSLLTTLSNRVCSQYAAYGEKKSRLSNLIKLA 240
Query: 241 QKVPTADLEDVLPLAEDITNILSKCCESASEDCMAKELPEHTVKLCDNLSTKNSKFEDCC 300
QKVPTADLEDVLPLAEDITNILSKCCESASEDCMAKELPEHTVKLCDNLSTKNSKFEDCC
Sbjct: 241 QKVPTADLEDVLPLAEDITNILSKCCESASEDCMAKELPEHTVKLCDNLSTKNSKFEDCC 300
Query: 301 QEKTAMDVFVCTYFMPAAQLPELPDVELPTNKDVCDPGNTKVMDKYTFELSRRTHLPEVF 360
QEKTAMDVFVCTYFMPAAQLPELPDVELPTNKDVCDPGNTKVMDKYTFELSRRTHLPEVF
Sbjct: 301 QEKTAMDVFVCTYFMPAAQLPELPDVELPTNKDVCDPGNTKVMDKYTFELSRRTHLPEVF 360
Query: 361 LSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKELSSFIDKGQELCADYSENTFTEYKK 420
LSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKELSSFIDKGQELCADYSENTFTEYKK
Sbjct: 361 LSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKELSSFIDKGQELCADYSENTFTEYKK 420
Query: 421 KLAERLKAKLPDATPTELAKLVNKHSDFASNCCSINSPPLYCDSEIDAELKNIL 474
KLAERLKAKLPDATPTELAKLVNKHSDFASNCCSINSPPLYCDSEIDAELKNIL
Sbjct: 421 KLAERLKAKLPDATPTELAKLVNKHSDFASNCCSINSPPLYCDSEIDAELKNIL 474
>gi|4502027 albumin preproprotein [Homo sapiens]
Length = 609
Score = 151 bits (382), Expect = 1e-36
Identities = 114/468 (24%), Positives = 206/468 (44%), Gaps = 21/468 (4%)
Query: 1 MKRVLVLLLAVAFGHALERG---RDYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTF 57
MK V + L F A RG RD K++V F LG+E+F +L L+ +++ F
Sbjct: 1 MKWVTFISLLFLFSSAYSRGVFRRDAHKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPF 60
Query: 58 EQVSQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAECCTKEGL 117
E +LV EV + C A+ + +C + + K C + + A+CC K+
Sbjct: 61 EDHVKLVNEVTEFAKTCVADESAENCDKSLHTLFGDKLCTVATLRETYGEMADCCAKQEP 120
Query: 118 ERKLCMAALKHQPQEFPTYVEPTNDEICEAFRKDPKEYANQFMWEYSTNYGQAPLSLLVS 177
ER C K P V P D +C AF + + + ++++E + + L+
Sbjct: 121 ERNECFLQHKDDNPNLPRLVRPEVDVMCTAFHDNEETFLKKYLYEIARRHPYFYAPELLF 180
Query: 178 YTKSYLSMVGSCCTSASPTVCFLKERLQLKHLSLLTTLSNRV-CSQYAAYGEKKSRLSNL 236
+ K Y + CC +A C L + +L+ ++ R+ C+ +GE+ + +
Sbjct: 181 FAKRYKAAFTECCQAADKAACLLPKLDELRDEGKASSAKQRLKCASLQKFGERAFKAWAV 240
Query: 237 IKLAQKVPTADLEDVLPLAEDITNILSKCCESASEDCMAKELPEHTVKLCDNLSTKNSKF 296
+L+Q+ P A+ +V L D+T + ++CC +C A + + +C+N + +SK
Sbjct: 241 ARLSQRFPKAEFAEVSKLVTDLTKVHTECCHGDLLEC-ADDRADLAKYICENQDSISSKL 299
Query: 297 EDCCQEKTAMDVFVCTYFMPAAQLP-ELPDV--ELPTNKDVCD---PGNTKVMDKYTFEL 350
++CC EK ++ C + ++P +LP + + +KDVC + + +E
Sbjct: 300 KECC-EKPLLEKSHCIAEVENDEMPADLPSLAADFVESKDVCKNYAEAKDVFLGMFLYEY 358
Query: 351 SRR-THLPEVFLSKVLEPTLKSLGECCDVEDSTTC----FNAKGPLLKKELSSFIDKGQE 405
+RR V L ++ + +L +CC D C F+ PL+ +E + I + E
Sbjct: 359 ARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKVFDEFKPLV-EEPQNLIKQNCE 417
Query: 406 LCADYSENTFTEYKKKLAERLKAKLPDATPTELAKLVNKHSDFASNCC 453
L E F + L R K+P + L ++ S CC
Sbjct: 418 LFEQLGEYKF---QNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKCC 462
Score = 103 bits (256), Expect = 4e-22
Identities = 88/389 (22%), Positives = 164/389 (42%), Gaps = 38/389 (9%)
Query: 29 CKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACCAEGADPDCYDTRT 88
C G+ F + ++ S++FP F +VS+LV ++ + CC G +C D R
Sbjct: 224 CASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTECC-HGDLLECADDRA 282
Query: 89 SALSAKSCESNSPFPVHPGTAECCTKEGLERKLCMAALKHQ--PQEFPT----YVEPTND 142
L+ CE+ + ECC K LE+ C+A +++ P + P+ +VE +
Sbjct: 283 D-LAKYICENQDS--ISSKLKECCEKPLLEKSHCIAEVENDEMPADLPSLAADFVE--SK 337
Query: 143 EICEAFRKDPKEYANQFMWEYSTNYGQAPLSLLVSYTKSYLSMVGSCCTSASPTVCFLKE 202
++C+ + + + F++EY+ + + LL+ K+Y + + CC +A P C+ K
Sbjct: 338 DVCKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKCCAAADPHECYAKV 397
Query: 203 RLQLKHL-SLLTTLSNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLPLAEDITNI 261
+ K L L + C + GE K + + L++ +KVP ++ ++ ++ +
Sbjct: 398 FDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKV 457
Query: 262 LSKCC---ESASEDCMAKELPEHTVKLC--DNLSTKNSKFEDCCQEKTAMDVFVCTYFMP 316
SKCC E+ C L +LC + + + CC E P
Sbjct: 458 GSKCCKHPEAKRMPCAEDYLSVVLNQLCVLHEKTPVSDRVTKCCTESLVNR-------RP 510
Query: 317 AAQLPELPDVELPT---------NKDVCD-PGNTKVMDKYTFELSRRTHLPEVF---LSK 363
E+ + +P + D+C + + K T + H P+ L
Sbjct: 511 CFSALEVDETYVPKEFNAETFTFHADICTLSEKERQIKKQTALVELVKHKPKATKEQLKA 570
Query: 364 VLEPTLKSLGECCDVEDSTTCFNAKGPLL 392
V++ + +CC +D TCF +G L
Sbjct: 571 VMDDFAAFVEKCCKADDKETCFAEEGKKL 599
>gi|4501987 afamin precursor [Homo sapiens]
Length = 599
Score = 120 bits (302), Expect = 2e-27
Identities = 95/447 (21%), Positives = 185/447 (41%), Gaps = 19/447 (4%)
Query: 21 RDYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACCAEGAD 80
RD E ++F +++ ++++ +++ TFE++ +LVK++V + C A+
Sbjct: 27 RDIENFNSTQKFI---EDNIEYITIIAFAQYVQEATFEEMEKLVKDMVEYKDRCMADKTL 83
Query: 81 PDCYDTRTSALSAKSCESNSPFPVHPGTAECCTKEGLERKLCMAALKHQPQEF-PTYVEP 139
P+C + L K C P + CC+K +R+LC K F P +
Sbjct: 84 PECSKLPNNVLQEKICAMEG-LPQKHNFSHCCSKVDAQRRLCFFYNKKSDVGFLPPFPTL 142
Query: 140 TNDEICEAFRKDPKEYANQFMWEYSTNYGQAPLSLLVSYTKSYLSMVGSCCTSASPTVCF 199
+E C+A+ + + N F++E + L++ + + SCC + C
Sbjct: 143 DPEEKCQAYESNRESLLNHFLYEVARRNPFVFAPTLLTVAVHFEEVAKSCCEEQNKVNCL 202
Query: 200 LKERLQL-KHLSLLTTLSNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLPLAEDI 258
+ + ++L ++ VC +G K + L+QK P + ++++ L ED+
Sbjct: 203 QTRAIPVTQYLKAFSSYQKHVCGALLKFGTKVVHFIYIAILSQKFPKIEFKELISLVEDV 262
Query: 259 TNILSKCCESASEDCMAKELPEHTVKLCDNLSTKNSKFEDCCQEKTAMDVFVCTYFMPAA 318
++ CCE C+ ++ + +C + +SK ++CC EK + C
Sbjct: 263 SSNYDGCCEGDVVQCI-RDTSKVMNHICSKQDSISSKIKECC-EKKIPERGQCIINSNKD 320
Query: 319 QLPE---LPDVELPTNKDVC---DPGNTKVMDKYTFELSRR---THLPEVFLSKVLEPTL 369
P+ L + + +++VC D K+TFE SRR +PE L ++++
Sbjct: 321 DRPKDLSLREGKFTDSENVCQERDADPDTFFAKFTFEYSRRHPDLSIPE--LLRIVQIYK 378
Query: 370 KSLGECCDVEDSTTCFNAKGPLLKKELSSFIDKGQELCADYSENTFTEYKKKLAERLKAK 429
L CC+ E+ C+ + + Q+ C + K RL
Sbjct: 379 DLLRNCCNTENPPGCYRYAEDKFNETTEKSLKMVQQECKHFQNLGKDGLKYHYLIRLTKI 438
Query: 430 LPDATPTELAKLVNKHSDFASNCCSIN 456
P + EL L K + CC+++
Sbjct: 439 APQLSTEELVSLGEKMVTAFTTCCTLS 465
Score = 86.3 bits (212), Expect = 6e-17
Identities = 82/396 (20%), Positives = 159/396 (40%), Gaps = 21/396 (5%)
Query: 10 AVAFGHALERGRDYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVS 69
A+ L+ Y+K+ VC G + + + + S+KFP F+++ LV++V S
Sbjct: 206 AIPVTQYLKAFSSYQKH-VCGALLKFGTKVVHFIYIAILSQKFPKIEFKELISLVEDVSS 264
Query: 70 LTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAECCTKEGLERKLCM--AALK 127
+ CC EG C + ++ + +S + ECC K+ ER C+ +
Sbjct: 265 NYDGCC-EGDVVQCIRDTSKVMNHICSKQDS---ISSKIKECCEKKIPERGQCIINSNKD 320
Query: 128 HQPQEFPTYVEPTNDE--ICEAFRKDPKEYANQFMWEYSTNYGQAPLSLLVSYTKSYLSM 185
+P++ D +C+ DP + +F +EYS + + L+ + Y +
Sbjct: 321 DRPKDLSLREGKFTDSENVCQERDADPDTFFAKFTFEYSRRHPDLSIPELLRIVQIYKDL 380
Query: 186 VGSCCTSASPTVCFLKERLQLKHLSLLTT-LSNRVCSQYAAYGEKKSRLSNLIKLAQKVP 244
+ +CC + +P C+ + + + + + C + G+ + LI+L + P
Sbjct: 381 LRNCCNTENPPGCYRYAEDKFNETTEKSLKMVQQECKHFQNLGKDGLKYHYLIRLTKIAP 440
Query: 245 TADLEDVLPLAEDITNILSKCCESASEDCMAKELPEHTV-KLC--DNLSTKNSKFEDCCQ 301
E+++ L E + + CC + E L + +LC + T N + CC+
Sbjct: 441 QLSTEELVSLGEKMVTAFTTCCTLSEEFACVDNLADLVFGELCGVNENRTINPAVDHCCK 500
Query: 302 EKTAMDVFVCTYFMPAAQL---PELPDVELPTNKDVCDPGNTKVM---DKYTFELSRRTH 355
A C + A + P + D+C N ++ D++ L + H
Sbjct: 501 TNFAFRR-PCFESLKADKTYVPPPFSQDLFTFHADMCQSQNEELQRKTDRFLVNLVKLKH 559
Query: 356 -LPEVFLSKVLEPTLKSLGECCDVEDSTTCFNAKGP 390
L + L + + +CC E CFN + P
Sbjct: 560 ELTDEELQSLFTNFANVVDKCCKAESPEVCFNEESP 595
Score = 40.0 bits (92), Expect = 0.005
Identities = 75/359 (20%), Positives = 134/359 (37%), Gaps = 50/359 (13%)
Query: 133 FPTYVEPTNDEICEAFRKDPKEYANQFMWEYST-NYGQAPLSLLVSYTKSYLSMVG---- 187
F YV+ E E KD EY ++ M + + + P ++L + +M G
Sbjct: 51 FAQYVQEATFEEMEKLVKDMVEYKDRCMADKTLPECSKLPNNVL---QEKICAMEGLPQK 107
Query: 188 ----SCCTS--ASPTVCFL-KERLQLKHLSLLTTLSNRVCSQYAAYGEKKSRLSN--LIK 238
CC+ A +CF ++ + L TL Q AY + L N L +
Sbjct: 108 HNFSHCCSKVDAQRRLCFFYNKKSDVGFLPPFPTLDPEEKCQ--AYESNRESLLNHFLYE 165
Query: 239 LAQKVPTADLEDVLPLAEDITNILSKCCESASE-DCMAKELPEHTVKLCDNLSTKNSKFE 297
+A++ P +L +A + CCE ++ +C L + + L +S +
Sbjct: 166 VARRNPFVFAPTLLTVAVHFEEVAKSCCEEQNKVNC----LQTRAIPVTQYLKAFSSYQK 221
Query: 298 DCCQEKTAMDVFVCTYFMPAAQLPELPDVE----------LPTNKDVCDPGNTKVMDKYT 347
C V + A + P +E + +N D C G+ + T
Sbjct: 222 HVCGALLKFGTKVVHFIYIAILSQKFPKIEFKELISLVEDVSSNYDGCCEGDVVQCIRDT 281
Query: 348 FELSRRTHLPEVFLSKVLEPTLKSLGECCDV---EDSTTCFNAKGPLLKKELS----SFI 400
++ + +S ++ ECC+ E N+ K+LS F
Sbjct: 282 SKVMNHICSKQDSISSKIK-------ECCEKKIPERGQCIINSNKDDRPKDLSLREGKFT 334
Query: 401 DKGQELCADYSENTFTEYKKKLAERLKAKLPDATPTELAKLVNKHSDFASNCCSINSPP 459
D + +C + + T + K E + + PD + EL ++V + D NCC+ +PP
Sbjct: 335 DS-ENVCQERDADPDTFFAKFTFEYSR-RHPDLSIPELLRIVQIYKDLLRNCCNTENPP 391
>gi|4501989 alpha-fetoprotein precursor [Homo sapiens]
Length = 609
Score = 106 bits (264), Expect = 5e-23
Identities = 98/481 (20%), Positives = 195/481 (40%), Gaps = 25/481 (5%)
Query: 5 LVLLLAVAFGHALERGRDYEKNKVCKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLV 64
L+ LL L R +Y + + + L+ + +++ T+++VS++V
Sbjct: 9 LIFLLNFTESRTLHRN-EYGIASILDSYQCTAEISLADLATIFFAQFVQEATYKEVSKMV 67
Query: 65 KEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAECCTKEGLERKLC-M 123
K+ ++ E + C + + A + C + G ++CC++ R C +
Sbjct: 68 KDALTAIEKPTGDEQSSGCLENQLPAFLEELCHEKEILEKY-GHSDCCSQSEEGRHNCFL 126
Query: 124 AALKHQPQEFPTYVEPTNDEICEAFRKDPKEYANQFMWEYSTNYGQAPLSLLVSYTKSYL 183
A K P P + P CEA+ +D + + N+F++E + + ++ + Y
Sbjct: 127 AHKKPTPASIPLFQVPEPVTSCEAYEEDRETFMNKFIYEIARRHPFLYAPTILLWAARYD 186
Query: 184 SMVGSCCTSASPTVCF-LKERLQLKHLSLLTTLSNRVCSQYAAYGEKKSRLSNLIKLAQK 242
++ SCC + + CF K K L + L+ C+ +G + + + KL+QK
Sbjct: 187 KIIPSCCKAENAVECFQTKAATVTKELRESSLLNQHACAVMKNFGTRTFQAITVTKLSQK 246
Query: 243 VPTADLEDVLPLAEDITNILSKCCESASEDCMAKELPEHTVKLCDNLSTKNSKFEDCCQE 302
+ ++ L D+ ++ CC DC+ ++ + +C T ++K +CC +
Sbjct: 247 FTKVNFTEIQKLVLDVAHVHEHCCRGDVLDCL-QDGEKIMSYICSQQDTLSNKITECC-K 304
Query: 303 KTAMDVFVCTYFMPAAQLPELPDVELPTNKDVCD-------PGNTKV-MDKYTFELSRR- 353
T ++ C + PE L N+ + D G + + + E SRR
Sbjct: 305 LTTLERGQCIIHAENDEKPEGLSPNL--NRFLGDRDFNQFSSGEKNIFLASFVHEYSRRH 362
Query: 354 THLPEVFLSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKELSSFIDKGQEL----CAD 409
L + +V + + L +C E+ C KG ++EL +I + Q L C
Sbjct: 363 PQLAVSVILRVAKGYQELLEKCFQTENPLEC-QDKG---EEELQKYIQESQALAKRSCGL 418
Query: 410 YSENTFTEYKKKLAERLKAKLPDATPTELAKLVNKHSDFASNCCSINSPPLYCDSEIDAE 469
+ + + K P T +EL + K + A+ CC ++ L E A+
Sbjct: 419 FQKLGEYYLQNAFLVAYTKKAPQLTSSELMAITRKMAATAATCCQLSEDKLLACGEGAAD 478
Query: 470 L 470
+
Sbjct: 479 I 479
Score = 77.8 bits (190), Expect = 2e-14
Identities = 80/386 (20%), Positives = 150/386 (38%), Gaps = 32/386 (8%)
Query: 29 CKEFSHLGKEDFTSLSLVLYSRKFPSGTFEQVSQLVKEVVSLTEACCAEGADPDCYDTRT 88
C + G F ++++ S+KF F ++ +LV +V + E CC G DC
Sbjct: 224 CAVMKNFGTRTFQAITVTKLSQKFTKVNFTEIQKLVLDVAHVHEHCC-RGDVLDCLQDGE 282
Query: 89 SALSAKSCESNSPFPVHPGTAECCTKEGLERKLCMAALKHQPQEFPTYVEPT-----NDE 143
+S + ++ + ECC LER C+ + + E P + P D
Sbjct: 283 KIMSYICSQQDT---LSNKITECCKLTTLERGQCI--IHAENDEKPEGLSPNLNRFLGDR 337
Query: 144 ICEAFRKDPKE-YANQFMWEYSTNYGQAPLSLLVSYTKSYLSMVGSCCTSASPTVCFLKE 202
F K + F+ EYS + Q +S+++ K Y ++ C + +P C K
Sbjct: 338 DFNQFSSGEKNIFLASFVHEYSRRHPQLAVSVILRVAKGYQELLEKCFQTENPLECQDKG 397
Query: 203 RLQL-KHLSLLTTLSNRVCSQYAAYGEKKSRLSNLIKLAQKVPTADLEDVLPLAEDITNI 261
+L K++ L+ R C + GE + + L+ +K P +++ + +
Sbjct: 398 EEELQKYIQESQALAKRSCGLFQKLGEYYLQNAFLVAYTKKAPQLTSSELMAITRKMAAT 457
Query: 262 LSKCCESASEDCMAKELPEHTV---KLC--DNLSTKNSKFEDCCQEKTA------MDVFV 310
+ CC+ + + +A + LC ++ N CC A + V
Sbjct: 458 AATCCQLSEDKLLACGEGAADIIIGHLCIRHEMTPVNPGVGQCCTSSYANRRPCFSSLVV 517
Query: 311 CTYFMPAAQLPELPDVELPTNKDVCDPGNTKVMD-KYTFELS---RRTHLPEVFLSKVLE 366
++P P D + +KD+C + K F ++ ++ + E L V+
Sbjct: 518 DETYVP----PAFSDDKFIFHKDLCQAQGVALQTMKQEFLINLVKQKPQITEEQLEAVIA 573
Query: 367 PTLKSLGECCDVEDSTTCFNAKGPLL 392
L +CC ++ CF +G L
Sbjct: 574 DFSGLLEKCCQGQEQEVCFAEEGQKL 599
>gi|4826694 integral membrane protein DGCR2 [Homo sapiens]
Length = 550
Score = 32.3 bits (72), Expect = 0.96
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 12/43 (27%)
Query: 112 CTKEGLERKLCMAALKHQPQEFPTYVEPTNDEICEAFRKDPKE 154
CT G E ++C+AAL +PQ C+ +RKDPKE
Sbjct: 296 CTCHGGEPEMCVAALCERPQG------------CQQYRKDPKE 326
>gi|130980075 centromere protein J [Homo sapiens]
Length = 1338
Score = 32.3 bits (72), Expect = 0.96
Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 15/151 (9%)
Query: 89 SALSAKSCESNSPFPVHPGTAEC-----CTKEGLERKLCMAALKHQPQEFPTYVEPTNDE 143
S L + ESN+P+ +E C K+G + C +A HQ + ++ E
Sbjct: 73 SLLEEQKLESNNPYKPQSDKSETHTAFPCIKKGPQVAACHSAPGHQEENKNDFIPDLASE 132
Query: 144 ICEAFRKDP-------KEYANQFMWEYSTNYGQAPLSLLVSYTKSYLSMVGSCCTSASPT 196
E KDP + Q E L L+ + L+MV CT P
Sbjct: 133 FKEGAYKDPLFKKLEQLKEVQQKKQEQLKRQQLEQLQRLMEEQEKLLTMVSGQCT--LPG 190
Query: 197 VCFLKERLQLKHLSL-LTTLSNRVCSQYAAY 226
+ L + KH S TT R + +Y
Sbjct: 191 LSLLPDDQSQKHRSPGNTTTGERATCCFPSY 221
>gi|191252801 WDFY family member 4 [Homo sapiens]
Length = 3184
Score = 30.0 bits (66), Expect = 4.8
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 8/67 (11%)
Query: 188 SCCTSASPTVCFLKERLQLKHLSLLTTLSNRVCSQYAAYGEKKSRLSNLIKLAQKVPTAD 247
SCC PT C L+ + ++LS++ L C + + L NL +L +P +
Sbjct: 232 SCCFWKEPTFCVLRAISKAQNLSIIQYLQATDCVRLS--------LQNLSRLTDTLPAPE 283
Query: 248 LEDVLPL 254
+ + + L
Sbjct: 284 VSEAVSL 290
>gi|26190614 rhotekin 2 [Homo sapiens]
Length = 609
Score = 30.0 bits (66), Expect = 4.8
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 380 DSTTCFNAKGPLLKKELSSFIDKGQELCADYSENTFTEYKKKLAERLKAKLPDATPTELA 439
++ T FN GP + ++ + C + E++ T KKLA++LK + AT +++
Sbjct: 158 ENVTIFNEAGPDFQIKVEVY-----SCCTE--ESSITNTPKKLAKKLKTSISKATGKKIS 210
Query: 440 KLVNKHSD 447
++ + D
Sbjct: 211 SVLQEEDD 218
>gi|169207319 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 29.6 bits (65), Expect = 6.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 377 DVEDSTTCFNAKGPLLKKELSSFIDKGQELCADYSENTFTEYKKKLAERLKAKLPDATPT 436
D+ C L++KE + ++ + QEL A +E T K++ K K D T
Sbjct: 208 DIALQKKCIQEAEELMEKERAEYLIRKQELTAQINEFENTREVKRMETYQKKKELDKLQT 267
Query: 437 ELAKL 441
+++K+
Sbjct: 268 KMSKI 272
>gi|169207756 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 29.6 bits (65), Expect = 6.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 377 DVEDSTTCFNAKGPLLKKELSSFIDKGQELCADYSENTFTEYKKKLAERLKAKLPDATPT 436
D+ C L++KE + ++ + QEL A +E T K++ K K D T
Sbjct: 208 DIALQKKCIQEAEELMEKERAEYLIRKQELTAQINEFENTREVKRMETYQKKKELDKLQT 267
Query: 437 ELAKL 441
+++K+
Sbjct: 268 KMSKI 272
>gi|169207046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 828
Score = 29.6 bits (65), Expect = 6.2
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 377 DVEDSTTCFNAKGPLLKKELSSFIDKGQELCADYSENTFTEYKKKLAERLKAKLPDATPT 436
D+ C L++KE + ++ + QEL A +E T K++ K K D T
Sbjct: 208 DIALQKKCIQEAEELMEKERAEYLIRKQELTAQINEFENTREVKRMETYQKKKELDKLQT 267
Query: 437 ELAKL 441
+++K+
Sbjct: 268 KMSKI 272
>gi|33286418 pyruvate kinase, muscle isoform M2 [Homo sapiens]
Length = 531
Score = 29.3 bits (64), Expect = 8.1
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 52 FPSGTFEQVSQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAEC 111
F GT E ++ +K V + TE+ + DP Y AL K E + GTAE
Sbjct: 76 FSHGTHEYHAETIKNVRTATESFAS---DPILYRPVAVALDTKGPEIRTGLIKGSGTAEV 132
Query: 112 CTKEGLERKLCM 123
K+G K+ +
Sbjct: 133 ELKKGATLKITL 144
>gi|33286422 pyruvate kinase, muscle isoform M1 [Homo sapiens]
Length = 531
Score = 29.3 bits (64), Expect = 8.1
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 52 FPSGTFEQVSQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAEC 111
F GT E ++ +K V + TE+ + DP Y AL K E + GTAE
Sbjct: 76 FSHGTHEYHAETIKNVRTATESFAS---DPILYRPVAVALDTKGPEIRTGLIKGSGTAEV 132
Query: 112 CTKEGLERKLCM 123
K+G K+ +
Sbjct: 133 ELKKGATLKITL 144
>gi|33286420 pyruvate kinase, muscle isoform M1 [Homo sapiens]
Length = 531
Score = 29.3 bits (64), Expect = 8.1
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 52 FPSGTFEQVSQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAEC 111
F GT E ++ +K V + TE+ + DP Y AL K E + GTAE
Sbjct: 76 FSHGTHEYHAETIKNVRTATESFAS---DPILYRPVAVALDTKGPEIRTGLIKGSGTAEV 132
Query: 112 CTKEGLERKLCM 123
K+G K+ +
Sbjct: 133 ELKKGATLKITL 144
>gi|169218111 PREDICTED: similar to pyruvate kinase, muscle [Homo
sapiens]
Length = 364
Score = 29.3 bits (64), Expect = 8.1
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Query: 52 FPSGTFEQVSQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAEC 111
F GT E ++ +K V + TE+ + DP Y AL K E + GTAE
Sbjct: 76 FSHGTHEYHAETIKNVRTATESFAS---DPILYRPVAVALDTKGPEIRTGLIKGSGTAEV 132
Query: 112 CTKEGLERKLCM 123
K+G K+ +
Sbjct: 133 ELKKGATLKITL 144
>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
sapiens]
Length = 1037
Score = 29.3 bits (64), Expect = 8.1
Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
Query: 55 GTFEQVSQLVKEVVSLTEACCAEGADPDCYDTRTSALSAKSCESNSPFPVHPGTAECCTK 114
G + S L + T CA PD Y SA C + P EC K
Sbjct: 414 GVCQATSGLCQCAPGYTGPHCASLCPPDTYGVNCSA----RCSCENAIACSPIDGECVCK 469
Query: 115 EGLERKLC 122
EG +R C
Sbjct: 470 EGWQRGNC 477
>gi|116686120 periaxin isoform 2 [Homo sapiens]
Length = 1461
Score = 29.3 bits (64), Expect = 8.1
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 315 MPAAQLPELPDVELPTNKDVCDPGNTKVMDKYTFELSRRTHLPEVFLSKVLEPTLKSLGE 374
+P QLP++P+++LP K + + KV + ++ HLPEV L KV E L + E
Sbjct: 618 LPEVQLPKVPEMKLPEMK-LPEVKLPKVPEMAVPDV----HLPEVQLPKVPEMKLPKMPE 672
>gi|110347437 latent transforming growth factor beta binding protein 4
isoform c [Homo sapiens]
Length = 1557
Score = 29.3 bits (64), Expect = 8.1
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 20/127 (15%)
Query: 286 CDNLSTKNSKFEDCCQEKTAMDVFVCTY---FMPAAQLPELPDVELPTNKDVCDPGNTKV 342
CDN+ +N +++CC CT + ++ + P E + +C G +
Sbjct: 1126 CDNILARNVTWQECC----------CTVGEGWGSGCRIQQCPGTETAEYQSLCPHGRGYL 1175
Query: 343 MDKYTFELSRRTHLPEVFLSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKELSSFIDK 402
L R ++F +V + G C + +C+ + G + ID
Sbjct: 1176 APSGDLSLRRDVDECQLFRDQVCKS-----GVCVNTAPGYSCYCSNGYYYHTQRLECIDN 1230
Query: 403 GQELCAD 409
+ CAD
Sbjct: 1231 DE--CAD 1235
>gi|110347412 latent transforming growth factor beta binding protein 4
isoform b [Homo sapiens]
Length = 1587
Score = 29.3 bits (64), Expect = 8.1
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 20/127 (15%)
Query: 286 CDNLSTKNSKFEDCCQEKTAMDVFVCTY---FMPAAQLPELPDVELPTNKDVCDPGNTKV 342
CDN+ +N +++CC CT + ++ + P E + +C G +
Sbjct: 1156 CDNILARNVTWQECC----------CTVGEGWGSGCRIQQCPGTETAEYQSLCPHGRGYL 1205
Query: 343 MDKYTFELSRRTHLPEVFLSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKELSSFIDK 402
L R ++F +V + G C + +C+ + G + ID
Sbjct: 1206 APSGDLSLRRDVDECQLFRDQVCKS-----GVCVNTAPGYSCYCSNGYYYHTQRLECIDN 1260
Query: 403 GQELCAD 409
+ CAD
Sbjct: 1261 DE--CAD 1265
>gi|110347431 latent transforming growth factor beta binding protein 4
isoform a [Homo sapiens]
Length = 1624
Score = 29.3 bits (64), Expect = 8.1
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 20/127 (15%)
Query: 286 CDNLSTKNSKFEDCCQEKTAMDVFVCTY---FMPAAQLPELPDVELPTNKDVCDPGNTKV 342
CDN+ +N +++CC CT + ++ + P E + +C G +
Sbjct: 1193 CDNILARNVTWQECC----------CTVGEGWGSGCRIQQCPGTETAEYQSLCPHGRGYL 1242
Query: 343 MDKYTFELSRRTHLPEVFLSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKKELSSFIDK 402
L R ++F +V + G C + +C+ + G + ID
Sbjct: 1243 APSGDLSLRRDVDECQLFRDQVCKS-----GVCVNTAPGYSCYCSNGYYYHTQRLECIDN 1297
Query: 403 GQELCAD 409
+ CAD
Sbjct: 1298 DE--CAD 1302
>gi|14589929 protocadherin 18 precursor [Homo sapiens]
Length = 1135
Score = 29.3 bits (64), Expect = 8.1
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 314 FMPAAQLPELPDVELPTN--KDVCDP-------------GNTKVMDKYTFELSRRTHLPE 358
F+P + P P + P +D P G D+ T + S + L E
Sbjct: 948 FIPGEEFPTQPQQQHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSE 1007
Query: 359 V--FLSKVLEPTLKSLGECCDVEDSTTCFNAKGPLLKK 394
+ ++L P+L + EC +V+ S + KGPL K
Sbjct: 1008 MSSVFQRLLPPSLDTYSECSEVDRSNSLERRKGPLPAK 1045
>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
Length = 1602
Score = 29.3 bits (64), Expect = 8.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 241 QKVPTADLEDVLPLAEDITNILSKCCESASED---CMAKELPEHTVKLCDNLSTKNSK 295
++V ++LE+ P+ T IL KC + +D C E+PE+ + LC++ ++ K
Sbjct: 1181 KEVFLSNLEETCPM----TCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDK 1234
>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
Length = 1582
Score = 29.3 bits (64), Expect = 8.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 241 QKVPTADLEDVLPLAEDITNILSKCCESASED---CMAKELPEHTVKLCDNLSTKNSK 295
++V ++LE+ P+ T IL KC + +D C E+PE+ + LC++ ++ K
Sbjct: 1188 KEVFLSNLEETCPM----TCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDK 1241
>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
Length = 1582
Score = 29.3 bits (64), Expect = 8.1
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 241 QKVPTADLEDVLPLAEDITNILSKCCESASED---CMAKELPEHTVKLCDNLSTKNSK 295
++V ++LE+ P+ T IL KC + +D C E+PE+ + LC++ ++ K
Sbjct: 1213 KEVFLSNLEETCPM----TCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDK 1266
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.131 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,801,876
Number of Sequences: 37866
Number of extensions: 852916
Number of successful extensions: 2311
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2238
Number of HSP's gapped (non-prelim): 52
length of query: 474
length of database: 18,247,518
effective HSP length: 106
effective length of query: 368
effective length of database: 14,233,722
effective search space: 5238009696
effective search space used: 5238009696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.