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Search of human proteins with 32307175
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|32307175 KIAA1737 protein [Homo sapiens]
(399 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|32307175 KIAA1737 protein [Homo sapiens] 786 0.0
gi|236459851 ubinuclein 2 [Homo sapiens] 42 7e-04
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 42 0.001
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 42 0.001
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 42 0.001
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 42 0.001
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 42 0.001
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 41 0.002
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 41 0.002
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 40 0.003
gi|22547121 tumor necrosis factor receptor superfamily, member 1... 40 0.004
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 40 0.004
gi|41281612 zinc finger protein 828 [Homo sapiens] 40 0.004
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 39 0.006
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 39 0.006
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 39 0.006
gi|39995080 hypothetical protein LOC79567 [Homo sapiens] 39 0.006
gi|167466190 forkhead box P3 isoform b [Homo sapiens] 39 0.008
gi|31982943 forkhead box P3 isoform a [Homo sapiens] 39 0.008
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 39 0.011
gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens] 39 0.011
gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens] 39 0.011
gi|4758532 ral guanine nucleotide dissociation stimulator-like 2... 39 0.011
gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens] 38 0.014
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 38 0.014
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 38 0.014
gi|154090979 hypothetical protein LOC57481 [Homo sapiens] 38 0.014
gi|15147240 brother of CDO [Homo sapiens] 38 0.014
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 38 0.018
gi|216547801 SH2 domain containing 3C isoform e [Homo sapiens] 38 0.018
>gi|32307175 KIAA1737 protein [Homo sapiens]
Length = 399
Score = 786 bits (2031), Expect = 0.0
Identities = 399/399 (100%), Positives = 399/399 (100%)
Query: 1 MERKNPSRESPRRLSAKVGKGTEMKKVARQLGMAAAESDKDSGFSDGSSECLSSAEQMES 60
MERKNPSRESPRRLSAKVGKGTEMKKVARQLGMAAAESDKDSGFSDGSSECLSSAEQMES
Sbjct: 1 MERKNPSRESPRRLSAKVGKGTEMKKVARQLGMAAAESDKDSGFSDGSSECLSSAEQMES 60
Query: 61 EDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEV 120
EDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEV
Sbjct: 61 EDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEV 120
Query: 121 ISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKG 180
ISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKG
Sbjct: 121 ISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKG 180
Query: 181 TSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSP 240
TSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSP
Sbjct: 181 TSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSP 240
Query: 241 QTLQPVSSSHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSSPLWAAEHLC 300
QTLQPVSSSHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSSPLWAAEHLC
Sbjct: 241 QTLQPVSSSHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSSPLWAAEHLC 300
Query: 301 RSPDIFSEQRQSKHRRFQNTLVVLHKSGLLEITLKTKELIRQNQATQVELDQLKEQTQLF 360
RSPDIFSEQRQSKHRRFQNTLVVLHKSGLLEITLKTKELIRQNQATQVELDQLKEQTQLF
Sbjct: 301 RSPDIFSEQRQSKHRRFQNTLVVLHKSGLLEITLKTKELIRQNQATQVELDQLKEQTQLF 360
Query: 361 IEATKSRAPQAWAKLQASLTPGSSNTGSDLEAFSDHPAI 399
IEATKSRAPQAWAKLQASLTPGSSNTGSDLEAFSDHPAI
Sbjct: 361 IEATKSRAPQAWAKLQASLTPGSSNTGSDLEAFSDHPAI 399
>gi|236459851 ubinuclein 2 [Homo sapiens]
Length = 1347
Score = 42.4 bits (98), Expect = 7e-04
Identities = 53/171 (30%), Positives = 71/171 (41%), Gaps = 14/171 (8%)
Query: 79 SKTAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVISAQPQLLFLHPPVPS-- 136
SK+ PT+SP N LV QGS SS QPS IS Q L L P +
Sbjct: 1077 SKSNPTPKPTVSPSSSSPNALVAQGSHSSTNSPVHKQPSGMNISRQSPTLNLLPSSRTSG 1136
Query: 137 --PVSPCHTGEKKSDSRNYLPI-LNSYTKIAPH-PGKRGLSLGPEEKGTSGVQKKICTER 192
P K ++S + + NS + IA + P RG +L +SG + +
Sbjct: 1137 LPPTKNLQAPSKLTNSSSTGTVGKNSLSGIAMNVPASRGSNL-----NSSGANRTSLSGG 1191
Query: 193 LGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTL 243
G + TK + P PST + S A + G SL+A SP TL
Sbjct: 1192 TGSGTQGA--TKPLSTPHRPSTASGSSVVTASVQSTAGA-SLLANASPLTL 1239
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.001
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 21/217 (9%)
Query: 44 FSDGSSECLSSAEQMESEDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQG 103
F ++ +SS E + + ++ L + + P TA P+ + + +
Sbjct: 131 FLPQNATTISSRENVNTSSSVATL--APVNSPAPQDTTAAPPTPSATTPAPPSSSAPPET 188
Query: 104 SSSSQLQSWTVQ--PSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYT 161
+++ S T Q PS S+ P PP P +P P S T
Sbjct: 189 TAAPPTPSATTQAPPS----SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSAT 244
Query: 162 KIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPS--TPAPPS 219
AP S PE T+ V L PS S+S P + A P +PS TPAPPS
Sbjct: 245 TPAPLSS----SAPPE---TTAVPPTPSATTLDPS-SASAPPETTAAPPTPSATTPAPPS 296
Query: 220 AKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPS 256
+ +++ P SP TL P +S + AP+
Sbjct: 297 SPAPQETT--AAPITTPNSSPTTLAP-DTSETSAAPT 330
Score = 37.4 bits (85), Expect = 0.024
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 15/179 (8%)
Query: 105 SSSQLQSWTVQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSY---- 160
+++Q+ S T + I+ P + FL P + +S S P+ +
Sbjct: 107 ATTQIPSVTFPSASTKITTLPNVTFL-PQNATTISSRENVNTSSSVATLAPVNSPAPQDT 165
Query: 161 -----TKIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPST- 214
T A P S PE T+ T + PS SS+ P A P+ P+T
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPET--TAAPPTPSATTQAPPS-SSAPPETTAAPPTPPATT 222
Query: 215 PAPPSAKLA-EDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPSLTFASPASPVCASDST 272
PAPPS+ E +A PS + P ++ V PS T P+S ++T
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETT 281
Score = 37.0 bits (84), Expect = 0.031
Identities = 43/178 (24%), Positives = 61/178 (34%), Gaps = 28/178 (15%)
Query: 120 VISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEK 179
V S PQ PP PS +P P S T AP S P
Sbjct: 157 VNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPS-----SSAP--- 208
Query: 180 GTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGS 239
P +++ PT P+ PS+ APP A + P+ ++ +
Sbjct: 209 ---------------PETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSA 253
Query: 240 P--QTLQPVSSSHVAKAPSLTFASP---ASPVCASDSTLHGLESNSPLSPLSANYSSP 292
P T P + S PS A P A+P S +T S +P +A ++P
Sbjct: 254 PPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTP 311
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.001
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 21/217 (9%)
Query: 44 FSDGSSECLSSAEQMESEDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQG 103
F ++ +SS E + + ++ L + + P TA P+ + + +
Sbjct: 131 FLPQNATTISSRENVNTSSSVATL--APVNSPAPQDTTAAPPTPSATTPAPPSSSAPPET 188
Query: 104 SSSSQLQSWTVQ--PSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYT 161
+++ S T Q PS S+ P PP P +P P S T
Sbjct: 189 TAAPPTPSATTQAPPS----SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSAT 244
Query: 162 KIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPS--TPAPPS 219
AP S PE T+ V L PS S+S P + A P +PS TPAPPS
Sbjct: 245 TPAPLSS----SAPPE---TTAVPPTPSATTLDPS-SASAPPETTAAPPTPSATTPAPPS 296
Query: 220 AKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPS 256
+ +++ P SP TL P +S + AP+
Sbjct: 297 SPAPQETT--AAPITTPNSSPTTLAP-DTSETSAAPT 330
Score = 37.4 bits (85), Expect = 0.024
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 15/179 (8%)
Query: 105 SSSQLQSWTVQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSY---- 160
+++Q+ S T + I+ P + FL P + +S S P+ +
Sbjct: 107 ATTQIPSVTFPSASTKITTLPNVTFL-PQNATTISSRENVNTSSSVATLAPVNSPAPQDT 165
Query: 161 -----TKIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPST- 214
T A P S PE T+ T + PS SS+ P A P+ P+T
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPET--TAAPPTPSATTQAPPS-SSAPPETTAAPPTPPATT 222
Query: 215 PAPPSAKLA-EDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPSLTFASPASPVCASDST 272
PAPPS+ E +A PS + P ++ V PS T P+S ++T
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETT 281
Score = 37.0 bits (84), Expect = 0.031
Identities = 43/178 (24%), Positives = 61/178 (34%), Gaps = 28/178 (15%)
Query: 120 VISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEK 179
V S PQ PP PS +P P S T AP S P
Sbjct: 157 VNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPS-----SSAP--- 208
Query: 180 GTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGS 239
P +++ PT P+ PS+ APP A + P+ ++ +
Sbjct: 209 ---------------PETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSA 253
Query: 240 P--QTLQPVSSSHVAKAPSLTFASP---ASPVCASDSTLHGLESNSPLSPLSANYSSP 292
P T P + S PS A P A+P S +T S +P +A ++P
Sbjct: 254 PPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTP 311
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 42.0 bits (97), Expect = 0.001
Identities = 55/217 (25%), Positives = 84/217 (38%), Gaps = 21/217 (9%)
Query: 44 FSDGSSECLSSAEQMESEDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQG 103
F ++ +SS E + + ++ L + + P TA P+ + + +
Sbjct: 131 FLPQNATTISSRENVNTSSSVATL--APVNSPAPQDTTAAPPTPSATTPAPPSSSAPPET 188
Query: 104 SSSSQLQSWTVQ--PSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYT 161
+++ S T Q PS S+ P PP P +P P S T
Sbjct: 189 TAAPPTPSATTQAPPS----SSAPPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSAT 244
Query: 162 KIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPS--TPAPPS 219
AP S PE T+ V L PS S+S P + A P +PS TPAPPS
Sbjct: 245 TPAPLSS----SAPPE---TTAVPPTPSATTLDPS-SASAPPETTAAPPTPSATTPAPPS 296
Query: 220 AKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPS 256
+ +++ P SP TL P +S + AP+
Sbjct: 297 SPAPQETT--AAPITTPNSSPTTLAP-DTSETSAAPT 330
Score = 37.4 bits (85), Expect = 0.024
Identities = 45/179 (25%), Positives = 69/179 (38%), Gaps = 15/179 (8%)
Query: 105 SSSQLQSWTVQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSY---- 160
+++Q+ S T + I+ P + FL P + +S S P+ +
Sbjct: 107 ATTQIPSVTFPSASTKITTLPNVTFL-PQNATTISSRENVNTSSSVATLAPVNSPAPQDT 165
Query: 161 -----TKIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPST- 214
T A P S PE T+ T + PS SS+ P A P+ P+T
Sbjct: 166 TAAPPTPSATTPAPPSSSAPPET--TAAPPTPSATTQAPPS-SSAPPETTAAPPTPPATT 222
Query: 215 PAPPSAKLA-EDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPSLTFASPASPVCASDST 272
PAPPS+ E +A PS + P ++ V PS T P+S ++T
Sbjct: 223 PAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETT 281
Score = 37.0 bits (84), Expect = 0.031
Identities = 43/178 (24%), Positives = 61/178 (34%), Gaps = 28/178 (15%)
Query: 120 VISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEK 179
V S PQ PP PS +P P S T AP S P
Sbjct: 157 VNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPS-----SSAP--- 208
Query: 180 GTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGS 239
P +++ PT P+ PS+ APP A + P+ ++ +
Sbjct: 209 ---------------PETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSA 253
Query: 240 P--QTLQPVSSSHVAKAPSLTFASP---ASPVCASDSTLHGLESNSPLSPLSANYSSP 292
P T P + S PS A P A+P S +T S +P +A ++P
Sbjct: 254 PPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPAPPSSPAPQETTAAPITTP 311
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 41.6 bits (96), Expect = 0.001
Identities = 63/332 (18%), Positives = 118/332 (35%), Gaps = 45/332 (13%)
Query: 4 KNPSRESPRRLSAKVGKGT-EMKKVARQLGMAAAESDKDSGFSDGSSECLSSAEQMESED 62
K+ ++ SP+ + K K E +++ + + +E+ + S S SS + + S++
Sbjct: 89 KSTTKRSPKPPNKKKTKKVIESEEITEE--HSVSENQESSSSSSSSSSSSTIRKIKSSKN 146
Query: 63 MLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVIS 122
+ ++ + + N K PT P VV + T +S
Sbjct: 147 SAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVS 206
Query: 123 AQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEE---- 178
P++ P P P P ++ K S TK K+ + G E+
Sbjct: 207 TSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSA 266
Query: 179 KGTSGVQK------------------KICTERLGPSLSSSE------------------- 201
K T ++K K T GP+L++ +
Sbjct: 267 KETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPT 326
Query: 202 PTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQT-LQPVSSSHVAKAPSLTFA 260
PT + P++P PAP + K A + + P+ +P T +P ++ AP+ T +
Sbjct: 327 PTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKS 386
Query: 261 SPASPVCASDSTLHGLESNSPLSPLSANYSSP 292
+P +P + +T +P P P
Sbjct: 387 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 418
Score = 34.7 bits (78), Expect = 0.16
Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 7/168 (4%)
Query: 132 PPVPSPVS---PCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKI 188
P P+P + P T K + + P + K AP K P+E + ++
Sbjct: 368 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 427
Query: 189 CTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSA----LQGVPSLVAGGSPQTLQ 244
T + + EP +P+TP P+ ++ A + P+ +P T +
Sbjct: 428 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 487
Query: 245 PVSSSHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSSP 292
++ AP+ T ++P +P S +T +P P P
Sbjct: 488 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 535
Score = 32.0 bits (71), Expect = 1.0
Identities = 32/164 (19%), Positives = 63/164 (38%), Gaps = 4/164 (2%)
Query: 132 PPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKICTE 191
P +P P T K+ P + + AP K+ P+E + ++ T
Sbjct: 410 PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 469
Query: 192 RLGPSLSSSE---PTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSS 248
PS ++ + PT + P++ PAP + K A + + P+ +P T + +
Sbjct: 470 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 529
Query: 249 SHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSSP 292
+ K P+ T +P + + +P +P ++P
Sbjct: 530 T-TPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTP 572
Score = 31.6 bits (70), Expect = 1.3
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 24/177 (13%)
Query: 132 PPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKICTE 191
P P+P +P T + + P + K+AP ++ PEE + ++ T
Sbjct: 564 PKEPAPTTPKETAP--TTPKKLTP--TTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTT 619
Query: 192 RLGPSLSSSEPTKAGAVPSSPSTPAPPSAK---------LAEDSALQGVPSLVAGGSPQT 242
P+ + T A P++P PAP + K A + + P+ G +P T
Sbjct: 620 PEEPAPT----TPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTT 675
Query: 243 L-QPVSSSHVAKAPS----LTFASPASPVC--ASDSTLHGLESNSPLSPLSANYSSP 292
L +P ++ AP T P S C + +T G +P P P
Sbjct: 676 LKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEP 732
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 41.6 bits (96), Expect = 0.001
Identities = 63/332 (18%), Positives = 118/332 (35%), Gaps = 45/332 (13%)
Query: 4 KNPSRESPRRLSAKVGKGT-EMKKVARQLGMAAAESDKDSGFSDGSSECLSSAEQMESED 62
K+ ++ SP+ + K K E +++ + + +E+ + S S SS + + S++
Sbjct: 130 KSTTKRSPKPPNKKKTKKVIESEEITEE--HSVSENQESSSSSSSSSSSSTIRKIKSSKN 187
Query: 63 MLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVIS 122
+ ++ + + N K PT P VV + T +S
Sbjct: 188 SAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVS 247
Query: 123 AQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEE---- 178
P++ P P P P ++ K S TK K+ + G E+
Sbjct: 248 TSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSA 307
Query: 179 KGTSGVQK------------------KICTERLGPSLSSSE------------------- 201
K T ++K K T GP+L++ +
Sbjct: 308 KETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPT 367
Query: 202 PTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQT-LQPVSSSHVAKAPSLTFA 260
PT + P++P PAP + K A + + P+ +P T +P ++ AP+ T +
Sbjct: 368 PTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKS 427
Query: 261 SPASPVCASDSTLHGLESNSPLSPLSANYSSP 292
+P +P + +T +P P P
Sbjct: 428 APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEP 459
Score = 34.7 bits (78), Expect = 0.16
Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 7/168 (4%)
Query: 132 PPVPSPVS---PCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKI 188
P P+P + P T K + + P + K AP K P+E + ++
Sbjct: 409 PKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPA 468
Query: 189 CTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSA----LQGVPSLVAGGSPQTLQ 244
T + + EP +P+TP P+ ++ A + P+ +P T +
Sbjct: 469 PTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTK 528
Query: 245 PVSSSHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSSP 292
++ AP+ T ++P +P S +T +P P P
Sbjct: 529 SAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKP 576
Score = 32.0 bits (71), Expect = 1.0
Identities = 32/164 (19%), Positives = 63/164 (38%), Gaps = 4/164 (2%)
Query: 132 PPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKICTE 191
P +P P T K+ P + + AP K+ P+E + ++ T
Sbjct: 451 PAPTTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTT 510
Query: 192 RLGPSLSSSE---PTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSS 248
PS ++ + PT + P++ PAP + K A + + P+ +P T + +
Sbjct: 511 TKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAP 570
Query: 249 SHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSSP 292
+ K P+ T +P + + +P +P ++P
Sbjct: 571 T-TPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTP 613
Score = 31.6 bits (70), Expect = 1.3
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 24/177 (13%)
Query: 132 PPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKICTE 191
P P+P +P T + + P + K+AP ++ PEE + ++ T
Sbjct: 605 PKEPAPTTPKETAP--TTPKKLTP--TTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTT 660
Query: 192 RLGPSLSSSEPTKAGAVPSSPSTPAPPSAK---------LAEDSALQGVPSLVAGGSPQT 242
P+ + T A P++P PAP + K A + + P+ G +P T
Sbjct: 661 PEEPAPT----TPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTT 716
Query: 243 L-QPVSSSHVAKAPS----LTFASPASPVC--ASDSTLHGLESNSPLSPLSANYSSP 292
L +P ++ AP T P S C + +T G +P P P
Sbjct: 717 LKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEP 773
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 190 TERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSSS 249
T +L P + + T SS S P SA L ++ VP+ + P TL PV +S
Sbjct: 1722 TSKLPPRFAKKQATGIQQAQSSASVPPLASAPLPPSTSAS-VPASTSAPLPATLTPVPAS 1780
Query: 250 HVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYS 290
A P+ T A PV AS S SPL+P+SA+ S
Sbjct: 1781 TSAPVPASTLA----PVLASTS---APVPASPLAPVSASAS 1814
Score = 36.6 bits (83), Expect = 0.041
Identities = 57/211 (27%), Positives = 85/211 (40%), Gaps = 22/211 (10%)
Query: 96 KNVLVKQGSSSSQL-------QSWTVQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKS 148
KN K S +S+L Q+ +Q + S P PP S P T
Sbjct: 1712 KNANEKGRSQTSKLPPRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASVPASTSAPLP 1771
Query: 149 DSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGV--QKKICTERLGPSLSSSEP--TK 204
+ +P S AP P +L P TS + S+S+S P T
Sbjct: 1772 ATLTPVPASTS----APVPAS---TLAPVLASTSAPVPASPLAPVSASASVSASVPASTS 1824
Query: 205 AGAVPSS--PSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPSLTFASP 262
A A+ SS P++ P+ LA S V +++A S L +S A P+ +SP
Sbjct: 1825 AAAITSSSAPASAPAPTPILASVSTPASV-TILASASIPILASALASTSAPTPAPAASSP 1883
Query: 263 ASPVCASDSTLHGLESNS-PLSPLSANYSSP 292
A+PV + + + S PL+P SA+ +P
Sbjct: 1884 AAPVITAPTIPASAPTASVPLAPASASAPAP 1914
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 40.8 bits (94), Expect = 0.002
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 26/223 (11%)
Query: 75 PRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVISAQPQLLFLHPPV 134
P Q+ ++A +LSP+ + ++ L + S SS + P+ P+
Sbjct: 675 PLQSPESAPEGEDSLSPLQIPQSPLEGEDSLSS----------LHFPQSPPEWEDSLSPL 724
Query: 135 PSPVSPCHTGEKKSDSRNYLPILNSYTKIA-PHPGKRGLSLGPEEKGTSGVQKKICT--- 190
P P + +S ++ + I +S T ++ P PE S +Q+ + +
Sbjct: 725 HFPQFPPQGEDFQSSLQSPVSICSSSTSLSLPQSFPESPQSPPEGPAQSPLQRPVSSFFS 784
Query: 191 ERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSSSH 250
L L SS SP +P A+ S + PS + Q+ PVSS
Sbjct: 785 YTLASLLQSSH--------ESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQS-SPVSSFP 835
Query: 251 VAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSSPL 293
+ + SL+ +SP SP+ S + S++ LSP S SSP+
Sbjct: 836 SSTSSSLSKSSPESPL---QSPVISFSSSTSLSPFSEESSSPV 875
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 40.4 bits (93), Expect = 0.003
Identities = 48/170 (28%), Positives = 68/170 (40%), Gaps = 31/170 (18%)
Query: 114 VQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPH------- 166
V P F ++S L+ LH PV SP P + S +Y + Y+ ++PH
Sbjct: 38 VSPHFPLVSPHHPLVSLHHPV-SPHFPLVSPHHPLMSPHYSLVSPQYSPVSPHCPLVSPH 96
Query: 167 ------------PGKRGLSLGPEE-----KGTSGVQKKICTERLG-PSLSSSEPTKAGAV 208
P G+ P + G + + + PSL S P+ V
Sbjct: 97 YSLVSPHRPLVSPLLSGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSLLSDVPSLLSGV 156
Query: 209 PSSPS-TPAPPSAKLAEDSALQGVPSLVAG-GSPQTLQPVSSSHVAKAPS 256
PS PS P+PPS + S VPSL++G SP + P S V PS
Sbjct: 157 PSPPSDVPSPPSDVPSPPS---DVPSLLSGVPSPPSDVPSPPSDVPSPPS 203
Score = 34.7 bits (78), Expect = 0.16
Identities = 55/178 (30%), Positives = 69/178 (38%), Gaps = 30/178 (16%)
Query: 132 PP--VPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKIC 189
PP VPSP S + +P+L+ P P SL + SGV
Sbjct: 194 PPSDVPSPPSDVPLLSDVPSPPSDVPLLSD----VPSPPSDVPSLPSDVPSLSGV----- 244
Query: 190 TERLGPSLSSSEPTKAGAVPSSPSTPAPPS--AKLAED--SALQGVPSLVAG-GSPQTLQ 244
PS S P+ VPS PS +PPS L D S VPSL++G SP +
Sbjct: 245 -----PSPPSDVPSLLSGVPSPPSDISPPSDVPSLLSDVPSLPSDVPSLLSGVPSPPSDV 299
Query: 245 PVSSSHVAKAPSLTFASPAS-------PVCASDSTLHGLESNSPLS--PLSANYSSPL 293
P S V PS + P+ P SD + SP S PL + SPL
Sbjct: 300 PSLLSDVPSPPSDVPSPPSDIPLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSGVPSPL 357
Score = 31.6 bits (70), Expect = 1.3
Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 10/55 (18%)
Query: 195 PSLSSSEPTKAGAVPSSPS-TPAPPSAKLAEDSALQGVPSLVAG-----GSPQTL 243
PSL S P+ VPSSPS P+ PS L GVPSL +G G P TL
Sbjct: 399 PSLLSDVPSLLSGVPSSPSGVPSLPSGV----PILSGVPSLPSGVPSPSGVPITL 449
Score = 30.4 bits (67), Expect = 2.9
Identities = 40/98 (40%), Positives = 46/98 (46%), Gaps = 12/98 (12%)
Query: 195 PSLSSSEPTKAGAVPSSPS-TPAPPS-AKLAED--SALQGVPSLVAGGSPQTLQPVSSSH 250
PSL S P+ VPS PS P+PPS L D S VP L SP + P S
Sbjct: 178 PSLLSGVPSPPSDVPSPPSDVPSPPSDVPLLSDVPSPPSDVPLLSDVPSPPSDVPSLPSD 237
Query: 251 VAKAPSLT-FASPASPVCASDSTLHGLES-NSPLSPLS 286
V PSL+ SP S V S L G+ S S +SP S
Sbjct: 238 V---PSLSGVPSPPSDV---PSLLSGVPSPPSDISPPS 269
>gi|22547121 tumor necrosis factor receptor superfamily, member 10c
precursor [Homo sapiens]
Length = 259
Score = 40.0 bits (92), Expect = 0.004
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 189 CTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSS 248
C E G + + P + +SP TPAP A + + P A + +T+
Sbjct: 149 CVEEFGANATVETPAAEETMNTSPGTPAP-----AAEETMNTSPGTPAPAAEETMTTSPG 203
Query: 249 SHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYSS 291
+ A SP +P A++ T+ + SP +P S++Y S
Sbjct: 204 TPAPAAEETMTTSPGTPAPAAEETM----TTSPGTPASSHYLS 242
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 40.0 bits (92), Expect = 0.004
Identities = 77/345 (22%), Positives = 118/345 (34%), Gaps = 36/345 (10%)
Query: 49 SECLSSAEQMESEDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSSSQ 108
S SS+ + E ED++ A R N T A P ++P M + SS
Sbjct: 992 STARSSSSESEDEDVIPATQCLTPGI-RTNVVTMPTAHPRIAPKASMAGASSSKESSRIS 1050
Query: 109 LQSWTVQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRN-YLPILNSYTKIAPHP 167
P+ +V SA L P SP S + + R LP + TK AP
Sbjct: 1051 DGKKQEGPATQVDSAVGTL-----PATSPQSTSVQAKGTNKLRKPKLPEVQQATK-APES 1104
Query: 168 G-----KRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSA-K 221
S G EE G GP + S T G PS T +A +
Sbjct: 1105 SDDSEDSSDSSSGSEEDGE------------GPQGAKSAHTLVGPTPSRTETLVEETAAE 1152
Query: 222 LAEDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPSLTFASPASPVCASDSTLHGLESNSP 281
+ED + SL++G L P +S P L + S A+ G + P
Sbjct: 1153 SSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKP 1212
Query: 282 ------LSPLSANYSSPLWAAEHLCRSPDIFSEQRQSKHRRFQNTLVVLHKSGLLEITLK 335
LSP + + R P + Q+ Q+ + LL
Sbjct: 1213 QQAAGMLSPKTGGKEAASGTTPQKSRKPKKGAGNPQASTLALQSNIT----QCLLGQPWP 1268
Query: 336 TKELIRQNQATQVELDQLKEQTQLFIEATKSRAPQAWAKLQASLT 380
E Q +V + L+++ + ++ TK + + W + L+
Sbjct: 1269 LNEAQVQASVVKVLTELLEQERKKVVDTTKESSRKGWESRKRKLS 1313
Score = 34.3 bits (77), Expect = 0.20
Identities = 62/254 (24%), Positives = 94/254 (37%), Gaps = 30/254 (11%)
Query: 6 PSRESPRRLSAKVGKGTEMKKVAR-QLGMAAAESDKDSGFSDGSSECLSSAEQMESEDML 64
P++ESPR+ +A G VA+ Q G +S S SD E + A+ +
Sbjct: 377 PAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQV 436
Query: 65 SALGWSREDRPRQNSKTA--KNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVIS 122
A ++ PR+ + A + P + + V K ++ S SS +S + + + ++
Sbjct: 437 RAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQ---EEDSRSSSEESDSDREALAAMN 493
Query: 123 AQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTS 182
A P P S G L P PGK +GP T
Sbjct: 494 AAQVKPLGKSPQVKPASTMGMGP-----------LGKGAGPVP-PGK----VGP---ATP 534
Query: 183 GVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVP-SLVAGGSPQ 241
Q E S S + G VP T P+ + + + LQ P S A G PQ
Sbjct: 535 SAQVGKWEEDSESSSEESSDSSDGEVP----TAVAPAQEKSLGNILQAKPTSSPAKGPPQ 590
Query: 242 TLQPVSSSHVAKAP 255
PV+ A+ P
Sbjct: 591 KAGPVAVQVKAEKP 604
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 40.0 bits (92), Expect = 0.004
Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 41/185 (22%)
Query: 132 PPVPSPVS-PCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGV-----Q 185
PP+P PC++ E KS +P L+ T+ K G L PE + + Q
Sbjct: 109 PPLPEHQKIPCNSAEPKS-----IPALSMETQ------KLGSVLSPESPKPTPLTPLEPQ 157
Query: 186 K--KICTERLGPSLSSSEPTKAGAVPSSPSTPAPP-SAKLAEDSALQGVPS----LVAGG 238
K + + L L S EP+K P+S S+P PP S + E L VPS A
Sbjct: 158 KPGSVVSPELQTPLPSPEPSK----PASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPV 213
Query: 239 SPQTL-------QPVSSSHVAKA---PSLTFASPASPVCASDSTLHG-LESNSPLSPLSA 287
SP+++ +P SH + PS +SP SPV A+ G + SP S SA
Sbjct: 214 SPESVKATLSNPKPQKQSHFPETLGPPSA--SSPESPVLAASPEPWGPSPAASPESRKSA 271
Query: 288 NYSSP 292
+SP
Sbjct: 272 RTTSP 276
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 39.3 bits (90), Expect = 0.006
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 194 GPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAK 253
GP SEP +PS PST PP L E P +A P L+ +S H
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP----PPSMAPPPPPVLEALSPPHTLS 204
Query: 254 APSL----TFASPASPV 266
+PS+ F PA P+
Sbjct: 205 SPSIPTPPDFIPPAPPL 221
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 39.3 bits (90), Expect = 0.006
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 194 GPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAK 253
GP SEP +PS PST PP L E P +A P L+ +S H
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP----PPSMAPPPPPVLEALSPPHTLS 204
Query: 254 APSL----TFASPASPV 266
+PS+ F PA P+
Sbjct: 205 SPSIPTPPDFIPPAPPL 221
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 39.3 bits (90), Expect = 0.006
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 194 GPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAK 253
GP SEP +PS PST PP L E P +A P L+ +S H
Sbjct: 149 GPPQDISEPPGGSPLPSPPSTAPPPPPLLLEPPP----PPSMAPPPPPVLEALSPPHTLS 204
Query: 254 APSL----TFASPASPV 266
+PS+ F PA P+
Sbjct: 205 SPSIPTPPDFIPPAPPL 221
>gi|39995080 hypothetical protein LOC79567 [Homo sapiens]
Length = 1219
Score = 39.3 bits (90), Expect = 0.006
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 17/163 (10%)
Query: 135 PSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKICTERL- 193
PSP++ TG + PI+++ T P +GP + TS
Sbjct: 563 PSPLTHTTTGS------THKPIISTLTTTGPTLN----IIGPVQTTTSPTHTMPSPTHTT 612
Query: 194 -GPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQT--LQPVSSS- 249
P+ +S+ PT P+ ++ +PP+ S + V + + P T P +S
Sbjct: 613 ASPTHTSTSPTHTPTSPTHKTSMSPPTTTSPTPSGMGLVQTATSPTHPTTSPTHPTTSPI 672
Query: 250 --HVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSANYS 290
+V+ + SL A+ +SP SD TL G +S P+S +Y+
Sbjct: 673 LINVSPSTSLELATLSSPSKHSDPTLPGTDSLPCSPPVSNSYT 715
Score = 30.0 bits (66), Expect = 3.8
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 10/86 (11%)
Query: 155 PILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPS-SPS 213
P+ NSYT+ P + P +K + + P+ SE T P+ SP
Sbjct: 709 PVSNSYTQADPMAPRT-----PHPSPAHSSRKPLTS----PAPDPSESTVQSLSPTPSPP 759
Query: 214 TPAPPSAKLAEDSALQGVPSLVAGGS 239
TPAP + L A+Q AGGS
Sbjct: 760 TPAPQHSDLCLAMAVQTPVPTAAGGS 785
>gi|167466190 forkhead box P3 isoform b [Homo sapiens]
Length = 396
Score = 38.9 bits (89), Expect = 0.008
Identities = 52/177 (29%), Positives = 74/177 (41%), Gaps = 28/177 (15%)
Query: 216 APPSAKLAEDSALQGVPSLVAG-GSPQTLQPVSSSHVAKAPSL--TFASPASPVCASDST 272
+P L + GV SL A G P + S V++ P+L TF +P++P DST
Sbjct: 90 SPAMISLTPPTTATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAP--RKDST 147
Query: 273 LHGLESNSPLSPLSANYSSPLWAAEHLCRSPDIFSEQRQSKHRRFQNTLVVLHKSGLLEI 332
L + +S PL AN E + P+ F + Q+ H +L + G +
Sbjct: 148 LSAVPQSS--YPLLANGVCKWPGCEKVFEEPEDFLKHCQADH--------LLDEKGRAQC 197
Query: 333 TLKTKELIRQNQATQVELDQLKEQTQLFIEATKSRAPQAWAKLQASLTPGSSNTGSD 389
L Q E+ Q EQ QL +E K A QA + +LT SS SD
Sbjct: 198 LL------------QREMVQSLEQ-QLVLEKEKLSAMQAHLAGKMALTKASSVASSD 241
>gi|31982943 forkhead box P3 isoform a [Homo sapiens]
Length = 431
Score = 38.9 bits (89), Expect = 0.008
Identities = 52/177 (29%), Positives = 74/177 (41%), Gaps = 28/177 (15%)
Query: 216 APPSAKLAEDSALQGVPSLVAG-GSPQTLQPVSSSHVAKAPSL--TFASPASPVCASDST 272
+P L + GV SL A G P + S V++ P+L TF +P++P DST
Sbjct: 125 SPAMISLTPPTTATGVFSLKARPGLPPGINVASLEWVSREPALLCTFPNPSAP--RKDST 182
Query: 273 LHGLESNSPLSPLSANYSSPLWAAEHLCRSPDIFSEQRQSKHRRFQNTLVVLHKSGLLEI 332
L + +S PL AN E + P+ F + Q+ H +L + G +
Sbjct: 183 LSAVPQSS--YPLLANGVCKWPGCEKVFEEPEDFLKHCQADH--------LLDEKGRAQC 232
Query: 333 TLKTKELIRQNQATQVELDQLKEQTQLFIEATKSRAPQAWAKLQASLTPGSSNTGSD 389
L Q E+ Q EQ QL +E K A QA + +LT SS SD
Sbjct: 233 LL------------QREMVQSLEQ-QLVLEKEKLSAMQAHLAGKMALTKASSVASSD 276
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 38.5 bits (88), Expect = 0.011
Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 14/148 (9%)
Query: 131 HPPVPSP-----VSPCHTGEKKSDSRNYLPILNSYTKIAPHP-GKRGLSLGPEEKGTSGV 184
HP P P + P + D+ L L+S P P G + + P + + +
Sbjct: 268 HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPL 327
Query: 185 QKKICTERLGPSLSSS---EPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQ 241
T P L++ P A PS + P+PP+ ++ P + A S Q
Sbjct: 328 P---ATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQ 384
Query: 242 TLQPVSSSHVAKAPSLTFASPASPVCAS 269
T+ P+ H +PSL +P SP+ S
Sbjct: 385 TIPPIQVPHSLTSPSL--QAPPSPLALS 410
Score = 37.7 bits (86), Expect = 0.018
Identities = 84/341 (24%), Positives = 116/341 (34%), Gaps = 75/341 (21%)
Query: 3 RKNPSRESPRRL--SAKVGKGTEMKKVARQLGMAAAESDKDSGFSDGSSECLSSAEQMES 60
R P E PR+ SA TE AR+ A + + S SS S+
Sbjct: 197 RPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG 256
Query: 61 EDMLSALGWSRED--------------RPRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSS 106
SA G R RP Q + K+A P L P+ + L S
Sbjct: 257 P---SARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPL--SSSPLATPSPSG 311
Query: 107 SQLQSWTVQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPH 166
++ + V P + P L PP+ +P+ S LP
Sbjct: 312 TKARP--VPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLP----------S 359
Query: 167 PGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPS----AKL 222
P S P T +Q PSL + P + +SPS APPS + L
Sbjct: 360 PPATPPSQAPPSMTTPPMQAP-------PSLQTIPPIQVPHSLTSPSLQAPPSPLALSSL 412
Query: 223 AEDSALQGVPSLVAGGSPQTLQPVSS------------------------SHVAKAPSLT 258
++L G P+L A S T+ P + S A P T
Sbjct: 413 QATTSL-GSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQT 471
Query: 259 FASPASPVCASDSTLHGLE------SNSPLSPLSANYSSPL 293
SPA +S T+H L+ S+SP +PLS+ PL
Sbjct: 472 SLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPL 512
Score = 31.2 bits (69), Expect = 1.7
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 189 CTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSS 248
C + PS ++ P + PSS +TP P + LQG+PS SP P +
Sbjct: 567 CPLQAPPSPLTTPPPET---PSSIATPPPQAPPALASPPLQGLPSPPL--SPLATPPPQA 621
Query: 249 SHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPLSA-NYSSPLWAAEHLCRSP 303
P L +P SP ++ PLSPL+ + +P A HL ++P
Sbjct: 622 PPXLALPPL--QAPPSP-----------PASPPLSPLATPSPQAPNALAVHLLQAP 664
>gi|224177469 SET domain, bifurcated 1 isoform 2 [Homo sapiens]
Length = 1290
Score = 38.5 bits (88), Expect = 0.011
Identities = 45/168 (26%), Positives = 63/168 (37%), Gaps = 45/168 (26%)
Query: 194 GPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQG----------------------- 230
G EP + A P+ P PAPP + A DS L+
Sbjct: 442 GTQFKPVEPPQPTAPPAPPFPPAPPLSPQAGDSDLESQLAQSRKQVAKKSTSFRPGSVGS 501
Query: 231 ------VPSL---VAGGSPQTLQ----PVSSSHVAKAPSLTFASPASPVCASDSTLHGLE 277
P+L V+GG P Q P+ S+ A APS A PA PV HG+
Sbjct: 502 GHSSPTSPALSENVSGGKPGINQTYRSPLGSTASAPAPSALPAPPAPPV------FHGML 555
Query: 278 SNSPLSPLSANYSSPLWAAEHLCRSPDIFSEQRQSKHRRF--QNTLVV 323
+P P L+ H+C S S R ++ ++ +N L+V
Sbjct: 556 ERAPAEPSYRAPMEKLFYLPHVC-SYTCLSRVRPMRNEQYRGKNPLLV 602
>gi|224177467 SET domain, bifurcated 1 isoform 1 [Homo sapiens]
Length = 1291
Score = 38.5 bits (88), Expect = 0.011
Identities = 45/168 (26%), Positives = 63/168 (37%), Gaps = 45/168 (26%)
Query: 194 GPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQG----------------------- 230
G EP + A P+ P PAPP + A DS L+
Sbjct: 442 GTQFKPVEPPQPTAPPAPPFPPAPPLSPQAGDSDLESQLAQSRKQVAKKSTSFRPGSVGS 501
Query: 231 ------VPSL---VAGGSPQTLQ----PVSSSHVAKAPSLTFASPASPVCASDSTLHGLE 277
P+L V+GG P Q P+ S+ A APS A PA PV HG+
Sbjct: 502 GHSSPTSPALSENVSGGKPGINQTYRSPLGSTASAPAPSALPAPPAPPV------FHGML 555
Query: 278 SNSPLSPLSANYSSPLWAAEHLCRSPDIFSEQRQSKHRRF--QNTLVV 323
+P P L+ H+C S S R ++ ++ +N L+V
Sbjct: 556 ERAPAEPSYRAPMEKLFYLPHVC-SYTCLSRVRPMRNEQYRGKNPLLV 602
>gi|4758532 ral guanine nucleotide dissociation stimulator-like 2
[Homo sapiens]
Length = 777
Score = 38.5 bits (88), Expect = 0.011
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 17/102 (16%)
Query: 195 PSLSSSEPTKAGAVPSSPSTPAPPSAKLAE----------DSALQGVPSLVAGGSPQTLQ 244
P +S P+ G +P+TPAP +LA+ DSAL+ PSL + P L
Sbjct: 545 PLVSCDRPSTGG--DEAPTTPAPLLTRLAQHMKWPSVSSLDSALESSPSLHSPADPSHLS 602
Query: 245 PVSSSHVAKAPSLTFASPASPVC-----ASDSTLHGLESNSP 281
P +SS AS SP+ AS T +G E + P
Sbjct: 603 PPASSPRPSRGHRRSASCGSPLSGGAEEASGGTGYGGEGSGP 644
>gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens]
Length = 829
Score = 38.1 bits (87), Expect = 0.014
Identities = 35/132 (26%), Positives = 56/132 (42%), Gaps = 11/132 (8%)
Query: 170 RGLSLGPEEKGTSGVQKKICTERLGP----SLSSSEPTKAGAVPSSPSTPAPPSAKLAED 225
+G S G + T+ QK+ C++ P + S E +A SSP P P ++K
Sbjct: 460 KGPSYGEDVSNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQPRPSTSKAVSP 519
Query: 226 SALQGVPSLVAGGSPQTLQPVSSSHVAKAPS-----LTFASPASPVCASDSTLHGLESNS 280
L G PS + + +S+HVA + S + A +S + +E+
Sbjct: 520 PHLDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSCMEPMETAE 579
Query: 281 PLSPLSANYSSP 292
P S S +SSP
Sbjct: 580 PQS--SPAHSSP 589
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 38.1 bits (87), Expect = 0.014
Identities = 52/189 (27%), Positives = 70/189 (37%), Gaps = 39/189 (20%)
Query: 81 TAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVISAQPQLLFLHPPVPSPVSP 140
T + PT P + G S T+ S S+QP L F + P+ P
Sbjct: 482 TFSQSLPTAVPTATSSSAADFSGFGS------TLATSAPATSSQPTLTFSNTSTPTFNIP 535
Query: 141 CHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSS 200
+ K L SY P P + G E G K T PS SS
Sbjct: 536 FGSSAKSP--------LPSYPGANPQP-----AFGAAEGQPPGAAKPALT----PSFGSS 578
Query: 201 EPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPV--SSSHVA---KAP 255
A P++ TPAPP S ++ VP+ V P +QP ++H A KA
Sbjct: 579 FTFGNSAAPAAAPTPAPP-------SMIKIVPAHV----PTPIQPTFGGATHSAFGLKAT 627
Query: 256 SLTFASPAS 264
+ F +PAS
Sbjct: 628 ASAFGAPAS 636
Score = 35.0 bits (79), Expect = 0.12
Identities = 50/175 (28%), Positives = 70/175 (40%), Gaps = 20/175 (11%)
Query: 124 QPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKG--T 181
QP F P +P SP + S + P+L S K+ P L PE G T
Sbjct: 154 QPSFTFTLPAA-APASPPTSLLAPSTN----PLLESLKKMQTPPS---LPPCPESAGAAT 205
Query: 182 SGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQ 241
+ T L P L S+ G +PS PP+ L A VP+ +P
Sbjct: 206 TEALSPPKTPNLLPPLGLSQSGPPGLLPSPSFDSNPPTTLLGLIPAPSMVPA-TDTKAPP 264
Query: 242 TLQPVSSSHVAKAPSLTFASPASPVCASDSTLHGLESNSPLSPL--SANYSSPLW 294
TLQ + P T A +P S L G ++ SP SP +A+ +SP++
Sbjct: 265 TLQ----AETTTKPQATSAPSPAP---KQSFLFGTQNTSPSSPAAPAASSASPMF 312
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 38.1 bits (87), Expect = 0.014
Identities = 85/373 (22%), Positives = 127/373 (34%), Gaps = 61/373 (16%)
Query: 22 TEMKKVARQLGMAAAESDKDSG-FSDGSSECLSSAEQMESEDMLSALGWSREDRPRQNSK 80
T ++A + MA A S K+S SDG + E Q SK
Sbjct: 949 TAHPRIAPKASMAGASSSKESSRISDGKKQ---------------------EGPATQVSK 987
Query: 81 TAKNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVISAQPQLLFLHPPVPSPVSP 140
KN P P+ ++ Q +S +Q QPS V SA L P SP S
Sbjct: 988 --KN--PASLPLTQAALKVLAQKASEAQPPVARTQPSSGVDSAVGTL-----PATSPQST 1038
Query: 141 CHTGEKKSDSRN-YLPILNSYTKIAPHPG-----KRGLSLGPEEKGTSGVQKKICTERLG 194
+ + R LP + TK AP S G EE G G
Sbjct: 1039 SVQAKGTNKLRKPKLPEVQQATK-APESSDDSEDSSDSSSGSEEDGE------------G 1085
Query: 195 PSLSSSEPTKAGAVPSSPSTPAPPSA-KLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAK 253
P + S T G PS T +A + +ED + SL++G L P +S
Sbjct: 1086 PQGAKSAHTLVGPTPSRTETLVEETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKA 1145
Query: 254 APSLTFASPASPVCASDSTLHGLESNSP------LSPLSANYSSPLWAAEHLCRSPDIFS 307
P L + S A+ G + P LSP + + R P +
Sbjct: 1146 TPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEAASGTTPQKSRKPKKGA 1205
Query: 308 EQRQSKHRRFQNTLVVLHKSGLLEITLKTKELIRQNQATQVELDQLKEQTQLFIEATKSR 367
Q+ Q+ + LL E Q +V + L+++ + ++ TK
Sbjct: 1206 GNPQASTLALQSNIT----QCLLGQPWPLNEAQVQASVVKVLTELLEQERKKVVDTTKES 1261
Query: 368 APQAWAKLQASLT 380
+ + W + L+
Sbjct: 1262 SRKGWESRKRKLS 1274
Score = 34.3 bits (77), Expect = 0.20
Identities = 62/254 (24%), Positives = 94/254 (37%), Gaps = 30/254 (11%)
Query: 6 PSRESPRRLSAKVGKGTEMKKVAR-QLGMAAAESDKDSGFSDGSSECLSSAEQMESEDML 64
P++ESPR+ +A G VA+ Q G +S S SD E + A+ +
Sbjct: 300 PAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQV 359
Query: 65 SALGWSREDRPRQNSKTA--KNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVIS 122
A ++ PR+ + A + P + + V K ++ S SS +S + + + ++
Sbjct: 360 RAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQ---EEDSRSSSEESDSDREALAAMN 416
Query: 123 AQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTS 182
A P P S G L P PGK +GP T
Sbjct: 417 AAQVKPLGKSPQVKPASTMGMGP-----------LGKGAGPVP-PGK----VGP---ATP 457
Query: 183 GVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVP-SLVAGGSPQ 241
Q E S S + G VP T P+ + + + LQ P S A G PQ
Sbjct: 458 SAQVGKWEEDSESSSEESSDSSDGEVP----TAVAPAQEKSLGNILQAKPTSSPAKGPPQ 513
Query: 242 TLQPVSSSHVAKAP 255
PV+ A+ P
Sbjct: 514 KAGPVAVQVKAEKP 527
>gi|154090979 hypothetical protein LOC57481 [Homo sapiens]
Length = 1709
Score = 38.1 bits (87), Expect = 0.014
Identities = 61/277 (22%), Positives = 111/277 (40%), Gaps = 32/277 (11%)
Query: 39 DKDSGFSDGSSECLSSA--EQMESEDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMK 96
D S + CLS A E ++E + + + + +++ P P +
Sbjct: 824 DLSSSEEELDLRCLSQALEEPEDAEVFTESSSYVEKYNTSDDCSSSEEDLPLRHPAQALG 883
Query: 97 NVLVKQGSSSSQLQSWTVQPSF--EVISAQPQLLFLHPPVPS--PVSPCHTGEKKSDSRN 152
+Q SS+ + Q F ++ S P ++P V P S T K+SDS
Sbjct: 884 KPKNQQEVSSASNNTPEEQNDFMQQLPSRCPSQPIMNPTVQQQVPTSSVGTSIKQSDSVE 943
Query: 153 YLPILNSYTKIAPHPGKRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSP 212
+P + + ++ +S P+ + V++ I + L P L +P V +
Sbjct: 944 PIPPRHPFQPWVNPKVEQEVSSSPK---SMAVEESISMKPLPPKLLC-QPLMNPKVQQNM 999
Query: 213 STPAPPSAKLAEDSALQGVPS---LVAGGSPQTLQPVSSSHVAKAPSL---TFASPASPV 266
+ + ED A++ V S L+ SPQ+L ++++ ++ T+ P P
Sbjct: 1000 FSGS-------EDIAVERVISVEPLLPRYSPQSLTDPQIRQISESTAVEEGTYVEPLPPR 1052
Query: 267 CAS---------DSTLHGLESNSPLSPLSANYSSPLW 294
C S DS E +SP++P + Y+SP W
Sbjct: 1053 CLSQPSERPKFLDSMSTSAEWSSPVAPTPSKYTSPPW 1089
>gi|15147240 brother of CDO [Homo sapiens]
Length = 1114
Score = 38.1 bits (87), Expect = 0.014
Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 14/125 (11%)
Query: 151 RNYLPILNSYTKIAPHPGKRGLSLGPEEKGT-------------SGVQKKICTERLGPSL 197
RN +P+++S R LS+GPE++G + VQ + + P L
Sbjct: 358 RNAVPLISSQRLRLSRRALRVLSMGPEDEGVYQCMAENEVGSAHAVVQLRTSRPSITPRL 417
Query: 198 SSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPSL 257
G P SPS P L AL P+ V SPQ A+AP +
Sbjct: 418 WQDAELATGTPPVSPSKLGNPEQMLRGQPALPRPPTSVGPASPQCPGEKGQGAPAEAP-I 476
Query: 258 TFASP 262
+SP
Sbjct: 477 ILSSP 481
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a [Homo
sapiens]
Length = 1450
Score = 37.7 bits (86), Expect = 0.018
Identities = 76/344 (22%), Positives = 119/344 (34%), Gaps = 35/344 (10%)
Query: 49 SECLSSAEQMESEDMLSALGWSREDRPRQNSKTAKNAFPTLSPMVVMKNVLVKQGSSSSQ 108
S SS+ + E ED++ A R N T A P ++P M + SS
Sbjct: 992 STARSSSSESEDEDVIPATQCLTPGI-RTNVVTMPTAHPRIAPKASMAGASSSKESSRIS 1050
Query: 109 LQSWTVQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRN-YLPILNSYTKIAPHP 167
P+ +V SA L P SP S + + R LP + TK AP
Sbjct: 1051 DGKKQEGPATQVDSAVGTL-----PATSPQSTSVQAKGTNKLRKPKLPEVQQATK-APES 1104
Query: 168 G-----KRGLSLGPEEKGTSGVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKL 222
S G EE G G Q LGP+ S +E + +A+
Sbjct: 1105 SDDSEDSSDSSSGSEEDG-EGPQGAKSAHTLGPTPSRTE-----------TLVEETAAES 1152
Query: 223 AEDSALQGVPSLVAGGSPQTLQPVSSSHVAKAPSLTFASPASPVCASDSTLHGLESNSP- 281
+ED + SL++G L P +S P L + S A+ G + P
Sbjct: 1153 SEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQ 1212
Query: 282 -----LSPLSANYSSPLWAAEHLCRSPDIFSEQRQSKHRRFQNTLVVLHKSGLLEITLKT 336
LSP + + R P + Q+ Q+ + LL
Sbjct: 1213 QAAGMLSPKTGGKEAASGTTPQKSRKPKKGAGNPQASTLALQSNIT----QCLLGQPWPL 1268
Query: 337 KELIRQNQATQVELDQLKEQTQLFIEATKSRAPQAWAKLQASLT 380
E Q +V + L+++ + ++ TK + + W + L+
Sbjct: 1269 NEAQVQASVVKVLTELLEQERKKVVDTTKESSRKGWESRKRKLS 1312
Score = 34.3 bits (77), Expect = 0.20
Identities = 62/254 (24%), Positives = 94/254 (37%), Gaps = 30/254 (11%)
Query: 6 PSRESPRRLSAKVGKGTEMKKVAR-QLGMAAAESDKDSGFSDGSSECLSSAEQMESEDML 64
P++ESPR+ +A G VA+ Q G +S S SD E + A+ +
Sbjct: 377 PAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQV 436
Query: 65 SALGWSREDRPRQNSKTA--KNAFPTLSPMVVMKNVLVKQGSSSSQLQSWTVQPSFEVIS 122
A ++ PR+ + A + P + + V K ++ S SS +S + + + ++
Sbjct: 437 RAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQ---EEDSRSSSEESDSDREALAAMN 493
Query: 123 AQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYLPILNSYTKIAPHPGKRGLSLGPEEKGTS 182
A P P S G L P PGK +GP T
Sbjct: 494 AAQVKPLGKSPQVKPASTMGMGP-----------LGKGAGPVP-PGK----VGP---ATP 534
Query: 183 GVQKKICTERLGPSLSSSEPTKAGAVPSSPSTPAPPSAKLAEDSALQGVP-SLVAGGSPQ 241
Q E S S + G VP T P+ + + + LQ P S A G PQ
Sbjct: 535 SAQVGKWEEDSESSSEESSDSSDGEVP----TAVAPAQEKSLGNILQAKPTSSPAKGPPQ 590
Query: 242 TLQPVSSSHVAKAP 255
PV+ A+ P
Sbjct: 591 KAGPVAVQVKAEKP 604
>gi|216547801 SH2 domain containing 3C isoform e [Homo sapiens]
Length = 700
Score = 37.7 bits (86), Expect = 0.018
Identities = 46/191 (24%), Positives = 77/191 (40%), Gaps = 24/191 (12%)
Query: 95 MKNVLVKQGSSSSQLQSWTVQPSFEVISAQPQLLFLHPPVPSPVSPCHTGEKKSDSRNYL 154
+ V+VK G S + +Q Q SF+ + P L+ H VS ++S + Y
Sbjct: 107 INKVVVKAGESYTHIQYLFEQESFDHV---PALVRYHVGSRKAVS------EQSGAIIYC 157
Query: 155 PILNSYTKIAPHPGKRGLSLGPEE-------KGTSGVQKKICTERLGPSLSSSEPTKAGA 207
P+ ++ + GL G + G G K + + L++ + T++
Sbjct: 158 PVNRTFP-LRYLEASYGLGQGSSKPASPVSPSGPKGSHMKRRSVTMTDGLTADKVTRSDG 216
Query: 208 VPSSPSTPAPPSAKLAEDSALQGVPSLVAGGSPQTLQP-------VSSSHVAKAPSLTFA 260
P+S S P P + + ++ +P L + SP + P V+ H A A A
Sbjct: 217 CPTSTSLPRPRDSIRSCALSMDQIPDLHSPMSPISESPSSPAYSTVTRVHAAPAAPSATA 276
Query: 261 SPASPVCASDS 271
PASPV S
Sbjct: 277 LPASPVARRSS 287
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.123 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,257,970
Number of Sequences: 37866
Number of extensions: 911408
Number of successful extensions: 5712
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 448
Number of HSP's that attempted gapping in prelim test: 4855
Number of HSP's gapped (non-prelim): 1139
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.