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Search of human proteins with 30581160
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|30581160 ganglioside-induced differentiation-associated
protein 1-like 1 [Homo sapiens]
(367 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|30581160 ganglioside-induced differentiation-associated prote... 750 0.0
gi|108773797 ganglioside-induced differentiation-associated prot... 385 e-107
gi|108773799 ganglioside-induced differentiation-associated prot... 310 2e-84
gi|22035558 transcription initiation factor IIIB isoform 3 [Homo... 37 0.037
gi|22035556 transcription initiation factor IIIB isoform 1 [Homo... 37 0.037
gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7... 33 0.53
gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7... 33 0.53
gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6... 33 0.53
gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5... 33 0.53
gi|24307971 serine/threonine kinase 38 like [Homo sapiens] 32 0.90
gi|226823235 regenerating islet-derived family, member 4 isoform... 31 1.5
gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens] 31 1.5
gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens] 31 1.5
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 31 1.5
gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens] 31 1.5
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 31 1.5
gi|156546890 WW and C2 domain containing 2 [Homo sapiens] 31 1.5
gi|210032790 hypothetical protein LOC27146 [Homo sapiens] 30 2.6
gi|89063265 PREDICTED: similar to MHC class I antigen [Homo sapi... 30 3.4
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 30 3.4
gi|4504417 major histocompatibility complex, class I-related [Ho... 29 5.8
gi|54873602 hypothetical protein LOC220382 [Homo sapiens] 29 5.8
gi|209863011 periostin, osteoblast specific factor isoform 3 [Ho... 29 7.6
gi|209862907 periostin, osteoblast specific factor isoform 1 [Ho... 29 7.6
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l... 29 7.6
gi|20162564 tripartite motif-containing 40 [Homo sapiens] 29 7.6
gi|149158725 N-terminal EF-hand calcium binding protein 3 isofor... 28 10.0
gi|149158723 N-terminal EF-hand calcium binding protein 3 isofor... 28 10.0
gi|38570149 WWC family member 3 [Homo sapiens] 28 10.0
>gi|30581160 ganglioside-induced differentiation-associated protein
1-like 1 [Homo sapiens]
Length = 367
Score = 750 bits (1936), Expect = 0.0
Identities = 367/367 (100%), Positives = 367/367 (100%)
Query: 1 MATPNNLTPTNCSWWPISALESDAAKPAEAPDAPEAASPAHWPRESLVLYHWTQSFSSQK 60
MATPNNLTPTNCSWWPISALESDAAKPAEAPDAPEAASPAHWPRESLVLYHWTQSFSSQK
Sbjct: 1 MATPNNLTPTNCSWWPISALESDAAKPAEAPDAPEAASPAHWPRESLVLYHWTQSFSSQK 60
Query: 61 VRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYVER 120
VRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYVER
Sbjct: 61 VRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYVER 120
Query: 121 TFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAE 180
TFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAE
Sbjct: 121 TFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAE 180
Query: 181 IRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQ 240
IRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQ
Sbjct: 181 IRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQ 240
Query: 241 IEAELEKRKLENEGQKCELWLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQS 300
IEAELEKRKLENEGQKCELWLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQS
Sbjct: 241 IEAELEKRKLENEGQKCELWLCGCAFTLADVLLGATLHRLKFLGLSKKYWEDGSRPNLQS 300
Query: 301 FFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSFFGASFLMGSLGGMGYFAYW 360
FFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSFFGASFLMGSLGGMGYFAYW
Sbjct: 301 FFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSFFGASFLMGSLGGMGYFAYW 360
Query: 361 YLKKKYI 367
YLKKKYI
Sbjct: 361 YLKKKYI 367
>gi|108773797 ganglioside-induced differentiation-associated protein
1 isoform a [Homo sapiens]
Length = 358
Score = 385 bits (988), Expect = e-107
Identities = 187/319 (58%), Positives = 236/319 (73%), Gaps = 1/319 (0%)
Query: 47 LVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRDN 106
L+LYHWT SFSSQKVRLVIAEK L CEE DVSLP SEH EPWFMRLN EVPV+IH +N
Sbjct: 26 LILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGEN 85
Query: 107 IISDYDQIIDYVERTFTGEHVVALMPEVGSLQHARVLQYRELLDALPMDAYTHGCILHPE 166
II + QIIDY+E+TF E LMP+ S+ + RV YRELLD+LPMDAYTHGCILHPE
Sbjct: 86 IICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELLDSLPMDAYTHGCILHPE 145
Query: 167 LTTDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSY 226
LT DSMIP YAT IR + N ++L KL EE P L E Y++KQK+L +K+L+HD+V Y
Sbjct: 146 LTVDSMIPAYATTRIRSQIGNTESELKKL-AEENPDLQEAYIAKQKRLKSKLLDHDNVKY 204
Query: 227 LKKILGELAMVLDQIEAELEKRKLENEGQKCELWLCGCAFTLADVLLGATLHRLKFLGLS 286
LKKIL EL VLDQ+E EL++R E + + WLCG +FTLADV L TLHRLKFLG +
Sbjct: 205 LKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFA 264
Query: 287 KKYWEDGSRPNLQSFFERVQRRFAFRKVLGDIHTTLLSAVIPNAFRLVKRKPPSFFGASF 346
++ W +G RPNL++++ERV +R F KVLG ++ L+SAV+P AFR+ K++ P G +
Sbjct: 265 RRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKVLGTTL 324
Query: 347 LMGSLGGMGYFAYWYLKKK 365
++G L G+GYFA+ +K+
Sbjct: 325 VVGLLAGVGYFAFMLFRKR 343
>gi|108773799 ganglioside-induced differentiation-associated protein
1 isoform b [Homo sapiens]
Length = 290
Score = 310 bits (793), Expect = 2e-84
Identities = 151/276 (54%), Positives = 199/276 (72%), Gaps = 1/276 (0%)
Query: 90 MRLNLGEEVPVIIHRDNIISDYDQIIDYVERTFTGEHVVALMPEVGSLQHARVLQYRELL 149
MRLN EVPV+IH +NII + QIIDY+E+TF E LMP+ S+ + RV YRELL
Sbjct: 1 MRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDKESMYYPRVQHYRELL 60
Query: 150 DALPMDAYTHGCILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLS 209
D+LPMDAYTHGCILHPELT DSMIP YAT IR + N ++L KL EE P L E Y++
Sbjct: 61 DSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLA-EENPDLQEAYIA 119
Query: 210 KQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWLCGCAFTLA 269
KQK+L +K+L+HD+V YLKKIL EL VLDQ+E EL++R E + + WLCG +FTLA
Sbjct: 120 KQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLA 179
Query: 270 DVLLGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDIHTTLLSAVIPN 329
DV L TLHRLKFLG +++ W +G RPNL++++ERV +R F KVLG ++ L+SAV+P
Sbjct: 180 DVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLGHVNNILISAVLPT 239
Query: 330 AFRLVKRKPPSFFGASFLMGSLGGMGYFAYWYLKKK 365
AFR+ K++ P G + ++G L G+GYFA+ +K+
Sbjct: 240 AFRVAKKRAPKVLGTTLVVGLLAGVGYFAFMLFRKR 275
>gi|22035558 transcription initiation factor IIIB isoform 3 [Homo
sapiens]
Length = 473
Score = 36.6 bits (83), Expect = 0.037
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 191 DLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKL 250
+ MK+D EEE Y + Q+KL K LE L+++ GE++ D IE ELE +
Sbjct: 75 EFMKIDLEEECD-PPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISSYQDAIEIELENSRP 133
Query: 251 ENEGQKCELWLCGCAFTLADVLLG 274
+ +G L G A L G
Sbjct: 134 KAKGGLASLAKDGSTEDTASSLCG 157
>gi|22035556 transcription initiation factor IIIB isoform 1 [Homo
sapiens]
Length = 677
Score = 36.6 bits (83), Expect = 0.037
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 191 DLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKL 250
+ MK+D EEE Y + Q+KL K LE L+++ GE++ D IE ELE +
Sbjct: 279 EFMKIDLEEECD-PPSYTAGQRKLRMKQLEQVLSKKLEEVEGEISSYQDAIEIELENSRP 337
Query: 251 ENEGQKCELWLCGCAFTLADVLLG 274
+ +G L G A L G
Sbjct: 338 KAKGGLASLAKDGSTEDTASSLCG 361
>gi|45827712 quaking homolog, KH domain RNA binding isoform HQK-7B
[Homo sapiens]
Length = 319
Score = 32.7 bits (73), Expect = 0.53
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 141 RVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEE 200
+++ ++L+ +LP G H E D I + +R+ + N T + E
Sbjct: 20 QLMNDKKLMSSLPNFC---GIFNHLERLLDEEISR-----VRKDMYNDTLNGSTEKRSAE 71
Query: 201 -PQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAE 244
P P + Q+KL + E+ D +++ +ILG + Q+EAE
Sbjct: 72 LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAE 116
>gi|45827710 quaking homolog, KH domain RNA binding isoform HQK-7
[Homo sapiens]
Length = 325
Score = 32.7 bits (73), Expect = 0.53
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 141 RVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEE 200
+++ ++L+ +LP G H E D I + +R+ + N T + E
Sbjct: 20 QLMNDKKLMSSLPNFC---GIFNHLERLLDEEISR-----VRKDMYNDTLNGSTEKRSAE 71
Query: 201 -PQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAE 244
P P + Q+KL + E+ D +++ +ILG + Q+EAE
Sbjct: 72 LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAE 116
>gi|45827708 quaking homolog, KH domain RNA binding isoform HQK-6
[Homo sapiens]
Length = 319
Score = 32.7 bits (73), Expect = 0.53
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 141 RVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEE 200
+++ ++L+ +LP G H E D I + +R+ + N T + E
Sbjct: 20 QLMNDKKLMSSLPNFC---GIFNHLERLLDEEISR-----VRKDMYNDTLNGSTEKRSAE 71
Query: 201 -PQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAE 244
P P + Q+KL + E+ D +++ +ILG + Q+EAE
Sbjct: 72 LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAE 116
>gi|45827706 quaking homolog, KH domain RNA binding isoform HQK-5
[Homo sapiens]
Length = 341
Score = 32.7 bits (73), Expect = 0.53
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 141 RVLQYRELLDALPMDAYTHGCILHPELTTDSMIPKYATAEIRRHLANATTDLMKLDHEEE 200
+++ ++L+ +LP G H E D I + +R+ + N T + E
Sbjct: 20 QLMNDKKLMSSLPNFC---GIFNHLERLLDEEISR-----VRKDMYNDTLNGSTEKRSAE 71
Query: 201 -PQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAE 244
P P + Q+KL + E+ D +++ +ILG + Q+EAE
Sbjct: 72 LPDAVGPIVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAE 116
>gi|24307971 serine/threonine kinase 38 like [Homo sapiens]
Length = 464
Score = 32.0 bits (71), Expect = 0.90
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 46 SLVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLGEEVPVIIHRD 105
+L+L H + +K+ + + E+GL EE+ + Q KE F+RL R
Sbjct: 34 NLILQHEERETRQKKLEVAMEEEGLADEEKKLRRSQHARKETEFLRLK----------RT 83
Query: 106 NIISDYDQIIDYVERTFTGEHVVALMPEVGSLQHARVLQYRELLD 150
+ D + + + R GE + + G + ++L+ ++L+
Sbjct: 84 RLGLDDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKSDMLE 128
>gi|226823235 regenerating islet-derived family, member 4 isoform 2
[Homo sapiens]
Length = 134
Score = 31.2 bits (69), Expect = 1.5
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 2 ATPNNLTPTNCSWWPISALESDAAKPAEAPDAPEAASPAHWPRESLVLYHWTQ------S 55
A NL P WP + D +P + D+ + P H+ + L L W + S
Sbjct: 54 AEVRNLLPA----WPGLSRAKDQPEPQISFDSGSSVLPGHYEEKPLWLVKWREEGCVFNS 109
Query: 56 FSSQKVRLVIAEKGLVCEERD 76
F+S + IAE G VC+ D
Sbjct: 110 FNS----VSIAEAGAVCQTLD 126
>gi|4758484 glutathione-S-transferase omega 1 [Homo sapiens]
Length = 241
Score = 31.2 bits (69), Expect = 1.5
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 36 AASPAHWPRESLVLYHWTQSFSSQKVRLVIAEKGLVCEERDVSLPQSEHKEPWFMRLNLG 95
+A P P S+ +Y +++ RLV+ KG+ E +++L ++K WF + N
Sbjct: 13 SAPPGPVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEVININL---KNKPEWFFKKNPF 69
Query: 96 EEVPVIIH-RDNIISDYDQIIDYVERTFTGEHVV 128
VPV+ + + +I + +Y++ + G+ ++
Sbjct: 70 GLVPVLENSQGQLIYESAITCEYLDEAYPGKKLL 103
>gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]
Length = 1493
Score = 31.2 bits (69), Expect = 1.5
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 153 PMDAYTHGCILHPELTTDSMIPKY----------ATAEIRRHLANAT-TDLMKLDHEEEP 201
P A +H I E TDS +P +T +R +N+ ++ M + E
Sbjct: 854 PKSASSHSDI---EEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAETVM 910
Query: 202 QLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWL 261
QL K+ KL LE ++ L +L ++++++E+EK K EN+ K E
Sbjct: 911 QLRNELRDKEMKLTDIRLEALSSAHQ---LDQLREAMNRMQSEIEKLKAENDRLKSESQG 967
Query: 262 CGCAFTLADVLLGAT 276
GC+ + V + A+
Sbjct: 968 SGCSRAPSQVSISAS 982
>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
Length = 2365
Score = 31.2 bits (69), Expect = 1.5
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 153 PMDAYTHGCILHPELTTDSMIPKY----------ATAEIRRHLANAT-TDLMKLDHEEEP 201
P A +H I E TDS +P +T +R +N+ ++ M + E
Sbjct: 1726 PKSASSHSDI---EEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAETVM 1782
Query: 202 QLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWL 261
QL K+ KL LE ++ L +L ++++++E+EK K EN+ K E
Sbjct: 1783 QLRNELRDKEMKLTDIRLEALSSAHQ---LDQLREAMNRMQSEIEKLKAENDRLKSESQG 1839
Query: 262 CGCAFTLADVLLGAT 276
GC+ + V + A+
Sbjct: 1840 SGCSRAPSQVSISAS 1854
>gi|161169013 neuron navigator 2 isoform 1 [Homo sapiens]
Length = 2432
Score = 31.2 bits (69), Expect = 1.5
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 153 PMDAYTHGCILHPELTTDSMIPKY----------ATAEIRRHLANAT-TDLMKLDHEEEP 201
P A +H I E TDS +P +T +R +N+ ++ M + E
Sbjct: 1793 PKSASSHSDI---EEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAETVM 1849
Query: 202 QLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWL 261
QL K+ KL LE ++ L +L ++++++E+EK K EN+ K E
Sbjct: 1850 QLRNELRDKEMKLTDIRLEALSSAHQ---LDQLREAMNRMQSEIEKLKAENDRLKSESQG 1906
Query: 262 CGCAFTLADVLLGAT 276
GC+ + V + A+
Sbjct: 1907 SGCSRAPSQVSISAS 1921
>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
Length = 2429
Score = 31.2 bits (69), Expect = 1.5
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 153 PMDAYTHGCILHPELTTDSMIPKY----------ATAEIRRHLANAT-TDLMKLDHEEEP 201
P A +H I E TDS +P +T +R +N+ ++ M + E
Sbjct: 1790 PKSASSHSDI---EEMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAETVM 1846
Query: 202 QLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAELEKRKLENEGQKCELWL 261
QL K+ KL LE ++ L +L ++++++E+EK K EN+ K E
Sbjct: 1847 QLRNELRDKEMKLTDIRLEALSSAHQ---LDQLREAMNRMQSEIEKLKAENDRLKSESQG 1903
Query: 262 CGCAFTLADVLLGAT 276
GC+ + V + A+
Sbjct: 1904 SGCSRAPSQVSISAS 1918
>gi|156546890 WW and C2 domain containing 2 [Homo sapiens]
Length = 1192
Score = 31.2 bits (69), Expect = 1.5
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 180 EIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLD 239
E +R +AN +L KLD E P + + K+K ++ ++ +++L EL V
Sbjct: 314 EAKRSMANLKIELSKLDSEAWPGALD--IEKEKLML--------INEKEELLKELQFVTP 363
Query: 240 QIEAELEKRKLENEGQKCE 258
Q + E +LE E Q+ E
Sbjct: 364 QKRTQDELERLEAERQRLE 382
>gi|210032790 hypothetical protein LOC27146 [Homo sapiens]
Length = 1060
Score = 30.4 bits (67), Expect = 2.6
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 186 ANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQIEAEL 245
A+A T+ MK +EE+ + + ++KK + L +KK E+ V +EAE
Sbjct: 395 ASAETEYMKQQYEEDLRKIKHQTEEEKKHLKDQLVKRLEDLVKKHTVEIKSVRSSVEAER 454
Query: 246 EKRKLENEGQ 255
+K + E E Q
Sbjct: 455 KKLQREVEAQ 464
>gi|89063265 PREDICTED: similar to MHC class I antigen [Homo
sapiens]
Length = 366
Score = 30.0 bits (66), Expect = 3.4
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 21 ESDAAKPAEAPDAP--EAASPAHWPRESLVLYHWTQSF 56
+SD+A P E P AP E P +W ++ ++ QSF
Sbjct: 74 DSDSANPREEPRAPWMEQEGPEYWDEQTRIVKDTAQSF 111
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 30.0 bits (66), Expect = 3.4
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 181 IRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLDQ 240
+++ L ++ + L+H E Q P L + +KL++K + +DVSYL L E L +
Sbjct: 1370 LQQKLESSQLQIAGLEHLRELQ---PKLDELQKLISK--KEEDVSYLSGQLSEKEAALTK 1424
Query: 241 IEAEL 245
I+ E+
Sbjct: 1425 IQTEI 1429
>gi|4504417 major histocompatibility complex, class I-related [Homo
sapiens]
Length = 341
Score = 29.3 bits (64), Expect = 5.8
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 16 PISALES-DAAKPAEAPDAPEAASPAHWPRESLVLYHWTQSFSSQKVRL 63
PI+ +S K AP E +P HW R + +L W Q F + RL
Sbjct: 54 PITTYDSVTRQKEPRAPWMAENLAPDHWERYTQLLRGWQQMFKVELKRL 102
>gi|54873602 hypothetical protein LOC220382 [Homo sapiens]
Length = 426
Score = 29.3 bits (64), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 18 SALESDAAKPAEAPDAPEAASPAH 41
SA ++ A +P AP AP A+PAH
Sbjct: 119 SAADTPAKRPLAAPSAPTVAAPAH 142
>gi|209863011 periostin, osteoblast specific factor isoform 3 [Homo
sapiens]
Length = 781
Score = 28.9 bits (63), Expect = 7.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 86 EPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYV 118
EP F + GE + +IH + II Y +IID V
Sbjct: 681 EPEFRLIKEGETITEVIHGEPIIKKYTKIIDGV 713
>gi|209862907 periostin, osteoblast specific factor isoform 1 [Homo
sapiens]
Length = 836
Score = 28.9 bits (63), Expect = 7.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 86 EPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYV 118
EP F + GE + +IH + II Y +IID V
Sbjct: 708 EPEFRLIKEGETITEVIHGEPIIKKYTKIIDGV 740
>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 28.9 bits (63), Expect = 7.6
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 14/160 (8%)
Query: 169 TDSMIPKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHD----DV 224
T+ IP+ AT+ + ++ T H E P S + + + D ++
Sbjct: 38 TNGSIPQTATSGGCQPPGDSATGF----HREGPTSSATLKDLESPCQERAVVLDSRSVEI 93
Query: 225 SYLKKILGELAMVLDQIEAEL-EKRKLENEGQKCE--LWLCGCAFTLADVLLGATLHRLK 281
S LK + L Q+E +L E++K N+ QK + L + + L L+ +K
Sbjct: 94 SQLKNTIKSLKQQKKQVEHQLEEEKKANNKKQKAKRVLEVQLQTLNIQKEELNTDLYHMK 153
Query: 282 FLGLSKKYWEDGSRPNLQSFFERVQRRFAFRKVLGDIHTT 321
S +Y+E+ S+ +QR+ VL D+ T
Sbjct: 154 ---RSLRYFEEKSKDLAVRLQHSLQRKGELESVLSDVMAT 190
>gi|20162564 tripartite motif-containing 40 [Homo sapiens]
Length = 229
Score = 28.9 bits (63), Expect = 7.6
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 164 HPELTTDSMIPKYATAEIRRH--LANATTDLMKLDHEEEPQLS--EPYLSKQKKLMAKIL 219
H ELT ++ + Y RR L +L +L ++E +L + +L + + + A+
Sbjct: 102 HHELTIENALSHYKERLNRRSRKLRKDIAELQRLKAQQEKKLQALQQWLGQLEHMPAEAA 161
Query: 220 EHDDVSYLKKILGELAMVLDQIEAELEKRKLENEG 254
D+S L L + L++ EL+ L+N G
Sbjct: 162 RILDISRAVTQLRSLVIDLERTAKELDTNTLKNAG 196
>gi|149158725 N-terminal EF-hand calcium binding protein 3 isoform 1
[Homo sapiens]
Length = 362
Score = 28.5 bits (62), Expect = 10.0
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Query: 174 PKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGE 233
P A E A D KL++E SK + + + L + VS L+ +
Sbjct: 108 PVLAALESLNRAVLAAMDATKLEYERA--------SKVDQFVTRFLLRETVSQLQALQSS 159
Query: 234 LAMVLDQIEAELEKRKLENEGQKCELWLCG 263
L D +EA+ + + E + + LCG
Sbjct: 160 LEGASDTLEAQAHGWRSDAESVEAQSRLCG 189
>gi|149158723 N-terminal EF-hand calcium binding protein 3 isoform 2
[Homo sapiens]
Length = 396
Score = 28.5 bits (62), Expect = 10.0
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Query: 174 PKYATAEIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGE 233
P A E A D KL++E SK + + + L + VS L+ +
Sbjct: 108 PVLAALESLNRAVLAAMDATKLEYERA--------SKVDQFVTRFLLRETVSQLQALQSS 159
Query: 234 LAMVLDQIEAELEKRKLENEGQKCELWLCG 263
L D +EA+ + + E + + LCG
Sbjct: 160 LEGASDTLEAQAHGWRSDAESVEAQSRLCG 189
>gi|38570149 WWC family member 3 [Homo sapiens]
Length = 1092
Score = 28.5 bits (62), Expect = 10.0
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 180 EIRRHLANATTDLMKLDHEEEPQLSEPYLSKQKKLMAKILEHDDVSYLKKILGELAMVLD 239
E R+ +AN L +LD+E P +E + + + K + +L EL +++
Sbjct: 240 EARKRVANIQQQLARLDNESWPSTAEADRDRLQLIKEK----------EALLQELQLIIA 289
Query: 240 QIEAELEKRKLENEGQKCE 258
Q + + +LE E ++ E
Sbjct: 290 QRRSAGDVARLEEERERLE 308
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,237,892
Number of Sequences: 37866
Number of extensions: 626934
Number of successful extensions: 2015
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1992
Number of HSP's gapped (non-prelim): 31
length of query: 367
length of database: 18,247,518
effective HSP length: 104
effective length of query: 263
effective length of database: 14,309,454
effective search space: 3763386402
effective search space used: 3763386402
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.