Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 32454750
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32454750 origin recognition complex subunit 4 [Homo sapiens]
(436 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32454748 origin recognition complex subunit 4 [Homo sapiens] 862 0.0
gi|32454746 origin recognition complex subunit 4 [Homo sapiens] 862 0.0
gi|32454750 origin recognition complex subunit 4 [Homo sapiens] 862 0.0
gi|31795544 origin recognition complex, subunit 1 [Homo sapiens] 44 3e-04
gi|4502703 cell division cycle 6 protein [Homo sapiens] 37 0.046
gi|149363638 septin 8 isoform c [Homo sapiens] 33 0.39
gi|149363689 septin 8 isoform a [Homo sapiens] 33 0.39
gi|149363661 septin 8 isoform b [Homo sapiens] 33 0.39
gi|38505213 YTH domain containing 2 [Homo sapiens] 33 0.51
gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens] 31 1.9
gi|54792138 helicase with zinc finger domain [Homo sapiens] 31 1.9
gi|7242140 ClpX caseinolytic protease X homolog [Homo sapiens] 31 1.9
gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens] 31 1.9
gi|27262622 neuron navigator 1 [Homo sapiens] 31 1.9
gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa... 30 4.3
gi|34147403 intraflagellar transport 81-like isoform 2 [Homo sap... 30 4.3
gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap... 30 4.3
gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens] 30 4.3
gi|5031767 heat shock transcription factor 1 [Homo sapiens] 30 5.6
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 30 5.6
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 30 5.6
gi|38327572 serine/threonine protein kinase 6 [Homo sapiens] 29 7.3
gi|38327570 serine/threonine protein kinase 6 [Homo sapiens] 29 7.3
gi|38327568 serine/threonine protein kinase 6 [Homo sapiens] 29 7.3
gi|38327566 serine/threonine protein kinase 6 [Homo sapiens] 29 7.3
gi|38327564 serine/threonine protein kinase 6 [Homo sapiens] 29 7.3
gi|38327562 serine/threonine protein kinase 6 [Homo sapiens] 29 7.3
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 29 7.3
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 29 7.3
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens] 29 7.3
>gi|32454748 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 862 bits (2227), Expect = 0.0
Identities = 436/436 (100%), Positives = 436/436 (100%)
Query: 1 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
Sbjct: 1 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
Query: 61 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
Sbjct: 61 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
Query: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
Sbjct: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
Query: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
Sbjct: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
Query: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
Sbjct: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
Query: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
Sbjct: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
Query: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
Sbjct: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
Query: 421 CPTDVRQWATSSLSWL 436
CPTDVRQWATSSLSWL
Sbjct: 421 CPTDVRQWATSSLSWL 436
>gi|32454746 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 862 bits (2227), Expect = 0.0
Identities = 436/436 (100%), Positives = 436/436 (100%)
Query: 1 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
Sbjct: 1 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
Query: 61 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
Sbjct: 61 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
Query: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
Sbjct: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
Query: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
Sbjct: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
Query: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
Sbjct: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
Query: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
Sbjct: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
Query: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
Sbjct: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
Query: 421 CPTDVRQWATSSLSWL 436
CPTDVRQWATSSLSWL
Sbjct: 421 CPTDVRQWATSSLSWL 436
>gi|32454750 origin recognition complex subunit 4 [Homo sapiens]
Length = 436
Score = 862 bits (2227), Expect = 0.0
Identities = 436/436 (100%), Positives = 436/436 (100%)
Query: 1 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES
Sbjct: 1 MSSRKSKSNSLIHTECLSQVQRILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGES 60
Query: 61 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL
Sbjct: 61 NSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQINDKIALKEITRQLNL 120
Query: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS
Sbjct: 121 ENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLFAHHKNQTLLYNLFDIS 180
Query: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF
Sbjct: 181 QSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEF 240
Query: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV
Sbjct: 241 PDKVFAEKWNENVQYLSEDRSVQEVLQKHFNISKNLRSLHMLLMLALNRVTASHPFMTAV 300
Query: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK
Sbjct: 301 DLMEASQLCSMDSKANIVHGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQRK 360
Query: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN
Sbjct: 361 AHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYPN 420
Query: 421 CPTDVRQWATSSLSWL 436
CPTDVRQWATSSLSWL
Sbjct: 421 CPTDVRQWATSSLSWL 436
>gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]
Length = 861
Score = 43.9 bits (102), Expect = 3e-04
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 19/206 (9%)
Query: 43 QYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSE--NVLQVHLN 100
+++ + ++ L + I G G+GKT ++ ++ L + + ++ + +N
Sbjct: 510 EFQDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVN 569
Query: 101 GLLQINDKIALKEITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCP---VIFI 157
G+ +I L+ + G K + A L L K T P + +
Sbjct: 570 GMKLTEPHQVYVQI-----LQKLTGQKATANHAAEL------LAKQFCTRGSPQETTVLL 618
Query: 158 LDEFDLFAHHKNQTLLYNLFDISQSAQTPIAVIGLTCRLDILE-LLEKRVKSRFSHRQIH 216
+DE DL HK Q ++YNLFD + + V+ + +D+ E ++ RV SR ++
Sbjct: 619 VDELDLLWTHK-QDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTRM- 676
Query: 217 LMNSFGFPQYVKIFKEQLSLPAEFPD 242
+ + Q +I + +L F D
Sbjct: 677 CFQPYTYSQLQQILRSRLKHLKAFED 702
>gi|4502703 cell division cycle 6 protein [Homo sapiens]
Length = 560
Score = 36.6 bits (83), Expect = 0.046
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 59 ESNSVLIIGPRGSGKTMLINHAL----KELMEIEEVSENVLQVHLNGLL--QINDKIALK 112
++ S+ + G G+GKT ++ L KEL + + N + + + I +I +
Sbjct: 194 KAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQAVFPAIAQEICQE 253
Query: 113 EITRQLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCP-VIFILDEFDLFAHHKNQT 171
E++R + ++ L+K P ++ +LDE D K Q
Sbjct: 254 EVSRPAGKD-----------------MMRKLEKHMTAEKGPMIVLVLDEMDQL-DSKGQD 295
Query: 172 LLYNLFDISQSAQTPIAVIGLTCRLDILELLEKRVKSRFSHRQIHLMNSFGFPQYVK 228
+LY LF+ + + + +IG+ LD+ + + R+++R + L+N FP Y +
Sbjct: 296 VLYTLFEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKP-QLLN---FPPYTR 348
>gi|149363638 septin 8 isoform c [Homo sapiens]
Length = 442
Score = 33.5 bits (75), Expect = 0.39
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 26 ERF--CRQSPHSNLFGVQVQYKHL-SELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
ERF P S G V + L +L+ ++ G S ++L +G G GK+ L+N
Sbjct: 7 ERFSNAEPEPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFN 66
Query: 83 ELMEIEEVSENVLQVHL 99
E EE S + V L
Sbjct: 67 TTFETEEASHHEACVRL 83
>gi|149363689 septin 8 isoform a [Homo sapiens]
Length = 483
Score = 33.5 bits (75), Expect = 0.39
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 26 ERF--CRQSPHSNLFGVQVQYKHL-SELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
ERF P S G V + L +L+ ++ G S ++L +G G GK+ L+N
Sbjct: 7 ERFSNAEPEPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFN 66
Query: 83 ELMEIEEVSENVLQVHL 99
E EE S + V L
Sbjct: 67 TTFETEEASHHEACVRL 83
>gi|149363661 septin 8 isoform b [Homo sapiens]
Length = 429
Score = 33.5 bits (75), Expect = 0.39
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 26 ERF--CRQSPHSNLFGVQVQYKHL-SELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
ERF P S G V + L +L+ ++ G S ++L +G G GK+ L+N
Sbjct: 7 ERFSNAEPEPRSLSLGGHVGFDSLPDQLVSKSVTQGFSFNILCVGETGIGKSTLMNTLFN 66
Query: 83 ELMEIEEVSENVLQVHL 99
E EE S + V L
Sbjct: 67 TTFETEEASHHEACVRL 83
>gi|38505213 YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 33.1 bits (74), Expect = 0.51
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 28/157 (17%)
Query: 59 ESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVL-------QVHLNGLLQINDKIAL 111
E+ VLI+G GSGKT I L +++ +N + Q + + +++A
Sbjct: 208 ENKVVLIVGETGSGKTTQIPQFL-----LDDCFKNGIPCRIFCTQPRRLAAIAVAERVAA 262
Query: 112 KEITR-------QLNLENVVGDKVFGSFAENLSFLLEALKKGDRTSSCPVIFILDEFDLF 164
+ R Q+ LE+ V K +F N LL L GD T S I+DE
Sbjct: 263 ERRERIGQTIGYQIRLESRVSPKTLLTFCTN-GVLLRTLMAGDSTLSTVTHVIVDE---- 317
Query: 165 AHHKNQ---TLLYNLFDISQSAQTPIAVIGLTCRLDI 198
H +++ LL L D+ Q T + +I + LD+
Sbjct: 318 VHERDRFSDFLLTKLRDLLQKHPT-LKLILSSAALDV 353
>gi|239747580 PREDICTED: similar to NAV1 protein [Homo sapiens]
Length = 559
Score = 31.2 bits (69), Expect = 1.9
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 24 LRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKE 83
L+E+ L + ++S LLK L ++ GP G+GKT L N +
Sbjct: 204 LKEKCVDSLVFETLIPKPMMQHYISLLLKHRRL-------VLSGPSGTGKTYLTNRLAEY 256
Query: 84 LMEI--EEVSENVLQVHLNGLLQIND-KIALKEITRQLNLENVVGDKVFGSFAENLS 137
L+E EV+E ++ D ++ L + Q++ E +GD ++LS
Sbjct: 257 LVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLS 313
>gi|54792138 helicase with zinc finger domain [Homo sapiens]
Length = 1942
Score = 31.2 bits (69), Expect = 1.9
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 63 VLIIGPRGSGKTMLINHALKELMEIEE 89
VLIIGP G+GKT + A+K +++ +E
Sbjct: 664 VLIIGPYGTGKTFTLAQAVKHILQQQE 690
>gi|7242140 ClpX caseinolytic protease X homolog [Homo sapiens]
Length = 633
Score = 31.2 bits (69), Expect = 1.9
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 11/56 (19%)
Query: 32 SPHSNLFGVQVQY---------KHLSELLKRTA--LHGESNSVLIIGPRGSGKTML 76
SPH N G +Q K E+L + + E +++L++GP GSGKT+L
Sbjct: 247 SPHGNALGASMQQQVNQQIPQEKRGGEVLDSSHDDIKLEKSNILLLGPTGSGKTLL 302
>gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]
Length = 4646
Score = 31.2 bits (69), Expect = 1.9
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 59 ESNSVLIIGPRGSGKTMLINHALKELMEIEEVSEN 93
E +++ GP GSGKTM + AL+ L ++E V N
Sbjct: 2587 EHKPLVLCGPPGSGKTMTLFSALRALPDMEVVGLN 2621
>gi|27262622 neuron navigator 1 [Homo sapiens]
Length = 1874
Score = 31.2 bits (69), Expect = 1.9
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 10/117 (8%)
Query: 24 LRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKE 83
L+E+ L + ++S LLK L ++ GP G+GKT L N +
Sbjct: 1519 LKEKCVDSLVFETLIPKPMMQHYISLLLKHRRL-------VLSGPSGTGKTYLTNRLAEY 1571
Query: 84 LMEI--EEVSENVLQVHLNGLLQIND-KIALKEITRQLNLENVVGDKVFGSFAENLS 137
L+E EV+E ++ D ++ L + Q++ E +GD ++LS
Sbjct: 1572 LVERSGREVTEGIVSTFNMHQQSCKDLQLYLSNLANQIDRETGIGDVPLVILLDDLS 1628
>gi|219555661 intraflagellar transport 81-like isoform 1 [Homo
sapiens]
Length = 676
Score = 30.0 bits (66), Expect = 4.3
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 340 EEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREY 399
EE FN MV +F K ++ K ++ +K V A H LEL + N++
Sbjct: 268 EEIKFNLYMVTEKFPKELENKKKELHFLQKVVSEPAMGHSDLLELESKINEI--NTEINQ 325
Query: 400 QLMKLLLDNTQIMNALQKY 418
+ K ++ N I L Y
Sbjct: 326 LIEKKMMRNEPIEGKLSLY 344
>gi|34147403 intraflagellar transport 81-like isoform 2 [Homo
sapiens]
Length = 431
Score = 30.0 bits (66), Expect = 4.3
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 340 EEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREY 399
EE FN MV +F K ++ K ++ +K V A H LEL + N++
Sbjct: 268 EEIKFNLYMVTEKFPKELENKKKELHFLQKVVSEPAMGHSDLLELESKINEI--NTEINQ 325
Query: 400 QLMKLLLDNTQIMNALQKY 418
+ K ++ N I L Y
Sbjct: 326 LIEKKMMRNEPIEGKLSLY 344
>gi|32526901 intraflagellar transport 81-like isoform 1 [Homo
sapiens]
Length = 676
Score = 30.0 bits (66), Expect = 4.3
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Query: 340 EEEPFNFQMVYNEFQKFVQRKAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREY 399
EE FN MV +F K ++ K ++ +K V A H LEL + N++
Sbjct: 268 EEIKFNLYMVTEKFPKELENKKKELHFLQKVVSEPAMGHSDLLELESKINEI--NTEINQ 325
Query: 400 QLMKLLLDNTQIMNALQKY 418
+ K ++ N I L Y
Sbjct: 326 LIEKKMMRNEPIEGKLSLY 344
>gi|197927452 dynein, axonemal, heavy chain 1 [Homo sapiens]
Length = 4265
Score = 30.0 bits (66), Expect = 4.3
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 42 VQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVS 91
VQ HL ++L VL IGP G+GKT+ I+ L + + ++ +S
Sbjct: 2207 VQMSHLLDMLLTN-----KKPVLCIGPTGTGKTLTISDKLLKNLALDYIS 2251
>gi|5031767 heat shock transcription factor 1 [Homo sapiens]
Length = 529
Score = 29.6 bits (65), Expect = 5.6
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 28/161 (17%)
Query: 200 ELLEKRVKSRFSHRQIHLMNSFGFPQYVKIFKEQLSLPAEFPDKVFAEKWNENVQYLSED 259
E+L K K + +N +GF + V I + L P E+ + Q+
Sbjct: 55 EVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGGLVKP---------ERDDTEFQHPCFL 105
Query: 260 RSVQEVLQKHFNISKNLRSLHMLLMLALN-RVTASHPFMTAVDLMEASQLCSMDSKANIV 318
R +++L+ NI + + S+ L + R + +T V LM+ Q C MDSK
Sbjct: 106 RGQEQLLE---NIKRKVTSVSTLKSEDIKIRQDSVTKLLTDVQLMKGKQEC-MDSK---- 157
Query: 319 HGLSVLEICLIIAMKHLNDIYEEEPFNFQMVYNEFQKFVQR 359
++AMKH N+ E + + + + QK V +
Sbjct: 158 ----------LLAMKHENEALWREVASLRQKHAQQQKVVNK 188
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 29.6 bits (65), Expect = 5.6
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 23 ILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
+L+E + + + +V L K T L+ ++ + + + I H LK
Sbjct: 505 VLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEI-HDLK 563
Query: 83 ELMEIEEVSENVLQVHLNGLL-QINDK----IALKEITRQLNLENVVGDKVFGSFAENLS 137
++++++E NVLQ + L Q+ DK +LKE + L + D L+
Sbjct: 564 DMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTA-------LT 616
Query: 138 FLLEALKKGDRT 149
L EAL + +RT
Sbjct: 617 TLEEALAEKERT 628
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 29.6 bits (65), Expect = 5.6
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 23 ILRERFCRQSPHSNLFGVQVQYKHLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALK 82
+L+E + + + +V L K T L+ ++ + + + I H LK
Sbjct: 477 VLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQDMAEEKGTQAGEI-HDLK 535
Query: 83 ELMEIEEVSENVLQVHLNGLL-QINDK----IALKEITRQLNLENVVGDKVFGSFAENLS 137
++++++E NVLQ + L Q+ DK +LKE + L + D L+
Sbjct: 536 DMLDVKERKVNVLQKKIENLQEQLRDKEKQMSSLKERVKSLQADTTNTDTA-------LT 588
Query: 138 FLLEALKKGDRT 149
L EAL + +RT
Sbjct: 589 TLEEALAEKERT 600
>gi|38327572 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 29.3 bits (64), Expect = 7.3
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
+A + + KPV + + LQ + P+ R N+Q+ Q + +N K
Sbjct: 60 QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119
Query: 420 NCPTDVRQWA 429
N + RQWA
Sbjct: 120 NEESKKRQWA 129
>gi|38327570 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 29.3 bits (64), Expect = 7.3
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
+A + + KPV + + LQ + P+ R N+Q+ Q + +N K
Sbjct: 60 QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119
Query: 420 NCPTDVRQWA 429
N + RQWA
Sbjct: 120 NEESKKRQWA 129
>gi|38327568 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 29.3 bits (64), Expect = 7.3
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
+A + + KPV + + LQ + P+ R N+Q+ Q + +N K
Sbjct: 60 QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119
Query: 420 NCPTDVRQWA 429
N + RQWA
Sbjct: 120 NEESKKRQWA 129
>gi|38327566 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 29.3 bits (64), Expect = 7.3
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
+A + + KPV + + LQ + P+ R N+Q+ Q + +N K
Sbjct: 60 QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119
Query: 420 NCPTDVRQWA 429
N + RQWA
Sbjct: 120 NEESKKRQWA 129
>gi|38327564 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 29.3 bits (64), Expect = 7.3
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
+A + + KPV + + LQ + P+ R N+Q+ Q + +N K
Sbjct: 60 QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119
Query: 420 NCPTDVRQWA 429
N + RQWA
Sbjct: 120 NEESKKRQWA 129
>gi|38327562 serine/threonine protein kinase 6 [Homo sapiens]
Length = 403
Score = 29.3 bits (64), Expect = 7.3
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 360 KAHSVYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQREYQLMKLLLDNTQIMNALQKYP 419
+A + + KPV + + LQ + P+ R N+Q+ Q + +N K
Sbjct: 60 QAQKLVSSHKPVQNQKQKQLQATSVPHPVSRPLNNTQKSKQPLPSAPENNPEEELASKQK 119
Query: 420 NCPTDVRQWA 429
N + RQWA
Sbjct: 120 NEESKKRQWA 129
>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1723
Score = 29.3 bits (64), Expect = 7.3
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 315 ANIVHGL--SVLEICLIIAM--------KHLNDIYEEEPFNFQMVYNEFQKFVQR-KAHS 363
A I+H S +ICL +A K +N+I + E F+F V KA
Sbjct: 838 AKIIHHYVSSCQDICLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLTSIIVAVIKAEP 897
Query: 364 VYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQ 396
N PV A E L L +KP T NS+
Sbjct: 898 TDNLVSPVRALAMEALSHLSKLKPFYSTEENSE 930
>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1706
Score = 29.3 bits (64), Expect = 7.3
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 315 ANIVHGL--SVLEICLIIAM--------KHLNDIYEEEPFNFQMVYNEFQKFVQR-KAHS 363
A I+H S +ICL +A K +N+I + E F+F V KA
Sbjct: 835 AKIIHHYVSSCQDICLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLTSIIVAVIKAEP 894
Query: 364 VYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQ 396
N PV A E L L +KP T NS+
Sbjct: 895 TDNLVSPVRALAMEALSHLSKLKPFYSTEENSE 927
>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
Length = 1710
Score = 29.3 bits (64), Expect = 7.3
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 315 ANIVHGL--SVLEICLIIAM--------KHLNDIYEEEPFNFQMVYNEFQKFVQR-KAHS 363
A I+H S +ICL +A K +N+I + E F+F V KA
Sbjct: 835 AKIIHHYVSSCQDICLKMAFMKSVVQVTKAINNIKDLEDFHFAQKTTLTSIIVAVIKAEP 894
Query: 364 VYNFEKPVVMKAFEHLQQLELIKPMERTSGNSQ 396
N PV A E L L +KP T NS+
Sbjct: 895 TDNLVSPVRALAMEALSHLSKLKPFYSTEENSE 927
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,397,468
Number of Sequences: 37866
Number of extensions: 572291
Number of successful extensions: 1856
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1834
Number of HSP's gapped (non-prelim): 47
length of query: 436
length of database: 18,247,518
effective HSP length: 105
effective length of query: 331
effective length of database: 14,271,588
effective search space: 4723895628
effective search space used: 4723895628
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.